Sequence Length Modifications Modified sequence Oxidation (M) Probabilities Oxidation (M) Score Diffs Acetyl (Protein N-term) Oxidation (M) Missed cleavages Proteins Leading proteins Leading razor protein Gene names Protein names Type Raw file MS/MS m/z Charge m/z Mass Uncalibrated - Calibrated m/z [ppm] Uncalibrated - Calibrated m/z [Da] Mass error [ppm] Mass error [Da] Uncalibrated mass error [ppm] Uncalibrated mass error [Da] Max intensity m/z 0 Retention time Retention length Calibrated retention time Calibrated retention time start Calibrated retention time finish Retention time calibration Match time difference Match m/z difference Match q-value Match score Number of data points Number of scans Number of isotopic peaks PIF Fraction of total spectrum Base peak fraction PEP MS/MS count MS/MS scan number Score Delta score Combinatorics Intensity Reverse Potential contaminant id Protein group IDs Peptide ID Mod. peptide ID MS/MS IDs Best MS/MS Oxidation (M) site IDs Taxonomy IDs AAAAAAAAAAGAAGGR 16 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAAAAAAAAAGAAGGR_ 1 0 0 Q86U42 Q86U42 Q86U42 PABPN1 Polyadenylate-binding protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 620.824157714844 2 620.823275 1239.632 1.2259 0.00076109 0.56533 0.00035097 1.7913 0.0011121 620.823627862018 74.327 0.59734 74.327 74.007 74.604 0 26 11 3 0 0 0 1.3326E-05 1 83813 93.667 86.099 1 8427000 0 2574 0 0 0 0 AAAAAAAAAPAAAATAPTTAATTAATAAQ 29 Unmodified _AAAAAAAAAPAAAATAPTTAATTAATAAQ_ 0 0 0 P37108 P37108 P37108 SRP14 Signal recognition particle 14 kDa protein MULTI-MSMS 210214_Eclipse_Hela_QC 1185.11120605469 2 1184.60878 2367.20302 1.5975 0.0018925 -0.34779 -0.000412 1.2497 0.0014805 1185.10975092974 70.259 0.6467 70.259 69.924 70.571 0 57 12 6 0 0 0 0.019232 1 78089 30.133 24.854 1 43428000 1 1218 1 1 1 1 AAAAAAAAVPSAGPAGPAPTSAAGR 25 Unmodified _AAAAAAAAVPSAGPAGPAPTSAAGR_ 0 0 0 Q9Y4H2 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 MULTI-MSMS 210214_Eclipse_Hela_QC 1017.03533935547 2 1016.53215 2031.04975 1.1699 0.0011892 -0.44056 -0.00044784 0.72933 0.00074139 1017.53494268249 46.503 0.39808 46.503 46.329 46.727 0 18 7 3 0 0 0 1.3565E-06 1 44891 70.622 65.444 1 4122700 2 4088 2 2 2 2 AAAAAAAGDSDSWDADAFSVEDPVRK 26 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAAAAAAGDSDSWDADAFSVEDPVRK_ 1 0 1 O75822 O75822 O75822 EIF3J Eukaryotic translation initiation factor 3 subunit J MULTI-MSMS 210214_Eclipse_Hela_QC 1318.60327148438 2 1318.09898 2634.1834 2.7915 0.0036795 0.025679 3.3848E-05 2.8172 0.0037134 1318.60051292611 94.16 0.69594 94.16 93.836 94.532 0 61 13 6 0 0 0 3.8375E-19 1 111331 124.09 113.31 1 20165000 3 487 3 3 3 3 AAAAAAALQAK 11 Unmodified _AAAAAAALQAK_ 0 0 0 P36578 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 210214_Eclipse_Hela_QC 478.779815673828 2 478.779816 955.545079 0.0019744 9.4532E-07 -0.055706 -2.6671E-05 -0.053732 -2.5726E-05 478.779799628343 22.828 0.84737 22.828 22.603 23.451 0 48 16 4 0 0 0 1.6265E-10 2 11066 134.3 96.322 1 263080000 4 1208 4 4 4;5 5 AAAAAAGAASGLPGPVAQGLK 21 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAAAAAGAASGLPGPVAQGLK_ 1 0 0 Q96P70 Q96P70 Q96P70 IPO9 Importin-9 MULTI-MSMS 210214_Eclipse_Hela_QC 896.494018554688 2 895.9916 1789.96865 1.8442 0.0016524 -0.37311 -0.0003343 1.4711 0.0013181 896.492385617566 94.107 0.79568 94.107 93.588 94.383 0 51 15 5 0 0 0 8.2109E-29 1 111318 158.4 152.3 1 13756000 5 3109 5 5 6 6 AAAAAAGAGPEMVR 14 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAAAAAGAGPEMVR_ 1 0 0 P28482 P28482 P28482 MAPK1 Mitogen-activated protein kinase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 642.822631835938 2 642.821886 1283.62922 0.16673 0.00010718 0.78082 0.00050193 0.94754 0.0006091 642.822014860819 61.852 0.49538 61.852 61.591 62.087 0 27 9 6 0 0 0 4.9965E-07 2 66446 111.06 101.47 1 5728000 6 1091 6 6 7;8 8 AAAAAATAAAAASIR 15 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAAAAATAAAAASIR_ 1 0 0 Q8WVM8 Q8WVM8 Q8WVM8 SCFD1 Sec1 family domain-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 650.824157714844 2 650.354408 1298.69426 1.4215 0.00092447 2.9485 0.0019176 4.37 0.002842 650.857547855548 93.097 1.0938 93.097 92.693 93.787 0 50 21 4 0 0 0 0.0003054 2 110340 59.426 49.054 1 6325900 7 2841 7 7 9;10 10 AAAAAATAPPSPGPAQPGPR 20 Unmodified _AAAAAATAPPSPGPAQPGPR_ 0 0 0 Q6SPF0 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 210214_Eclipse_Hela_QC 878.962951660156 2 878.460467 1754.90638 0.92456 0.00081219 0.59174 0.00051982 1.5163 0.001332 878.96229620373 31.808 0.39739 31.808 31.619 32.017 0 15 7 3 0 0 0 0.046162 1 24110 27.409 21.803 1 2132800 8 2472 8 8 11 11 AAAAAEQQQFYLLLGNLLSPDNVVR 25 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAAAAEQQQFYLLLGNLLSPDNVVR_ 1 0 0 O00410 O00410 O00410 IPO5 Importin-5 MULTI-MSMS 210214_Eclipse_Hela_QC 1372.72937011719 2 1372.22432 2742.43408 2.1722 0.0029808 0.88966 0.0012208 3.0619 0.0042016 1372.72671954251 113.53 0.24899 113.53 113.35 113.6 0 7 4 3 0 0 0 1.0788E-05 1 138341 67.358 63.187 1 4304400 9 154 9 9 12 12 AAAAAGTATSQR 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAAAAGTATSQR_ 1 0 0 Q9Y2Z0 Q9Y2Z0 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog MSMS 210214_Eclipse_Hela_QC 559.283508300781 2 559.283451 1116.55235 NaN NaN NaN NaN NaN NaN NaN 27.844 1 27.844 27.344 28.344 0 0 0 0 0.0010615 1 18344 76.282 51.463 1 10 4026 10 10 13 13 AAAAALSQQQSLQER 15 Unmodified _AAAAALSQQQSLQER_ 0 0 0 Q8WUQ7 Q8WUQ7 Q8WUQ7 CACTIN Cactin MULTI-MSMS 210214_Eclipse_Hela_QC 786.411682128906 2 786.410443 1570.80633 0.76289 0.00059995 0.11075 8.7094E-05 0.87364 0.00068704 786.410667540236 31.071 0.39838 31.071 30.873 31.271 0 15 7 3 0 0 0 0.0089613 1 23036 40.589 30.902 1 2182500 11 2830 11 11 14 14 AAAAAWEEPSSGNGTAR 17 Unmodified _AAAAAWEEPSSGNGTAR_ 0 0 0 Q9P258 Q9P258 Q9P258 RCC2 Protein RCC2 MULTI-MSMS 210214_Eclipse_Hela_QC 823.383422851562 2 823.381882 1644.74921 1.0123 0.00083349 0.17019 0.00014014 1.1825 0.00097362 823.381209494494 32.088 1.4124 32.088 31.619 33.032 0 73 28 4 0 0 0 9.3483E-12 1 24332 122.33 113.37 1 30645000 12 3795 12 12 15 15 AAAAECDVVMAATEPELLDDQEAK 24 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAAAECDVVMAATEPELLDDQEAK_ 1 0 0 Q99615 Q99615 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 MULTI-SECPEP 210214_Eclipse_Hela_QC 1295.32336425781 2 1295.08838 2588.1622 2.3562 0.0030515 -1.8843 -0.0024404 0.47187 0.00061112 1295.5879598022 108.43 0.24884 108.43 108.26 108.51 0 13 4 4 0 0 0 7.2418E-78 1 131226 208.47 200.49 1 12670000 13 3178 13 13 16 16 AAAAELSLLEK 11 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAAAELSLLEK_ 1 0 0 O43324 O43324 O43324 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 MULTI-MSMS 210214_Eclipse_Hela_QC 579.324584960938 2 579.324254 1156.63395 1.4891 0.00086265 -0.051088 -2.9596E-05 1.438 0.00083305 579.324289968472 102.5 0.69607 102.5 102.14 102.84 0 30 13 3 0 0 0 0.0073207 1 122908 46.158 42.412 1 1943200 14 299 14 14 17 17 AAAAELSLLEK 11 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAAAELSLLEK_ 1 0 0 O43324 O43324 O43324 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 MULTI-SECPEP 210214_Eclipse_Hela_QC 1158.07873535156 1 1157.64123 1156.63395 1.7676 0.0020463 0.0068343 7.9116E-06 1.7745 0.0020542 1157.64111584042 102.51 0.69607 102.51 102.14 102.84 0 38 13 4 0 0 0 0.0009041 1 122791 96.331 81.662 1 10284000 15 299 14 14 18 18 AAAASAAEAGIATTGTEDSDDALLK 25 Unmodified _AAAASAAEAGIATTGTEDSDDALLK_ 0 0 0 P55036 P55036 P55036 PSMD4 26S proteasome non-ATPase regulatory subunit 4 MULTI-MSMS 210214_Eclipse_Hela_QC 1160.55847167969 2 1160.56117 2319.10778 0.37604 0.00043642 -0.60022 -0.00069659 -0.22418 -0.00026017 1161.06215588067 68.95 0.82278 68.95 68.505 69.327 0 45 16 5 0 0 0 3.2273E-18 1 76378 128.9 122.6 1 25732000 16 1526 15 15 19 19 AAAAVGAGHGAGGPGAASSSGGAR 24 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAAAVGAGHGAGGPGAASSSGGAR_ 1 0 0 Q96K37 Q96K37 Q96K37 SLC35E1 Solute carrier family 35 member E1 MULTI-MSMS 210214_Eclipse_Hela_QC 953.961608886719 2 953.959351 1905.90415 0.79298 0.00075647 0.16134 0.00015392 0.95433 0.00091039 953.95969548813 28.844 0.66768 28.844 28.563 29.231 0 21 13 3 0 0 0 6.4786E-07 1 19725 74.769 65.814 1 4560300 17 3083 16 16 20 20 AAAAVSESWPELELAER 17 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAAAVSESWPELELAER_ 1 0 0 Q8N1G4 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 MULTI-MSMS 210214_Eclipse_Hela_QC 935.96484375 2 935.962705 1869.91086 1.5705 0.0014699 0.60498 0.00056624 2.1754 0.0020361 935.963180505186 108.03 0.49853 108.03 107.86 108.36 0 21 9 4 0 0 0 1.4825E-35 1 130747 178.32 160.96 1 23394000 18 2671 17 17 21 21 AAAAVVEFQR 10 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAAAVVEFQR_ 1 0 0 O00231 O00231 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 MULTI-MSMS 210214_Eclipse_Hela_QC 552.796997070312 2 552.29583 1102.57711 0.34499 0.00019053 0.16931 9.3507E-05 0.51429 0.00028404 552.29588489522 79.88 0.74667 79.88 79.513 80.259 0 34 14 3 0 0 0 8.3666E-05 1 91583 101.54 85.88 1 10207000 19 139 18 18 22 22 AAAAVVVPAEWIK 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAAAVVVPAEWIK_ 1 0 0 Q8NI27 Q8NI27 Q8NI27 THOC2 THO complex subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 683.890869140625 2 683.890095 1365.76564 1.6327 0.0011166 -1.2813 -0.0008763 0.35138 0.00024031 683.889298455849 108.38 0.29862 108.38 108.16 108.46 0 9 5 2 0 0 0 0.00098732 1 131218 65.347 41.004 1 3563300 20 2780 19 19 23 23 AAADGDDSLYPIAVLIDELR 20 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAADGDDSLYPIAVLIDELR_ 1 0 0 P30153 P30153 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform MULTI-MSMS 210214_Eclipse_Hela_QC 1080.04858398438 2 1080.04697 2158.07938 1.1907 0.001286 0.097106 0.00010488 1.2878 0.0013909 1080.5484556182 113.68 0.3806 113.68 113.55 113.93 0 26 7 5 0 0 0 2.1951E-28 1 138508 191.49 182.44 1 27464000 21 1121 20 20 24 24 AAADTLQGPMQAAYR 15 Unmodified _AAADTLQGPMQAAYR_ 0 0 0 Q6P2E9 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 MULTI-MSMS 210214_Eclipse_Hela_QC 782.384460449219 2 782.382839 1562.75113 1.1393 0.00089135 0.10525 8.2344E-05 1.2445 0.0009737 782.382742587252 53.067 0.54866 53.067 52.743 53.291 0 19 10 2 0 0 0 0.00017637 1 54087 73.067 62.543 1 6202800 22 2449 21 21 25 25 AAAEDVNVTFEDQQK 15 Unmodified _AAAEDVNVTFEDQQK_ 0 0 0 Q9NQP4 Q9NQP4 Q9NQP4 PFDN4 Prefoldin subunit 4 MULTI-MSMS 210214_Eclipse_Hela_QC 832.893005371094 2 832.891748 1663.76894 0.94357 0.00078589 0.11327 9.4343E-05 1.0568 0.00088024 832.891879975073 46.774 0.99461 46.774 46.13 47.125 0 54 19 5 0 0 0 3.0813E-07 1 45095 131.37 131.37 1 43984000 23 3599 22 22 26 26 AAAEQAISVR 10 Unmodified _AAAEQAISVR_ 0 0 0 Q01780 Q01780 Q01780 EXOSC10 Exosome component 10 MSMS 210214_Eclipse_Hela_QC 508.279998779297 2 508.28018 1014.54581 NaN NaN NaN NaN NaN NaN NaN 25.853 1 25.853 25.353 26.353 0 0 0 0 0.032199 1 15480 51.63 7.822 1 24 1820 23 23 27 27 AAAEVAGQFVIK 12 Unmodified _AAAEVAGQFVIK_ 0 0 0 P02786 P02786 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form MULTI-MSMS 210214_Eclipse_Hela_QC 602.340759277344 2 602.340238 1202.66592 0.75217 0.00045306 0.15784 9.5074E-05 0.91001 0.00054813 602.340324166703 56.442 1.0943 56.442 56.118 57.213 0 56 21 3 0 0 0 1.9475E-11 2 58925 140.05 102.33 1 100410000 25 645 24 24 28;29 28 AAAEVNQDYGLDPK 14 Unmodified _AAAEVNQDYGLDPK_ 0 0 0 P07954 P07954 P07954 FH Fumarate hydratase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 746.362670898438 2 745.85972 1489.70489 0.89961 0.00067099 -0.11997 -8.9478E-05 0.77965 0.00058151 745.859635142846 42.213 0.89219 42.213 41.904 42.796 0 60 17 5 0 0 0 0.00017457 1 38561 91.937 77.247 1 116160000 26 735 25 25 30 30 AAAFEASGALAAVATAMPAEHVAVQVPAPEPTPGPVR 37 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAAFEASGALAAVATAMPAEHVAVQVPAPEPTPGPVR_ 1 0 0 Q9UHI6 Q9UHI6 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 MULTI-MSMS 210214_Eclipse_Hela_QC 1199.29113769531 3 1198.61888 3592.8348 0.73737 0.00088383 0.24439 0.00029293 0.98176 0.0011768 1199.28796919002 108.78 0.24844 108.78 108.61 108.85 0 13 4 5 0 0 0 2.2825E-05 1 131752 41.27 39.388 1 5630200 27 3866 26 26 31 31 AAAFEEQENETVVVK 15 Unmodified _AAAFEEQENETVVVK_ 0 0 0 Q9Y490 Q9Y490 Q9Y490 TLN1 Talin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 832.413635253906 2 832.412317 1662.81008 1.1861 0.00098732 0.15255 0.00012698 1.3386 0.0011143 832.412415504227 48.462 0.66885 48.462 48.17 48.839 0 36 13 4 0 0 0 3.846E-05 1 47564 115.18 102.96 1 14537000 28 4084 27 27 32 32 AAAFEQLQK 9 Unmodified _AAAFEQLQK_ 0 0 0 O94826 O94826 O94826 TOMM70A Mitochondrial import receptor subunit TOM70 MULTI-MSMS 210214_Eclipse_Hela_QC 503.272216796875 2 503.271824 1004.5291 0.46706 0.00023506 1.0646 0.00053579 1.5317 0.00077085 503.272505705686 30.448 0.84711 30.448 29.976 30.823 0 24 16 2 0 0 0 4.2019E-06 1 21996 144.38 104.83 1 18291000 29 516 28 28 33 33 AAAGAAATHLEVAR 14 Unmodified _AAAGAAATHLEVAR_ 0 0 0 Q96S52 Q96S52 Q96S52 PIGS GPI transamidase component PIG-S MSMS 210214_Eclipse_Hela_QC 654.85498046875 2 654.854575 1307.6946 NaN NaN NaN NaN NaN NaN NaN 24.936 1 24.936 24.436 25.436 0 0 0 0 2.8519E-06 1 14180 91.855 59.014 1 30 3130 29 29 34 34 AAAGDLGGDHLAFSCDVAK 19 Unmodified _AAAGDLGGDHLAFSCDVAK_ 0 0 0 Q8N4T8 Q8N4T8 Q8N4T8 CBR4 Carbonyl reductase family member 4 MULTI-MSMS 210214_Eclipse_Hela_QC 625.962646484375 3 625.62823 1873.86286 1.2096 0.00075675 0.34116 0.00021344 1.5507 0.00097019 625.628407635594 55.745 0.49739 55.745 55.471 55.969 0 14 9 2 0 0 0 0.019873 1 57911 23.293 18.584 1 6730200 31 2688 30 30 35 35 AAAGELQEDSGLCVLAR 17 Unmodified _AAAGELQEDSGLCVLAR_ 0 0 0 Q96C19 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 MULTI-MSMS 210214_Eclipse_Hela_QC 880.436584472656 2 880.4358 1758.85705 0.7868 0.00069273 0.054483 4.7968E-05 0.84129 0.0007407 880.435834466574 69.686 0.64648 69.686 69.377 70.024 0 44 12 5 0 0 0 2.2137E-12 1 77288 131.37 107.76 1 25956000 32 2982 31 31 36 36 AAAIGIDLGTTYSCVGVFQHGK 22 Unmodified _AAAIGIDLGTTYSCVGVFQHGK_ 0 0 0 P0DMV9;P0DMV8 P0DMV9 P0DMV9 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 756.051513671875 3 755.715927 2264.12595 0.96449 0.00072888 -0.023365 -1.7658E-05 0.94113 0.00071122 756.050298730031 83.877 1.9406 83.877 83.454 85.395 0 107 38 6 0 0 0 3.0738E-29 3 97121 155.49 155.49 1 174280000 33 792 32 32 37;38;39 37 AAAIGIDLGTTYSCVGVFQHGK 22 Unmodified _AAAIGIDLGTTYSCVGVFQHGK_ 0 0 0 P0DMV9;P0DMV8 P0DMV9 P0DMV9 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 1133.57202148438 2 1133.07025 2264.12595 0.49007 0.00055529 -0.70173 -0.00079511 -0.21166 -0.00023983 1134.07085713639 83.878 0.39857 83.878 83.653 84.052 0 19 7 4 0 0 0 5.1898E-05 1 97237 83.769 78.967 1 4487900 34 792 32 32 40 40 AAAITSDILETLGR 14 Unmodified _AAAITSDILETLGR_ 0 0 0 CON__Q2KJC7 CON__Q2KJC7 CON__Q2KJC7 MULTI-MSMS 210214_Eclipse_Hela_QC 715.897338867188 2 715.896106 1429.77766 1.5734 0.0011264 -0.087809 -6.2862E-05 1.4856 0.0010635 715.895989771237 93.662 0.99456 93.662 93.339 94.334 0 70 19 5 0 0 0 0.00017514 1 110652 74.698 63.13 1 39322000 + 35 89 33 33 41 41 AAALASGCTVEIK 13 Unmodified _AAALASGCTVEIK_ 0 0 0 Q8IYS1 Q8IYS1 Q8IYS1 PM20D2 Peptidase M20 domain-containing protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 646.3408203125 2 645.839745 1289.66494 0.15856 0.0001024 -0.82497 -0.0005328 -0.66641 -0.0004304 646.34015834143 41.159 0.94479 41.159 40.462 41.407 0 28 18 2 0 0 0 0.00016857 1 37295 82.417 58.262 1 13325000 36 2653 34 34 42 42 AAALEAMK 8 Unmodified _AAALEAMK_ 0 0 0 P31948 P31948 P31948 STIP1 Stress-induced-phosphoprotein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 402.718078613281 2 402.717839 803.421125 -0.23344 -9.4011E-05 0.3254 0.00013105 0.091962 3.7035E-05 402.717921219874 24.456 0.64357 24.456 24.172 24.815 0 31 12 3 0 0 0 0.0060102 1 13479 77.282 54.246 1 49209000 37 1153 35 35 43 43 AAALEFLNR 9 Unmodified _AAALEFLNR_ 0 0 0 P31948 P31948 P31948 STIP1 Stress-induced-phosphoprotein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 502.779937744141 2 502.779816 1003.54508 0.92758 0.00046637 0.59361 0.00029846 1.5212 0.00076483 502.779757837957 60.477 1.3931 60.477 59.8 61.193 0 80 27 5 0 0 0 4.184E-07 2 64315 150.17 116.61 1 88087000 38 1153 36 36 44;45 44 AAALEQFK 8 Unmodified _AAALEQFK_ 0 0 0 Q13423 Q13423 Q13423 NNT NAD(P) transhydrogenase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 439.24267578125 2 439.242535 876.470518 0.18511 8.131E-05 0.15452 6.7872E-05 0.33963 0.00014918 439.242583293697 30.15 0.64664 30.15 29.877 30.524 0 26 12 3 0 0 0 0.056417 1 21520 39.298 16.261 1 14960000 39 1982 37 37 46 46 AAANFFSASCVPCADQSSFPK 21 Unmodified _AAANFFSASCVPCADQSSFPK_ 0 0 0 CON__Q0IIK2;CON__Q29443 CON__Q0IIK2 CON__Q0IIK2 MULTI-MSMS 210214_Eclipse_Hela_QC 1132.00476074219 2 1131.50135 2260.98814 0.94929 0.0010741 0.062364 7.0565E-05 1.0117 0.0011447 1132.00305260683 81.18 0.79552 81.18 80.854 81.65 0 62 15 6 0 0 0 2.2064E-06 1 93583 84.508 77.626 1 27943000 + 40 77 38 38 47 47 AAAPAPVSEAVCR 13 Unmodified _AAAPAPVSEAVCR_ 0 0 0 P20810 P20810 P20810 CAST Calpastatin MULTI-MSMS 210214_Eclipse_Hela_QC 649.830505371094 2 649.829711 1297.64487 0.62438 0.00040574 0.0038923 2.5293E-06 0.62827 0.00040827 649.829954338541 34.821 0.75393 34.821 34.539 35.293 0 34 15 3 0 0 0 0.00094438 2 28240 62.633 50.426 1 18240000 41 985 39 39 48;49 49 AAAPGVEDEPLLR 13 Unmodified _AAAPGVEDEPLLR_ 0 0 0 P31350 P31350 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 MSMS 210214_Eclipse_Hela_QC 669.357177734375 2 669.356616 1336.69868 NaN NaN NaN NaN NaN NaN NaN 55.959 1 55.959 55.459 56.459 0 0 0 0 0.0021128 1 58249 70.977 54.201 1 42 1142 40 40 50 50 AAAPQAWAGPMEEPPQAQAPPR 22 Unmodified _AAAPQAWAGPMEEPPQAQAPPR_ 0 0 0 Q16643 Q16643 Q16643 DBN1 Drebrin MULTI-MSMS 210214_Eclipse_Hela_QC 1136.55395507812 2 1136.05239 2270.09024 0.13501 0.00015338 0.056024 6.3646E-05 0.19104 0.00021703 1136.55410141378 66.151 0.64719 66.151 65.851 66.498 0 42 12 4 0 0 0 0.00098435 1 72426 46.964 45.199 1 4430900 43 2242 41 41 51 51 AAAQCYIDLIIK 12 Unmodified _AAAQCYIDLIIK_ 0 0 0 P53618 P53618 P53618 COPB1 Coatomer subunit beta MULTI-MSMS 210214_Eclipse_Hela_QC 689.8740234375 2 689.873588 1377.73262 1.0949 0.00075535 -0.037393 -2.5797E-05 1.0575 0.00072955 689.873737357098 90.275 0.74539 90.275 89.909 90.654 0 39 14 4 0 0 0 0.00071332 1 106006 67.726 48.946 1 10421000 44 1500 42 42 52 52 AAAQEQYSAAVAR 13 Unmodified _AAAQEQYSAAVAR_ 0 0 0 CON__Q3T052 CON__Q3T052 CON__Q3T052 MULTI-MSMS 210214_Eclipse_Hela_QC 668.336303710938 2 668.336215 1334.65788 0.25062 0.0001675 -0.50837 -0.00033976 -0.25775 -0.00017227 668.335930993416 26.183 0.99567 26.183 25.86 26.856 0 61 19 5 0 0 0 9.5997E-19 1 15901 154 134.64 1 229930000 + 45 103 43 43 53 53 AAAQQLGEVVK 11 Unmodified _AAAQQLGEVVK_ 0 0 0 O14981 O14981 O14981 BTAF1 TATA-binding protein-associated factor 172 MULTI-MSMS 210214_Eclipse_Hela_QC 557.317077636719 2 557.316763 1112.61897 0.30694 0.00017106 -0.39106 -0.00021794 -0.084124 -4.6883E-05 557.3167687674 33.523 0.43864 33.523 33.279 33.718 0 14 8 2 0 0 0 0.027429 1 26446 38.303 14.148 1 4337100 46 230 44 44 54 54 AAASGQPRPEMQCPAEHEEDMYR 23 Unmodified _AAASGQPRPEMQCPAEHEEDMYR_ 0 0 1 Q96BN8 Q96BN8 Q96BN8 OTULIN Ubiquitin thioesterase otulin MULTI-MSMS 210214_Eclipse_Hela_QC 666.039245605469 4 665.787615 2659.12135 0.69084 0.00045995 1.1371 0.00075705 1.8279 0.001217 666.038479604308 33.438 1.0344 33.438 33.081 34.116 0 63 20 5 0 0 0 6.552E-05 1 26161 60.036 52.044 1 14010000 47 2976 45 45 55 55 AAASLAAVSGTAAASLGSAQPTDLGAHK 28 Unmodified _AAASLAAVSGTAAASLGSAQPTDLGAHK_ 0 0 0 Q7Z5L9 Q7Z5L9 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 832.437438964844 3 832.101386 2493.28233 1.3012 0.0010827 0.44318 0.00036877 1.7443 0.0014515 832.43608975944 71.259 0.64835 71.259 71.019 71.667 0 39 12 5 0 0 0 3.3601E-05 1 79691 53.705 50.739 1 9337600 48 2553 46 46 56 56 AAASMGDTLSEQQLGDSDIPVIVYR 25 Unmodified _AAASMGDTLSEQQLGDSDIPVIVYR_ 0 0 0 Q96P48 Q96P48 Q96P48 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1319.15185546875 2 1318.64725 2635.27995 1.7858 0.0023548 -0.9316 -0.0012284 0.85419 0.0011264 1319.64855262997 99.419 0.39743 99.419 99.257 99.655 0 17 7 3 0 0 0 0.00029183 2 118793 68.513 57.243 1 2687300 49 3108 47 47 57;58 57 AAATGAVAASAASGQAEGK 19 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAATGAVAASAASGQAEGK_ 1 0 0 Q9NWH9 Q9NWH9 Q9NWH9 SLTM SAFB-like transcription modulator MULTI-MSMS 210214_Eclipse_Hela_QC 815.906982421875 2 815.90519 1629.79583 1.3801 0.001126 1.7222 0.0014052 3.1023 0.0025312 815.906577498891 53.615 0.7966 53.615 53.341 54.138 0 40 15 3 0 0 0 5.9341E-27 3 55017 160.69 143.89 1 9355800 50 3702 48 48 59;60;61 61 AAATGPSFWLGNETLK 16 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAATGPSFWLGNETLK_ 1 0 0 P12955 P12955 P12955 PEPD Xaa-Pro dipeptidase MULTI-MSMS 210214_Eclipse_Hela_QC 853.436279296875 2 852.933219 1703.85189 0.94809 0.00080865 -0.24465 -0.00020867 0.70344 0.00059999 852.933102789742 107.24 0.24894 107.24 107.06 107.31 0 11 4 3 0 0 0 8.1091E-07 1 129633 117.79 100.88 1 17696000 51 854 49 49 62 62 AAAVAAAGAGEPQSPDELLPK 21 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAAVAAAGAGEPQSPDELLPK_ 1 0 0 Q9NS69 Q9NS69 Q9NS69 TOMM22 Mitochondrial import receptor subunit TOM22 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 1003.51837158203 2 1003.01547 2004.01638 1.6805 0.0016856 -0.25897 -0.00025976 1.4215 0.0014258 1003.51676579466 99.729 1.3426 99.729 98.909 100.25 0 39 26 2 0 0 0 8.1838E-12 1 119157 117.92 110 1 15250000 52 3638 50 50 63 63 AAAVLPVLDLAQR 13 Unmodified _AAAVLPVLDLAQR_ 0 0 0 P19404 P19404 P19404 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 668.901245117188 2 668.900994 1335.78744 1.2566 0.00084056 -0.12944 -8.658E-05 1.1272 0.00075398 668.90086269413 90.463 0.84496 90.463 90.008 90.853 0 48 16 4 0 0 0 0.00075805 1 106090 79.974 73.371 1 17161000 53 967 51 51 64 64 AAAVLSGPSAGSAAGVPGGTGGLSAVSSGPR 31 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAAVLSGPSAGSAAGVPGGTGGLSAVSSGPR_ 1 0 0 Q8IZL8 Q8IZL8 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1305.17224121094 2 1304.6699 2607.32526 1.6884 0.0022028 -0.12477 -0.00016279 1.5637 0.00204 1305.17137472238 99.41 0.49736 99.41 99.108 99.605 0 20 9 3 0 0 0 1.1677E-19 1 118682 106.67 99.074 1 4560300 54 2660 52 52 65 65 AAAVPVEFQEHHLSEVQNMASEEK 24 Unmodified _AAAVPVEFQEHHLSEVQNMASEEK_ 0 0 0 O43837 O43837 O43837 IDH3B Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 671.073120117188 4 670.822246 2679.25988 0.84497 0.00056683 -0.35875 -0.00024066 0.48622 0.00032617 671.323069916246 59.993 0.89725 59.993 59.651 60.548 0 57 17 6 0 0 0 0.026803 1 63741 20.757 18.444 1 25289000 55 345 53 53 66 66 AAAVVGINSETIMK 14 Unmodified _AAAVVGINSETIMK_ 0 0 0 P13995 P13995 P13995 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase MULTI-MSMS 210214_Eclipse_Hela_QC 702.381164550781 2 702.381777 1402.749 1.2138 0.00085258 -1.2537 -0.00088059 -0.039871 -2.8005E-05 702.380358721702 60.225 0.99544 60.225 59.999 60.995 0 41 19 3 0 0 0 0.0007826 1 64312 60.641 47.05 1 15536000 56 873 54 54 67 67 AAAYSAQVQPVDGATR 16 Unmodified _AAAYSAQVQPVDGATR_ 0 0 0 Q9H7E9 Q9H7E9 Q9H7E9 C8orf33 UPF0488 protein C8orf33 MULTI-MSMS 210214_Eclipse_Hela_QC 802.906066894531 2 802.904993 1603.79543 1.0365 0.00083223 -0.11265 -9.0446E-05 0.92387 0.00074178 802.905005316822 36.888 0.63895 36.888 36.621 37.26 0 27 12 4 0 0 0 4.6051E-05 1 31260 88.338 76.472 1 11354000 57 3499 55 55 68 68 AACDLVR 7 Unmodified _AACDLVR_ 0 0 0 P55060 P55060 P55060 CSE1L Exportin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 402.705230712891 2 402.705263 803.395972 -0.086354 -3.4775E-05 -0.27309 -0.00010997 -0.35944 -0.00014475 402.705279826143 22.678 0.54817 22.678 22.454 23.002 0 20 10 4 0 0 0 0.0028936 1 10888 113.08 72.163 1 34789000 58 1529 56 56 69 69 AACEQQAVALTLQEDR 16 Unmodified _AACEQQAVALTLQEDR_ 0 0 0 Q9BUH6 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX MULTI-MSMS 210214_Eclipse_Hela_QC 902.44091796875 2 901.938707 1801.86286 1.1929 0.0010759 0.11671 0.00010526 1.3096 0.0011812 901.938874064332 58.31 0.49784 58.31 58.009 58.507 0 33 9 4 0 0 0 3.5616E-07 1 61348 102.66 93.229 1 10942000 59 3287 57 57 70 70 AACLCFR 7 Unmodified _AACLCFR_ 0 0 0 O95989;A0A024RBG1;Q96G61;Q8NFP7;Q9NZJ9 O95989 O95989 NUDT3;NUDT4;NUDT11;NUDT10 Diphosphoinositol polyphosphate phosphohydrolase 1;Diphosphoinositol polyphosphate phosphohydrolase 3-beta;Diphosphoinositol polyphosphate phosphohydrolase 3-alpha;Diphosphoinositol polyphosphate phosphohydrolase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 449.206939697266 2 449.207115 896.399678 0.11886 5.3391E-05 -1.0412 -0.00046771 -0.92234 -0.00041432 449.20698333926 33.209 0.69118 33.209 32.884 33.576 0 26 13 3 0 0 0 0.0097606 1 25869 80.377 76.16 1 6222500 60 611 58 58 71 71 AACLLDGVPVALK 13 Unmodified _AACLLDGVPVALK_ 0 0 0 Q8TDX7 Q8TDX7 Q8TDX7 NEK7 Serine/threonine-protein kinase Nek7 MULTI-MSMS 210214_Eclipse_Hela_QC 664.378051757812 2 663.87613 1325.73771 0.85525 0.00056778 -0.74755 -0.00049628 0.1077 7.1497E-05 663.875864380627 83.11 0.54817 83.11 82.757 83.306 0 23 9 3 0 0 0 0.0025474 1 96239 52.79 41.427 1 9995600 61 2807 59 59 72 72 AADAEAEVASLNR 13 Unmodified _AADAEAEVASLNR_ 0 0 0 P06753 P06753 P06753 TPM3 Tropomyosin alpha-3 chain MULTI-MSMS 210214_Eclipse_Hela_QC 658.826721191406 2 658.82568 1315.63681 -0.10002 -6.5893E-05 0.2178 0.00014349 0.11778 7.7597E-05 658.825853604517 35.857 0.88156 35.857 35.49 36.372 0 60 17 5 0 0 0 2.1534E-29 1 29502 185.29 120.14 1 290240000 62 707 60 60 73 73 AADAEAEVASLNRR 14 Unmodified _AADAEAEVASLNRR_ 0 0 1 P06753 P06753 P06753 TPM3 Tropomyosin alpha-3 chain MULTI-MSMS 210214_Eclipse_Hela_QC 491.587249755859 3 491.586583 1471.73792 0.30317 0.00014904 -0.089968 -4.4227E-05 0.21321 0.00010481 491.586572137686 27.667 0.34281 27.667 27.502 27.845 0 15 6 3 0 0 0 0.0023395 1 18080 39.509 25.846 1 7928500 63 707 61 61 74 74 AADCDLQITNAQTK 14 Unmodified _AADCDLQITNAQTK_ 0 0 0 Q7Z6E9 Q7Z6E9 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 MULTI-MSMS 210214_Eclipse_Hela_QC 774.871215820312 2 774.869762 1547.72497 0.65576 0.00050813 0.36917 0.00028606 1.0249 0.00079418 774.870152404468 35.714 0.48398 35.714 35.441 35.925 0 15 9 2 0 0 0 0.012839 1 29520 38.634 23.044 1 6112900 64 2554 62 62 75 75 AADCEVEQWDSDEPIPAK 18 Unmodified _AADCEVEQWDSDEPIPAK_ 0 0 0 Q9UBQ7 Q9UBQ7 Q9UBQ7 GRHPR Glyoxylate reductase/hydroxypyruvate reductase MULTI-MSMS 210214_Eclipse_Hela_QC 1030.951171875 2 1030.4493 2058.88405 1.2065 0.0012432 -0.16968 -0.00017485 1.0368 0.0010684 1030.44898235538 65.18 0.59801 65.18 64.905 65.503 0 42 11 5 0 0 0 0.0036942 1 71074 42.095 42.095 1 22231000 65 3827 63 63 76 76 AADCISEPVNR 11 Unmodified _AADCISEPVNR_ 0 0 0 P43304 P43304 P43304 GPD2 Glycerol-3-phosphate dehydrogenase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 616.290710449219 2 616.290419 1230.56629 -0.0098587 -6.0758E-06 -0.15626 -9.6302E-05 -0.16612 -0.00010238 616.290333740782 26.083 0.39842 26.083 25.91 26.308 0 12 7 2 0 0 0 0.019491 1 15862 43.512 22.611 1 5561800 66 1290 64 64 77 77 AADEEAFEDNSEEYIR 16 Unmodified _AADEEAFEDNSEEYIR_ 0 0 0 P55060 P55060 P55060 CSE1L Exportin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 944.401489257812 2 944.397592 1886.78063 1.009 0.00095286 -0.02825 -2.6679E-05 0.98071 0.00092618 944.397554489249 61.169 0.74549 61.169 60.896 61.641 0 57 14 5 0 0 0 5.6947E-23 2 65384 160.15 152.02 1 77899000 67 1529 65 65 78;79 78 AADEEAFEDNSEEYIRR 17 Unmodified _AADEEAFEDNSEEYIRR_ 0 0 1 P55060 P55060 P55060 CSE1L Exportin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 681.968811035156 3 681.967857 2042.88174 1.2097 0.00082495 -0.17442 -0.00011895 1.0352 0.000706 681.967680934187 50.409 0.49807 50.409 50.13 50.628 0 30 9 4 0 0 0 0.03182 1 50344 28.627 26.699 1 10518000 68 1529 66 66 80 80 AADFLSEPEGGPEMAK 16 Unmodified _AADFLSEPEGGPEMAK_ 0 0 0 Q63HN8 Q63HN8 Q63HN8 RNF213 E3 ubiquitin-protein ligase RNF213 MULTI-MSMS 210214_Eclipse_Hela_QC 824.880554199219 2 824.879795 1647.74504 1.219 0.0010055 -0.15187 -0.00012528 1.0671 0.00088026 824.87972099985 62.693 0.34788 62.693 62.528 62.876 0 13 6 3 0 0 0 0.03313 1 67817 32.946 27.963 1 2749700 69 2391 67 67 81 81 AADFQLHTHVNDGTEFGGSIYQK 23 Unmodified _AADFQLHTHVNDGTEFGGSIYQK_ 0 0 0 Q9Y277 Q9Y277 Q9Y277 VDAC3 Voltage-dependent anion-selective channel protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 634.803894042969 4 634.55293 2534.18262 0.77799 0.00049367 0.26631 0.00016899 1.0443 0.00066266 634.803837420684 58.333 1.4922 58.333 58.009 59.501 0 98 29 6 0 0 0 2.7548E-07 1 61522 81.922 79.345 1 42128000 70 3994 68 68 82 82 AADFSDPAFLAHTNR 15 Unmodified _AADFSDPAFLAHTNR_ 0 0 0 CON__ENSEMBL:ENSBTAP00000018574 CON__ENSEMBL:ENSBTAP00000018574 CON__ENSEMBL:ENSBTAP00000018574 MULTI-MSMS 210214_Eclipse_Hela_QC 544.930541992188 3 544.930349 1631.76922 0.96853 0.00052778 0.18452 0.00010055 1.153 0.00062833 544.930458425898 56.691 0.84547 56.691 56.318 57.163 0 32 16 2 0 0 0 2.6377E-07 2 59063 104.55 97.51 1 81161000 + 71 36 69 69 83;84 83 AADFSDPAFLAHTNR 15 Unmodified _AADFSDPAFLAHTNR_ 0 0 0 CON__ENSEMBL:ENSBTAP00000018574 CON__ENSEMBL:ENSBTAP00000018574 CON__ENSEMBL:ENSBTAP00000018574 MULTI-MSMS 210214_Eclipse_Hela_QC 817.394775390625 2 816.891886 1631.76922 1.2743 0.0010409 0.55554 0.00045382 1.8298 0.0014948 816.892577426446 56.673 0.49757 56.673 56.417 56.915 0 12 9 2 0 0 0 0.00051851 1 59187 68.44 52.811 1 5204600 + 72 36 69 69 85 85 AADIAEALYSVPR 13 Unmodified _AADIAEALYSVPR_ 0 0 0 Q9HAK2;Q9UH73;Q9H4W6 Q9HAK2 Q9HAK2 EBF2;EBF1;EBF3 Transcription factor COE2;Transcription factor COE1;Transcription factor COE3 MULTI-MSMS 210214_Eclipse_Hela_QC 459.580078125 3 459.245386 1374.71433 0.32519 0.00014934 0.79699 0.00036602 1.1222 0.00051536 459.245832253349 45.011 0.54771 45.011 44.736 45.284 0 17 10 2 0 0 0 0.059117 1 42838 14.353 3.1402 1 4345400 73 3534 70 70 86 86 AADIDQEVK 9 Unmodified _AADIDQEVK_ 0 0 0 Q86VP6 Q86VP6 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 494.750762939453 2 494.750921 987.48729 0.45321 0.00022423 0.009472 4.6863E-06 0.46268 0.00022891 494.750871494234 23.042 0.49835 23.042 22.753 23.251 0 22 9 3 0 0 0 7.0026E-06 1 11445 140.09 90.499 1 24891000 74 2587 71 71 87 87 AADISESSGADCK 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AADISESSGADCK_ 1 0 0 O43583 O43583 O43583 DENR Density-regulated protein MULTI-MSMS 210214_Eclipse_Hela_QC 676.786499023438 2 676.785363 1351.55617 0.36874 0.00024956 -0.042126 -2.851E-05 0.32661 0.00022105 676.785335858132 38.491 0.59233 38.491 38.193 38.785 0 29 11 3 0 0 0 0.0029132 1 33392 49.189 43.086 1 7966700 75 313 72 72 88 88 AADISLDNLVEGK 13 Unmodified _AADISLDNLVEGK_ 0 0 0 Q12888 Q12888 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 672.855834960938 2 672.853906 1343.69326 0.73381 0.00049375 0.141 9.4869E-05 0.87481 0.00058862 672.854062257966 76.913 1.0451 76.913 76.328 77.373 0 53 20 4 0 0 0 0.0012298 1 87333 59.542 42.516 1 15156000 76 1918 73 73 89 89 AADLLVNPLDPR 12 Unmodified _AADLLVNPLDPR_ 0 0 0 P78362 P78362 P78362 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal MULTI-MSMS 210214_Eclipse_Hela_QC 647.361328125 2 647.361702 1292.70885 0.22642 0.00014658 -1.4469 -0.00093667 -1.2205 -0.0007901 647.360767364213 82.356 0.72502 82.356 81.948 82.673 0 28 15 3 0 0 0 0.00034736 1 95196 76.465 28.642 1 5867200 77 1748 74 74 90 90 AADLLYAMCDR 11 Unmodified _AADLLYAMCDR_ 0 0 0 O95782 O95782 O95782 AP2A1 AP-2 complex subunit alpha-1 MSMS 210214_Eclipse_Hela_QC 649.797485351562 2 649.797023 1297.57949 NaN NaN NaN NaN NaN NaN NaN 68.2 1 68.2 67.7 68.7 0 0 0 0 0.0044124 1 75424 72.006 60.841 1 78 594 75 75 91 91 AADLQLEMTQK 11 Unmodified _AADLQLEMTQK_ 0 0 0 O15382 O15382 O15382 BCAT2 Branched-chain-amino-acid aminotransferase, mitochondrial MSMS 210214_Eclipse_Hela_QC 624.319458007812 2 624.318645 1246.62274 NaN NaN NaN NaN NaN NaN NaN 46.325 1 46.325 45.825 46.825 0 0 0 0 0.00074299 1 44646 104.42 81.643 1 79 270 76 76 92 92 AADPPAENSSAPEAEQGGAE 20 Unmodified _AADPPAENSSAPEAEQGGAE_ 0 0 0 P67809 P67809 P67809 YBX1 Nuclease-sensitive element-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 949.908447265625 2 949.405948 1896.79734 1.0315 0.00097934 0.075163 7.136E-05 1.1067 0.0010507 949.405985216289 31.88 0.9904 31.88 31.421 32.411 0 67 19 5 0 0 0 9.6907E-05 1 23808 65.495 61.481 1 56933000 80 1723 77 77 93 93 AADSICDGDLVDSQIR 16 Unmodified _AADSICDGDLVDSQIR_ 0 0 0 P35251 P35251 P35251 RFC1 Replication factor C subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 867.902465820312 2 867.90179 1733.78903 1.1038 0.000958 -0.10362 -8.9931E-05 1.0002 0.00086807 867.902158645608 63.93 0.44829 63.93 63.722 64.17 0 25 8 4 0 0 0 9.4857E-06 1 69358 99.215 92.682 1 5897300 81 1184 78 78 94 94 AADSQNSGEGNTGAAESSFSQEVSR 25 Unmodified _AADSQNSGEGNTGAAESSFSQEVSR_ 0 0 0 P12270 P12270 P12270 TPR Nucleoprotein TPR MULTI-MSMS 210214_Eclipse_Hela_QC 1244.54089355469 2 1243.53674 2485.05893 1.7078 0.0021237 -0.48784 -0.00060665 1.22 0.0015171 1244.03792029389 44.183 0.5462 44.183 43.942 44.488 0 28 10 4 0 0 0 3.7888E-05 1 41553 65.716 64.015 1 9159300 82 849 79 79 95 95 AADTIGYPVMIR 12 Unmodified _AADTIGYPVMIR_ 0 0 0 P31327 P31327 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 653.845153808594 2 653.84483 1305.67511 1.1821 0.00077292 0.22544 0.0001474 1.4076 0.00092033 653.845088628323 70.198 0.9944 70.198 69.726 70.72 0 68 19 6 0 0 0 0.00090654 1 77950 82.287 68.517 1 194560000 83 1141 80 80 96 96 AADVENVPPVISTPHHYLISIYR 23 Unmodified _AADVENVPPVISTPHHYLISIYR_ 0 0 0 Q9Y2T2 Q9Y2T2 Q9Y2T2 AP3M1 AP-3 complex subunit mu-1 MULTI-MSMS 210214_Eclipse_Hela_QC 649.098205566406 4 648.59587 2590.35437 0.94111 0.0006104 0.19289 0.00012511 1.134 0.0007355 648.846749280632 79.016 0.79615 79.016 78.617 79.413 0 46 15 4 0 0 0 0.019297 1 90492 25.803 18.443 1 5153400 84 4017 81 81 97 97 AADVSVTHRPPLSPK 15 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AADVSVTHRPPLSPK_ 1 0 1 Q8IY67 Q8IY67 Q8IY67 RAVER1 Ribonucleoprotein PTB-binding 1 MULTI-MSMS 210214_Eclipse_Hela_QC 539.964965820312 3 539.630011 1615.8682 0.27078 0.00014612 -0.051784 -2.7944E-05 0.219 0.00011818 539.630070729169 40.982 0.79546 40.982 40.661 41.456 0 36 15 4 0 0 0 0.0035681 1 36932 40.801 33.393 1 6998000 85 2644 82 82 98 98 AAEAAAAPAESAAPAAGEEPSK 22 Unmodified _AAEAAAAPAESAAPAAGEEPSK_ 0 0 0 P80723 P80723 P80723 BASP1 Brain acid soluble protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 983.971496582031 2 983.971258 1965.92796 0.72282 0.00071124 -0.26612 -0.00026186 0.4567 0.00044938 983.97090684719 31.63 1.1395 31.63 31.172 32.311 0 99 22 7 0 0 0 6.8339E-05 3 24119 89.358 86.407 1 214860000 86 1759 83 83 99;100;101 100 AAEAAAAPAESAAPAAGEEPSKEEGEPK 28 Unmodified _AAEAAAAPAESAAPAAGEEPSKEEGEPK_ 0 0 1 P80723 P80723 P80723 BASP1 Brain acid soluble protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 879.750854492188 3 879.415588 2635.22493 1.0919 0.00096027 0.0074714 6.5704E-06 1.0994 0.00096684 879.749949605817 30.694 0.9964 30.694 30.275 31.271 0 81 19 7 0 0 0 1.1757E-08 1 22213 62.67 60.093 1 97287000 87 1759 84 84 102 102 AAEAAAAPAESAAPAAGEEPSKEEGEPK 28 Unmodified _AAEAAAAPAESAAPAAGEEPSKEEGEPK_ 0 0 1 P80723 P80723 P80723 BASP1 Brain acid soluble protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1319.12072753906 2 1318.61974 2635.22493 2.0702 0.0027298 -0.26644 -0.00035133 1.8038 0.0023785 1319.12050799675 30.651 0.54897 30.651 30.424 30.973 0 30 10 4 0 0 0 0.00079039 1 22320 58.98 55.201 1 7457700 88 1759 84 84 103 103 AAEAAINILK 10 Unmodified _AAEAAINILK_ 0 0 0 O75569 O75569 O75569 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A MULTI-MSMS 210214_Eclipse_Hela_QC 507.303100585938 2 507.303124 1012.5917 0.51467 0.0002611 0.084937 4.3089E-05 0.59961 0.00030419 507.303094730665 52.801 0.54836 52.801 52.543 53.092 0 17 10 2 0 0 0 0.0030583 1 53913 65.246 37.51 1 3780800 89 468 85 85 104 104 AAEAAPPTQEAQGETEPTEQAPDALEQAADTSR 33 Unmodified _AAEAAPPTQEAQGETEPTEQAPDALEQAADTSR_ 0 0 0 Q8N163 Q8N163 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 1128.18798828125 3 1127.51687 3379.52878 0.77817 0.0008774 0.7404 0.00083482 1.5186 0.0017122 1127.85171879348 66.54 0.54739 66.54 66.249 66.797 0 42 10 5 0 0 0 0.0054755 1 73023 31.58 29.722 1 10486000 90 2667 86 86 105 105 AAEAEVELSAR 11 Unmodified _AAEAEVELSAR_ 0 0 0 Q8IZ83 Q8IZ83 Q8IZ83 ALDH16A1 Aldehyde dehydrogenase family 16 member A1 MULTI-MSMS 210214_Eclipse_Hela_QC 573.293273925781 2 573.293485 1144.57242 0.45777 0.00026243 -0.19251 -0.00011037 0.26525 0.00015207 573.29322549945 32.585 0.47907 32.585 32.311 32.79 0 15 9 2 0 0 0 0.006749 1 25064 51.872 27.751 1 4856700 91 2658 87 87 106 106 AAEAHVDAHYYEQNEQPTGTCAACITGDNR 30 Unmodified _AAEAHVDAHYYEQNEQPTGTCAACITGDNR_ 0 0 0 P55263 P55263 P55263 ADK Adenosine kinase MULTI-MSMS 210214_Eclipse_Hela_QC 838.362121582031 4 838.11128 3348.41602 0.74086 0.00062092 -0.33312 -0.00027919 0.40774 0.00034173 838.612482037606 45.809 1.0451 45.809 45.234 46.28 0 85 20 8 0 0 0 5.9609E-31 1 43774 137.35 137.34 1 74463000 92 1539 88 88 107 107 AAEAHVDAHYYEQNEQPTGTCAACITGDNR 30 Unmodified _AAEAHVDAHYYEQNEQPTGTCAACITGDNR_ 0 0 0 P55263 P55263 P55263 ADK Adenosine kinase MULTI-MSMS 210214_Eclipse_Hela_QC 1117.81384277344 3 1117.14595 3348.41602 0.30296 0.00033846 -0.34654 -0.00038713 -0.043572 -4.8676E-05 1117.8141995903 45.801 0.24874 45.801 45.682 45.931 0 8 4 2 0 0 0 0.017468 1 43979 21.925 19.946 1 2956100 93 1539 88 88 108 108 AAECNIVVTQPR 12 Unmodified _AAECNIVVTQPR_ 0 0 0 Q08211 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 210214_Eclipse_Hela_QC 679.349487304688 2 679.348268 1356.68198 0.53519 0.00036358 -0.32984 -0.00022407 0.20535 0.0001395 679.348187072066 35.407 1.033 35.407 34.845 35.878 0 74 20 7 0 0 0 9.1253E-18 1 28866 171.85 155.96 1 147450000 94 1882 89 89 109 109 AAEDELNIEAK 11 Unmodified _AAEDELNIEAK_ 0 0 0 Q9UQ90 Q9UQ90 Q9UQ90 SPG7 Paraplegin MULTI-MSMS 210214_Eclipse_Hela_QC 601.798950195312 2 601.7986 1201.58265 0.53721 0.00032329 2.5199 0.0015165 3.0571 0.0018397 602.302069318984 40.167 0.59634 40.167 39.816 40.412 0 16 11 2 0 0 0 0.0018846 1 35978 64.841 39.918 1 3396300 95 3979 90 90 110 110 AAEEIGIK 8 Unmodified _AAEEIGIK_ 0 0 0 P11586 P11586 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MSMS 210214_Eclipse_Hela_QC 415.734466552734 2 415.734543 829.454533 NaN NaN NaN NaN NaN NaN NaN 25.791 1 25.791 25.291 26.291 0 0 0 0 0.048858 1 15396 56.547 15.045 1 96 837 91 91 111 111 AAEGVSAADMAK 12 Unmodified _AAEGVSAADMAK_ 0 0 0 Q9NW13 Q9NW13 Q9NW13 RBM28 RNA-binding protein 28 MULTI-MSMS 210214_Eclipse_Hela_QC 561.270812988281 2 560.768788 1119.52302 0.3944 0.00022117 -0.12091 -6.7805E-05 0.27349 0.00015336 560.768894129836 25.961 0.29762 25.961 25.761 26.058 0 12 5 3 0 0 0 0.0018672 1 15697 59.013 42.555 1 7898900 97 3698 92 92 112 112 AAELAVQNEVGLVDNPLK 18 Unmodified _AAELAVQNEVGLVDNPLK_ 0 0 0 Q9NVM6 Q9NVM6 Q9NVM6 DNAJC17 DnaJ homolog subfamily C member 17 MULTI-MSMS 210214_Eclipse_Hela_QC 940.513366699219 2 940.509822 1879.00509 1.2596 0.0011846 0.04283 4.0282E-05 1.3024 0.0012249 941.011120109083 85.122 0.5965 85.122 84.848 85.445 0 31 11 4 0 0 0 8.6121E-07 1 98951 101.39 91.064 1 8358900 98 3683 93 93 113 113 AAELETDIR 9 Unmodified _AAELETDIR_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 210214_Eclipse_Hela_QC 509.264404296875 2 509.264196 1016.51384 0.1707 8.6932E-05 -0.26168 -0.00013326 -0.090978 -4.6332E-05 509.26398740322 33.09 0.68989 33.09 32.836 33.526 0 26 13 2 0 0 0 0.039438 1 25784 39.919 13.504 1 12079000 99 525 94 94 114 114 AAELIANSLATAGDGLIELR 20 Unmodified _AAELIANSLATAGDGLIELR_ 0 0 0 P35232 P35232 P35232 PHB Prohibitin MULTI-MSMS 210214_Eclipse_Hela_QC 1000.05139160156 2 999.546936 1997.07932 0.93086 0.00093044 1.0593 0.0010589 1.9902 0.0019893 1000.04911993204 105.9 0.49841 105.9 105.72 106.22 0 35 9 6 0 0 0 1.6806E-121 1 127815 274.09 244.09 1 189430000 100 1178 95 95 115 115 AAELLMSCFR 10 Unmodified _AAELLMSCFR_ 0 0 0 Q5JVF3 Q5JVF3 Q5JVF3 PCID2 PCI domain-containing protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 599.291809082031 2 599.291376 1196.5682 0.86199 0.00051658 0.44019 0.0002638 1.3022 0.00078038 599.291536348702 69.77 0.44763 69.77 69.576 70.024 0 15 8 2 0 0 0 0.022448 1 77683 44.82 26.09 1 3297500 101 2334 96 96 116 116 AAELLQDEYSGR 12 Unmodified _AAELLQDEYSGR_ 0 0 0 Q9BUK6 Q9BUK6 Q9BUK6 MSTO1 Protein misato homolog 1 MULTI-MSMS 210214_Eclipse_Hela_QC 676.829650878906 2 676.328056 1350.64156 1.2693 0.00085846 -1.108 -0.00074935 0.16133 0.00010911 676.328022791362 46.155 0.84594 46.155 45.732 46.578 0 52 16 4 0 0 0 0.00043423 1 44075 70.977 50.947 1 21028000 102 3290 97 97 117 117 AAELTATQVEEEEEEEDFRK 20 Unmodified _AAELTATQVEEEEEEEDFRK_ 0 0 1 O75717 O75717 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 785.337280273438 3 785.027441 2352.06049 1.263 0.00099152 0.85724 0.00067296 2.1203 0.0016645 785.363703637756 55.917 0.84638 55.917 55.67 56.517 0 47 16 5 0 0 0 8.4878E-10 2 58293 110.96 103.42 1 13276000 103 479 98 98 118;119 119 AAELWGEQAEAR 12 Unmodified _AAELWGEQAEAR_ 0 0 0 Q08379 Q08379 Q08379 GOLGA2 Golgin subfamily A member 2 MULTI-MSMS 210214_Eclipse_Hela_QC 665.822998046875 2 665.822941 1329.63133 0.92794 0.00061785 -0.78487 -0.00052259 0.14307 9.526E-05 665.823272989372 44.463 0.69509 44.463 43.942 44.637 0 21 13 2 0 0 0 0.02125 1 41850 38.567 27.957 1 5459900 104 1884 99 99 120 120 AAEMLSQLDLFSR 13 Unmodified _AAEMLSQLDLFSR_ 0 0 0 P78318 P78318 P78318 IGBP1 Immunoglobulin-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 740.878051757812 2 740.876859 1479.73916 1.4221 0.0010536 0.24063 0.00017828 1.6627 0.0012319 740.877099021167 96.551 0.5964 96.551 96.323 96.919 0 40 11 5 0 0 0 7.2191E-09 1 114752 128.17 102.78 1 8793600 105 1741 100 100 121 121 AAEMMASLLK 10 Unmodified _AAEMMASLLK_ 0 0 0 P33176 P33176 P33176 KIF5B Kinesin-1 heavy chain MULTI-MSMS 210214_Eclipse_Hela_QC 532.928833007812 2 532.77757 1063.54059 0.27499 0.00014651 -0.11353 -6.0485E-05 0.16146 8.6024E-05 532.777591782824 64.581 0.54565 64.581 64.359 64.905 0 20 11 2 0 0 0 0.0032274 2 70402 64.654 50.658 1 9461000 106 1163 101 101 122;123 123 AAEPQEQEFGK 11 Unmodified _AAEPQEQEFGK_ 0 0 0 Q9C0C2 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein MULTI-MSMS 210214_Eclipse_Hela_QC 617.291015625 2 617.290942 1232.56733 0.51995 0.00032096 0.79875 0.00049306 1.3187 0.00081402 617.29089531163 23.934 0.29824 23.934 23.75 24.048 0 14 5 3 0 0 0 0.002527 1 12750 61.691 50.826 1 6234200 107 3381 102 102 124 124 AAEPVEDNCINFVAMK 16 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAEPVEDNCINFVAMK_ 1 0 0 Q14116 Q14116 Q14116 IL18 Interleukin-18 MULTI-MSMS 210214_Eclipse_Hela_QC 925.430786132812 2 925.426587 1848.83862 2.0325 0.0018809 -0.35072 -0.00032457 1.6818 0.0015564 925.426488943916 97.839 1.3425 97.839 97.168 98.511 0 88 26 7 0 0 0 1.8931E-05 1 116413 90.146 84.539 1 35154000 108 2050 103 103 125 125 AAESLADPTEYENLFPGLK 19 Unmodified _AAESLADPTEYENLFPGLK_ 0 0 0 P35606 P35606 P35606 COPB2 Coatomer subunit beta MULTI-MSMS 210214_Eclipse_Hela_QC 1033.51354980469 2 1033.00985 2064.00515 1.2817 0.001324 -0.043058 -4.4479E-05 1.2387 0.0012796 1033.51199588554 105.79 0.34901 105.79 105.63 105.97 0 18 6 4 0 0 0 1.8771E-08 1 127566 104.98 92.098 1 74874000 109 1192 104 104 126 126 AAETVVDPEMTPYLDIANQTGR 22 Unmodified _AAETVVDPEMTPYLDIANQTGR_ 0 0 0 Q9Y5A7 Q9Y5A7 Q9Y5A7 NUB1 NEDD8 ultimate buster 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1196.58154296875 2 1196.07847 2390.14239 1.8809 0.0022497 0.052552 6.2857E-05 1.9334 0.0023125 1196.57973178612 95.452 0.49706 95.452 95.223 95.72 0 34 9 5 0 0 0 0.0074874 1 113319 36.022 1.8431 1 5495700 110 4107 105 105 127 127 AAFALGGLGSGFASNR 16 Unmodified _AAFALGGLGSGFASNR_ 0 0 0 P27708 P27708 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 210214_Eclipse_Hela_QC 748.387634277344 2 748.386239 1494.75793 0.6041 0.0004521 0.094477 7.0706E-05 0.69858 0.00052281 748.386397394622 80.031 0.7462 80.031 79.662 80.408 0 50 14 5 0 0 0 6.3265E-11 1 91684 119.39 91.905 1 24929000 111 1077 106 106 128 128 AAFDDAIAELDTLSEESYK 19 Unmodified _AAFDDAIAELDTLSEESYK_ 0 0 0 P62258 P62258 P62258 YWHAE 14-3-3 protein epsilon MULTI-MSMS 210214_Eclipse_Hela_QC 1044.990234375 2 1044.48641 2086.95826 1.1769 0.0012293 -0.33213 -0.0003469 0.84479 0.00088237 1044.98739738197 107.53 0.69756 107.53 107.36 108.06 0 54 13 7 0 0 0 9.3915E-80 1 129986 242.79 228.88 1 1200600000 112 1649 107 107 129 129 AAFGEEVDAVDTGISR 16 Unmodified _AAFGEEVDAVDTGISR_ 0 0 0 O00273 O00273 O00273 DFFA DNA fragmentation factor subunit alpha MULTI-MSMS 210214_Eclipse_Hela_QC 818.894409179688 2 818.894291 1635.77403 0.81195 0.0006649 0.037755 3.0917E-05 0.84971 0.00069582 818.894298161551 67.449 0.34087 67.449 67.27 67.61 0 12 6 2 0 0 0 0.0009678 1 74333 64.55 46.686 1 5957800 113 147 108 108 130 130 AAFGISDSYVDGSSFDPQR 19 Unmodified _AAFGISDSYVDGSSFDPQR_ 0 0 0 Q9UQ35 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 1010.46807861328 2 1009.95815 2017.90175 1.5282 0.0015434 0.36332 0.00036694 1.8915 0.0019104 1010.46015832593 83.701 0.59717 83.701 83.405 84.002 0 31 11 4 0 0 0 2.1348E-05 1 96827 80.522 69.082 1 10950000 114 3977 109 109 131 131 AAFGISDSYVDGSSFDPQRR 20 Unmodified _AAFGISDSYVDGSSFDPQRR_ 0 0 1 Q9UQ35 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 726.010375976562 3 725.674897 2174.00286 1.2897 0.0009359 0.18456 0.00013393 1.4743 0.0010698 726.343107087728 71.97 0.49701 71.97 71.717 72.214 0 20 9 3 0 0 0 0.030449 1 80804 24.893 17.09 1 2895500 115 3977 110 110 132 132 AAFGLSEAGFNTACVTK 17 Unmodified _AAFGLSEAGFNTACVTK_ 0 0 0 P31040 P31040 P31040 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 872.415710449219 2 872.422162 1742.82977 0.59027 0.00051497 0.16734 0.00014599 0.75761 0.00066096 872.422170218839 74.928 1.0968 74.928 74.505 75.601 0 37 21 2 0 0 0 0.00011631 1 84608 100.22 83.011 1 45139000 116 1138 111 111 133 133 AAFGQGSGPIMLDEVQCTGTEASLADCK 28 Unmodified _AAFGQGSGPIMLDEVQCTGTEASLADCK_ 0 0 0 Q08380 Q08380 Q08380 LGALS3BP Galectin-3-binding protein MULTI-MSMS 210214_Eclipse_Hela_QC 1457.66198730469 2 1457.1568 2912.29904 2.5195 0.0036714 -0.17083 -0.00024893 2.3487 0.0034224 1457.65808210126 90.468 0.44754 90.468 90.206 90.654 0 25 8 5 0 0 0 4.0837E-07 1 106365 71.594 67.125 1 5066900 117 1885 112 112 134 134 AAFQSLLDAQADEAVLDHPDLK 22 Unmodified _AAFQSLLDAQADEAVLDHPDLK_ 0 0 0 Q9UBI1 Q9UBI1 Q9UBI1 COMMD3 COMM domain-containing protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 790.068359375 3 789.732411 2366.1754 1.5814 0.0012489 0.15427 0.00012183 1.7357 0.0013707 790.06687878823 94.776 0.49483 94.776 94.579 95.074 0 17 9 2 0 0 0 0.00081567 1 112293 40.369 37.082 1 8111200 118 3817 113 113 135 135 AAFTAFEEAQLPR 13 Unmodified _AAFTAFEEAQLPR_ 0 0 0 Q96CT7 Q96CT7 Q96CT7 CCDC124 Coiled-coil domain-containing protein 124 MULTI-MSMS 210214_Eclipse_Hela_QC 725.870788574219 2 725.869891 1449.72523 1.3488 0.00097903 -0.16682 -0.00012109 1.182 0.00085794 725.869829334066 75.814 0.72703 75.814 75.452 76.179 0 50 14 5 0 0 0 8.891E-06 1 85874 102.52 87.857 1 29225000 119 2993 114 114 136 136 AAFTVSLDPGPLEQFPHSMEPQLR 24 Unmodified _AAFTVSLDPGPLEQFPHSMEPQLR_ 0 0 0 Q9UKD2 Q9UKD2 Q9UKD2 MRTO4 mRNA turnover protein 4 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 890.450012207031 3 889.779367 2666.31627 1.7368 0.0015454 -0.98009 -0.00087207 0.75672 0.00067332 890.113215553943 102.18 1.0943 102.18 101.64 102.74 0 89 21 6 0 0 0 8.4045E-05 1 122805 53.342 50.693 1 6716300 120 3906 115 115 137 137 AAFVLPEFAR 10 Unmodified _AAFVLPEFAR_ 0 0 0 P19623 P19623 P19623 SRM Spermidine synthase MULTI-MSMS 210214_Eclipse_Hela_QC 560.810363769531 2 560.811116 1119.60768 1.5871 0.00089005 -0.40767 -0.00022863 1.1794 0.00066142 560.810824706554 83.377 1.0454 83.377 82.956 84.002 0 57 20 5 0 0 0 0.00015317 1 96369 103.56 59.755 1 26679000 121 970 116 116 138 138 AAFVSEQQQK 10 Unmodified _AAFVSEQQQK_ 0 0 0 P26006 P26006 P26006 ITGA3 Integrin alpha-3;Integrin alpha-3 heavy chain;Integrin alpha-3 light chain MULTI-MSMS 210214_Eclipse_Hela_QC 568.290710449219 2 568.290745 1134.56694 0.22532 0.00012805 -0.94068 -0.00053458 -0.71536 -0.00040653 568.290334716673 21.137 0.59793 21.137 20.911 21.509 0 27 11 4 0 0 0 0.00096813 1 8737 79.906 48.833 1 12067000 122 1053 117 117 139 139 AAGAAEAAVAAVEEVGSAGQFEELLR 26 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAGAAEAAVAAVEEVGSAGQFEELLR_ 1 0 0 O76003 O76003 O76003 GLRX3 Glutaredoxin-3 MULTI-MSMS 210214_Eclipse_Hela_QC 1280.14501953125 2 1279.64028 2557.26601 2.5942 0.0033197 0.034809 4.4544E-05 2.629 0.0033642 1280.1415786692 113.38 0.2878 113.38 113.22 113.5 0 11 5 4 0 0 0 8.7655E-27 1 138134 148.33 141.1 1 11005000 123 505 118 118 140 140 AAGASDVVLYK 11 Unmodified _AAGASDVVLYK_ 0 0 0 Q9NSD9 Q9NSD9 Q9NSD9 FARSB Phenylalanine--tRNA ligase beta subunit MULTI-MSMS 210214_Eclipse_Hela_QC 547.298217773438 2 547.298039 1092.58152 0.16368 8.9584E-05 0.28256 0.00015465 0.44625 0.00024423 547.29807525538 39.657 0.65025 39.657 39.265 39.915 0 28 13 3 0 0 0 0.00013434 1 34973 96.331 79.555 1 21392000 124 3641 119 119 141 141 AAGCDFTNVVK 11 Unmodified _AAGCDFTNVVK_ 0 0 0 P52758 P52758 P52758 HRSP12 Ribonuclease UK114 MULTI-MSMS 210214_Eclipse_Hela_QC 591.285461425781 2 591.284605 1180.55466 0.70919 0.00041934 0.14717 8.702E-05 0.85636 0.00050636 591.284733377367 42.124 0.59322 42.124 41.804 42.398 0 21 11 2 0 0 0 0.023141 1 38629 41.117 24.004 1 16415000 125 1481 120 120 142 142 AAGDTTVIENSDVSPETESSEK 22 Unmodified _AAGDTTVIENSDVSPETESSEK_ 0 0 0 Q86UP2 Q86UP2 Q86UP2 KTN1 Kinectin MULTI-MSMS 210214_Eclipse_Hela_QC 1134.01586914062 2 1133.51388 2265.01321 0.34551 0.00039164 -0.031796 -3.6041E-05 0.31372 0.0003556 1134.01524210591 46.533 0.54728 46.533 46.28 46.827 0 36 10 5 0 0 0 2.7468E-15 1 44805 132.05 127.5 1 13515000 126 2581 121 121 143 143 AAGFSSSTTSTSWEGNR 17 Unmodified _AAGFSSSTTSTSWEGNR_ 0 0 0 Q7Z478 Q7Z478 Q7Z478 DHX29 ATP-dependent RNA helicase DHX29 MULTI-MSMS 210214_Eclipse_Hela_QC 873.893615722656 2 873.389904 1744.76526 0.87083 0.00076057 0.20466 0.00017874 1.0755 0.00093932 873.389897045675 42.229 0.39712 42.229 42.05 42.448 0 14 7 2 0 0 0 0.0022433 1 38866 64.65 55.646 1 5321900 127 2544 122 122 144 144 AAGGDHGSPDSYR 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAGGDHGSPDSYR_ 1 0 0 P30566 P30566 P30566 ADSL Adenylosuccinate lyase MULTI-MSMS 210214_Eclipse_Hela_QC 666.283630371094 2 666.28418 1330.55381 0.7711 0.00051378 -0.18584 -0.00012382 0.58526 0.00038995 666.284232153752 21.678 0.54759 21.678 21.36 21.908 0 18 10 3 0 0 0 0.0055867 1 9452 43.549 37.991 1 9473000 128 1130 123 123 145 145 AAGGFTHDELLK 12 Unmodified _AAGGFTHDELLK_ 0 0 0 P56182 P56182 P56182 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 210214_Eclipse_Hela_QC 420.5537109375 3 420.21906 1257.63535 0.021119 8.8746E-06 0.4277 0.00017973 0.44882 0.0001886 420.219265195954 35.02 0.88438 35.02 34.706 35.59 0 39 17 4 0 0 0 0.058812 1 28353 25.155 11.219 1 16365000 129 1550 124 124 146 146 AAGGFTHDELLK 12 Unmodified _AAGGFTHDELLK_ 0 0 0 P56182 P56182 P56182 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 210214_Eclipse_Hela_QC 630.32763671875 2 629.824952 1257.63535 0.45712 0.00028791 0.94706 0.00059648 1.4042 0.00088439 629.825487743043 35.005 0.39307 35.005 34.75 35.144 0 11 7 2 0 0 0 0.021068 1 28573 38.714 18.089 1 2512000 130 1550 124 124 147 147 AAGGGGSCDPLAPAGVPCAFSPHSQAYFALASTDGHLR 38 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAGGGGSCDPLAPAGVPCAFSPHSQAYFALASTDGHLR_ 1 0 0 Q15061 Q15061 Q15061 WDR43 WD repeat-containing protein 43 MULTI-MSMS 210214_Eclipse_Hela_QC 1272.26220703125 3 1271.58965 3811.74713 2.0425 0.0025972 -0.1358 -0.00017268 1.9067 0.0024245 1272.25820790089 102.22 0.79583 102.22 101.89 102.69 0 55 15 6 0 0 0 5.6771E-06 1 122595 50.166 50.166 1 13060000 131 2148 125 125 148 148 AAGHEPHLLAR 11 Unmodified _AAGHEPHLLAR_ 0 0 0 Q96IR7 Q96IR7 Q96IR7 HPDL 4-hydroxyphenylpyruvate dioxygenase-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 391.547943115234 3 391.215873 1170.62579 -0.026602 -1.0407E-05 -0.41942 -0.00016408 -0.44602 -0.00017449 391.549823457881 19.973 1.0451 19.973 19.369 20.414 0 47 20 3 0 0 0 0.00012726 1 7339 72.2 65.656 1 8442600 132 3066 126 126 149 149 AAGIDEQENWHEGK 14 Unmodified _AAGIDEQENWHEGK_ 0 0 0 P28838 P28838 P28838 LAP3 Cytosol aminopeptidase MULTI-MSMS 210214_Eclipse_Hela_QC 528.908752441406 3 528.574343 1582.7012 -0.11077 -5.8551E-05 -0.2967 -0.00015683 -0.40747 -0.00021538 528.57414895187 26.532 0.39824 26.532 26.358 26.756 0 13 7 2 0 0 0 0.00056575 1 16483 44.968 36.369 1 14104000 133 1094 127 127 150 150 AAGIEIQK 8 Unmodified _AAGIEIQK_ 0 0 0 Q99459 Q99459 Q99459 CDC5L Cell division cycle 5-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 415.242553710938 2 415.242535 828.470518 -0.0049413 -2.0519E-06 3.5941 0.0014924 3.5891 0.0014904 415.242078271188 24.398 0.38368 24.398 24.135 24.518 0 15 7 3 0 0 0 0.018933 1 13423 53.679 6.8438 1 6423700 134 3159 128 128 151 151 AAGLVSDLDADSGLTLSR 18 Unmodified _AAGLVSDLDADSGLTLSR_ 0 0 0 Q9BW92 Q9BW92 Q9BW92 TARS2 Threonine--tRNA ligase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 881.457214355469 2 880.95488 1759.89521 1.2401 0.0010925 0.24638 0.00021705 1.4865 0.0013095 880.955415644229 85.186 0.74576 85.186 84.848 85.594 0 29 14 3 0 0 0 2.6285E-05 1 99092 85.258 75.771 1 4575700 135 3327 129 129 152 152 AAGPLLTDECR 11 Unmodified _AAGPLLTDECR_ 0 0 0 Q9BQ69 Q9BQ69 Q9BQ69 MACROD1 O-acetyl-ADP-ribose deacetylase MACROD1 MULTI-MSMS 210214_Eclipse_Hela_QC 602.250183105469 2 601.795337 1201.57612 0.27403 0.00016491 -0.1249 -7.5164E-05 0.14913 8.9744E-05 601.795316390502 35.714 0.63241 35.714 35.392 36.025 0 26 12 3 0 0 0 3.2037E-23 2 29616 195.05 187.48 1 42733000 136 3220 130 130 153;154 154 AAGSGELGVTMK 12 Unmodified _AAGSGELGVTMK_ 0 0 0 O75369 O75369 O75369 FLNB Filamin-B MULTI-MSMS 210214_Eclipse_Hela_QC 560.786804199219 2 560.786981 1119.55941 0.33137 0.00018583 -0.39455 -0.00022126 -0.063182 -3.5431E-05 560.786554019632 33.561 1.513 33.561 32.752 34.265 0 96 30 6 0 0 0 4.6887E-05 1 26348 99.53 67.21 1 76224000 137 445 131 131 155 155 AAGSPHLTLEFCNYPSSMR 19 Unmodified _AAGSPHLTLEFCNYPSSMR_ 0 0 0 Q96GM8 Q96GM8 Q96GM8 TOE1 Target of EGR1 protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 713.666931152344 3 713.331308 2136.97209 0.47207 0.00033674 -0.088632 -6.3224E-05 0.38343 0.00027352 713.330643746496 68.778 0.5263 68.778 68.455 68.981 0 18 10 2 0 0 0 0.034949 1 76196 21.685 17.498 1 7704500 138 3046 132 132 156 156 AAGTAAALAFLSQESR 16 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAGTAAALAFLSQESR_ 1 0 0 O75607 O75607 O75607 NPM3 Nucleoplasmin-3 MULTI-MSMS 210214_Eclipse_Hela_QC 803.416625976562 2 803.415194 1604.81583 2.3031 0.0018503 0.054345 4.3662E-05 2.3574 0.001894 803.415204580106 109.32 0.39848 109.32 109.2 109.6 0 20 7 5 0 0 0 1.6526E-133 1 132476 375.33 273.27 1 40105000 139 469 133 133 157 157 AAGTLYTYPENWR 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAGTLYTYPENWR_ 1 0 0 P26641 P26641 P26641 EEF1G Elongation factor 1-gamma MULTI-MSMS 210214_Eclipse_Hela_QC 792.880676269531 2 792.37808 1582.74161 1.5685 0.0012429 -0.19924 -0.00015787 1.3693 0.001085 792.37788028104 95.197 1.3339 95.197 94.483 95.816 0 110 26 6 0 0 0 1.952E-13 4 112623 176.38 170.92 1 133010000 140 1065 134 134 158;159;160;161 158 AAGTSSYWEDLRK 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAGTSSYWEDLRK_ 1 0 1 O95249 O95249 O95249 GOSR1 Golgi SNAP receptor complex member 1 MULTI-MSMS 210214_Eclipse_Hela_QC 763.367736816406 2 763.367712 1524.72087 0.56046 0.00042784 0.33509 0.0002558 0.89555 0.00068363 763.869532288918 65.881 0.59724 65.881 65.602 66.199 0 23 11 3 0 0 0 0.00048595 1 72169 67.726 49.458 1 4184000 141 549 135 135 162 162 AAGVEAAAEVAATEIK 16 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAGVEAAAEVAATEIK_ 1 0 0 P52272 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 210214_Eclipse_Hela_QC 771.905517578125 2 771.904128 1541.7937 1.5335 0.0011837 0.85307 0.00065849 2.3865 0.0018422 771.904084053271 107.43 0.54751 107.43 107.26 107.81 0 34 10 6 0 0 0 1.9213E-68 1 129863 238.2 206.19 1 210550000 142 1464 136 136 163 163 AAGVNVEPFWPGLFAK 16 Unmodified _AAGVNVEPFWPGLFAK_ 0 0 0 P05386 P05386 P05386 RPLP1 60S acidic ribosomal protein P1 MULTI-MSMS 210214_Eclipse_Hela_QC 852.453735351562 2 851.951215 1701.88788 0.77498 0.00066024 -0.58251 -0.00049627 0.19247 0.00016398 851.950739785592 106.15 0.98843 106.15 105.77 106.76 0 47 19 4 0 0 0 2.7677E-38 1 128027 190.68 172.15 1 2172000000 143 685 137 137 164 164 AAGVVLEMIR 10 Unmodified _AAGVVLEMIR_ 0 0 0 Q9Y230 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 210214_Eclipse_Hela_QC 529.805358886719 2 529.804977 1057.5954 0.53055 0.00028109 0.35255 0.00018678 0.8831 0.00046787 529.805207456578 69.462 0.84603 69.462 69.078 69.924 0 47 16 4 0 0 0 0.0017828 1 76917 69.812 49.187 1 22353000 144 3984 138 138 165 165 AAGYDLYSAYDYTIPPMEK 19 Unmodified _AAGYDLYSAYDYTIPPMEK_ 0 0 0 P33316 P33316 P33316 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1084.99963378906 2 1084.49826 2166.98197 1.0801 0.0011713 0.22533 0.00024437 1.3054 0.0014157 1085.00002362543 95.675 1.5963 95.675 94.975 96.571 0 139 32 6 0 0 0 1.8583E-05 1 113776 81.494 76.496 1 30754000 145 1165 139 139 166 166 AAHGGSAASSALK 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAHGGSAASSALK_ 1 0 0 O94888 O94888 O94888 UBXN7 UBX domain-containing protein 7 MULTI-MSMS 210214_Eclipse_Hela_QC 585.298950195312 2 585.299101 1168.58365 0.26727 0.00015643 0.089822 5.2573E-05 0.35709 0.000209 585.299131851132 21.242 0.29901 21.242 21.111 21.41 0 13 5 3 0 0 0 2.77E-13 1 8944 138.66 110.49 1 8322000 146 521 140 140 167 167 AAHIFFTDTCPEPLFSELGR 20 Unmodified _AAHIFFTDTCPEPLFSELGR_ 0 0 0 Q15833 Q15833 Q15833 STXBP2 Syntaxin-binding protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 770.377319335938 3 770.040411 2307.0994 1.9686 0.0015159 -0.0069399 -5.344E-06 1.9617 0.0015106 770.374602048524 97.786 0.64577 97.786 97.417 98.063 0 32 12 4 0 0 0 0.00026833 1 116361 39.849 36.751 1 2534400 147 2218 141 141 168 168 AAHLCAEAALR 11 Unmodified _AAHLCAEAALR_ 0 0 0 Q9UQ80 Q9UQ80 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 MSMS 210214_Eclipse_Hela_QC 591.806213378906 2 591.806039 1181.59753 NaN NaN NaN NaN NaN NaN NaN 25.694 1 25.694 25.194 26.194 0 0 0 0 0.0040863 1 15262 90.15 61.001 1 148 3978 142 142 169 169 AAHLCAEAALR 11 Unmodified _AAHLCAEAALR_ 0 0 0 Q9UQ80 Q9UQ80 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 MSMS 210214_Eclipse_Hela_QC 394.873168945312 3 394.873118 1181.59753 NaN NaN NaN NaN NaN NaN NaN 25.695 1 25.695 25.195 26.195 0 0 0 0 0.0015397 1 15264 76.143 57.703 1 149 3978 142 142 170 170 AAHNNLMAMAK 11 Unmodified _AAHNNLMAMAK_ 0 0 0 CON__ENSEMBL:ENSBTAP00000007350 CON__ENSEMBL:ENSBTAP00000007350 CON__ENSEMBL:ENSBTAP00000007350 MULTI-MSMS 210214_Eclipse_Hela_QC 391.195098876953 3 391.195204 1170.56378 0.081701 3.1961E-05 -1.012 -0.0003959 -0.93033 -0.00036394 391.195177578882 24.577 0.59388 24.577 24.172 24.766 0 25 11 4 0 0 0 0.010842 1 13697 40.883 28.307 1 11820000 + 150 33 143 143 171 171 AAHNNLMAMAK 11 Unmodified _AAHNNLMAMAK_ 0 0 0 CON__ENSEMBL:ENSBTAP00000007350 CON__ENSEMBL:ENSBTAP00000007350 CON__ENSEMBL:ENSBTAP00000007350 MSMS 210214_Eclipse_Hela_QC 586.289123535156 2 586.289168 1170.56378 NaN NaN NaN NaN NaN NaN NaN 24.527 1 24.527 24.027 25.027 0 0 0 0 0.0001451 1 13591 149.94 114.43 1 + 151 33 143 143 172 172 AAHSEGNTTAGLDMR 15 Unmodified _AAHSEGNTTAGLDMR_ 0 0 0 P78371 P78371 P78371 CCT2 T-complex protein 1 subunit beta MULTI-MSMS 210214_Eclipse_Hela_QC 765.852294921875 2 765.851903 1529.68925 0.65485 0.00050152 -0.10629 -8.1405E-05 0.54856 0.00042011 765.852013714298 22.778 0.49852 22.778 22.553 23.052 0 32 9 5 0 0 0 2.2106E-81 1 11026 257.95 243.28 1 64896000 152 1749 144 144 173 173 AAHSEGNTTAGLDMR 15 Unmodified _AAHSEGNTTAGLDMR_ 0 0 0 P78371 P78371 P78371 CCT2 T-complex protein 1 subunit beta MULTI-MSMS 210214_Eclipse_Hela_QC 510.903778076172 3 510.903694 1529.68925 0.084411 4.3126E-05 -0.036706 -1.8753E-05 0.047705 2.4372E-05 510.903783340778 22.778 0.59789 22.778 22.553 23.151 0 31 11 4 0 0 0 2.4473E-05 1 11089 65.511 53.719 1 83356000 153 1749 144 144 174 174 AAHVFFTDSCPDALFNELVK 20 Unmodified _AAHVFFTDSCPDALFNELVK_ 0 0 0 P61764 P61764 P61764 STXBP1 Syntaxin-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 761.372863769531 3 761.036778 2280.0885 1.531 0.0011652 1.2441 0.00094683 2.7752 0.002112 761.373505134395 103.19 0.94403 103.19 102.49 103.43 0 43 18 4 0 0 0 0.0010398 1 123922 27.324 18.616 1 4373200 154 1623 145 145 175 175 AAHVLMPHESTVEHTHVDINEMESPLATR 29 Unmodified _AAHVLMPHESTVEHTHVDINEMESPLATR_ 0 0 0 P49902 P49902 P49902 NT5C2 Cytosolic purine 5-nucleotidase MULTI-MSMS 210214_Eclipse_Hela_QC 543.099975585938 6 542.765598 3250.54993 1.0291 0.00055859 -0.045445 -2.4666E-05 0.9837 0.00053392 543.099866371798 57.956 0.74657 57.956 57.711 58.458 0 20 14 2 0 0 0 0.049777 1 61122 11.65 9.1558 1 3787600 155 1401 146 146 176 176 AAIAASEVLVDSAEEGSLAAAAELAAQK 28 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAIAASEVLVDSAEEGSLAAAAELAAQK_ 1 0 0 O95926 O95926 O95926 SYF2 Pre-mRNA-splicing factor SYF2 MULTI-MSMS 210214_Eclipse_Hela_QC 1349.66052246094 2 1349.69271 2697.37087 2.2956 0.0030984 1.9703 0.0026593 4.2659 0.0057577 1350.69754904718 113.44 0.14955 113.44 113.35 113.5 0 8 2 4 0 0 0 2.1171E-05 1 138187 93.424 87.882 1 1367200 156 608 147 147 177 177 AAIAQALAGEVSVVPPSR 18 Unmodified _AAIAQALAGEVSVVPPSR_ 0 0 0 Q2TAY7 Q2TAY7 Q2TAY7 SMU1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 868.863525390625 2 868.488693 1734.96283 0.45906 0.00039869 0.02741 2.3805E-05 0.48647 0.00042249 868.488636359736 82.452 0.80969 82.452 81.998 82.807 0 44 17 3 0 0 0 2.0996E-12 3 95289 160.69 146.53 1 19417000 157 2270 148 148 178;179;180 179 AAIAQLNGK 9 Unmodified _AAIAQLNGK_ 0 0 0 Q96PK6 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 MULTI-MSMS 210214_Eclipse_Hela_QC 443.261016845703 2 443.261259 884.507966 -0.082293 -3.6477E-05 -0.27914 -0.00012373 -0.36143 -0.00016021 443.261139919864 24.244 0.37052 24.244 24.048 24.419 0 13 7 2 0 0 0 9.763E-06 1 13195 135.87 49.393 1 21697000 158 3111 149 149 181 181 AAIDWFDGK 9 Unmodified _AAIDWFDGK_ 0 0 0 Q92804;P35637 Q92804;P35637 Q92804 TAF15;FUS TATA-binding protein-associated factor 2N;RNA-binding protein FUS MULTI-MSMS 210214_Eclipse_Hela_QC 511.750793457031 2 511.750724 1021.4869 -0.012649 -6.4732E-06 0.24814 0.00012698 0.23549 0.00012051 511.750798840244 68.967 1.4197 68.967 68.505 69.924 0 93 28 5 0 0 0 0.0017562 2 76960 79.906 19.47 1 147030000 159 2910;1195 150 150 182;183 183 AAIEAFNK 8 Unmodified _AAIEAFNK_ 0 0 0 Q9UHB9 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 210214_Eclipse_Hela_QC 432.234710693359 2 432.23471 862.454868 -0.39705 -0.00017162 0.9342 0.0004038 0.53716 0.00023218 432.235148472567 28.667 0.9493 28.667 27.845 28.794 0 37 19 3 0 0 0 0.017198 1 18754 56.27 25.658 1 56064000 160 3860 151 151 184 184 AAIISAEGDSK 11 Unmodified _AAIISAEGDSK_ 0 0 0 P35232 P35232 P35232 PHB Prohibitin MULTI-MSMS 210214_Eclipse_Hela_QC 531.277404785156 2 531.277303 1060.54005 -0.36188 -0.00019226 0.34467 0.00018311 -0.017207 -9.1417E-06 531.277462047328 24.895 0.5956 24.895 24.667 25.263 0 31 11 4 0 0 0 1.3481E-10 1 14054 137.05 112.1 1 80045000 161 1178 152 152 185 185 AAILETAPK 9 Unmodified _AAILETAPK_ 0 0 0 Q9P2E9 Q9P2E9 Q9P2E9 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 457.270690917969 2 457.271293 912.528032 0.087854 4.0173E-05 -0.6233 -0.00028502 -0.53545 -0.00024485 457.27106875146 29.328 0.79005 29.328 28.988 29.778 0 28 15 3 0 0 0 0.0015451 1 20384 81.296 60.776 1 6324700 162 3802 153 153 186 186 AAILPTSIFLTNK 13 Unmodified _AAILPTSIFLTNK_ 0 0 0 O14744 O14744 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 694.91162109375 2 694.911027 1387.8075 1.4978 0.0010408 0.25394 0.00017647 1.7517 0.0012173 694.911193352065 94.006 0.79568 94.006 93.588 94.383 0 57 15 5 0 0 0 0.0074976 1 110943 47.844 38.138 1 28105000 163 205 154 154 187 187 AAILQTEVDALR 12 Unmodified _AAILQTEVDALR_ 0 0 0 Q8IUD2;O15083 Q8IUD2 Q8IUD2 ERC1;ERC2 ELKS/Rab6-interacting/CAST family member 1;ERC protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 650.869689941406 2 650.366984 1298.71942 0.14459 9.4037E-05 0.33678 0.00021903 0.48137 0.00031307 650.366499905665 68.893 0.42422 68.893 68.604 69.029 0 12 8 2 0 0 0 0.0098636 1 76363 61.56 44.646 1 2252600 164 2611 155 155 188 188 AAISSGIEDPVPTLHLTER 19 Unmodified _AAISSGIEDPVPTLHLTER_ 0 0 0 O75175 O75175 O75175 CNOT3 CCR4-NOT transcription complex subunit 3 MULTI-MSMS 210214_Eclipse_Hela_QC 669.692016601562 3 669.356616 2005.04802 1.3222 0.00088505 0.20918 0.00014002 1.5314 0.0010251 669.356361475675 74.611 0.59688 74.611 74.256 74.853 0 33 11 4 0 0 0 0.017078 1 84201 28.505 11.821 1 9101000 165 429 156 156 189 189 AALADDFDTPR 11 Unmodified _AALADDFDTPR_ 0 0 0 Q9HA77 Q9HA77 Q9HA77 CARS2 Probable cysteine--tRNA ligase, mitochondrial MSMS 210214_Eclipse_Hela_QC 596.285522460938 2 596.28566 1190.55677 NaN NaN NaN NaN NaN NaN NaN 49.334 1 49.334 48.834 49.834 0 0 0 0 0.011442 1 48905 60.518 42.483 1 166 3531 157 157 190 190 AALADVLR 8 Unmodified _AALADVLR_ 0 0 0 Q9HC35 Q9HC35 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 MSMS 210214_Eclipse_Hela_QC 414.750946044922 2 414.750527 827.486502 NaN NaN NaN NaN NaN NaN NaN 51.099 1 51.099 50.599 51.599 0 0 0 0 0.0077527 1 51390 82.671 37.698 1 167 3553 158 158 191 191 AALAHPFFQDVTK 13 Unmodified _AALAHPFFQDVTK_ 0 0 0 P24941 P24941 P24941 CDK2 Cyclin-dependent kinase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 482.592254638672 3 482.257626 1443.75105 0.56656 0.00027323 0.3035 0.00014636 0.87006 0.00041959 482.257768443361 52.768 0.54797 52.768 52.494 53.042 0 23 10 3 0 0 0 0.04039 1 53661 24.415 16.311 1 6063200 168 1039 159 159 192 192 AALAHSEEVTASQVAATK 18 Unmodified _AALAHSEEVTASQVAATK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 892.965148925781 2 892.462872 1782.91119 1.037 0.00092545 -0.067934 -6.0629E-05 0.96903 0.00086482 892.462784057497 31.594 0.54684 31.594 31.321 31.868 0 18 10 2 0 0 0 6.2468E-05 1 23664 79.089 70.134 1 11469000 169 2158 160 160 193 193 AALAHSEEVTASQVAATK 18 Unmodified _AALAHSEEVTASQVAATK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-SECPEP 210214_Eclipse_Hela_QC 595.606750488281 3 595.311007 1782.91119 0.68948 0.00041046 0.043496 2.5894E-05 0.73298 0.00043635 595.311098882519 31.604 0.79502 31.604 31.222 32.017 0 36 15 3 0 0 0 6.5624E-23 1 23818 101.67 101.67 1 53492000 170 2158 160 160 194 194 AALAPLPPLPAQFK 14 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AALAPLPPLPAQFK_ 1 0 0 Q9NP79 Q9NP79 Q9NP79 VTA1 Vacuolar protein sorting-associated protein VTA1 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 738.436584472656 2 738.43467 1474.85479 0.91654 0.00067681 -0.17787 -0.00013135 0.73867 0.00054546 738.43448340575 109.22 0.3983 109.22 109.05 109.45 0 25 7 4 0 0 0 2.5442E-05 1 132281 91.867 81.779 1 38295000 171 3575 161 161 195 195 AALDCSTSHLDEFYSDPHAVAGALK 25 Unmodified _AALDCSTSHLDEFYSDPHAVAGALK_ 0 0 0 Q68EM7 Q68EM7 Q68EM7 ARHGAP17 Rho GTPase-activating protein 17 MULTI-MSMS 210214_Eclipse_Hela_QC 670.06640625 4 669.565609 2674.23333 1.3053 0.00087397 -0.097693 -6.5412E-05 1.2076 0.00080856 669.565551693387 71.975 0.74623 71.975 71.617 72.363 0 33 14 3 0 0 0 0.03508 1 80608 17.943 15.181 1 14740000 172 2403 162 162 196 196 AALDEAQGVGLDSTGYYDQEIYGGSDSR 28 Unmodified _AALDEAQGVGLDSTGYYDQEIYGGSDSR_ 0 0 0 O75533 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1470.15930175781 2 1469.15468 2936.2948 2.3476 0.003449 0.3707 0.00054462 2.7183 0.0039937 1469.65690608564 87.211 0.64622 87.211 86.886 87.533 0 51 12 6 0 0 0 6.5383E-17 1 101718 106.94 102.98 1 14122000 173 466 163 163 197 197 AALDGTPGMIGYGMAK 16 Unmodified _AALDGTPGMIGYGMAK_ 0 0 0 P09417 P09417 P09417 QDPR Dihydropteridine reductase MULTI-MSMS 210214_Eclipse_Hela_QC 777.370056152344 2 776.878544 1551.74254 1.2329 0.00095778 -1.636 -0.001271 -0.40314 -0.00031319 776.87899498507 70.447 0.84532 70.447 70.223 71.068 0 33 16 3 0 0 0 0.0033637 2 78541 48.004 33.239 1 10464000 174 772 164 164 198;199 198 AALDSLSLFTSLGLSEQK 18 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AALDSLSLFTSLGLSEQK_ 1 0 0 P47897 P47897 P47897 QARS Glutamine--tRNA ligase MULTI-MSMS 210214_Eclipse_Hela_QC 962.013122558594 2 961.509488 1921.00442 1.9097 0.0018362 1.0431 0.0010029 2.9528 0.0028391 961.510444416886 113.1 0.42619 113.1 112.93 113.35 0 27 8 5 0 0 0 1.9728E-93 1 137692 260.81 235.34 1 27940000 175 1331 165 165 200 200 AALEALGSCLNNK 13 Unmodified _AALEALGSCLNNK_ 0 0 0 P34897 P34897 P34897 SHMT2 Serine hydroxymethyltransferase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 680.849792480469 2 680.848101 1359.68165 1.299 0.00088439 -0.094632 -6.443E-05 1.2043 0.00081996 680.848230256182 53.932 1.2839 53.932 53.391 54.675 0 92 25 5 0 0 0 1.7714E-08 1 55091 161.44 139.85 1 82373000 176 1172 166 166 201 201 AALEALLPYTER 12 Unmodified _AALEALLPYTER_ 0 0 0 Q12788 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 674.371276855469 2 673.86936 1345.72417 0.86329 0.00058174 -0.22071 -0.00014873 0.64258 0.00043302 673.869822834958 82.365 1.1579 82.365 81.749 82.907 0 68 24 5 0 0 0 0.00038817 1 94642 73.887 52.985 1 18882000 177 1908 167 167 202 202 AALEAQNALHNMK 13 Unmodified _AALEAQNALHNMK_ 0 0 0 Q92879 Q92879 Q92879 CELF1 CUGBP Elav-like family member 1 MULTI-MSMS 210214_Eclipse_Hela_QC 705.861450195312 2 705.861543 1409.70853 1.0229 0.00072204 -0.82243 -0.00058052 0.2005 0.00014152 705.861353383456 30.498 0.6475 30.498 30.076 30.723 0 35 12 4 0 0 0 1.4542E-13 1 22026 147.4 116.83 1 17487000 178 2914 168 168 203 203 AALEAQNALHNMK 13 Unmodified _AALEAQNALHNMK_ 0 0 0 Q92879 Q92879 Q92879 CELF1 CUGBP Elav-like family member 1 MULTI-MSMS 210214_Eclipse_Hela_QC 470.910186767578 3 470.910121 1409.70853 0.45485 0.00021419 -0.18016 -8.4841E-05 0.27469 0.00012935 470.910196862884 30.517 0.74761 30.517 30.225 30.973 0 30 14 3 0 0 0 5.2697E-06 1 22071 80.69 65.488 1 20822000 179 2914 168 168 204 204 AALEDTLAETEAR 13 Unmodified _AALEDTLAETEAR_ 0 0 0 P08727;CON__P08727 P08727 P08727 KRT19 Keratin, type I cytoskeletal 19 MULTI-MSMS 210214_Eclipse_Hela_QC 695.343811035156 2 695.346446 1388.67834 1.4974 0.0010412 -1.2952 -0.00090058 0.20221 0.0001406 695.345106603817 54.022 1.1343 54.022 53.59 54.725 0 80 22 6 0 0 0 1.7961E-08 1 55299 119.22 102.55 1 87579000 + 180 759 169 169 205 205 AALEELVK 8 Unmodified _AALEELVK_ 0 0 0 P12081 P12081 P12081 HARS Histidine--tRNA ligase, cytoplasmic MULTI-MSMS 210214_Eclipse_Hela_QC 436.758209228516 2 436.758018 871.501483 0.25626 0.00011193 -0.040604 -1.7734E-05 0.21566 9.4191E-05 436.757950418554 46.404 0.74645 46.404 46.08 46.827 0 31 14 3 0 0 0 0.0060755 2 44580 77.058 27.699 1 23475000 181 844 170 170 206;207 206 AALEEVEGDVAELELK 16 Unmodified _AALEEVEGDVAELELK_ 0 0 0 Q15057 Q15057 Q15057 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 858.443664550781 2 857.940907 1713.86726 1.7007 0.0014591 0.50905 0.00043674 2.2098 0.0018958 857.941388975367 95.379 0.497 95.379 95.124 95.621 0 23 9 4 0 0 0 0.0082267 1 113126 51.013 40.641 1 3960200 182 2146 171 171 208 208 AALEEVER 8 Unmodified _AALEEVER_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 458.740386962891 2 458.740357 915.46616 0.20109 9.2248E-05 -0.42463 -0.00019479 -0.22354 -0.00010255 458.740142789887 25.602 0.69603 25.602 25.263 25.959 0 30 13 3 0 0 0 0.0017507 1 15048 108.46 12.93 1 20087000 183 2158 172 172 209 209 AALEEVYPDLTPEETRR 17 Unmodified _AALEEVYPDLTPEETRR_ 0 0 1 Q9H0D6 Q9H0D6 Q9H0D6 XRN2 5-3 exoribonuclease 2 MULTI-MSMS 210214_Eclipse_Hela_QC 663.670593261719 3 663.668971 1987.98508 0.78074 0.00051815 1.4049 0.00093239 2.1856 0.0014505 664.339949604765 62.919 0.64622 62.919 62.578 63.224 0 35 12 4 0 0 0 0.0013657 2 67884 48.053 38.395 1 9189200 184 3410 173 173 210;211 211 AALEQLLK 8 Unmodified _AALEQLLK_ 0 0 0 Q92797 Q92797 Q92797 SYMPK Symplekin MULTI-MSMS 210214_Eclipse_Hela_QC 443.273712158203 2 443.273835 884.533118 0.50192 0.00022249 0.23008 0.00010199 0.732 0.00032448 443.273961110389 56.161 0.64796 56.161 55.869 56.517 0 18 12 2 0 0 0 0.017596 2 58553 55.676 18.118 1 2956200 185 2909 174 174 212;213 213 AALETDENLLLCAPTGAGK 19 Unmodified _AALETDENLLLCAPTGAGK_ 0 0 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 210214_Eclipse_Hela_QC 973.402587890625 2 972.490772 1942.96699 1.369 0.0013313 0.099434 9.6699E-05 1.4684 0.001428 972.992400590494 81.041 0.69644 81.041 80.755 81.452 0 43 13 4 0 0 0 9.5955E-06 2 93370 104.24 91.264 1 24160000 186 472 175 175 214;215 215 AALEYLEDIDLK 12 Unmodified _AALEYLEDIDLK_ 0 0 0 Q9BRX8 Q9BRX8 Q9BRX8 FAM213A Redox-regulatory protein FAM213A MULTI-MSMS 210214_Eclipse_Hela_QC 696.8671875 2 696.866482 1391.71841 1.3056 0.00090983 1.1335 0.00078992 2.4391 0.0016998 696.866513407032 91.406 0.64587 91.406 91.102 91.748 0 29 12 3 0 0 0 0.022455 1 107534 37.6 14.28 1 6455400 187 3249 176 176 216 216 AALFNTR 7 Unmodified _AALFNTR_ 0 0 0 Q15024 Q15024 Q15024 EXOSC7 Exosome complex component RRP42 MSMS 210214_Eclipse_Hela_QC 396.72119140625 2 396.72177 791.428987 NaN NaN NaN NaN NaN NaN NaN 28.988 1 28.988 28.488 29.488 0 0 0 0 0.045329 1 19966 64.757 31.242 1 188 2136 177 177 217 217 AALGHLAGEAAAAPGPGTPCASR 23 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AALGHLAGEAAAAPGPGTPCASR_ 1 0 0 Q9H7E9 Q9H7E9 Q9H7E9 C8orf33 UPF0488 protein C8orf33 MULTI-MSMS 210214_Eclipse_Hela_QC 1073.02978515625 2 1073.02892 2144.04329 0.56529 0.00060658 0.11632 0.00012481 0.68161 0.00073139 1073.53083109262 71.822 0.5473 71.822 71.567 72.115 0 30 10 4 0 0 0 4.1751E-07 1 80410 109.84 97.673 1 5522300 189 3499 178 178 218 218 AALGPLVTGLYDVQAFK 17 Unmodified _AALGPLVTGLYDVQAFK_ 0 0 0 P11172 P11172 P11172 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase MULTI-MSMS 210214_Eclipse_Hela_QC 881.993408203125 2 881.990537 1761.96652 0.94099 0.00082994 1.0288 0.00090738 1.9698 0.0017373 881.991439583291 105.9 0.39884 105.9 105.72 106.12 0 21 7 4 0 0 0 6.2422E-05 1 127819 102.66 93.707 1 49674000 190 822 179 179 219 219 AALGSPSHTFR 11 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AALGSPSHTFR_ 1 0 0 Q96HJ9 Q96HJ9 Q96HJ9 C7orf55 UPF0562 protein C7orf55 MULTI-MSMS 210214_Eclipse_Hela_QC 593.304260253906 2 593.304187 1184.59382 0.72669 0.00043115 -1.6421 -0.00097426 -0.91539 -0.00054311 593.302686819449 42.753 0.99628 42.753 42.448 43.444 0 27 19 2 0 0 0 0.00059727 1 39614 67.897 57.14 1 6487500 191 3053 180 180 220 220 AALGVAEAVAAPHPAEGAETAEAVELSR 28 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AALGVAEAVAAPHPAEGAETAEAVELSR_ 1 0 0 Q86Y56 Q86Y56 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal MULTI-MSMS 210214_Eclipse_Hela_QC 1365.69616699219 2 1365.19067 2728.36679 2.5212 0.003442 1.2916 0.0017633 3.8129 0.0052053 1365.69332362258 100.27 0.34775 100.27 100.1 100.45 0 16 6 3 0 0 0 2.5081E-09 1 119948 85.619 81.377 1 1413700 192 2606 181 181 221 221 AALGVLESDLPSAVTLLK 18 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AALGVLESDLPSAVTLLK_ 1 0 0 Q8NEJ9 Q8NEJ9 Q8NEJ9 NGDN Neuroguidin MULTI-MSMS 210214_Eclipse_Hela_QC 920.530456542969 2 920.027317 1838.04008 1.9374 0.0017825 0.27158 0.00024986 2.209 0.0020323 920.027553913657 112.8 0.48837 112.8 112.68 113.17 0 21 9 5 0 0 0 1.7721E-08 1 137287 111.79 105.85 1 13763000 193 2758 182 182 222 222 AALHLYSNTLNFQISEVEPK 20 Unmodified _AALHLYSNTLNFQISEVEPK_ 0 0 0 P41227 P41227 P41227 NAA10 N-alpha-acetyltransferase 10 MULTI-MSMS 210214_Eclipse_Hela_QC 759.065979003906 3 758.730342 2273.1692 1.1183 0.00084851 0.23864 0.00018107 1.357 0.0010296 759.064799882052 85.569 0.69565 85.569 85.346 86.041 0 23 13 2 0 0 0 0.0007463 1 99617 45.347 41.365 1 9812800 194 1256 183 183 223 223 AALIYTCTVCR 11 Unmodified _AALIYTCTVCR_ 0 0 0 Q9Y5V0 Q9Y5V0 Q9Y5V0 ZNF706 Zinc finger protein 706 MULTI-MSMS 210214_Eclipse_Hela_QC 664.32958984375 2 664.32849 1326.64243 0.87261 0.0005797 0.16253 0.00010797 1.0351 0.00068767 664.328097339194 49.584 0.74368 49.584 49.237 49.981 0 26 14 3 0 0 0 0.0037762 1 49118 55.567 49.263 1 3609100 195 4126 184 184 224 224 AALLAQYADVTDEEDEADEK 20 Unmodified _AALLAQYADVTDEEDEADEK_ 0 0 0 Q96MW1 Q96MW1 Q96MW1 CCDC43 Coiled-coil domain-containing protein 43 MULTI-MSMS 210214_Eclipse_Hela_QC 1098.99853515625 2 1098.49496 2194.97537 1.0497 0.0011531 0.095265 0.00010465 1.145 0.0012577 1098.49451167737 75.809 0.42815 75.809 75.601 76.029 0 18 8 3 0 0 0 0.0027712 1 86081 38.189 26.27 1 6251700 196 3100 185 185 225 225 AALLEAGMPECTEDK 15 Unmodified _AALLEAGMPECTEDK_ 0 0 0 Q9C0C9 Q9C0C9 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O MULTI-MSMS 210214_Eclipse_Hela_QC 818.376037597656 2 817.873656 1633.73276 1.2383 0.0010128 -1.4648 -0.001198 -0.22643 -0.00018519 817.872700695148 57.363 0.44815 57.363 57.113 57.562 0 15 8 2 0 0 0 0.00071292 3 60268 57.836 51.303 1 4203700 197 3382 186 186 226;227;228 227 AALLELWELR 10 Unmodified _AALLELWELR_ 0 0 0 Q13813 Q13813 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 210214_Eclipse_Hela_QC 607.351501464844 2 607.350606 1212.68666 0.8798 0.00053435 0.059772 3.6302E-05 0.93957 0.00057065 607.852057659695 103.98 0.64684 103.98 103.58 104.23 0 23 12 2 0 0 0 0.0052409 1 124882 57.598 17.531 1 3743900 198 2034 187 187 229 229 AALLNFDEFAVSK 13 Unmodified _AALLNFDEFAVSK_ 0 0 0 Q9Y613 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 712.877868652344 2 712.874642 1423.73473 1.6591 0.0011827 0.79406 0.00056607 2.4532 0.0017488 712.874945572233 93.184 0.64626 93.184 92.941 93.588 0 25 12 3 0 0 0 0.012603 1 110062 42.743 33.88 1 2606400 199 4132 188 188 230 230 AALLNQHYQVNFK 13 Unmodified _AALLNQHYQVNFK_ 0 0 0 P07814 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 210214_Eclipse_Hela_QC 515.944152832031 3 515.94393 1544.80996 0.80108 0.00041331 0.25766 0.00013294 1.0587 0.00054625 515.943993489417 50.875 0.82084 50.875 50.578 51.399 0 53 16 4 0 0 0 2.6699E-24 1 50916 147.37 137.83 1 70025000 200 728 189 189 231 231 AALLSGPPGVGK 12 Unmodified _AALLSGPPGVGK_ 0 0 0 P35251 P35251 P35251 RFC1 Replication factor C subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 533.815979003906 2 533.816399 1065.61824 0.84228 0.00044962 -1.9615 -0.0010471 -1.1192 -0.00059743 533.816276656565 47.54 0.99503 47.54 47.125 48.12 0 39 19 4 0 0 0 0.019394 1 46394 40.058 24.619 1 5784700 201 1184 190 190 232 232 AALLTER 7 Unmodified _AALLTER_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 210214_Eclipse_Hela_QC 387.229614257812 2 387.229428 772.444303 0.62326 0.00024134 0.04243 1.643E-05 0.66569 0.00025777 387.229393526113 25.586 0.39802 25.586 25.363 25.761 0 12 7 2 0 0 0 0.0017729 1 15115 132.96 97.883 1 40533000 202 4111 191 191 233 233 AALMESQGQQQEER 14 Unmodified _AALMESQGQQQEER_ 0 0 0 Q14980 Q14980 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 MSMS 210214_Eclipse_Hela_QC 802.871643066406 2 802.870293 1603.72603 NaN NaN NaN NaN NaN NaN NaN 23.65 1 23.65 23.15 24.15 0 0 0 0 0.048287 1 12329 59.265 38.394 1 203 2122 192 192 234 234 AALMFANAEEEFFYEK 16 Unmodified _AALMFANAEEEFFYEK_ 0 0 0 Q9P287 Q9P287 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein MULTI-MSMS 210214_Eclipse_Hela_QC 955.939880371094 2 955.437477 1908.8604 1.8767 0.0017931 0.488 0.00046626 2.3647 0.0022593 955.43822185375 101.71 0.8457 101.71 101.3 102.14 0 57 16 6 0 0 0 0.003715 1 121803 47.288 34.088 1 6372500 204 3799 193 193 235 235 AALNALQPPEFR 12 Unmodified _AALNALQPPEFR_ 0 0 0 Q3ZAQ7 Q3ZAQ7 Q3ZAQ7 VMA21 Vacuolar ATPase assembly integral membrane protein VMA21 MULTI-MSMS 210214_Eclipse_Hela_QC 663.862243652344 2 663.861869 1325.70918 1.0594 0.00070332 -0.7858 -0.00052166 0.27363 0.00018165 663.861981409435 69.81 0.99536 69.81 69.277 70.273 0 74 19 5 0 0 0 5.3706E-08 1 77665 122.96 110.74 1 13059000 205 2281 194 194 236 236 AALNELLK 8 Unmodified _AALNELLK_ 0 0 0 Q6PGP7 Q6PGP7 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 MULTI-MSMS 210214_Eclipse_Hela_QC 436.266265869141 2 436.26601 870.517468 0.22733 9.9176E-05 -0.21626 -9.4349E-05 0.011064 4.8269E-06 436.265984565665 51.987 0.54769 51.987 51.747 52.295 0 19 10 2 0 0 0 0.018613 1 52643 54.157 17.762 1 3575800 206 2459 195 195 237 237 AALNGADIYAGCCTLK 16 Unmodified _AALNGADIYAGCCTLK_ 0 0 0 Q8WVV9 Q8WVV9 Q8WVV9 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like MULTI-MSMS 210214_Eclipse_Hela_QC 849.40478515625 2 849.402915 1696.79128 1.5323 0.0013015 -0.12762 -0.0001084 1.4047 0.0011931 849.904269203031 60.504 0.34847 60.504 60.299 60.647 0 17 6 3 0 0 0 0.0065352 1 64607 41.54 34.937 1 5311300 207 2842 196 196 238 238 AALPDLTK 8 Unmodified _AALPDLTK_ 0 0 0 Q13217 Q13217 Q13217 DNAJC3 DnaJ homolog subfamily C member 3 MULTI-MSMS 210214_Eclipse_Hela_QC 414.744842529297 2 414.744911 827.475269 -0.46937 -0.00019467 0.31442 0.0001304 -0.15495 -6.4264E-05 414.744982363995 41.305 0.49671 41.305 41.009 41.506 0 15 9 2 0 0 0 0.056349 1 37353 39.324 8.8205 1 3589800 208 1960 197 197 239 239 AALPLTTSDTK 11 Unmodified _AALPLTTSDTK_ 0 0 0 Q7Z6Z7 Q7Z6Z7 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 MULTI-MSMS 210214_Eclipse_Hela_QC 559.309143066406 2 559.308603 1116.60265 0.26109 0.00014603 -2.0887 -0.0011682 -1.8276 -0.0010222 559.306783588556 37.455 1.0315 37.455 36.863 37.894 0 55 20 3 0 0 0 0.00051734 1 31697 79.986 55.091 1 20209000 209 2557 198 198 240 240 AALQEEEQASK 11 Unmodified _AALQEEEQASK_ 0 0 0 O00139 O00139 O00139 KIF2A Kinesin-like protein KIF2A MULTI-MSMS 210214_Eclipse_Hela_QC 602.296447753906 2 602.296224 1202.5779 0.13989 8.4257E-05 0.36669 0.00022086 0.50658 0.00030511 602.296413004322 19.24 0.49787 19.24 19.021 19.518 0 21 9 3 0 0 0 0.002527 1 5970 61.691 31.882 1 3701900 210 126 199 199 241 241 AALQEELQLCK 11 Unmodified _AALQEELQLCK_ 0 0 0 P49327 P49327 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 210214_Eclipse_Hela_QC 651.841430664062 2 651.839745 1301.66494 0.93424 0.00060897 -0.27706 -0.0001806 0.65718 0.00042838 651.839582364938 55.896 0.59757 55.896 55.621 56.218 0 22 11 2 0 0 0 4.0419E-05 1 58046 103.56 73.309 1 23071000 211 1365 200 200 242 242 AALQEGHQFLCSIEA 15 Unmodified _AALQEGHQFLCSIEA_ 0 0 0 P50583 P50583 P50583 NUDT2 Bis(5-nucleosyl)-tetraphosphatase [asymmetrical] MULTI-MSMS 210214_Eclipse_Hela_QC 837.402465820312 2 837.401229 1672.78791 1.5841 0.0013265 1.4143 0.0011844 2.9984 0.0025109 837.401627059166 74.231 0.5974 74.231 73.907 74.505 0 31 11 4 0 0 0 0.00084393 1 83789 54.776 46.263 1 8567100 212 1421 201 201 243 243 AALQELLSK 9 Unmodified _AALQELLSK_ 0 0 0 P62851 P62851 P62851 RPS25 40S ribosomal protein S25 MULTI-MSMS 210214_Eclipse_Hela_QC 486.790771484375 2 486.78985 971.565146 0.74574 0.00036302 -0.13755 -6.6956E-05 0.60819 0.00029606 486.789759274118 57.487 1.394 57.487 56.915 58.308 0 62 27 3 0 0 0 0.00016829 1 60113 113.71 81.59 1 235860000 213 1683 202 202 244 244 AALRPLVK 8 Unmodified _AALRPLVK_ 0 0 1 P62910 P62910 P62910 RPL32 60S ribosomal protein L32 MULTI-MSMS 210214_Eclipse_Hela_QC 434.292175292969 2 434.292362 866.570172 0.12846 5.5789E-05 -0.12759 -5.541E-05 0.00087271 3.7901E-07 434.292279684482 22.927 0.79776 22.927 22.703 23.501 0 44 15 5 0 0 0 0.00062912 1 11233 148.54 97.503 1 256280000 214 1695 203 203 245 245 AALRPLVK 8 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AALRPLVK_ 1 0 1 P62910 P62910 P62910 RPL32 60S ribosomal protein L32 MULTI-MSMS 210214_Eclipse_Hela_QC 455.297515869141 2 455.297645 908.580737 0.23765 0.0001082 0.042952 1.9556E-05 0.28061 0.00012776 455.297652796787 48.69 0.63002 48.69 48.358 48.988 0 17 12 2 0 0 0 0.006569 1 47917 62.717 25.159 1 2792500 215 1695 203 204 246 246 AALRPTDVVLEVGPGTGNMTVK 22 Unmodified _AALRPTDVVLEVGPGTGNMTVK_ 0 0 1 Q9UNQ2 Q9UNQ2 Q9UNQ2 DIMT1 Probable dimethyladenosine transferase MULTI-MSMS 210214_Eclipse_Hela_QC 742.404602050781 3 742.403461 2224.18855 1.5263 0.0011331 -0.83214 -0.00061778 0.69414 0.00051533 743.07090043523 75.701 0.62728 75.701 75.402 76.029 0 32 12 3 0 0 0 0.0017696 1 85801 44.052 39.866 1 7822200 216 3963 204 205 247 247 AALSALESFLK 11 Unmodified _AALSALESFLK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 210214_Eclipse_Hela_QC 575.328735351562 2 575.329339 1148.64412 0.57878 0.00033299 -0.05621 -3.2339E-05 0.52257 0.00030065 575.329266126536 95.993 1.05 95.993 95.621 96.671 0 62 21 5 0 0 0 1.4203E-07 1 113909 126.07 100.51 1 54668000 217 1752 205 206 248 248 AALSASEGEEVPQDK 15 Unmodified _AALSASEGEEVPQDK_ 0 0 0 O95831 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 765.868774414062 2 765.867742 1529.72093 0.98781 0.00075653 0.03334 2.5534E-05 1.0211 0.00078206 765.867728059265 32.074 0.64256 32.074 31.769 32.411 0 39 12 4 0 0 0 1.2361E-15 1 24257 136.53 125.31 1 43839000 218 601 206 207 249 249 AALSEEELEK 10 Unmodified _AALSEEELEK_ 0 0 0 Q04637 Q04637 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 MULTI-MSMS 210214_Eclipse_Hela_QC 559.782348632812 2 559.782418 1117.55028 0.26409 0.00014783 -0.23112 -0.00012938 0.032975 1.8459E-05 559.782355737065 33.206 0.86601 33.206 32.71 33.576 0 29 17 2 0 0 0 4.7444E-09 1 25853 155.07 132.68 1 55254000 219 1847 207 208 250 250 AALSLPAK 8 Unmodified _AALSLPAK_ 0 0 0 Q14978 Q14978 Q14978 NOLC1 Nucleolar and coiled-body phosphoprotein 1 MSMS 210214_Eclipse_Hela_QC 385.742065429688 2 385.742171 769.469789 NaN NaN NaN NaN NaN NaN NaN 32.712 1 32.712 32.212 33.212 0 0 0 0 0.029079 1 25286 62.659 34.344 1 220 2121 208 209 251 251 AALSSFQK 8 Unmodified _AALSSFQK_ 0 0 0 P61201 P61201 P61201 COPS2 COP9 signalosome complex subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 426.234039306641 2 426.23471 850.454868 -0.89908 -0.00038322 0.42542 0.00018133 -0.47366 -0.00020189 426.234840529251 25.338 0.29816 25.338 25.214 25.512 0 7 5 2 0 0 0 0.0060755 1 14783 77.058 44.587 1 5917000 221 1608 209 210 252 252 AALTAEHFAALQSLLK 16 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AALTAEHFAALQSLLK_ 1 0 0 Q9P000 Q9P000 Q9P000 COMMD9 COMM domain-containing protein 9 MULTI-MSMS 210214_Eclipse_Hela_QC 863.481994628906 2 863.480337 1724.94612 1.2615 0.0010892 2.0037 0.0017301 3.2651 0.0028194 863.483942440128 107.19 0.59709 107.19 106.71 107.31 0 19 11 3 0 0 0 0.00027707 1 129616 68.355 52.102 1 15215000 222 3776 210 211 253 253 AALTGLLHR 9 Unmodified _AALTGLLHR_ 0 0 0 P55084 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase MULTI-MSMS 210214_Eclipse_Hela_QC 476.290130615234 2 476.290351 950.566149 -0.20748 -9.8822E-05 2.5106 0.0011958 2.3031 0.0010969 476.290388341881 38.315 1.2391 38.315 37.745 38.984 0 63 24 4 0 0 0 8.4545E-16 1 33489 190.08 148.43 1 29233000 223 1533 211 212 254 254 AALTIDEK 8 Unmodified _AALTIDEK_ 0 0 0 CON__P34955 CON__P34955 CON__P34955 MULTI-MSMS 210214_Eclipse_Hela_QC 430.739379882812 2 430.739825 859.465098 -0.20029 -8.6274E-05 -0.49438 -0.00021295 -0.69467 -0.00029922 430.739660471294 27.428 0.69058 27.428 27.154 27.845 0 46 13 4 0 0 0 0.0014453 1 17607 111.01 68.779 1 763200000 + 224 69 212 213 255 255 AALVAQNYINYQQGTPHR 18 Unmodified _AALVAQNYINYQQGTPHR_ 0 0 0 Q9BS40 Q9BS40 Q9BS40 LXN Latexin MULTI-MSMS 210214_Eclipse_Hela_QC 682.354125976562 3 682.016817 2043.02862 0.8681 0.00059206 1.1309 0.00077129 1.999 0.0013633 682.352926912123 52.536 0.64735 52.536 52.195 52.842 0 34 12 4 0 0 0 0.00032568 1 53418 52.52 43.356 1 9053300 225 3252 213 214 256 256 AALVDLEPGTMDSVR 15 Unmodified _AALVDLEPGTMDSVR_ 0 0 0 Q9BUF5 Q9BUF5 Q9BUF5 TUBB6 Tubulin beta-6 chain MULTI-MSMS 210214_Eclipse_Hela_QC 787.399108886719 2 787.398155 1572.78176 1.2555 0.00098854 0.52366 0.00041233 1.7791 0.0014009 787.899860637908 75.913 0.57784 75.913 75.651 76.229 0 30 11 3 0 0 0 0.052827 1 86112 40.015 14.63 1 26739000 226 3286 214 215 257 257 AALVLEDGSVLR 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AALVLEDGSVLR_ 1 0 0 P27708 P27708 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 210214_Eclipse_Hela_QC 642.862365722656 2 642.861534 1283.70852 0.76921 0.0004945 -0.34048 -0.00021888 0.42873 0.00027562 642.861359577982 107.88 0.54871 107.88 107.71 108.26 0 18 10 4 0 0 0 6.5542E-12 1 130488 143.03 58.419 1 17443000 227 1077 215 216 258 258 AAMAVGGAGGSR 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAMAVGGAGGSR_ 1 0 0 O14744 O14744 O14744 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 523.755920410156 2 523.756015 1045.49748 0.30318 0.00015879 0.24822 0.00013001 0.5514 0.0002888 523.756120198968 43.269 0.84654 43.269 42.895 43.742 0 25 16 2 0 0 0 0.0025747 1 40264 51.268 18.427 1 5315400 228 205 216 217 259 259 AAMDNSEIAGEK 12 Unmodified _AAMDNSEIAGEK_ 0 0 0 Q16891 Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 210214_Eclipse_Hela_QC 618.282287597656 2 618.28226 1234.54997 0.21384 0.00013221 0.019021 1.176E-05 0.23286 0.00014397 618.282428853338 24.442 0.44703 24.442 24.22 24.667 0 21 8 4 0 0 0 0.0008415 1 13414 66.758 55.536 1 29207000 229 2262 217 218 260 260 AAMEALVVEVTK 12 Unmodified _AAMEALVVEVTK_ 0 0 0 Q08211 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 210214_Eclipse_Hela_QC 630.846435546875 2 630.847039 1259.67952 0.27516 0.00017358 0.052884 3.3361E-05 0.32804 0.00020695 630.847232986819 74.937 1.0467 74.937 74.654 75.701 0 61 20 4 0 0 0 7.0143E-08 1 84743 119.53 103.9 1 34380000 230 1882 218 219 261 261 AAMEPIVISAK 11 Unmodified _AAMEPIVISAK_ 0 0 0 Q9Y490 Q9Y490 Q9Y490 TLN1 Talin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 565.8203125 2 565.317917 1128.62128 1.184 0.00066933 0.093735 5.299E-05 1.2777 0.00072232 565.317842781032 53.971 0.8855 53.971 53.59 54.476 0 34 17 4 0 0 0 0.0025538 1 55306 61.56 53.141 1 13983000 231 4084 219 220 262 262 AAMFTAGSNFNHVVQNEK 18 Unmodified _AAMFTAGSNFNHVVQNEK_ 0 0 0 O60725 O60725 O60725 ICMT Protein-S-isoprenylcysteine O-methyltransferase MULTI-MSMS 210214_Eclipse_Hela_QC 655.982849121094 3 655.647625 1963.92104 1.0294 0.00067489 0.34619 0.00022698 1.3755 0.00090187 655.648064732529 50.22 0.49788 50.22 49.981 50.479 0 29 9 4 0 0 0 0.039613 1 50298 20.949 10.61 1 6764000 232 391 220 221 263 263 AANAAENDFSVSQAEMSSR 19 Unmodified _AANAAENDFSVSQAEMSSR_ 0 0 0 Q8NE71 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 210214_Eclipse_Hela_QC 992.936584472656 2 992.936893 1983.85923 0.94056 0.00093392 0.043872 4.3562E-05 0.98443 0.00097748 992.937278065868 52.505 0.59754 52.505 52.195 52.793 0 40 11 5 0 0 0 3.7459E-13 1 53233 130.24 117.23 1 17273000 233 2754 221 222 264 264 AANATTNPSQLLPLELVDK 19 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AANATTNPSQLLPLELVDK_ 1 0 0 Q9Y4Y9 Q9Y4Y9 Q9Y4Y9 LSM5 U6 snRNA-associated Sm-like protein LSm5 MULTI-MSMS 210214_Eclipse_Hela_QC 1019.04779052734 2 1019.04677 2036.07899 1.7832 0.0018172 -1.0306 -0.0010503 0.75258 0.00076691 1019.54723980802 109.08 0.49763 109.08 108.9 109.4 0 29 9 6 0 0 0 3.779E-57 1 132107 198.85 186.68 1 76016000 234 4097 222 223 265 265 AANDAGYFNDEMAPIEVK 18 Unmodified _AANDAGYFNDEMAPIEVK_ 0 0 0 P42765 P42765 P42765 ACAA2 3-ketoacyl-CoA thiolase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 977.946594238281 2 977.946198 1953.87784 1.4801 0.0014475 0.35486 0.00034703 1.835 0.0017945 978.448146584843 79.296 0.79601 79.296 78.965 79.761 0 66 15 6 0 0 0 0.00033257 1 90663 57.804 55.438 1 89922000 235 1279 223 224 266 266 AANGVVLATEK 11 Unmodified _AANGVVLATEK_ 0 0 0 P25787 P25787 P25787 PSMA2 Proteasome subunit alpha type-2 MULTI-MSMS 210214_Eclipse_Hela_QC 536.802978515625 2 536.803488 1071.59242 0.135 7.2469E-05 -0.22165 -0.00011898 -0.086651 -4.6514E-05 536.803124510099 27.096 0.79574 27.096 26.657 27.452 0 44 15 5 0 0 0 5.7916E-13 1 17320 152.37 75.596 1 65268000 236 1049 224 225 267 267 AANMLQQSGSK 11 Unmodified _AANMLQQSGSK_ 0 0 0 P46063 P46063 P46063 RECQL ATP-dependent DNA helicase Q1 MULTI-MSMS 210214_Eclipse_Hela_QC 568.284057617188 2 567.78223 1133.54991 0.18947 0.00010758 -3.7147 -0.0021091 -3.5252 -0.0020016 567.782052642268 20.656 0.34824 20.656 20.514 20.862 0 19 6 4 0 0 0 2.8714E-05 1 8038 107.79 89.968 1 14576000 237 1302 225 226 268 268 AANNGALPPDLSYIVR 16 Unmodified _AANNGALPPDLSYIVR_ 0 0 0 P08574 P08574 P08574 CYC1 Cytochrome c1, heme protein, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 835.947021484375 2 835.946661 1669.87877 1.3426 0.0011223 0.70705 0.00059105 2.0496 0.0017134 835.947412836527 84.96 1.6407 84.96 84.351 85.991 0 104 32 4 0 0 0 0.00023457 2 99133 85.288 68.263 1 17714000 238 750 226 227 269;270 270 AANNIASLLTK 11 Unmodified _AANNIASLLTK_ 0 0 0 Q9BV44 Q9BV44 Q9BV44 THUMPD3 THUMP domain-containing protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 558.324401855469 2 558.324588 1114.63462 0.65092 0.00036343 -1.1489 -0.00064146 -0.49799 -0.00027804 558.324499604696 61.071 0.94438 61.071 60.697 61.641 0 45 18 4 0 0 0 0.00041528 1 65579 82.749 64.31 1 6613400 239 3303 227 228 271 271 AANPGCSLEDFVR 13 Unmodified _AANPGCSLEDFVR_ 0 0 0 Q15042 Q15042 Q15042 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit MULTI-MSMS 210214_Eclipse_Hela_QC 718.336486816406 2 718.335358 1434.65616 0.66141 0.00047511 -0.36191 -0.00025998 0.29949 0.00021514 718.83629135808 66.708 0.69704 66.708 66.349 67.046 0 23 13 3 0 0 0 0.0089908 2 73360 46.352 34.504 1 4170700 240 2140 228 229 272;273 273 AANPVDFLSK 10 Unmodified _AANPVDFLSK_ 0 0 0 Q8IY81 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MSMS 210214_Eclipse_Hela_QC 531.284912109375 2 531.284931 1060.55531 NaN NaN NaN NaN NaN NaN NaN 62.121 1 62.121 61.621 62.621 0 0 0 0 0.021727 1 66909 57.55 27.743 1 241 2645 229 230 274 274 AANSCTSYSGTTLNLK 16 Unmodified _AANSCTSYSGTTLNLK_ 0 0 0 Q9UPQ0 Q9UPQ0 Q9UPQ0 LIMCH1 LIM and calponin homology domains-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 844.401062011719 2 844.401426 1686.7883 0.97345 0.00082198 -0.1678 -0.00014169 0.80565 0.00068029 844.401076614892 44.102 0.94553 44.102 43.394 44.339 0 29 18 3 0 0 0 0.057068 1 41745 38.021 28.832 1 8289200 242 3972 230 231 275 275 AANSLEAFIFETQDK 15 Unmodified _AANSLEAFIFETQDK_ 0 0 0 Q9Y4L1 Q9Y4L1 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 842.41552734375 2 842.414859 1682.81517 1.2469 0.0010504 0.14831 0.00012494 1.3952 0.0011754 842.415021387681 95.668 1.3976 95.668 94.975 96.372 0 71 28 5 0 0 0 5.2308E-16 1 113498 144.47 110.61 1 23875000 243 4089 231 232 276 276 AANVLLSEHGEVK 13 Unmodified _AANVLLSEHGEVK_ 0 0 0 Q9Y6E0 Q9Y6E0 Q9Y6E0 STK24 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit MULTI-MSMS 210214_Eclipse_Hela_QC 456.249176025391 3 456.249019 1365.72523 -0.023634 -1.0783E-05 0.26795 0.00012225 0.24431 0.00011147 456.583398533461 29.569 0.54699 29.569 29.28 29.827 0 25 10 4 0 0 0 0.027644 1 20722 30.961 24.705 1 7634200 244 4151 232 233 277 277 AANVLLSEHGEVK 13 Unmodified _AANVLLSEHGEVK_ 0 0 0 Q9Y6E0 Q9Y6E0 Q9Y6E0 STK24 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 36 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit MULTI-MSMS 210214_Eclipse_Hela_QC 683.870910644531 2 683.869891 1365.72523 0.50934 0.00034832 0.70554 0.0004825 1.2149 0.00083082 683.869927137049 29.554 0.49724 29.554 29.28 29.778 0 16 9 2 0 0 0 0.012316 1 20742 55.353 41.146 1 5453800 245 4151 232 233 278 278 AANVLLSEQGDVK 13 Unmodified _AANVLLSEQGDVK_ 0 0 0 Q9P289;O00506 Q9P289 Q9P289 STK26;STK25 Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 25 MULTI-MSMS 210214_Eclipse_Hela_QC 672.363159179688 2 672.361899 1342.70924 1.0957 0.00073671 -0.019748 -1.3278E-05 1.076 0.00072344 672.361849011703 43.884 1.0435 43.884 43.543 44.587 0 32 20 3 0 0 0 0.00020127 1 41074 99.568 85.875 1 13388000 246 3800 233 234 279 279 AANVTLLTSLVEGEAVHLAR 20 Unmodified _AANVTLLTSLVEGEAVHLAR_ 0 0 0 P05549;Q6VUC0;Q92481 P05549 P05549 TFAP2A;TFAP2E;TFAP2B Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2-beta MULTI-MSMS 210214_Eclipse_Hela_QC 688.719970703125 3 688.719778 2063.1375 1.346 0.00092703 -0.50659 -0.0003489 0.83944 0.00057814 688.71946053345 105.27 0.24902 105.27 105.13 105.38 0 12 4 4 0 0 0 0.00040229 1 126946 49.973 44.643 1 9484800 247 690 234 235 280 280 AAPASIPPFPVLEPVTSCK 19 Unmodified _AAPASIPPFPVLEPVTSCK_ 0 0 0 CON__Q3SZ57 CON__Q3SZ57 CON__Q3SZ57 MULTI-MSMS 210214_Eclipse_Hela_QC 991.530029296875 2 991.026794 1980.03903 1.0421 0.0010328 0.16332 0.00016185 1.2054 0.0011946 991.528613648267 99.424 1.2931 99.424 98.859 100.15 0 96 25 5 0 0 0 0.0011603 2 119154 49.483 43.511 1 20478000 + 248 100 235 236 281;282 282 AAPCIYWLPLTDSQIVQK 18 Unmodified _AAPCIYWLPLTDSQIVQK_ 0 0 0 Q9UKV3 Q9UKV3 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus MULTI-MSMS 210214_Eclipse_Hela_QC 1052.5537109375 2 1052.0508 2102.08705 1.0687 0.0011243 -0.28318 -0.00029792 0.7855 0.00082638 1052.55189859504 105.76 0.3988 105.76 105.63 106.02 0 19 7 4 0 0 0 0.00023176 1 127587 92.781 82.137 1 50706000 249 3917 236 237 283 283 AAPEASSPPASPLQHLLPGK 20 Unmodified _AAPEASSPPASPLQHLLPGK_ 0 0 0 Q96TA1 Q96TA1 Q96TA1 FAM129B Niban-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 657.024841308594 3 656.689818 1967.04763 0.081653 5.3621E-05 0.061762 4.0559E-05 0.14341 9.4179E-05 656.689857752657 65.995 0.69682 65.995 65.652 66.349 0 50 13 5 0 0 0 0.001259 1 72118 38.453 35.855 1 19817000 250 3151 237 238 284 284 AAPEMVSLLK 10 Unmodified _AAPEMVSLLK_ 0 0 0 Q92947 Q92947 Q92947 GCDH Glutaryl-CoA dehydrogenase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 529.800109863281 2 529.79936 1057.58417 0.35067 0.00018579 1.3684 0.00072499 1.7191 0.00091077 529.79982170197 64.93 0.6974 64.93 64.556 65.254 0 31 13 3 0 0 0 0.041617 1 71150 36.557 18.571 1 7519400 251 2926 238 239 285 285 AAPFSLEYR 9 Unmodified _AAPFSLEYR_ 0 0 0 Q15181 Q15181 Q15181 PPA1 Inorganic pyrophosphatase MULTI-MSMS 210214_Eclipse_Hela_QC 527.272277832031 2 527.271824 1052.5291 0.74826 0.00039454 -0.34257 -0.00018063 0.40569 0.00021391 527.271922426997 57.835 1.1446 57.835 57.462 58.606 0 62 22 5 0 0 0 4.1942E-05 1 60678 123.69 100.67 1 109820000 252 2162 239 240 286 286 AAPGAEFAPNK 11 Unmodified _AAPGAEFAPNK_ 0 0 0 Q15233 Q15233 Q15233 NONO Non-POU domain-containing octamer-binding protein MULTI-MSMS 210214_Eclipse_Hela_QC 536.775085449219 2 536.774731 1071.53491 0.24942 0.00013388 0.10174 5.4613E-05 0.35117 0.0001885 536.774768934284 26.98 0.89489 26.98 26.707 27.601 0 36 17 3 0 0 0 4.8569E-08 1 16977 131.41 107.62 1 135140000 253 2165 240 241 287 287 AAPGPALCLFDVDGTLTAPR 20 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAPGPALCLFDVDGTLTAPR_ 1 0 0 O15305 O15305 O15305 PMM2 Phosphomannomutase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 1043.03063964844 2 1042.52769 2083.04083 1.5752 0.0016422 -0.17984 -0.00018749 1.3954 0.0014547 1043.02899065298 110.7 0.44842 110.7 110.5 110.95 0 28 8 5 0 0 0 1.0586E-07 1 134458 99.705 79.042 1 24912000 254 260 241 242 288 288 AAPGPGPSTFSFVPPSK 17 Unmodified _AAPGPGPSTFSFVPPSK_ 0 0 0 P35658 P35658 P35658 NUP214 Nuclear pore complex protein Nup214 MULTI-MSMS 210214_Eclipse_Hela_QC 822.926391601562 2 822.42503 1642.83551 1.1657 0.00095869 -0.20485 -0.00016848 0.96084 0.00079022 822.92652092676 71.614 0.84666 71.614 71.218 72.065 0 56 16 5 0 0 0 0.015264 1 80045 35.737 26.082 1 6623300 255 1196 242 243 289 289 AAPLAAPPPAPAAPPAVAPPAGPR 24 Unmodified _AAPLAAPPPAPAAPPAVAPPAGPR_ 0 0 0 Q6SPF0 Q6SPF0 Q6SPF0 SAMD1 Atherin MULTI-MSMS 210214_Eclipse_Hela_QC 1063.60229492188 2 1063.09947 2124.18439 1.1608 0.0012341 0.051297 5.4534E-05 1.2121 0.0012886 1063.09935339976 72.682 0.44835 72.682 72.413 72.861 0 20 8 3 0 0 0 0.00044079 1 81808 50.563 45.579 1 1806700 256 2472 243 244 290 290 AAPMTPAARPEDYEAALNAALADVPELAR 29 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAPMTPAARPEDYEAALNAALADVPELAR_ 1 0 1 Q04446 Q04446 Q04446 GBE1 1,4-alpha-glucan-branching enzyme MULTI-SECPEP 210214_Eclipse_Hela_QC 1012.57928466797 3 1012.84135 3035.50223 1.1394 0.001154 1.006 0.0010189 2.1453 0.0021729 1013.1769333002 109.68 0.19951 109.68 109.55 109.75 0 14 3 5 0 0 0 3.6122E-06 1 132919 71.528 64.879 1 11009000 257 1846 244 245 291 291 AAPPEPGEPEER 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAPPEPGEPEER_ 1 0 0 Q5RI15 Q5RI15 Q5RI15 COX20 Cytochrome c oxidase protein 20 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 660.807312011719 2 660.806956 1319.59936 0.63582 0.00042015 0.013172 8.7044E-06 0.64899 0.00042886 660.806928792997 43.239 0.54856 43.239 42.945 43.494 0 20 10 3 0 0 0 0.0080393 1 40323 42.001 30.153 1 4504100 258 2338 245 246 292 292 AAPPGEYFSVGSQVSCR 17 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAPPGEYFSVGSQVSCR_ 1 0 0 Q3MHD2 Q3MHD2 Q3MHD2 LSM12 Protein LSM12 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 927.428527832031 2 927.427975 1852.8414 1.5128 0.001403 0.81061 0.00075178 2.3234 0.0021548 927.429008338183 87.921 1.0446 87.921 87.234 88.279 0 64 20 5 0 0 0 0.0026433 1 103224 40.066 30.744 1 13482000 259 2279 246 247 293 293 AAPRPAPVAQPPAAAPPSAVGSSAAAPR 28 Unmodified _AAPRPAPVAQPPAAAPPSAVGSSAAAPR_ 0 0 1 Q9Y6H1;Q5T1J5 Q9Y6H1 Q9Y6H1 CHCHD2;CHCHD2P9 Coiled-coil-helix-coiled-coil-helix domain-containing protein 2;Putative coiled-coil-helix-coiled-coil-helix domain-containing protein CHCHD2P9, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 845.460998535156 3 845.125978 2532.3561 0.85337 0.0007212 0.56169 0.00047469 1.4151 0.0011959 845.461027999332 45.824 0.74694 45.824 45.433 46.18 0 47 14 5 0 0 0 4.9638E-07 1 43931 59.282 56.359 1 7729800 260 2352 247 248 294 294 AAPSGGVNCEEFAEFQELLK 20 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAPSGGVNCEEFAEFQELLK_ 1 0 0 Q4VC31 Q4VC31 Q4VC31 CCDC58 Coiled-coil domain-containing protein 58 MULTI-MSMS 210214_Eclipse_Hela_QC 1120.02429199219 2 1119.5228 2237.03105 0.83797 0.00093813 0.98284 0.0011003 1.8208 0.0020384 1120.02561961637 109.63 0.34924 109.63 109.5 109.85 0 18 6 5 0 0 0 1.0959E-09 1 132896 131.66 124.46 1 26933000 261 2292 248 249 295 295 AAPTAASDQPDSAATTEK 18 Unmodified _AAPTAASDQPDSAATTEK_ 0 0 0 Q9BRP8 Q9BRP8 Q9BRP8 WIBG Partner of Y14 and mago MULTI-MSMS 210214_Eclipse_Hela_QC 866.405944824219 2 866.40522 1730.79589 0.97162 0.00084182 0.33242 0.00028801 1.304 0.0011298 866.405576912542 21.364 0.34868 21.364 21.161 21.509 0 18 6 4 0 0 0 7.5474E-18 1 9033 136.24 123.67 1 9959300 262 3239 249 250 296 296 AAPVDLELK 9 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAPVDLELK_ 1 0 0 O60925 O60925 O60925 PFDN1 Prefoldin subunit 1 MULTI-SECPEP 210214_Eclipse_Hela_QC 997.482604980469 1 997.556438 996.549162 1.1022 0.0010995 0.24908 0.00024847 1.3513 0.001348 997.556678146164 83.894 0.54794 83.894 83.653 84.201 0 25 10 3 0 0 0 0.0061165 1 97409 103.83 82.533 1 9353600 263 410 250 251 297 297 AAPVTGGMGAVLMR 14 Unmodified _AAPVTGGMGAVLMR_ 0 0 0 P18583 P18583 P18583 SON Protein SON MULTI-MSMS 210214_Eclipse_Hela_QC 665.853393554688 2 665.852132 1329.68971 0.87571 0.0005831 -0.77808 -0.00051809 0.09763 6.5007E-05 665.85223531975 64.871 0.39803 64.871 64.606 65.004 0 21 7 3 0 0 0 0.0008588 1 70675 59.426 47.936 1 3660200 264 953 251 252 298 298 AAQAPSSFQLLYDLK 15 Unmodified _AAQAPSSFQLLYDLK_ 0 0 0 P11586 P11586 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 826.941345214844 2 826.438138 1650.86172 1.7656 0.0014591 0.71419 0.00059024 2.4798 0.0020494 826.43897429078 92.886 1.1929 92.886 92.444 93.637 0 85 23 6 0 0 0 2.164E-05 1 109423 121.02 114.36 1 73106000 265 837 252 253 299 299 AAQDFFSTCR 10 Unmodified _AAQDFFSTCR_ 0 0 0 P06132 P06132 P06132 UROD Uroporphyrinogen decarboxylase MULTI-MSMS 210214_Eclipse_Hela_QC 601.767272949219 2 601.76658 1201.51861 0.62364 0.00037528 0.1112 6.6914E-05 0.73483 0.0004422 601.766601813564 46.625 0.89507 46.625 46.18 47.075 0 49 17 4 0 0 0 0.00028117 1 44845 96.331 67.433 1 13263000 266 694 253 254 300 300 AAQDRDQIYR 10 Unmodified _AAQDRDQIYR_ 0 0 1 P62995 P62995 P62995 TRA2B Transformer-2 protein homolog beta MULTI-MSMS 210214_Eclipse_Hela_QC 618.310546875 2 618.31 1234.60545 1.2204 0.00075461 0.27695 0.00017124 1.4974 0.00092585 618.310158272304 17.988 1.9162 17.988 16.291 18.207 0 475 174 4 0 0 0 0.01344 1 3706 81.594 61.808 1 13099000 267 1702 254 255 301 301 AAQDRDQIYR 10 Unmodified _AAQDRDQIYR_ 0 0 1 P62995 P62995 P62995 TRA2B Transformer-2 protein homolog beta MULTI-MSMS 210214_Eclipse_Hela_QC 412.543182373047 3 412.542426 1234.60545 0.89407 0.00036884 -0.16349 -6.7445E-05 0.73058 0.0003014 412.542349282611 17.986 1.9982 17.986 16.291 18.289 0 419 177 3 0 0 0 0.0020779 1 3745 63.283 53.628 1 16400000 268 1702 254 255 302 302 AAQGEPQVQFK 11 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAQGEPQVQFK_ 1 0 0 P62826 P62826 P62826 RAN GTP-binding nuclear protein Ran MULTI-MSMS 210214_Eclipse_Hela_QC 623.301452636719 2 622.817127 1243.6197 0.56348 0.00035095 0.12826 7.9884E-05 0.69174 0.00043083 622.817128742174 56.442 1.5921 56.442 55.67 57.262 0 94 31 5 0 0 0 3.018E-17 2 58834 169.12 144.35 1 254340000 269 1678 255 256 303;304 303 AAQHGVCSVLK 11 Unmodified _AAQHGVCSVLK_ 0 0 0 Q5JTH9 Q5JTH9 Q5JTH9 RRP12 RRP12-like protein MSMS 210214_Eclipse_Hela_QC 585.308532714844 2 585.308415 1168.60228 NaN NaN NaN NaN NaN NaN NaN 21.707 1 21.707 21.207 22.207 0 0 0 0 0.0020886 1 9538 88.948 38.822 1 270 2329 256 257 305 305 AAQLEPITYMQGLSACEQIR 20 Unmodified _AAQLEPITYMQGLSACEQIR_ 0 0 0 Q9HBH0 Q9HBH0 Q9HBH0 RHOF Rho-related GTP-binding protein RhoF MULTI-MSMS 210214_Eclipse_Hela_QC 1140.56604003906 2 1140.06157 2278.10859 1.4083 0.0016056 0.099599 0.00011355 1.5079 0.0017191 1140.56330475032 93.811 0.59689 93.811 93.438 94.035 0 34 11 4 0 0 0 1.464E-06 1 110847 87.18 82.711 1 6157900 271 3547 257 258 306 306 AAQLIGTCSQNVAAIQEQVLGLGALR 26 Unmodified _AAQLIGTCSQNVAAIQEQVLGLGALR_ 0 0 0 Q9NZL4 Q9NZL4 Q9NZL4 HSPBP1 Hsp70-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1341.72741699219 2 1341.22379 2680.43303 1.6534 0.0022176 -0.22592 -0.000303 1.4275 0.0019146 1341.72479769883 106.53 0.14957 106.53 106.42 106.57 0 10 2 5 0 0 0 7.8518E-70 1 128661 204.72 193.03 1 27462000 272 3766 258 259 307 307 AAQQQEEQEEKEEEDDEQTLHR 22 Unmodified _AAQQQEEQEEKEEEDDEQTLHR_ 0 0 1 P78318 P78318 P78318 IGBP1 Immunoglobulin-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 675.798461914062 4 675.547036 2698.15904 0.69154 0.00046717 0.022976 1.5521E-05 0.71451 0.00048269 675.797665566668 24.319 0.3339 24.319 24.135 24.469 0 23 6 5 0 0 0 0.041155 1 13346 20.921 20.155 1 12896000 273 1741 259 260 308 308 AAQQQEEQEEKEEEDDEQTLHR 22 Unmodified _AAQQQEEQEEKEEEDDEQTLHR_ 0 0 1 P78318 P78318 P78318 IGBP1 Immunoglobulin-binding protein 1 MSMS 210214_Eclipse_Hela_QC 900.394287109375 3 900.393623 2698.15904 NaN NaN NaN NaN NaN NaN NaN 24.336 1 24.336 23.836 24.836 0 0 0 0 0.00010983 1 13317 63.69 58.37 1 274 1741 259 260 309 309 AAQSLLNK 8 Unmodified _AAQSLLNK_ 0 0 0 Q9NUU7;Q9UMR2 Q9NUU7 Q9NUU7 DDX19A;DDX19B ATP-dependent RNA helicase DDX19A;ATP-dependent RNA helicase DDX19B MULTI-MSMS 210214_Eclipse_Hela_QC 422.748107910156 2 422.747985 843.481417 0.097157 4.1073E-05 0.27024 0.00011424 0.3674 0.00015532 422.74804478651 22.631 0.64731 22.631 22.305 22.952 0 22 12 3 0 0 0 0.0030104 1 10881 94.262 40.91 1 16336000 275 3665 260 261 310 310 AAQTAEDAMQIMEQMTK 17 Unmodified _AAQTAEDAMQIMEQMTK_ 0 0 0 P30622 P30622 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 949.431457519531 2 948.928636 1895.84272 1.4255 0.0013527 0.1517 0.00014395 1.5772 0.0014966 949.430218343508 96.756 0.54716 96.756 96.422 96.969 0 32 10 4 0 0 0 0.00046792 1 115048 53.967 50.838 1 3512800 276 1131 261 262 311 311 AAQVAQDEEIAR 12 Unmodified _AAQVAQDEEIAR_ 0 0 0 Q8IVM0 Q8IVM0 Q8IVM0 CCDC50 Coiled-coil domain-containing protein 50 MULTI-SECPEP 210214_Eclipse_Hela_QC 650.634582519531 2 650.828223 1299.64189 0.48054 0.00031275 4.2857 0.0027893 4.7662 0.003102 651.33422345953 25.945 0.64664 25.945 25.611 26.258 0 21 12 3 0 0 0 0.018478 1 15528 73.885 56.654 1 11500000 277 2620 262 263 312 312 AAQVGLLFLK 10 Unmodified _AAQVGLLFLK_ 0 0 0 Q6NXR4 Q6NXR4 Q6NXR4 TTI2 TELO2-interacting protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 530.332336425781 2 530.331685 1058.64882 0.87316 0.00046306 0.3022 0.00016027 1.1754 0.00062333 530.331682229257 81.178 0.54736 81.178 80.854 81.402 0 22 10 3 0 0 0 0.0071067 1 93598 53.166 35.781 1 2638900 278 2434 263 264 313 313 AAQVMGPPDR 10 Unmodified _AAQVMGPPDR_ 0 0 0 Q96I24 Q96I24 Q96I24 FUBP3 Far upstream element-binding protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 521.260314941406 2 521.260933 1040.50731 -0.14717 -7.6715E-05 0.44079 0.00022977 0.29362 0.00015305 521.261513409817 24.229 0.66813 24.229 24.048 24.717 0 21 13 3 0 0 0 0.00025502 1 13099 97.635 62.017 1 11164000 279 3060 264 265 314 314 AAQVTIQSSGTFSTK 15 Unmodified _AAQVTIQSSGTFSTK_ 0 0 0 CON__ENSEMBL:ENSBTAP00000024146 CON__ENSEMBL:ENSBTAP00000024146 CON__ENSEMBL:ENSBTAP00000024146 MULTI-MSMS 210214_Eclipse_Hela_QC 763.397827148438 2 763.39647 1524.77839 0.99795 0.00076183 0.25363 0.00019362 1.2516 0.00095545 763.3966887254 41.853 1.3397 41.853 41.456 42.796 0 64 26 4 0 0 0 0.00019856 2 38849 88.187 75.231 1 15540000 + 280 38 265 266 315;316 316 AAQYQVNQAAAAQAAATAAAMTQSAVK 27 Unmodified _AAQYQVNQAAAAQAAATAAAMTQSAVK_ 0 0 0 Q9NR56 Q9NR56 Q9NR56 MBNL1 Muscleblind-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1304.15881347656 2 1303.6532 2605.29185 2.5173 0.0032817 0.38394 0.00050053 2.9012 0.0037822 1304.15546567063 92.969 0.49776 92.969 92.693 93.191 0 32 9 5 0 0 0 0.00053122 1 109810 65.716 61.545 1 3777600 281 3617 266 267 317 317 AASAAAASAAAASAASGSPGPGEGSAGGEK 30 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AASAAAASAAAASAASGSPGPGEGSAGGEK_ 1 0 0 Q13263 Q13263 Q13263 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 210214_Eclipse_Hela_QC 1215.06384277344 2 1215.0624 2428.11024 1.1171 0.0013573 -0.079883 -9.7063E-05 1.0372 0.0012602 1215.56381771879 71.946 0.69633 71.946 71.667 72.363 0 48 13 4 0 0 0 6.6937E-111 1 80494 245.66 240.68 1 18764000 282 1966 267 268 318 318 AASAAGAAGSAGGSSGAAGAAGGGAGAGTRPGDGGTASAGAAGPGAATK 49 Unmodified _AASAAGAAGSAGGSSGAAGAAGGGAGAGTRPGDGGTASAGAAGPGAATK_ 0 0 1 Q9UKY7 Q9UKY7 Q9UKY7 CDV3 Protein CDV3 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 1224.24523925781 3 1223.91139 3668.71233 0.22277 0.00027265 0.2642 0.00032336 0.48697 0.00059601 1224.5804092385 28.512 0.50601 28.512 28.288 28.794 0 43 10 6 0 0 0 1.172E-17 1 19343 81.772 79.858 1 59512000 283 3920 268 269 319 319 AASAATAAPTATPAAQESGTIPK 23 Unmodified _AASAATAAPTATPAAQESGTIPK_ 0 0 0 O00116 O00116 O00116 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal MULTI-MSMS 210214_Eclipse_Hela_QC 1042.541015625 2 1042.03693 2082.05931 0.82182 0.00085637 0.16242 0.00016925 0.98424 0.0010256 1042.53871713005 42.642 0.54745 42.642 42.398 42.945 0 39 10 5 0 0 0 2.3315E-17 1 39340 121.45 101.35 1 20679000 284 125 269 270 320 320 AASADSTTEGTPADGFTVLSTK 22 Unmodified _AASADSTTEGTPADGFTVLSTK_ 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 210214_Eclipse_Hela_QC 1064.00988769531 2 1064.00804 2126.00152 1.1968 0.0012734 0.071445 7.6018E-05 1.2682 0.0013494 1064.50955882518 67.734 0.94318 67.734 67.363 68.306 0 77 18 6 0 0 0 9.8928E-05 1 74577 62.055 49.89 1 102870000 285 443 270 271 321 321 AASAFFTYVSLSQEGR 16 Unmodified _AASAFFTYVSLSQEGR_ 0 0 0 O00154 O00154 O00154 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase MULTI-MSMS 210214_Eclipse_Hela_QC 867.429077148438 2 867.428301 1732.84205 1.2605 0.0010934 -0.54456 -0.00047236 0.71594 0.00062102 867.428418638985 88.705 0.84444 88.705 88.418 89.263 0 55 16 5 0 0 0 2.6374E-05 1 103880 94.191 75.567 1 15614000 286 129 271 272 322 322 AASAGQEPLHNEELAGAGR 19 Unmodified _AASAGQEPLHNEELAGAGR_ 0 0 0 Q96HY6 Q96HY6 Q96HY6 DDRGK1 DDRGK domain-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 626.975708007812 3 626.641527 1876.90275 0.22159 0.00013886 -0.1138 -7.1315E-05 0.10779 6.7544E-05 626.975704837342 29.166 0.53562 29.166 28.944 29.479 0 26 10 4 0 0 0 6.2659E-06 1 20228 83.253 77.71 1 12582000 287 3058 272 273 323 323 AASCVLLHTGQK 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AASCVLLHTGQK_ 1 0 0 P14550 P14550 P14550 AKR1A1 Alcohol dehydrogenase [NADP(+)] MULTI-MSMS 210214_Eclipse_Hela_QC 663.845458984375 2 663.845361 1325.67617 1.2683 0.00084197 0.092784 6.1594E-05 1.3611 0.00090357 663.845535660642 50.186 0.64739 50.186 49.831 50.479 0 35 12 3 0 0 0 2.2205E-05 1 49884 99.53 76.102 1 31393000 288 881 273 274 324 324 AASDIAMTELPPTHPIR 17 Unmodified _AASDIAMTELPPTHPIR_ 0 0 0 P62258 P62258 P62258 YWHAE 14-3-3 protein epsilon MULTI-MSMS 210214_Eclipse_Hela_QC 607.317443847656 3 607.317216 1818.92982 0.65946 0.0004005 0.1541 9.3585E-05 0.81356 0.00049409 607.317451490094 59.775 2.1401 59.775 58.656 60.796 0 174 42 5 0 0 0 2.5784E-05 4 63821 84.14 78.108 1 69773000 289 1649 274 275 325;326;327;328 326 AASDIAMTELPPTHPIR 17 Unmodified _AASDIAMTELPPTHPIR_ 0 0 0 P62258 P62258 P62258 YWHAE 14-3-3 protein epsilon MULTI-MSMS 210214_Eclipse_Hela_QC 910.975158691406 2 910.472186 1818.92982 1.2813 0.0011666 -0.19066 -0.00017359 1.0906 0.00099299 910.472134108937 59.683 1.4933 59.683 59.055 60.548 0 73 29 4 0 0 0 0.00038092 3 63914 77.593 71.353 1 5078600 290 1649 274 275 329;330;331 330 AASGFNAMEDAQTLR 15 Unmodified _AASGFNAMEDAQTLR_ 0 0 0 P09525 P09525 P09525 ANXA4 Annexin A4 MULTI-MSMS 210214_Eclipse_Hela_QC 791.871704101562 2 791.369929 1580.72531 1.3109 0.0010374 0.47142 0.00037307 1.7824 0.0014105 791.37171718889 58.335 1.0454 58.335 57.761 58.806 0 57 20 6 0 0 0 1.4936E-05 1 61446 98.353 83.088 1 26115000 291 777 275 276 332 332 AASIFGGAK 9 Unmodified _AASIFGGAK_ 0 0 0 P23588 P23588 P23588 EIF4B Eukaryotic translation initiation factor 4B MULTI-MSMS 210214_Eclipse_Hela_QC 411.229705810547 2 411.229428 820.444303 0.0085083 3.4989E-06 -0.0054637 -2.2468E-06 0.0030447 1.2521E-06 411.229431303604 28.968 0.98327 28.968 28.695 29.678 0 63 19 4 0 0 0 3.8037E-05 1 19876 125.01 73.971 1 53804000 292 1028 276 277 333 333 AASITSEVFNK 11 Unmodified _AASITSEVFNK_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MSMS 210214_Eclipse_Hela_QC 583.807067871094 2 583.806228 1165.5979 NaN NaN NaN NaN NaN NaN NaN 48.05 1 48.05 47.55 48.55 0 0 0 0 1.761E-13 1 47081 177.3 139.13 1 293 4111 277 278 334 334 AASLEYDYETIR 12 Unmodified _AASLEYDYETIR_ 0 0 0 Q96N66 Q96N66 Q96N66 MBOAT7 Lysophospholipid acyltransferase 7 MULTI-MSMS 210214_Eclipse_Hela_QC 715.843322753906 2 715.843539 1429.67252 0.84571 0.0006054 0.50465 0.00036125 1.3504 0.00096665 715.843702903202 59.227 0.79489 59.227 58.806 59.601 0 40 15 4 0 0 0 0.00025561 1 62721 82.261 68.807 1 20733000 294 3102 278 279 335 335 AASPQDLAGGYTSSLACHR 19 Unmodified _AASPQDLAGGYTSSLACHR_ 0 0 0 P51948 P51948 P51948 MNAT1 CDK-activating kinase assembly factor MAT1 MULTI-MSMS 210214_Eclipse_Hela_QC 654.976257324219 3 654.642651 1960.90612 1.1341 0.00074243 0.24604 0.00016107 1.3801 0.0009035 654.977107848358 53.274 0.59846 53.274 52.942 53.541 0 30 11 4 0 0 0 0.022225 1 54420 27.7 23.666 1 5364100 295 1460 279 280 336 336 AASQSTQVPTITEGVAAALLLLK 23 Unmodified _AASQSTQVPTITEGVAAALLLLK_ 0 0 0 Q92616 Q92616 Q92616 GCN1L1 Translational activator GCN1 MULTI-MSMS 210214_Eclipse_Hela_QC 1142.15710449219 2 1141.65193 2281.28931 1.4347 0.0016379 0.10506 0.00011995 1.5397 0.0017578 1142.15351223689 110.07 0.34931 110.07 109.9 110.25 0 26 6 6 0 0 0 7.05E-13 1 133517 112.24 105.51 1 29155000 296 2894 280 281 337 337 AASSELPADISK 12 Unmodified _AASSELPADISK_ 0 0 0 Q9C0C2 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein MULTI-MSMS 210214_Eclipse_Hela_QC 594.809020996094 2 594.808968 1187.60338 0.54134 0.000322 0.23246 0.00013827 0.7738 0.00046026 594.80908339001 36.631 0.73912 36.631 36.372 37.111 0 35 14 3 0 0 0 0.050928 1 30913 33.158 10.377 1 7501200 297 3381 281 282 338 338 AASSLLANLWQYNK 14 Unmodified _AASSLLANLWQYNK_ 0 0 0 Q9Y446 Q9Y446 Q9Y446 PKP3 Plakophilin-3 MULTI-MSMS 210214_Eclipse_Hela_QC 790.421508789062 2 789.917372 1577.82019 1.7822 0.0014078 0.55695 0.00043995 2.3392 0.0018478 789.917245580546 94.043 0.54713 94.043 93.787 94.334 0 29 10 4 0 0 0 7.6864E-05 2 111535 87.328 71.757 1 3674300 298 4081 282 283 339;340 340 AASVHTVGEDTEETPHR 17 Unmodified _AASVHTVGEDTEETPHR_ 0 0 0 Q99575 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 MULTI-MSMS 210214_Eclipse_Hela_QC 612.622436523438 3 612.622133 1834.84457 0.0051929 3.1813E-06 0.36634 0.00022443 0.37153 0.00022761 612.956741223917 19.168 0.49759 19.168 18.921 19.419 0 24 9 4 0 0 0 0.0029326 1 5910 27.85 16.237 1 3285600 299 3172 283 284 341 341 AATAAADFTAK 11 Unmodified _AATAAADFTAK_ 0 0 0 Q9Y3F4 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein MULTI-SECPEP 210214_Eclipse_Hela_QC 518.722106933594 2 519.266739 1036.51892 0.20783 0.00010792 0.95481 0.0004958 1.1626 0.00060372 519.26867773781 25.937 1.045 25.937 25.412 26.458 0 41 20 4 0 0 0 0.0061181 1 15548 93.667 60.826 1 42595000 300 4070 284 285 342 342 AATACFGFPK 10 Unmodified _AATACFGFPK_ 0 0 0 Q9UJA5 Q9UJA5 Q9UJA5 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 MULTI-MSMS 210214_Eclipse_Hela_QC 535.260620117188 2 535.260402 1068.50625 0.73102 0.00039129 -1.3108 -0.00070162 -0.57979 -0.00031034 535.25943650227 49.99 0.74348 49.99 49.536 50.279 0 19 14 2 0 0 0 0.046 1 49812 35.872 21.876 1 3526900 301 3894 285 286 343 343 AATAPLLEAVDNLSAFASNPEFSSIPAQISPEGR 34 Unmodified _AATAPLLEAVDNLSAFASNPEFSSIPAQISPEGR_ 0 0 0 Q9Y490 Q9Y490 Q9Y490 TLN1 Talin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 1157.92321777344 3 1157.58612 3469.73653 1.7831 0.0020641 0.67444 0.00078072 2.4575 0.0028448 1157.92088707246 110.32 0.2988 110.32 110.15 110.45 0 13 5 3 0 0 0 0.011239 1 133911 24.473 22.309 1 7940300 302 4084 286 287 344 344 AATASAGAGGIDGKPR 16 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AATASAGAGGIDGKPR_ 1 0 1 Q02978 Q02978 Q02978 SLC25A11 Mitochondrial 2-oxoglutarate/malate carrier protein MULTI-MSMS 210214_Eclipse_Hela_QC 721.373901367188 2 721.373329 1440.73211 0.80197 0.00057852 0.44494 0.00032096 1.2469 0.00089949 721.373004215726 28.871 0.66768 28.871 28.563 29.231 0 38 13 4 0 0 0 2.8233E-39 1 19810 197.07 114.32 1 21366000 303 1836 287 288 345 345 AATECMCNLAMSK 13 Unmodified _AATECMCNLAMSK_ 0 0 0 Q9H3U1 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A MULTI-MSMS 210214_Eclipse_Hela_QC 743.812377929688 2 743.81149 1485.60843 0.73168 0.00054423 0.15982 0.00011888 0.8915 0.00066311 743.811939652241 42.522 0.39798 42.522 42.298 42.696 0 16 7 3 0 0 0 0.0012298 1 39243 59.542 52.414 1 4691500 304 3461 288 289 346 346 AATFFGCIGIDK 12 Unmodified _AATFFGCIGIDK_ 0 0 0 P55263 P55263 P55263 ADK Adenosine kinase MULTI-MSMS 210214_Eclipse_Hela_QC 650.825073242188 2 650.323731 1298.63291 1.0357 0.00067354 -0.1503 -9.7745E-05 0.88539 0.00057579 650.323725786217 79.583 0.54723 79.583 79.264 79.811 0 32 10 4 0 0 0 0.0020231 1 91105 57.836 44.859 1 13961000 305 1539 289 290 347 347 AATGEEVSAEDLGGADLHCR 20 Unmodified _AATGEEVSAEDLGGADLHCR_ 0 0 0 Q9HCC0 Q9HCC0 Q9HCC0 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 686.980529785156 3 686.644609 2056.912 0.98019 0.00067304 -0.020472 -1.4057E-05 0.95972 0.00065898 686.978889584263 47.521 0.64668 47.521 47.175 47.821 0 19 12 2 0 0 0 9.8269E-05 1 46177 58.49 49.074 1 15167000 306 3556 290 291 348 348 AATITPFR 8 Unmodified _AATITPFR_ 0 0 0 Q13423 Q13423 Q13423 NNT NAD(P) transhydrogenase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 438.750946044922 2 438.750527 875.486502 -0.040393 -1.7723E-05 -0.0080151 -3.5166E-06 -0.048408 -2.1239E-05 438.750426360361 37.986 0.79539 37.986 37.696 38.491 0 27 15 2 0 0 0 0.0079309 1 32945 70.67 37.027 1 5494000 307 1982 291 292 349 349 AATIVATSEGSLWGLDR 17 Unmodified _AATIVATSEGSLWGLDR_ 0 0 0 P13861 P13861 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit MULTI-MSMS 210214_Eclipse_Hela_QC 873.9560546875 2 873.954683 1745.89481 1.6465 0.001439 0.57462 0.0005022 2.2211 0.0019412 873.955092341873 85.767 0.34728 85.767 85.544 85.891 0 14 6 3 0 0 0 6.7323E-13 1 99825 133.32 110.4 1 14865000 308 869 292 293 350 350 AATLAQELEK 10 Unmodified _AATLAQELEK_ 0 0 0 Q14683 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 537.296081542969 2 537.295496 1072.57644 0.47024 0.00025266 0.18213 9.7856E-05 0.65237 0.00035051 537.295541720717 31.633 0.39761 31.633 31.421 31.818 0 12 7 2 0 0 0 0.048734 1 23743 35.445 8.1413 1 3263900 309 2100 293 294 351 351 AATLAQELEK 10 Unmodified _AATLAQELEK_ 0 0 0 Q14683 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 537.296264648438 2 537.295496 1072.57644 0.4916 0.00026414 0.55824 0.00029994 1.0498 0.00056408 537.295819892898 32.26 0.74261 32.26 31.967 32.71 0 39 14 3 0 0 0 0.02438 1 24536 43.769 15.595 1 17828000 310 2100 293 294 352 352 AATLAQELEK 10 Unmodified _AATLAQELEK_ 0 0 0 Q14683 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 537.295593261719 2 537.295496 1072.57644 0.64637 0.00034729 0.97648 0.00052466 1.6228 0.00087195 537.295373617355 39.915 0.83466 39.915 39.378 40.213 0 42 16 5 0 0 0 0.00038639 1 35522 91.085 70.518 1 18666000 311 2100 293 294 353 353 AATLILEPAGR 11 Unmodified _AATLILEPAGR_ 0 0 0 Q86TX2 Q86TX2 Q86TX2 ACOT1 Acyl-coenzyme A thioesterase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 556.327392578125 2 556.327131 1110.63971 0.51436 0.00028615 0.19007 0.00010574 0.70443 0.00039189 556.327091662593 52.768 0.54836 52.768 52.543 53.092 0 19 10 2 0 0 0 0.00076668 1 53722 73.233 57.03 1 5384300 312 2572 294 295 354 354 AATLSTLAGQPLLER 15 Unmodified _AATLSTLAGQPLLER_ 0 0 0 CON__Q03247 CON__Q03247 CON__Q03247 MULTI-MSMS 210214_Eclipse_Hela_QC 770.940063476562 2 770.938305 1539.86206 1.4305 0.0011028 0.19674 0.00015168 1.6272 0.0012545 770.938610198122 75.793 0.52756 75.793 75.552 76.079 0 25 10 3 0 0 0 0.00010971 1 86049 80.69 58.157 1 8479700 + 313 74 295 296 355 355 AATSDLEHYDK 11 Unmodified _AATSDLEHYDK_ 0 0 0 P80303 P80303 P80303 NUCB2 Nucleobindin-2;Nesfatin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 625.790161132812 2 625.288399 1248.56225 0.6245 0.00039049 -0.97797 -0.00061151 -0.35347 -0.00022102 625.288493360658 23.208 0.54819 23.208 22.853 23.401 0 28 10 4 0 0 0 0.0011503 1 11625 79.974 66.937 1 10614000 314 1758 296 297 356 356 AATSDLEHYDK 11 Unmodified _AATSDLEHYDK_ 0 0 0 P80303 P80303 P80303 NUCB2 Nucleobindin-2;Nesfatin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 417.195068359375 3 417.194692 1248.56225 0.35067 0.0001463 0.021362 8.9119E-06 0.37203 0.00015521 417.19467598809 23.169 0.3489 23.169 22.952 23.301 0 14 6 3 0 0 0 0.058701 1 11646 22.075 13.562 1 5402000 315 1758 296 297 357 357 AATSPALFNR 10 Unmodified _AATSPALFNR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 210214_Eclipse_Hela_QC 524.282775878906 2 524.282723 1046.55089 0.15798 8.2828E-05 -0.37131 -0.00019467 -0.21333 -0.00011184 524.282397194138 37.171 0.68328 37.171 36.863 37.546 0 31 13 3 0 0 0 0.0010598 1 31820 78.77 59.293 1 22523000 316 2070 297 298 358 358 AAVATFLQSVQVPEFTPK 18 Unmodified _AAVATFLQSVQVPEFTPK_ 0 0 0 P22314 P22314 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 MULTI-MSMS 210214_Eclipse_Hela_QC 967.529235839844 2 967.025108 1932.03566 1.1489 0.001111 -0.33401 -0.00032299 0.81489 0.00078802 967.526196119033 105.17 0.79758 105.17 104.93 105.72 0 60 15 7 0 0 0 4.4675E-145 1 126712 305.11 289.36 1 364640000 317 1009 298 299 359 359 AAVAVVPLVSEDK 13 Unmodified _AAVAVVPLVSEDK_ 0 0 0 O75152 O75152 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A MULTI-MSMS 210214_Eclipse_Hela_QC 649.375793457031 2 649.371735 1296.72892 0.56995 0.00037011 3.1561 0.0020495 3.7261 0.0024196 649.37361796837 63.954 1.1404 63.954 63.374 64.514 0 63 23 4 0 0 0 0.0042467 1 69756 51.092 17.829 1 13975000 318 426 299 300 360 360 AAVAWEAGK 9 Unmodified _AAVAWEAGK_ 0 0 0 P11766 P11766 P11766 ADH5 Alcohol dehydrogenase class-3 MULTI-MSMS 210214_Eclipse_Hela_QC 451.739990234375 2 451.74016 901.465767 0.11549 5.2172E-05 1.9134 0.00086438 2.0289 0.00091655 451.740137948287 27.902 0.63726 27.902 27.601 28.239 0 33 12 4 0 0 0 0.0069873 1 18390 60.118 29.615 1 25701000 319 839 300 301 361 361 AAVDAGFVPNDMQVGQTGK 19 Unmodified _AAVDAGFVPNDMQVGQTGK_ 0 0 0 P13804 P13804 P13804 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 953.463134765625 2 952.962182 1903.90981 1.3705 0.0013061 -0.21417 -0.0002041 1.1564 0.001102 952.962180732968 67.98 0.69576 67.98 67.61 68.306 0 56 13 6 0 0 0 2.9069E-06 1 74859 94.551 80.835 1 79111000 320 867 301 302 362 362 AAVDLEK 7 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAVDLEK_ 1 0 0 P17858 P17858 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type MULTI-SECPEP 210214_Eclipse_Hela_QC 787.34033203125 1 787.41961 786.412334 1.2272 0.00096636 -0.42539 -0.00033496 0.80186 0.0006314 787.419419131458 47.1 0.84551 47.1 46.827 47.672 0 27 16 2 0 0 0 0.021321 1 45684 79.469 30.907 1 14048000 321 942 302 303 363 363 AAVEALQSQALHATSQQPLR 20 Unmodified _AAVEALQSQALHATSQQPLR_ 0 0 0 Q92599 Q92599 Q92599 SEPT8 Septin-8 MULTI-MSMS 210214_Eclipse_Hela_QC 707.38232421875 3 707.046665 2118.11816 0.84256 0.00059573 0.07303 5.1635E-05 0.91559 0.00064737 707.381074442297 56.462 0.59708 56.462 56.218 56.815 0 24 11 4 0 0 0 0.00059385 1 59075 47.397 43.429 1 7599100 322 2890 303 304 364 364 AAVEEGIVLGGGCALLR 17 Unmodified _AAVEEGIVLGGGCALLR_ 0 0 0 P10809 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 842.958862304688 2 842.956172 1683.89779 1.1745 0.00099009 -0.49254 -0.00041519 0.68201 0.00057491 842.956003784405 86.066 1.6899 86.066 85.494 87.184 0 153 33 8 0 0 0 1.2872E-35 2 100030 180.81 131.31 1 410810000 323 813 304 305 365;366 365 AAVEEGIVLGGGCALLR 17 Unmodified _AAVEEGIVLGGGCALLR_ 0 0 0 P10809 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 562.641174316406 3 562.30654 1683.89779 0.66812 0.00037569 -0.64553 -0.00036299 0.022587 1.2701E-05 562.306321300843 86.066 0.44825 86.066 85.842 86.29 0 22 8 3 0 0 0 0.00012946 1 100302 46.926 39.887 1 3197500 324 813 304 305 367 367 AAVEELLER 9 Unmodified _AAVEELLER_ 0 0 0 Q15814 Q15814 Q15814 TBCC Tubulin-specific chaperone C MULTI-MSMS 210214_Eclipse_Hela_QC 515.282958984375 2 515.282389 1028.55022 0.39335 0.00020269 4.3673 0.0022504 4.7607 0.0024531 515.787277396962 54.933 0.49777 54.933 54.675 55.173 0 16 9 2 0 0 0 0.051361 1 56979 36.447 7.7503 1 5822400 325 2216 305 306 368 368 AAVELEEPEDAR 12 Unmodified _AAVELEEPEDAR_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 210214_Eclipse_Hela_QC 664.820190429688 2 664.820064 1327.62557 0.95616 0.00063567 0.36539 0.00024292 1.3216 0.00087859 664.820342959099 39.824 0.29814 39.824 39.567 39.865 0 19 5 5 0 0 0 0.00010384 1 35455 94.409 73.843 1 16847000 326 525 306 307 369 369 AAVENLPTFLVELSR 15 Unmodified _AAVENLPTFLVELSR_ 0 0 0 Q14974 Q14974 Q14974 KPNB1 Importin subunit beta-1 MULTI-MSMS 210214_Eclipse_Hela_QC 830.461975097656 2 829.959237 1657.90392 1.7565 0.0014578 0.32537 0.00027004 2.0819 0.0017279 829.959598073519 106.89 0.49759 106.89 106.71 107.21 0 26 9 5 0 0 0 9.7773E-56 1 129118 218.54 200.68 1 145330000 327 2120 307 308 370 370 AAVESLGFILFR 12 Unmodified _AAVESLGFILFR_ 0 0 0 Q99460 Q99460 Q99460 PSMD1 26S proteasome non-ATPase regulatory subunit 1 MULTI-SECPEP 210214_Eclipse_Hela_QC 662.335205078125 2 661.876988 1321.73942 0.48871 0.00032347 -0.35066 -0.00023209 0.13805 9.1375E-05 661.876654273086 106.15 0.19913 106.15 106.02 106.22 0 8 3 3 0 0 0 0.013091 1 128076 77.677 36.69 1 7911000 328 3160 308 309 371 371 AAVETLGVPCFLGGMAR 17 Unmodified _AAVETLGVPCFLGGMAR_ 0 0 0 A1L0T0 A1L0T0 A1L0T0 ILVBL Acetolactate synthase-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 874.948852539062 2 874.94475 1747.87495 1.3808 0.0012081 0.050393 4.4091E-05 1.4312 0.0012522 874.94518915757 98.879 0.74664 98.879 98.461 99.207 0 59 14 5 0 0 0 0.0058845 1 117816 39.266 25.108 1 15281000 329 9 309 310 372 372 AAVEWFDGK 9 Unmodified _AAVEWFDGK_ 0 0 0 Q01844 Q01844 Q01844 EWSR1 RNA-binding protein EWS MULTI-MSMS 210214_Eclipse_Hela_QC 511.750885009766 2 511.750724 1021.4869 0.40459 0.00020705 0.15515 7.94E-05 0.55975 0.00028645 511.750787739329 54.899 0.84579 54.899 54.526 55.371 0 41 16 3 0 0 0 0.0038691 1 56559 68.224 18.183 1 31947000 330 1822 310 311 373 373 AAVEWFDGK 9 Unmodified _AAVEWFDGK_ 0 0 0 Q01844 Q01844 Q01844 EWSR1 RNA-binding protein EWS MULTI-MSMS 210214_Eclipse_Hela_QC 512.261840820312 2 511.750724 1021.4869 -0.012649 -6.4732E-06 0.24814 0.00012698 0.23549 0.00012051 511.750798840244 68.967 1.4197 68.967 68.505 69.924 0 93 28 5 0 0 0 0.019295 1 77132 49.097 0.81369 1 147030000 331 1822 310 311 374 374 AAVGQESPGGLEAGNAK 17 Unmodified _AAVGQESPGGLEAGNAK_ 0 0 0 Q29RF7 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A MULTI-MSMS 210214_Eclipse_Hela_QC 778.390014648438 2 778.389176 1554.7638 0.76835 0.00059808 -0.61309 -0.00047722 0.15526 0.00012085 778.389369506104 28.349 0.38567 28.349 28.139 28.525 0 18 7 3 0 0 0 0.012455 1 19041 36.284 16.523 1 11398000 332 2265 311 312 375 375 AAVHTYGIASVPNQPLK 17 Unmodified _AAVHTYGIASVPNQPLK_ 0 0 0 Q9UHI6 Q9UHI6 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 MULTI-MSMS 210214_Eclipse_Hela_QC 589.660583496094 3 589.324699 1764.95227 0.74313 0.00043795 0.62051 0.00036568 1.3636 0.00080363 589.659021518746 49.292 0.54797 49.292 48.938 49.486 0 24 10 3 0 0 0 0.035307 2 48823 23.799 18.94 1 7785100 333 3866 312 313 376;377 377 AAVIGDVIR 9 Unmodified _AAVIGDVIR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 457.277008056641 2 457.276909 912.539266 0.39327 0.00017983 -0.26507 -0.00012121 0.1282 5.8623E-05 457.276915731548 48.937 0.84048 48.937 48.596 49.436 0 63 16 5 0 0 0 0.0010588 1 48249 84.498 46.337 1 40090000 334 3612 313 314 378 378 AAVLLEQER 9 Unmodified _AAVLLEQER_ 0 0 0 Q13435 Q13435 Q13435 SF3B2 Splicing factor 3B subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 514.790405273438 2 514.790381 1027.56621 0.20254 0.00010427 -0.92386 -0.0004756 -0.72132 -0.00037133 514.790384217285 33.254 0.64354 33.254 32.932 33.576 0 43 12 5 0 0 0 0.00040226 1 26132 104.44 58.719 1 25776000 335 1987 314 315 379 379 AAVLQQVLER 10 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAVLQQVLER_ 1 0 0 P12270 P12270 P12270 TPR Nucleoprotein TPR MULTI-MSMS 210214_Eclipse_Hela_QC 584.838684082031 2 584.837862 1167.66117 0.45251 0.00026464 -1.3377 -0.00078231 -0.88515 -0.00051767 584.837511564719 108.78 0.39771 108.78 108.61 109 0 19 7 4 0 0 0 2.8529E-08 1 131729 148.52 121.22 1 24854000 336 849 315 316 380 380 AAVMHDILDMMPEGIK 16 Unmodified _AAVMHDILDMMPEGIK_ 0 0 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 210214_Eclipse_Hela_QC 590.959716796875 3 590.957754 1769.85143 1.3355 0.00078925 -0.55589 -0.00032851 0.77965 0.00046074 590.957714435299 92.718 0.69662 92.718 92.444 93.141 0 43 13 4 0 0 0 0.00092219 1 109396 33.547 22.76 1 12537000 337 2450 316 317 381 381 AAVMVYDDANK 11 Unmodified _AAVMVYDDANK_ 0 0 0 Q8N8S7 Q8N8S7 Q8N8S7 ENAH Protein enabled homolog MULTI-MSMS 210214_Eclipse_Hela_QC 598.783996582031 2 598.784438 1195.55432 0.65323 0.00039114 -1.2784 -0.00076549 -0.62517 -0.00037434 598.783649645218 33.528 0.78535 33.528 33.081 33.867 0 28 15 3 0 0 0 0.040413 1 26510 35.612 18.836 1 3777400 338 2711 317 318 382 382 AAVPDAVGK 9 Unmodified _AAVPDAVGK_ 0 0 0 P05023;P13637;P50993 P05023 P05023 ATP1A1;ATP1A3;ATP1A2 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2 MULTI-MSMS 210214_Eclipse_Hela_QC 414.234588623047 2 414.23471 826.454868 -0.068381 -2.8326E-05 -0.047774 -1.979E-05 -0.11615 -4.8115E-05 414.234697220826 22.706 0.39868 22.706 22.454 22.853 0 17 7 3 0 0 0 0.0019287 1 11090 78.77 54.138 1 23096000 339 675 318 319 383 383 AAVPELLQQQEEDR 14 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AAVPELLQQQEEDR_ 1 0 0 Q9Y5X3 Q9Y5X3 Q9Y5X3 SNX5 Sorting nexin-5 MULTI-MSMS 210214_Eclipse_Hela_QC 834.416076660156 2 834.415391 1666.81623 1.5166 0.0012655 -0.073908 -6.167E-05 1.4427 0.0012038 834.415100202794 95 0.79057 95 94.532 95.323 0 34 15 3 0 0 0 7.92E-05 1 112552 93.258 84.303 1 6457900 340 4128 319 320 384 384 AAVPSGASTGIYEALELR 18 Unmodified _AAVPSGASTGIYEALELR_ 0 0 0 P06733;P13929;P09104 P06733;P13929;P09104 P06733 ENO1;ENO3;ENO2 Alpha-enolase;Beta-enolase;Gamma-enolase MULTI-MSMS 210214_Eclipse_Hela_QC 902.821105957031 2 902.975615 1803.93668 1.1296 0.00102 -1.4912 -0.0013465 -0.36157 -0.00032649 902.974240246949 88.905 1.9355 88.905 88.37 90.306 0 195 38 9 0 0 0 1.6308E-18 3 103792 147.26 133.33 1 1944900000 341 703;870;767 320 321 385;386;387 385 AAVPSGASTGIYEALELR 18 Unmodified _AAVPSGASTGIYEALELR_ 0 0 0 P06733;P13929;P09104 P06733;P13929;P09104 P06733 ENO1;ENO3;ENO2 Alpha-enolase;Beta-enolase;Gamma-enolase MULTI-MSMS 210214_Eclipse_Hela_QC 602.320434570312 3 602.319502 1803.93668 0.76183 0.00045887 -0.31788 -0.00019146 0.44396 0.0002674 602.319354441379 88.909 0.69666 88.909 88.516 89.213 0 36 13 4 0 0 0 0.00018236 1 104122 39.849 20.01 1 8070100 342 703;870;767 320 321 388 388 AAVQELSSSILAGEDPEER 19 Unmodified _AAVQELSSSILAGEDPEER_ 0 0 0 P49768 P49768 P49768 PSEN1 Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12 MULTI-MSMS 210214_Eclipse_Hela_QC 1001.49548339844 2 1000.99219 1999.96983 1.1587 0.0011599 -0.56449 -0.00056505 0.59423 0.00059482 1001.49330643543 78.525 0.44746 78.525 78.269 78.717 0 19 8 3 0 0 0 6.809E-05 1 89799 68.809 47.252 1 5432100 343 1393 321 322 389 389 AAVSALLEQHGLQGDVAFGHSK 22 Unmodified _AAVSALLEQHGLQGDVAFGHSK_ 0 0 0 B0I1T2 B0I1T2 B0I1T2 MYO1G Unconventional myosin-Ig;Minor histocompatibility antigen HA-2 MULTI-MSMS 210214_Eclipse_Hela_QC 559.794555664062 4 559.543371 2234.14438 0.39976 0.00022368 -0.21766 -0.00012179 0.1821 0.00010189 559.794017801461 65.145 0.64782 65.145 64.755 65.403 0 31 12 4 0 0 0 0.020913 1 71012 18.881 15.642 1 9262700 344 27 322 323 390 390 AAVSALLEQHGLQGDVAFGHSK 22 Unmodified _AAVSALLEQHGLQGDVAFGHSK_ 0 0 0 B0I1T2 B0I1T2 B0I1T2 MYO1G Unconventional myosin-Ig;Minor histocompatibility antigen HA-2 MULTI-MSMS 210214_Eclipse_Hela_QC 746.056030273438 3 745.72207 2234.14438 0.95922 0.00071531 0.83438 0.00062222 1.7936 0.0013375 746.391668443674 65.144 0.64778 65.144 64.805 65.453 0 35 12 4 0 0 0 0.046453 1 71017 18.245 14.584 1 4768700 345 27 322 323 391 391 AAVTSLFAK 9 Unmodified _AAVTSLFAK_ 0 0 0 CON__Q3SX09 CON__Q3SX09 CON__Q3SX09 MULTI-MSMS 210214_Eclipse_Hela_QC 454.266357421875 2 454.26601 906.517468 0.45035 0.00020458 0.1194 5.4238E-05 0.56974 0.00025882 454.266013771137 49.647 1.6889 49.647 49.237 50.926 0 93 33 5 0 0 0 4.184E-07 2 49795 150.17 92.702 1 248350000 + 346 97 323 324 392;393 393 AAVTSLFAK 9 Unmodified _AAVTSLFAK_ 0 0 0 CON__Q3SX09 CON__Q3SX09 CON__Q3SX09 MULTI-SECPEP 210214_Eclipse_Hela_QC 907.984680175781 1 907.524744 906.517468 1.3462 0.0012217 0.19294 0.0001751 1.5392 0.0013968 907.524887593954 49.625 0.69337 49.625 49.337 50.03 0 35 13 3 0 0 0 0.0015576 1 49673 133.12 35.318 1 27869000 + 347 97 323 324 394 394 AAVVPLGTWR 10 Unmodified _AAVVPLGTWR_ 0 0 0 Q15125 Q15125 Q15125 EBP 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase MULTI-MSMS 210214_Eclipse_Hela_QC 535.31201171875 2 535.311284 1068.60801 0.30569 0.00016364 0.348 0.00018629 0.65369 0.00034993 535.311390177501 64.573 0.63481 64.573 64.27 64.905 0 40 13 4 0 0 0 0.00013383 1 70101 105.57 99.909 1 25603000 348 2156 324 325 395 395 AAVWEITGAEFSK 13 Unmodified _AAVWEITGAEFSK_ 0 0 0 P49916 P49916 P49916 LIG3 DNA ligase 3 MULTI-MSMS 210214_Eclipse_Hela_QC 704.859741210938 2 704.858992 1407.70343 1.0576 0.00074549 -0.15498 -0.00010924 0.90266 0.00063625 704.858855663155 79.672 0.79673 79.672 79.363 80.16 0 21 13 2 0 0 0 0.0003554 1 91299 69.01 60.147 1 3880700 349 1405 325 326 396 396 AAVYNHFISDGVK 13 Unmodified _AAVYNHFISDGVK_ 0 0 0 CON__Q2UVX4 CON__Q2UVX4 CON__Q2UVX4 MULTI-MSMS 210214_Eclipse_Hela_QC 474.24560546875 3 474.245498 1419.71466 0.054933 2.6052E-05 0.0030554 1.449E-06 0.057989 2.7501E-05 474.245533196658 42.338 0.94299 42.338 42.002 42.945 0 60 18 5 0 0 0 5.0275E-05 2 38763 79.089 66.167 1 56606000 + 350 92 326 327 397;398 397 AAWEAYLSR 9 Unmodified _AAWEAYLSR_ 0 0 0 P11172 P11172 P11172 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase MULTI-MSMS 210214_Eclipse_Hela_QC 533.769165039062 2 533.769448 1065.52434 0.11551 6.1658E-05 0.30897 0.00016492 0.42448 0.00022658 533.769595771217 64.258 0.54315 64.258 63.971 64.514 0 16 11 2 0 0 0 0.0023397 1 69888 76.064 56.278 1 6541300 351 822 327 328 399 399 AAWGEETDYTPVWCMR 16 Unmodified _AAWGEETDYTPVWCMR_ 0 0 0 P06132 P06132 P06132 UROD Uroporphyrinogen decarboxylase MULTI-MSMS 210214_Eclipse_Hela_QC 986.426147460938 2 986.421836 1970.82912 1.1792 0.0011632 -0.065957 -6.5061E-05 1.1133 0.0010981 986.923065990485 90.108 0.5462 90.108 89.859 90.405 0 20 10 2 0 0 0 4.4209E-06 1 105842 100.72 92.209 1 4903000 352 694 328 329 400 400 AAYAGGLVLDPK 12 Unmodified _AAYAGGLVLDPK_ 0 0 0 P09884 P09884 P09884 POLA1 DNA polymerase alpha catalytic subunit MULTI-MSMS 210214_Eclipse_Hela_QC 587.82666015625 2 587.826963 1173.63937 0.88585 0.00052073 -0.60899 -0.00035798 0.27686 0.00016274 587.826553909483 57.287 0.49796 57.287 57.064 57.562 0 21 9 3 0 0 0 0.0082838 1 60192 48.981 37.621 1 6664300 353 785 329 330 401 401 AAYDIEVNTR 10 Unmodified _AAYDIEVNTR_ 0 0 0 O75955 O75955 O75955 FLOT1 Flotillin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 576.288452148438 2 576.288202 1150.56185 0.62125 0.00035802 1.5009 0.00086493 2.1221 0.0012229 576.289329290031 42.151 1.091 42.151 41.854 42.945 0 35 21 2 0 0 0 0.00030069 1 38691 95.358 74.411 1 16215000 354 502 330 331 402 402 AAYEAELGDAR 11 Unmodified _AAYEAELGDAR_ 0 0 0 P02545 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 210214_Eclipse_Hela_QC 583.278198242188 2 583.277835 1164.54112 0.37321 0.00021769 0.51192 0.00029859 0.88513 0.00051628 583.277733148604 35.171 1.6615 35.171 34.661 36.322 0 109 33 6 0 0 0 1.2563E-10 1 28521 137.95 106.66 1 253610000 355 640 331 332 403 403 AAYEAELGDARK 12 Unmodified _AAYEAELGDARK_ 0 0 1 P02545 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 210214_Eclipse_Hela_QC 647.325317382812 2 647.325316 1292.63608 0.031767 2.0563E-05 0.60739 0.00039318 0.63916 0.00041374 647.827430946207 25.02 0.29868 25.02 24.865 25.164 0 9 5 2 0 0 0 0.00092401 1 14312 78.655 55.915 1 4406400 356 640 332 333 404 404 AAYFGIYDTAK 11 Unmodified _AAYFGIYDTAK_ 0 0 0 P05141 P05141 P05141 SLC25A5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 610.303405761719 2 610.303321 1218.59209 0.064552 3.9396E-05 0.28169 0.00017192 0.34624 0.00021131 610.303317625409 61.8 0.99112 61.8 61.293 62.284 0 62 19 5 0 0 0 0.0022869 1 66216 62.869 49.832 1 78267000 357 679 333 334 405 405 AAYFGVYDTAK 11 Unmodified _AAYFGVYDTAK_ 0 0 0 P12235;P12236 P12235;P12236 P12235 SLC25A4;SLC25A6 ADP/ATP translocase 1;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 603.295776367188 2 603.295496 1204.57644 1.1132 0.0006716 0.00014373 8.6713E-08 1.1134 0.00067168 603.295374864773 54.214 0.93513 54.214 53.839 54.774 0 50 18 4 0 0 0 0.0091571 1 55591 50.292 39.6 1 37914000 358 846;847 334 335 406 406 AAYIYIR 7 Unmodified _AAYIYIR_ 0 0 0 P49821 P49821 P49821 NDUFV1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial MSMS 210214_Eclipse_Hela_QC 435.247467041016 2 435.247621 868.480688 NaN NaN NaN NaN NaN NaN NaN 43.752 1 43.752 43.252 44.252 0 0 0 0 0.023835 1 40999 75.131 48.011 1 359 1398 335 336 407 407 AAYLNMSEDPSHPSMALNTR 20 Unmodified _AAYLNMSEDPSHPSMALNTR_ 0 0 0 Q14839 Q14839 Q14839 CHD4 Chromodomain-helicase-DNA-binding protein 4 MULTI-MSMS 210214_Eclipse_Hela_QC 736.008178710938 3 735.673622 2203.99904 0.5333 0.00039233 0.19677 0.00014476 0.73007 0.00053709 736.008009054829 61.741 0.54744 61.741 61.442 61.989 0 19 10 2 0 0 0 0.0028131 1 66486 36.687 33.635 1 17920000 360 2115 336 337 408 408 AAYLQETGKPLDETLK 16 Unmodified _AAYLQETGKPLDETLK_ 0 0 1 P04083 P04083 P04083 ANXA1 Annexin A1 MULTI-MSMS 210214_Eclipse_Hela_QC 592.985412597656 3 592.98412 1775.93053 1.1631 0.00068967 -0.2176 -0.00012903 0.94546 0.00056064 592.984019619214 50.454 1.5161 50.454 49.683 51.199 0 98 30 7 0 0 0 0.00046671 1 50158 64.52 52.599 1 283930000 361 657 337 338 409 409 AAYLQETGKPLDETLK 16 Unmodified _AAYLQETGKPLDETLK_ 0 0 1 P04083 P04083 P04083 ANXA1 Annexin A1 MULTI-MSMS 210214_Eclipse_Hela_QC 888.974975585938 2 888.972541 1775.93053 1.7571 0.001562 -0.20395 -0.00018131 1.5532 0.0013807 888.972327590358 50.416 0.59779 50.416 50.13 50.727 0 42 11 5 0 0 0 0.0036141 1 50248 90.614 72.346 1 20791000 362 657 337 338 410 410 AAYLSDPR 8 Unmodified _AAYLSDPR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 210214_Eclipse_Hela_QC 446.729797363281 2 446.729792 891.445031 -0.11675 -5.2155E-05 3.2203 0.0014386 3.1035 0.0013864 446.72983311754 26.543 0.59769 26.543 26.258 26.856 0 43 11 6 0 0 0 0.0081259 1 16535 69.998 36.641 1 38657000 363 1752 338 339 411 411 AAYNPGQAVPWNAVK 15 Unmodified _AAYNPGQAVPWNAVK_ 0 0 0 Q8N163 Q8N163 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 793.410278320312 2 793.409714 1584.80488 1.7345 0.0013762 -0.024256 -1.9245E-05 1.7103 0.0013569 793.409500450175 65.426 0.54797 65.426 65.104 65.652 0 31 10 4 0 0 0 8.1915E-05 1 71473 83.869 66.433 1 15511000 364 2667 339 340 412 412 AAYNVTLLNFMDPQK 15 Unmodified _AAYNVTLLNFMDPQK_ 0 0 0 Q9C0B1 Q9C0B1 Q9C0B1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO MULTI-SECPEP 210214_Eclipse_Hela_QC 862.740661621094 2 862.937447 1723.86034 1.6393 0.0014147 2.3026 0.001987 3.942 0.0034017 862.940448871295 102.95 0.69552 102.95 102.64 103.33 0 37 13 4 0 0 0 0.0091158 1 123719 66.262 47.995 1 4385100 365 3380 340 341 413 413 AAYPDLENPPLLVTPSQQAK 20 Unmodified _AAYPDLENPPLLVTPSQQAK_ 0 0 0 P54136 P54136 P54136 RARS Arginine--tRNA ligase, cytoplasmic MULTI-MSMS 210214_Eclipse_Hela_QC 1077.07116699219 2 1076.56787 2151.12118 0.76273 0.00082113 0.59051 0.00063573 1.3532 0.0014569 1077.0698059084 87.225 0.94382 87.225 86.837 87.781 0 60 18 4 0 0 0 0.0080024 1 101678 45.863 40.686 1 38574000 366 1513 341 342 414 414 AAYQVAALPK 10 Unmodified _AAYQVAALPK_ 0 0 0 P52758 P52758 P52758 HRSP12 Ribonuclease UK114 MULTI-MSMS 210214_Eclipse_Hela_QC 516.298156738281 2 516.297842 1030.58113 0.38309 0.00019779 0.45546 0.00023516 0.83855 0.00043294 516.297917882751 43.025 1.0459 43.025 42.547 43.593 0 50 20 3 0 0 0 0.0011969 1 39832 77.072 56.373 1 15140000 367 1481 342 343 415 415 AAYSNFWCGMTSQGYYK 17 Unmodified _AAYSNFWCGMTSQGYYK_ 0 0 0 Q8NBJ5 Q8NBJ5 Q8NBJ5 COLGALT1 Procollagen galactosyltransferase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1017.42919921875 2 1017.42966 2032.84477 1.2693 0.0012914 -0.33425 -0.00034007 0.93507 0.00095136 1017.42950879988 82.64 0.8605 82.64 82.395 83.256 0 53 18 4 0 0 0 0.0036163 1 95385 45.257 45.257 1 12139000 368 2727 343 344 416 416 AAYVLFYQR 9 Unmodified _AAYVLFYQR_ 0 0 0 Q9Y4E8;Q13107;P51784 Q9Y4E8;P51784 Q9Y4E8 USP15;USP4;USP11 Ubiquitin carboxyl-terminal hydrolase 15;Ubiquitin carboxyl-terminal hydrolase 4;Ubiquitin carboxyl-terminal hydrolase 11 MULTI-MSMS 210214_Eclipse_Hela_QC 565.803405761719 2 565.803291 1129.59203 0.60768 0.00034383 -1.8636 -0.0010544 -1.2559 -0.00071059 565.801532150081 64.96 0.94659 64.96 64.556 65.503 0 25 18 2 0 0 0 0.041913 1 70819 38.792 17.492 1 1798200 369 4087;1453 344 345 417 417 AAYWEEEPAEVR 12 Unmodified _AAYWEEEPAEVR_ 0 0 0 Q9Y6Y8 Q9Y6Y8 Q9Y6Y8 SEC23IP SEC23-interacting protein MULTI-MSMS 210214_Eclipse_Hela_QC 725.336608886719 2 725.335881 1448.65721 1.2516 0.00090785 1.2593 0.00091341 2.5109 0.0018213 725.837494138442 54.477 0.88537 54.477 54.238 55.123 0 23 17 2 0 0 0 0.013411 1 56154 44.863 37.218 1 5363500 370 4169 345 346 418 418 ACADAGLLDESFLR 14 Unmodified _ACADAGLLDESFLR_ 0 0 0 O95155 O95155 O95155 UBE4B Ubiquitin conjugation factor E4 B MULTI-MSMS 210214_Eclipse_Hela_QC 769.370666503906 2 769.369398 1536.72424 0.86408 0.0006648 0.076686 5.9E-05 0.94077 0.0007238 769.369739356368 86.646 0.54684 86.646 86.339 86.886 0 26 10 3 0 0 0 7.1189E-05 1 100997 88.441 81.588 1 4441000 371 536 346 347 419 419 ACADATLSQITNNIDPVGR 19 Unmodified _ACADATLSQITNNIDPVGR_ 0 0 0 P62873 P62873 P62873 GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 MULTI-MSMS 210214_Eclipse_Hela_QC 1009.50018310547 2 1008.49438 2014.9742 1.5173 0.0015302 -0.36166 -0.00036473 1.1556 0.0011655 1008.49397780269 84.823 1.0443 84.823 84.5 85.544 0 60 20 5 0 0 0 3.2597E-06 1 98442 93.649 78.447 1 62684000 372 1687 347 348 420 420 ACALSIEESCRPGDK 15 Unmodified _ACALSIEESCRPGDK_ 0 0 1 P31040 P31040 P31040 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 564.927490234375 3 564.927511 1691.7607 0.29717 0.00016788 -0.40004 -0.000226 -0.10287 -5.8116E-05 564.927490079036 30.949 0.84692 30.949 30.623 31.47 0 52 16 5 0 0 0 6.6068E-05 1 22606 89.648 86.33 1 44103000 373 1138 348 349 421 421 ACALSIEESCRPGDK 15 Unmodified _ACALSIEESCRPGDK_ 0 0 1 P31040 P31040 P31040 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 846.889221191406 2 846.887629 1691.7607 0.72606 0.00061489 -0.0034568 -2.9275E-06 0.72261 0.00061197 846.887808337728 30.954 0.54824 30.954 30.673 31.222 0 29 10 4 0 0 0 0.0079206 1 22696 66.262 60.03 1 8666200 374 1138 348 349 422 422 ACALSQINTK 10 Unmodified _ACALSQINTK_ 0 0 0 O95825 O95825 O95825 CRYZL1 Quinone oxidoreductase-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 553.286682128906 2 553.287148 1104.55974 -0.33595 -0.00018588 0.6637 0.00036722 0.32775 0.00018134 553.287499992488 27.279 0.2981 27.279 27.105 27.403 0 10 5 3 0 0 0 0.018078 1 17593 47.198 14.305 1 3663800 375 600 349 350 423 423 ACANPAAGSVILLENLR 17 Unmodified _ACANPAAGSVILLENLR_ 0 0 0 P00558 P00558 P00558 PGK1 Phosphoglycerate kinase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 884.973388671875 2 884.972353 1767.93015 1.8172 0.0016082 -1.3434 -0.0011889 0.47381 0.0004193 884.971685909019 92.718 1.3924 92.718 92.295 93.687 0 129 27 7 0 0 0 3.1314E-78 3 109929 231.66 213.85 1 1070900000 376 630 350 351 424;425;426 425 ACANPAAGSVILLENLR 17 Unmodified _ACANPAAGSVILLENLR_ 0 0 0 P00558 P00558 P00558 PGK1 Phosphoglycerate kinase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 590.319396972656 3 590.317327 1767.93015 1.3219 0.00078032 0.39675 0.00023421 1.7186 0.0010145 590.31780063104 92.689 0.94528 92.689 92.295 93.24 0 53 18 5 0 0 0 0.00021544 1 109394 50.077 38.162 1 6497000 377 630 350 351 427 427 ACDLPAWVHFPDTER 15 Unmodified _ACDLPAWVHFPDTER_ 0 0 0 A0FGR8 A0FGR8 A0FGR8 ESYT2 Extended synaptotagmin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 605.283874511719 3 605.282394 1812.82535 1.0617 0.00064261 -0.014215 -8.6039E-06 1.0475 0.00063401 605.616749886922 81.261 0.94453 81.261 80.805 81.749 0 62 18 5 0 0 0 6.69E-05 1 93361 72.417 68.813 1 9019400 378 6 351 352 428 428 ACDSVTSNVLPLLLEQFHK 19 Unmodified _ACDSVTSNVLPLLLEQFHK_ 0 0 0 Q96T76 Q96T76 Q96T76 MMS19 MMS19 nucleotide excision repair protein homolog MULTI-MSMS 210214_Eclipse_Hela_QC 724.376892089844 3 724.377023 2170.10924 0.57151 0.00041399 0.11001 7.9692E-05 0.68152 0.00049368 724.377034664151 106.2 0.29855 106.2 106.07 106.37 0 14 5 4 0 0 0 1.7371E-05 1 128244 74.793 70.606 1 24733000 379 3149 352 353 429 429 ACEFAGFQCQIQFGPHNEQK 20 Unmodified _ACEFAGFQCQIQFGPHNEQK_ 0 0 0 Q9Y490 Q9Y490 Q9Y490 TLN1 Talin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 800.025451660156 3 799.356405 2395.04738 1.5531 0.0012415 -0.21804 -0.00017429 1.3351 0.0010672 799.690609324515 67.738 0.69562 67.738 67.461 68.157 0 52 13 5 0 0 0 0.0005407 1 74623 48.112 45.059 1 22950000 380 4084 353 354 430 430 ACELWEQILQDHPTDMLALK 20 Unmodified _ACELWEQILQDHPTDMLALK_ 0 0 0 Q5R3I4 Q5R3I4 Q5R3I4 TTC38 Tetratricopeptide repeat protein 38 MULTI-MSMS 210214_Eclipse_Hela_QC 804.925598144531 3 804.395977 2410.1661 0.8606 0.00069227 0.61596 0.00049548 1.4766 0.0011877 804.730885056892 106.1 0.24891 106.1 105.97 106.22 0 14 4 4 0 0 0 0.025045 2 128081 18.353 15.387 1 20265000 381 2337 354 355 431;432 431 ACEPGVDYVYK 11 Unmodified _ACEPGVDYVYK_ 0 0 0 CON__Q2UVX4;P01024 CON__Q2UVX4;P01024 CON__Q2UVX4 C3 Complement C3;Complement C3 beta chain;C3-beta-c;Complement C3 alpha chain;C3a anaphylatoxin;Acylation stimulating protein;Complement C3b alpha chain;Complement C3c alpha chain fragment 1;Complement C3dg fragment;Complement C3g fragment;Complement C3d fragment;Complement C3f fragment;Complement C3c alpha chain fragment 2 MULTI-MSMS 210214_Eclipse_Hela_QC 650.797790527344 2 650.797546 1299.58054 0.30995 0.00020171 0.11289 7.3467E-05 0.42283 0.00027518 650.797539559562 45.707 0.79647 45.707 45.334 46.13 0 30 15 2 0 0 0 0.00013434 1 43701 96.331 81.123 1 92435000 + 382 92;634 355 356 433 433 ACFAELR 7 Unmodified _ACFAELR_ 0 0 0 Q9Y6K5 Q9Y6K5 Q9Y6K5 OAS3 2-5-oligoadenylate synthase 3 MULTI-MSMS 210214_Eclipse_Hela_QC 433.713745117188 2 433.713088 865.411622 0.23407 0.00010152 -0.43121 -0.00018702 -0.19714 -8.5501E-05 433.713014600004 34.259 0.61462 34.259 33.966 34.581 0 27 12 4 0 0 0 0.017765 1 27379 66.993 34.88 1 6091700 383 4158 356 357 434 434 ACFQVGTSEEMK 12 Unmodified _ACFQVGTSEEMK_ 0 0 0 P35658 P35658 P35658 NUP214 Nuclear pore complex protein Nup214 MULTI-MSMS 210214_Eclipse_Hela_QC 693.805725097656 2 693.805045 1385.59554 0.57235 0.0003971 -0.69806 -0.00048432 -0.12572 -8.7223E-05 693.804675861514 40.695 0.6964 40.695 40.462 41.158 0 34 13 4 0 0 0 0.0009167 2 36656 66.19 51.523 1 15736000 384 1196 357 358 435;436 435 ACFSANGEEVLATSTHSK 18 Unmodified _ACFSANGEEVLATSTHSK_ 0 0 0 Q9Y5J1 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 636.964294433594 3 636.96339 1907.86834 0.63748 0.00040605 0.2148 0.00013682 0.85228 0.00054287 637.297788259677 43.419 0.69695 43.419 43.145 43.842 0 38 13 4 0 0 0 0.00010724 1 40483 63.337 63.337 1 9628500 385 4112 358 359 437 437 ACFTMDPK 8 Unmodified _ACFTMDPK_ 0 0 0 P26640 P26640 P26640 VARS Valine--tRNA ligase MULTI-MSMS 210214_Eclipse_Hela_QC 485.211883544922 2 485.212063 968.409574 0.42599 0.0002067 -0.28548 -0.00013852 0.14052 6.818E-05 485.212004190447 31.749 0.59589 31.749 31.421 32.017 0 26 11 4 0 0 0 0.017596 1 23850 55.676 46.088 1 11875000 386 1064 359 360 438 438 ACFYNLDK 8 Unmodified _ACFYNLDK_ 0 0 0 Q96I25 Q96I25 Q96I25 RBM17 Splicing factor 45 MULTI-MSMS 210214_Eclipse_Hela_QC 516.236145019531 2 515.73676 1029.45897 0.31879 0.00016441 -3.3587 -0.0017322 -3.0399 -0.0015678 516.235156211156 42.196 0.79247 42.196 41.755 42.547 0 26 15 2 0 0 0 0.043166 1 38698 44.349 27.809 1 8586900 387 3061 360 361 439 439 ACGADSYEMEEDGVR 15 Unmodified _ACGADSYEMEEDGVR_ 0 0 0 P00533 P00533 P00533 EGFR Epidermal growth factor receptor MULTI-MSMS 210214_Eclipse_Hela_QC 844.831176757812 2 844.829976 1687.6454 0.83278 0.00070355 0.20847 0.00017612 1.0412 0.00087968 844.830548325956 40.155 0.39759 40.155 39.915 40.313 0 17 7 3 0 0 0 0.00031407 1 35902 67.153 61.43 1 3881400 388 629 361 362 440 440 ACGDSTLTQITAGLDPVGR 19 Unmodified _ACGDSTLTQITAGLDPVGR_ 0 0 0 P62879 P62879 P62879 GNB2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 MULTI-MSMS 210214_Eclipse_Hela_QC 966.479248046875 2 966.478196 1930.94184 1.2298 0.0011885 -0.25071 -0.0002423 0.97905 0.00094623 966.979522780116 90.478 0.74574 90.478 90.107 90.853 0 54 14 5 0 0 0 4.5025E-47 2 106278 247.14 238.18 1 56168000 389 1690 362 363 441;442 442 ACGLNFADLMAR 12 Unmodified _ACGLNFADLMAR_ 0 0 0 Q99536 Q99536 Q99536 VAT1 Synaptic vesicle membrane protein VAT-1 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 669.819030761719 2 669.818289 1337.62203 0.99105 0.00066383 -0.22691 -0.00015199 0.76414 0.00051184 669.818104555031 86.829 0.69553 86.829 86.489 87.184 0 35 13 3 0 0 0 8.137E-06 3 101195 111.61 88.178 1 17225000 390 3165 363 364 443;444;445 444 ACGLVASNLNLK 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ACGLVASNLNLK_ 1 0 0 P09382 P09382 P09382 LGALS1 Galectin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 651.349426269531 2 651.347737 1300.68092 0.88447 0.0005761 0.85292 0.00055555 1.7374 0.0011316 651.348567016791 88.581 1.2331 88.581 88.03 89.263 0 68 24 5 0 0 0 1.3492E-24 1 103601 196.88 179.06 1 92785000 391 771 364 365 446 446 ACGLVASNLNLKPGECLR 18 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ACGLVASNLNLKPGECLR_ 1 0 1 P09382 P09382 P09382 LGALS1 Galectin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 1007.51470947266 2 1007.51406 2013.01356 0.97644 0.00098378 0.096837 9.7565E-05 1.0733 0.0010813 1007.51390143601 84.093 0.89635 84.093 83.554 84.45 0 62 17 6 0 0 0 1.973E-35 1 97344 172.92 153.79 1 42762000 392 771 365 366 447 447 ACGNFGIPCELR 12 Unmodified _ACGNFGIPCELR_ 0 0 0 P22234 P22234 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase MULTI-MSMS 210214_Eclipse_Hela_QC 697.321411132812 2 697.321196 1392.62784 0.95814 0.00066813 -0.55355 -0.000386 0.40459 0.00028213 697.321150257639 63.598 0.69688 63.598 63.274 63.971 0 54 13 5 0 0 0 6.3417E-05 1 68777 98.044 89.04 1 73507000 393 1007 366 367 448 448 ACGVSRPVIACSVTIK 16 Unmodified _ACGVSRPVIACSVTIK_ 0 0 1 P55769 P55769 P55769 NHP2L1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 573.307250976562 3 573.307775 1716.9015 0.6788 0.00038916 -1.8435 -0.0010569 -1.1647 -0.00066771 573.305954039803 44.389 1.691 44.389 43.494 45.185 0 69 33 5 0 0 0 0.00061485 1 42002 60.307 48.022 1 34057000 394 1543 367 368 449 449 ACIDSNEDGDLSK 13 Unmodified _ACIDSNEDGDLSK_ 0 0 0 P29144 P29144 P29144 TPP2 Tripeptidyl-peptidase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 712.304260253906 2 712.30392 1422.59329 0.36656 0.00026111 0.361 0.00025714 0.72757 0.00051825 712.304308942621 26.433 0.34866 26.433 26.208 26.557 0 16 6 3 0 0 0 4.1932E-13 2 16275 141.95 137.34 1 12077000 395 1097 368 369 450;451 451 ACIGDTLCQK 10 Unmodified _ACIGDTLCQK_ 0 0 0 A0AVT1 A0AVT1 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 MULTI-MSMS 210214_Eclipse_Hela_QC 583.271118164062 2 583.270641 1164.52673 0.77247 0.00045056 -0.47799 -0.0002788 0.29448 0.00017176 583.270991434046 29.951 0.54729 29.951 29.678 30.225 0 19 10 3 0 0 0 0.0014205 1 21240 74.301 58.92 1 6379000 396 5 369 370 452 452 ACIPVGLLGK 10 Unmodified _ACIPVGLLGK_ 0 0 0 Q96GQ7 Q96GQ7 Q96GQ7 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 210214_Eclipse_Hela_QC 514.302673339844 2 514.30207 1026.58959 0.54066 0.00027806 -0.43485 -0.00022364 0.10582 5.4421E-05 514.301962024711 66.626 0.64708 66.626 66.299 66.946 0 31 12 3 0 0 0 0.035485 1 73087 37.727 25.959 1 12937000 397 3047 370 371 453 453 ACISIGNQNFEVK 13 Unmodified _ACISIGNQNFEVK_ 0 0 0 P52564 P52564 P52564 MAP2K6 Dual specificity mitogen-activated protein kinase kinase 6 MULTI-MSMS 210214_Eclipse_Hela_QC 740.367614746094 2 740.366658 1478.71876 0.88121 0.00065242 0.36227 0.00026821 1.2435 0.00092063 740.366916576245 63.978 0.49795 63.978 63.672 64.17 0 20 9 3 0 0 0 0.0001543 1 69409 83.869 66.004 1 6422600 398 1471 371 372 454 454 ACLDTAVENMPSLK 14 Unmodified _ACLDTAVENMPSLK_ 0 0 0 P49327 P49327 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 210214_Eclipse_Hela_QC 774.875549316406 2 774.873459 1547.73236 1.6077 0.0012458 0.29866 0.00023142 1.9064 0.0014772 774.874022772666 69.299 0.59474 69.299 68.981 69.576 0 34 11 5 0 0 0 2.1295E-06 1 76787 103.91 89.243 1 19778000 399 1365 372 373 455 455 ACLENLGLK 9 Unmodified _ACLENLGLK_ 0 0 0 P36952 P36952 P36952 SERPINB5 Serpin B5 MULTI-MSMS 210214_Eclipse_Hela_QC 509.782958984375 2 509.273509 1016.53247 0.35943 0.00018305 0.054887 2.7953E-05 0.41432 0.000211 509.273545003269 48.662 1.4658 48.662 47.971 49.436 0 60 29 3 0 0 0 0.00016369 2 47786 113.89 83.385 1 92738000 400 1214 373 374 456;457 457 ACLISLGYDIGNDPQGEAEFAR 22 Unmodified _ACLISLGYDIGNDPQGEAEFAR_ 0 0 0 P12814 P12814 P12814 ACTN1 Alpha-actinin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 1199.06469726562 2 1198.56299 2395.11142 1.7935 0.0021497 -0.094443 -0.0001132 1.6991 0.0020365 1199.06448521164 97.433 0.6965 97.433 97.069 97.765 0 52 13 6 0 0 0 1.3104E-07 1 115867 93.823 93.823 1 14237000 401 853 374 375 458 458 ACLISLGYDVENDR 14 Unmodified _ACLISLGYDVENDR_ 0 0 0 O43707 O43707 O43707 ACTN4 Alpha-actinin-4 MULTI-MSMS 210214_Eclipse_Hela_QC 813.387756347656 2 812.885412 1623.75627 1.1081 0.00090075 0.024518 1.9931E-05 1.1326 0.00092068 812.885656367826 78.791 1.1939 78.791 78.12 79.314 0 51 23 3 0 0 0 1.4586E-06 1 90067 108.37 100.99 1 49773000 402 329 375 376 459 459 ACLISLGYDVENDRQGEAEFNR 22 Unmodified _ACLISLGYDVENDRQGEAEFNR_ 0 0 1 O43707 O43707 O43707 ACTN4 Alpha-actinin-4 MULTI-MSMS 210214_Eclipse_Hela_QC 852.730529785156 3 852.730965 2555.17106 1.2294 0.0010484 0.4015 0.00034237 1.6309 0.0013908 853.065440744156 76.134 0.49796 76.134 75.88 76.378 0 23 9 3 0 0 0 0.00017091 1 86376 57.009 43.278 1 12385000 403 329 376 377 460 460 ACLNFLK 7 Unmodified _ACLNFLK_ 0 0 0 Q8WUA2 Q8WUA2 Q8WUA2 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 MULTI-MSMS 210214_Eclipse_Hela_QC 433.233825683594 2 433.233656 864.452759 0.7153 0.00030989 0.17898 7.754E-05 0.89428 0.00038743 433.233679134345 50.182 0.39883 50.182 49.981 50.38 0 12 7 2 0 0 0 0.047476 1 50205 48.761 23.678 1 1929800 404 2822 377 378 461 461 ACLVTTVTSSGPSQSTIK 18 Unmodified _ACLVTTVTSSGPSQSTIK_ 0 0 0 Q9BZH6 Q9BZH6 Q9BZH6 WDR11 WD repeat-containing protein 11 MULTI-MSMS 210214_Eclipse_Hela_QC 919.475708007812 2 918.972216 1835.92988 1.2724 0.0011693 0.014287 1.3129E-05 1.2867 0.0011824 919.473503834598 52.729 0.34897 52.729 52.543 52.892 0 14 6 3 0 0 0 0.00031682 2 53782 58.674 51.786 1 6203700 405 3370 378 379 462;463 463 ACMLTTATAHDGDVNVISWSR 21 Unmodified _ACMLTTATAHDGDVNVISWSR_ 0 0 0 Q9BQ67 Q9BQ67 Q9BQ67 GRWD1 Glutamate-rich WD repeat-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 769.363891601562 3 769.028176 2304.0627 1.2916 0.00099329 -0.52034 -0.00040016 0.77128 0.00059313 769.362502911069 73.1 0.69748 73.1 72.812 73.509 0 48 13 5 0 0 0 2.8529E-05 1 82127 66.536 57.604 1 24522000 406 3219 379 380 464 464 ACMTYFPR 8 Unmodified _ACMTYFPR_ 0 0 0 Q8IZL8 Q8IZL8 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 523.233764648438 2 523.23333 1044.45211 0.56381 0.000295 0.26128 0.00013671 0.82509 0.00043171 523.233453883877 45.342 0.59679 45.342 45.085 45.682 0 21 11 2 0 0 0 0.017318 1 43217 56.091 45.677 1 6491300 407 2660 380 381 465 465 ACNCLLLK 8 Unmodified _ACNCLLLK_ 0 0 0 P13929;P09104 P13929;P09104 P13929 ENO3;ENO2 Beta-enolase;Gamma-enolase MULTI-MSMS 210214_Eclipse_Hela_QC 496.257263183594 2 496.256805 990.499057 0.10769 5.3443E-05 -0.70986 -0.00035227 -0.60217 -0.00029883 496.256571016239 36.297 0.88465 36.297 35.786 36.67 0 30 17 2 0 0 0 0.0075874 1 30476 71.852 45.159 1 17801000 408 870;767 381 382 466 466 ACNDATLVQITSNMDSVGR 19 Unmodified _ACNDATLVQITSNMDSVGR_ 0 0 0 Q9HAV0 Q9HAV0 Q9HAV0 GNB4 Guanine nucleotide-binding protein subunit beta-4 MULTI-MSMS 210214_Eclipse_Hela_QC 1026.97863769531 2 1026.47787 2050.94119 1.7985 0.0018461 -0.31012 -0.00031833 1.4884 0.0015278 1026.4780434029 81.022 0.49741 81.022 80.755 81.252 0 29 9 4 0 0 0 5.3585E-06 1 93244 88.282 82.675 1 7027800 409 3538 382 383 467 467 ACNPLDAGPMVVHCSAGVGR 20 Unmodified _ACNPLDAGPMVVHCSAGVGR_ 0 0 0 P10586 P10586 P10586 PTPRF Receptor-type tyrosine-protein phosphatase F MSMS 210214_Eclipse_Hela_QC 689.991088867188 3 689.988888 2066.94483 NaN NaN NaN NaN NaN NaN NaN 58.117 1 58.117 57.617 58.617 0 0 0 0 0.042834 1 61281 35.133 31.597 1 410 806 383 384 468 468 ACNPQPNGENAISAR 15 Unmodified _ACNPQPNGENAISAR_ 0 0 0 Q8NHP8 Q8NHP8 Q8NHP8 PLBD2 Putative phospholipase B-like 2;Putative phospholipase B-like 2 32 kDa form;Putative phospholipase B-like 2 45 kDa form MULTI-MSMS 210214_Eclipse_Hela_QC 799.877990722656 2 799.870627 1597.7267 0.51701 0.00041354 4.0841 0.0032667 4.6011 0.0036803 800.374523522474 24.907 0.54613 24.907 24.618 25.164 0 20 10 3 0 0 0 0.020003 1 14104 30.55 15.578 1 4236800 411 2774 384 385 469 469 ACPRPEGLNFQDLK 14 Unmodified _ACPRPEGLNFQDLK_ 0 0 1 P15927 P15927 P15927 RPA2 Replication protein A 32 kDa subunit MULTI-MSMS 210214_Eclipse_Hela_QC 548.945434570312 3 548.943602 1643.80898 1.0104 0.00055465 -0.34035 -0.00018684 0.67005 0.00036782 548.943507970556 50.85 1.0691 50.85 50.479 51.548 0 58 21 4 0 0 0 0.00080488 1 50841 53.491 42.051 1 42821000 412 907 385 386 470 470 ACQSCPSEPNTAALQAALAR 20 Unmodified _ACQSCPSEPNTAALQAALAR_ 0 0 0 Q8TEX9 Q8TEX9 Q8TEX9 IPO4 Importin-4 MULTI-MSMS 210214_Eclipse_Hela_QC 1058.50329589844 2 1058.49914 2114.98372 1.2106 0.0012814 -0.55649 -0.00058904 0.6541 0.00069236 1059.00030387286 68.016 0.79483 68.016 67.71 68.505 0 54 15 5 0 0 0 3.6389E-05 1 75019 89.959 86.831 1 10804000 413 2813 386 387 471 471 ACQSIYPLHDVFVR 14 Unmodified _ACQSIYPLHDVFVR_ 0 0 0 P61247 P61247 P61247 RPS3A 40S ribosomal protein S3a MULTI-MSMS 210214_Eclipse_Hela_QC 569.290100097656 3 568.95573 1703.84536 0.9922 0.00056452 -0.31242 -0.00017775 0.67979 0.00038677 568.955730026899 67.983 1.4838 67.983 67.27 68.753 0 123 29 6 0 0 0 5.9747E-05 2 75537 80.3 76.459 1 378140000 414 1611 387 388 472;473 473 ACQSIYPLHDVFVR 14 Unmodified _ACQSIYPLHDVFVR_ 0 0 0 P61247 P61247 P61247 RPS3A 40S ribosomal protein S3a MULTI-MSMS 210214_Eclipse_Hela_QC 853.432250976562 2 852.929957 1703.84536 1.3629 0.0011625 -0.12726 -0.00010854 1.2357 0.001054 853.431401770638 67.979 0.84452 67.979 67.66 68.505 0 57 16 5 0 0 0 2.3072E-06 1 74886 112.13 103.61 1 19599000 415 1611 387 388 474 474 ACSAIHAVNLR 11 Unmodified _ACSAIHAVNLR_ 0 0 0 Q13045 Q13045 Q13045 FLII Protein flightless-1 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 606.319396972656 2 606.319314 1210.62407 0.59788 0.00036251 -0.48077 -0.0002915 0.11711 7.1007E-05 606.319236076841 26.726 0.29899 26.726 26.557 26.856 0 10 5 3 0 0 0 0.00088779 1 16780 69.954 53.177 1 3990700 416 1938 388 389 475 475 ACSPAASEITGLSTAVLAAHGR 22 Unmodified _ACSPAASEITGLSTAVLAAHGR_ 0 0 0 Q9NSU2 Q9NSU2 Q9NSU2 TREX1 Three-prime repair exonuclease 1 MULTI-MSMS 210214_Eclipse_Hela_QC 714.36669921875 3 714.032027 2139.07425 1.0969 0.00078321 -0.2132 -0.00015223 0.88369 0.00063098 714.366410411318 79.04 0.84559 79.04 78.667 79.513 0 40 16 4 0 0 0 0.0026939 2 90632 36.454 33.635 1 5733400 417 3645 389 390 476;477 477 ACTILLR 7 Unmodified _ACTILLR_ 0 0 0 P49368 P49368 P49368 CCT3 T-complex protein 1 subunit gamma MULTI-MSMS 210214_Eclipse_Hela_QC 423.74658203125 2 423.746931 845.479308 -0.084171 -3.5667E-05 0.013919 5.898E-06 -0.070253 -2.9769E-05 423.747081143467 38.075 0.64643 38.075 37.745 38.392 0 40 12 5 0 0 0 0.0054803 1 32736 99.279 52.908 1 77565000 418 1369 390 391 478 478 ACVCQTLGISPEEK 14 Unmodified _ACVCQTLGISPEEK_ 0 0 0 A6NHR9 A6NHR9 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 796.376953125 2 796.376365 1590.73818 1.2919 0.0010289 -0.63215 -0.00050343 0.65977 0.00052542 796.376063221656 49.5 0.44817 49.5 49.187 49.635 0 12 8 2 0 0 0 0.0071999 1 49196 45.879 33.263 1 2744900 419 22 391 392 479 479 ACVMMQGR 8 Unmodified _ACVMMQGR_ 0 0 0 P00491 P00491 P00491 PNP Purine nucleoside phosphorylase MULTI-MSMS 210214_Eclipse_Hela_QC 476.711639404297 2 476.711708 951.408862 0.045492 2.1686E-05 -0.56808 -0.00027081 -0.52259 -0.00024913 476.711795625039 22.877 0.54807 22.877 22.703 23.251 0 20 10 3 0 0 0 0.0032811 1 11262 89.903 75.238 1 15007000 420 626 392 393 480 480 ACYALENFVENLGPK 15 Unmodified _ACYALENFVENLGPK_ 0 0 0 Q8TEX9 Q8TEX9 Q8TEX9 IPO4 Importin-4 MULTI-MSMS 210214_Eclipse_Hela_QC 863.424926757812 2 862.919255 1723.82396 1.4498 0.001251 1.1416 0.00098507 2.5913 0.0022361 862.919643511501 98.834 0.84627 98.834 98.461 99.307 0 38 16 3 0 0 0 0.051562 1 117731 39.917 36.154 1 12005000 421 2813 393 394 481 481 ACYGVLR 7 Unmodified _ACYGVLR_ 0 0 0 P23396 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 210214_Eclipse_Hela_QC 419.715454101562 2 419.71563 837.416708 -0.044211 -1.8556E-05 0.10209 4.2851E-05 0.057883 2.4294E-05 419.715648023756 29.255 0.63489 29.255 28.944 29.579 0 22 12 2 0 0 0 0.0085186 1 20216 82.939 56.461 1 45358000 422 1023 394 395 482 482 ADAASQVLLGSGLTILSQPLMYVK 24 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADAASQVLLGSGLTILSQPLMYVK_ 1 0 0 Q9Y6C9 Q9Y6C9 Q9Y6C9 MTCH2 Mitochondrial carrier homolog 2 MULTI-MSMS 210214_Eclipse_Hela_QC 1259.6904296875 2 1259.18528 2516.35601 2.369 0.002983 0.28278 0.00035607 2.6517 0.003339 1259.68745095869 113.58 0.29779 113.58 113.45 113.75 0 22 5 6 0 0 0 4.4403E-84 1 138332 216.99 212.67 1 33007000 423 4146 395 396 483 483 ADAASSLTVDVTPPTAK 17 Unmodified _ADAASSLTVDVTPPTAK_ 0 0 0 Q9H8Y8 Q9H8Y8 Q9H8Y8 GORASP2 Golgi reassembly-stacking protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 822.931335449219 2 822.427967 1642.84138 1.0168 0.00083628 0.15891 0.0001307 1.1758 0.00096697 822.427840836648 62.911 0.64606 62.911 62.528 63.174 0 37 12 4 0 0 0 2.84E-05 2 67872 90.731 81.298 1 8860600 424 3511 396 397 484;485 484 ADAECYTAMK 10 Unmodified _ADAECYTAMK_ 0 0 0 O94905 O94905 O94905 ERLIN2 Erlin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 580.242492675781 2 580.241549 1158.46855 0.46013 0.00026699 -0.053216 -3.0878E-05 0.40691 0.00023611 580.241600470893 26.917 0.34855 26.917 26.756 27.105 0 16 6 3 0 0 0 0.00034441 1 17041 93.178 84.233 1 10369000 425 524 397 398 486 486 ADAEGESDLENSR 13 Unmodified _ADAEGESDLENSR_ 0 0 0 Q9Y490 Q9Y490 Q9Y490 TLN1 Talin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 697.299377441406 2 696.797317 1391.58008 0.68155 0.00047491 -0.16247 -0.00011321 0.51909 0.0003617 696.797126027928 22.678 0.34886 22.678 22.504 22.853 0 13 6 3 0 0 0 2.5127E-06 1 10996 113.69 109.64 1 6465400 426 4084 398 399 487 487 ADAEVIILPK 10 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADAEVIILPK_ 1 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 210214_Eclipse_Hela_QC 555.824523925781 2 555.823889 1109.63323 1.3989 0.00077755 0.36802 0.00020456 1.7669 0.00098211 555.823869238707 97.723 0.49673 97.723 97.417 97.914 0 22 9 3 0 0 0 0.0018922 1 116367 61.962 53.622 1 1169300 427 400 399 400 488 488 ADAEVIILPK 10 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADAEVIILPK_ 1 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-SECPEP 210214_Eclipse_Hela_QC 1111.20886230469 1 1110.6405 1109.63323 1.6645 0.0018486 0.53196 0.00059081 2.1964 0.0024394 1110.64089031594 97.691 0.74532 97.691 97.318 98.063 0 40 14 4 0 0 0 0.013862 1 116789 61.999 51.126 1 10992000 428 400 399 400 489 489 ADAEYYAAHK 10 Unmodified _ADAEYYAAHK_ 0 0 0 O75477 O75477 O75477 ERLIN1 Erlin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 569.762451171875 2 569.76182 1137.50909 0.98958 0.00056382 -0.4201 -0.00023936 0.56947 0.00032446 569.761441269889 18.945 0.59194 18.945 18.677 19.269 0 28 11 4 0 0 0 6.3676E-05 1 5591 112.84 102.88 1 9367200 429 459 400 401 490 490 ADAFGDELFSVFEGDSTTAAGTK 23 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADAFGDELFSVFEGDSTTAAGTK_ 1 0 0 P42285 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 210214_Eclipse_Hela_QC 1189.529296875 2 1189.53716 2377.05977 2.036 0.0024218 0.63688 0.0007576 2.6728 0.0031794 1190.03918497897 112.7 0.44768 112.7 112.48 112.93 0 32 8 6 0 0 0 1.3925E-33 1 137128 214.53 211.82 1 11085000 430 1270 401 402 491 491 ADAGFVYSEAVASHYMR 17 Unmodified _ADAGFVYSEAVASHYMR_ 0 0 0 O14936 O14936 O14936 CASK Peripheral plasma membrane protein CASK MULTI-MSMS 210214_Eclipse_Hela_QC 625.625061035156 3 625.289437 1872.84648 0.73882 0.00046197 0.13662 8.5424E-05 0.87543 0.0005474 625.623817580885 71.584 0.59747 71.584 71.318 71.916 0 34 11 4 0 0 0 0.031995 1 80189 25.198 20.955 1 3850100 431 220 402 403 492 492 ADAHLGSSSVALPK 14 Unmodified _ADAHLGSSSVALPK_ 0 0 0 Q8NFQ8 Q8NFQ8 Q8NFQ8 TOR1AIP2 Torsin-1A-interacting protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 451.576843261719 3 451.577136 1351.70958 -0.4268 -0.00019273 -0.042204 -1.9058E-05 -0.46901 -0.00021179 451.577129455488 35.881 0.63298 35.881 35.59 36.223 0 26 12 3 0 0 0 0.00015616 1 29723 53.001 42.391 1 6424700 432 2769 403 404 493 493 ADALQAGASQFETSAAK 17 Unmodified _ADALQAGASQFETSAAK_ 0 0 0 Q15836;P63027 Q15836 Q15836 VAMP3;VAMP2 Vesicle-associated membrane protein 3;Vesicle-associated membrane protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 833.40869140625 2 833.407566 1664.80058 1.3737 0.0011448 -0.031553 -2.6297E-05 1.3421 0.0011185 833.4075615516 53.615 0.74695 53.615 53.291 54.038 0 48 14 5 0 0 0 8.7342E-06 1 54762 98.531 98.531 1 30566000 433 2219 404 405 494 494 ADALYPVVSAASICAK 16 Unmodified _ADALYPVVSAASICAK_ 0 0 0 O75792 O75792 O75792 RNASEH2A Ribonuclease H2 subunit A MULTI-MSMS 210214_Eclipse_Hela_QC 818.926574707031 2 818.424173 1634.83379 1.0011 0.00081932 0.45834 0.00037512 1.4594 0.0011944 818.424299427318 78.68 0.64613 78.68 78.369 79.015 0 27 12 3 0 0 0 0.0003614 1 89946 64.121 58.149 1 4335100 434 483 405 406 495 495 ADAPVALVVHMAPASVLVDSR 21 Unmodified _ADAPVALVVHMAPASVLVDSR_ 0 0 0 Q9BQ52 Q9BQ52 Q9BQ52 ELAC2 Zinc phosphodiesterase ELAC protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 707.054016113281 3 706.71738 2117.13031 1.8669 0.0013194 -0.0083594 -5.9077E-06 1.8586 0.0013135 707.051743639563 97.827 0.54638 97.827 97.517 98.063 0 42 10 5 0 0 0 0.0005258 1 116559 47.155 45.358 1 6007600 435 3217 406 407 496 496 ADATNVNNWHWTER 14 Unmodified _ADATNVNNWHWTER_ 0 0 0 O95433 O95433 O95433 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 MULTI-MSMS 210214_Eclipse_Hela_QC 571.928771972656 3 571.92912 1712.76553 0.73798 0.00042207 0.20954 0.00011984 0.94752 0.00054191 571.929133992614 48.481 1.1671 48.481 48.12 49.287 0 72 23 5 0 0 0 8.5563E-05 1 47563 62.044 57.496 1 38539000 436 570 407 408 497 497 ADAVQDSEMVELVELEIR 18 Unmodified _ADAVQDSEMVELVELEIR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1024.00756835938 2 1023.50662 2044.99869 1.7545 0.0017958 -0.17468 -0.00017878 1.5798 0.001617 1023.50642548412 107.53 0.44808 107.53 107.41 107.86 0 23 8 3 0 0 0 7.1011E-08 1 130140 106.17 97.445 1 47346000 437 1371 408 409 498 498 ADAVWNK 7 Unmodified _ADAVWNK_ 0 0 0 P42704 P42704 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 402.206207275391 2 402.205953 802.397353 0.11746 4.7242E-05 0.76063 0.00030593 0.87809 0.00035317 402.206006166001 23.41 0.4492 23.41 23.201 23.65 0 17 8 3 0 0 0 0.040657 1 12023 50.855 23.688 1 9853500 438 1278 409 410 499 499 ADAWEEIRR 9 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADAWEEIRR_ 1 0 1 O94874 O94874 O94874 UFL1 E3 UFM1-protein ligase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 594.295043945312 2 594.293819 1186.57309 1.3726 0.00081575 0.63289 0.00037612 2.0055 0.0011919 594.294029612864 60.505 1.0944 60.505 60.099 61.193 0 37 21 3 0 0 0 0.003109 1 64609 71.501 56.35 1 5286400 439 520 410 411 500 500 ADCASGIFLAAEK 13 Unmodified _ADCASGIFLAAEK_ 0 0 0 O43747 O43747 O43747 AP1G1 AP-1 complex subunit gamma-1 MULTI-MSMS 210214_Eclipse_Hela_QC 676.827941894531 2 676.829377 1351.6442 0.35646 0.00024126 -0.27373 -0.00018527 0.082736 5.5998E-05 676.829540546961 62.349 0.83718 62.349 61.89 62.727 0 42 16 3 0 0 0 0.012717 1 66869 42.629 33.766 1 13651000 440 334 411 412 501 501 ADCLMGEFK 9 Unmodified _ADCLMGEFK_ 0 0 0 Q9NZM1 Q9NZM1 Q9NZM1 MYOF Myoferlin MULTI-MSMS 210214_Eclipse_Hela_QC 535.736022949219 2 535.735902 1069.45725 0.54955 0.00029441 -0.6814 -0.00036505 -0.13185 -7.0638E-05 535.735712299273 52.021 0.59756 52.021 51.647 52.245 0 24 11 3 0 0 0 0.017937 1 52653 49.715 37.359 1 6332800 441 3768 412 413 502 502 ADCPPGNPAPTSNHGPDATEAEEDFVDPWTVQTSSAK 37 Unmodified _ADCPPGNPAPTSNHGPDATEAEEDFVDPWTVQTSSAK_ 0 0 0 P23381 P23381 P23381 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS MULTI-MSMS 210214_Eclipse_Hela_QC 1299.91064453125 3 1299.23778 3894.6915 1.0855 0.0014103 -0.88279 -0.0011469 0.20273 0.00026339 1299.90531143912 82.44 0.95881 82.44 81.998 82.956 0 108 20 7 0 0 0 1.418E-05 1 95042 45.47 43.848 1 99183000 442 1022 413 414 503 503 ADCTITMADSDFLALMTGK 19 Unmodified _ADCTITMADSDFLALMTGK_ 0 0 0 P22307 P22307 P22307 SCP2 Non-specific lipid-transfer protein MULTI-MSMS 210214_Eclipse_Hela_QC 1030.97351074219 2 1030.9705 2059.92645 2.5467 0.0026256 -0.86454 -0.00089132 1.6822 0.0017343 1031.47159402985 108.28 0.3982 108.28 108.06 108.46 0 30 7 6 0 0 0 1.0949E-35 1 131031 169.04 159.25 1 68050000 443 1008 414 415 504 504 ADDGRPFPQVIK 12 Unmodified _ADDGRPFPQVIK_ 0 0 1 P04075 P04075 P04075 ALDOA Fructose-bisphosphate aldolase A MULTI-MSMS 210214_Eclipse_Hela_QC 448.242156982422 3 448.241976 1341.7041 0.28062 0.00012579 -0.3038 -0.00013618 -0.02318 -1.039E-05 448.241997835602 42.713 1.9415 42.713 42.249 44.19 0 136 38 6 0 0 0 0.0017653 2 39181 63.091 48.834 1 689650000 444 655 415 416 505;506 505 ADDGRPFPQVIK 12 Unmodified _ADDGRPFPQVIK_ 0 0 1 P04075 P04075 P04075 ALDOA Fructose-bisphosphate aldolase A MULTI-MSMS 210214_Eclipse_Hela_QC 671.859802246094 2 671.859326 1341.7041 0.8518 0.00057229 0.026221 1.7617E-05 0.87802 0.00058991 671.859385579193 42.722 1.245 42.722 42.249 43.494 0 74 24 5 0 0 0 6.8531E-05 1 39257 123.79 87.099 1 139060000 445 655 415 416 507 507 ADDIDIEAMLEAPYK 15 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADDIDIEAMLEAPYK_ 1 0 0 Q14498 Q14498 Q14498 RBM39 RNA-binding protein 39 MULTI-MSMS 210214_Eclipse_Hela_QC 868.91064453125 2 868.408385 1734.80222 2.1338 0.001853 0.2118 0.00018393 2.3456 0.002037 868.909952446719 110.57 0.44853 110.57 110.45 110.9 0 17 8 3 0 0 0 5.1981E-12 1 134250 156.71 142.55 1 15934000 446 2087 416 417 508 508 ADDIDIEAMLEAPYKK 16 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADDIDIEAMLEAPYKK_ 1 0 1 Q14498 Q14498 Q14498 RBM39 RNA-binding protein 39 MULTI-SECPEP 210214_Eclipse_Hela_QC 931.990966796875 2 932.455867 1862.89718 1.2607 0.0011755 -0.67992 -0.00063399 0.58074 0.00054152 932.956863064204 106.54 0.34859 106.54 106.27 106.62 0 18 6 5 0 0 0 6.0319E-13 1 128650 146.07 137.77 1 29309000 447 2087 417 418 509 509 ADDLDFETGDAGASATFPMQCSALR 25 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADDLDFETGDAGASATFPMQCSALR_ 1 0 0 P63241;Q6IS14 P63241 P63241 EIF5A;EIF5AL1 Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-1-like MULTI-MSMS 210214_Eclipse_Hela_QC 1345.08642578125 2 1344.58125 2687.14795 1.6406 0.002206 -0.2184 -0.00029365 1.4222 0.0019123 1345.08254415551 107.88 0.74743 107.88 107.41 108.16 0 49 14 8 0 0 0 3.6043E-175 1 130476 305.29 296.95 1 243440000 448 1716 418 419 510 510 ADDLLPLGDQTQDGDFGSR 19 Unmodified _ADDLLPLGDQTQDGDFGSR_ 0 0 0 O43290 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1010.47119140625 2 1010.46634 2018.91813 1.363 0.0013773 0.62689 0.00063345 1.9899 0.0020107 1010.46758306092 83.239 0.74677 83.239 82.757 83.504 0 41 14 4 0 0 0 0.00011243 1 96244 79.875 72.856 1 10704000 449 296 419 420 511 511 ADDPSSYMEVVQAANTSGNWEELVK 25 Unmodified _ADDPSSYMEVVQAANTSGNWEELVK_ 0 0 0 Q00610 Q00610 Q00610 CLTC Clathrin heavy chain 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1371.12731933594 2 1370.62397 2739.23339 1.5318 0.0020995 -0.029698 -4.0705E-05 1.5021 0.0020588 1371.12552354786 106.5 0.49045 106.5 106.32 106.81 0 29 9 7 0 0 0 1.8697E-68 2 128644 268.61 264.66 1 154920000 450 1802 420 421 512;513 512 ADDPTMGEGPDK 12 Unmodified _ADDPTMGEGPDK_ 0 0 0 P61764 P61764 P61764 STXBP1 Syntaxin-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 616.758239746094 2 616.758617 1231.50268 0.28848 0.00017792 0.054565 3.3653E-05 0.34304 0.00021157 616.758374720968 22.429 0.34848 22.429 22.305 22.653 0 9 6 2 0 0 0 0.046081 1 10651 33.89 24.533 1 2376100 451 1623 421 422 514 514 ADDPYAHLSK 10 Unmodified _ADDPYAHLSK_ 0 0 0 Q8NE71 Q8NE71 Q8NE71 ABCF1 ATP-binding cassette sub-family F member 1 MULTI-MSMS 210214_Eclipse_Hela_QC 558.770202636719 2 558.769645 1115.52474 0.48868 0.00027306 0.27546 0.00015392 0.76414 0.00042698 558.769769866925 23.426 0.4492 23.426 23.201 23.65 0 20 8 3 0 0 0 0.00016849 1 12018 101.97 46.604 1 22318000 452 2754 422 423 515 515 ADDTSAATIEK 11 Unmodified _ADDTSAATIEK_ 0 0 0 Q9Y2W2 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 MULTI-SECPEP 210214_Eclipse_Hela_QC 561.94140625 2 561.269675 1120.5248 0.29831 0.00016743 0.63226 0.00035487 0.93057 0.0005223 561.269871243371 21.335 0.44842 21.335 21.161 21.609 0 15 8 2 0 0 0 0.0061181 1 8984 93.667 64.749 1 8506900 453 4022 423 424 516 516 ADDVDQQQTTNTVEEPLDLIR 21 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADDVDQQQTTNTVEEPLDLIR_ 1 0 0 P62310 P62310 P62310 LSM3 U6 snRNA-associated Sm-like protein LSm3 MULTI-MSMS 210214_Eclipse_Hela_QC 1223.07043457031 2 1221.58517 2441.15579 1.8799 0.0022965 -0.30966 -0.00037828 1.5702 0.0019182 1222.08697840638 106.84 0.8421 106.84 106.67 107.51 0 38 16 5 0 0 0 3.3374E-07 2 129083 89.507 77.449 1 25938000 454 1658 424 425 517;518 517 ADEASELACPTPK 13 Unmodified _ADEASELACPTPK_ 0 0 0 P49327 P49327 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 210214_Eclipse_Hela_QC 694.822204589844 2 694.821749 1387.62895 0.7164 0.00049777 -0.2384 -0.00016564 0.47801 0.00033213 694.821814073818 34.981 0.72203 34.981 34.621 35.343 0 38 14 3 0 0 0 1.2462E-08 1 28274 123.8 119.65 1 55872000 455 1365 425 426 519 519 ADEAYLIGR 9 Unmodified _ADEAYLIGR_ 0 0 0 P11498 P11498 P11498 PC Pyruvate carboxylase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 504.261169433594 2 504.261456 1006.50836 0.076606 3.8629E-05 0.13627 6.8717E-05 0.21288 0.00010735 504.261563854911 45.788 0.59711 45.788 45.433 46.03 0 20 11 2 0 0 0 0.00025403 2 43920 110.31 85.678 1 14012000 456 835 426 427 520;521 521 ADEDPIMGFHQMFLLK 16 Unmodified _ADEDPIMGFHQMFLLK_ 0 0 0 P61970 P61970 P61970 NUTF2 Nuclear transport factor 2 MULTI-MSMS 210214_Eclipse_Hela_QC 631.642395019531 3 631.307552 1890.90083 1.6903 0.0010671 -0.21735 -0.00013721 1.473 0.0009299 631.64197139452 100.27 1.0941 100.27 99.854 100.95 0 95 21 6 0 0 0 0.00023127 2 119659 58.831 52.668 1 51239000 457 1633 427 428 522;523 522 ADEELEALRR 10 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADEELEALRR_ 1 0 1 O14737 O14737 O14737 PDCD5 Programmed cell death protein 5 MULTI-MSMS 210214_Eclipse_Hela_QC 622.317016601562 2 622.317491 1242.62043 0.88676 0.00055185 -0.071657 -4.4593E-05 0.81511 0.00050725 622.317527806581 59.677 0.79572 59.677 59.104 59.9 0 39 15 4 0 0 0 7.2541E-05 1 63333 112.11 100.51 1 33033000 458 204 428 429 524 524 ADEGISFR 8 Unmodified _ADEGISFR_ 0 0 0 Q06830 Q06830 Q06830 PRDX1 Peroxiredoxin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 447.719451904297 2 447.719424 893.424296 0.11793 5.2798E-05 -0.65911 -0.0002951 -0.54119 -0.0002423 447.719184869609 35.07 2.2159 35.07 34.502 36.718 0 122 45 5 0 0 0 8.0319E-06 2 28509 152.47 87.923 1 724000000 459 1870 429 430 525;526 525 ADEHVIDQGDDGDNFYVIER 20 Unmodified _ADEHVIDQGDDGDNFYVIER_ 0 0 0 P13861 P13861 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit MULTI-MSMS 210214_Eclipse_Hela_QC 769.678344726562 3 769.676854 2306.00873 1.2296 0.00094642 -0.2078 -0.00015994 1.0218 0.00078648 770.011075571751 68.245 0.74547 68.245 67.909 68.654 0 52 14 5 0 0 0 3.9722E-07 1 75292 93.269 89.775 1 33717000 460 869 430 431 527 527 ADEVLEILK 9 Unmodified _ADEVLEILK_ 0 0 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 210214_Eclipse_Hela_QC 515.294738769531 2 515.294965 1028.57538 0.19924 0.00010267 -0.045921 -2.3663E-05 0.15332 7.9007E-05 515.294819110376 73.905 0.44807 73.905 73.609 74.057 0 15 8 2 0 0 0 0.035143 1 83392 41.876 24.49 1 2361200 461 472 431 432 528 528 ADEVVWVR 8 Unmodified _ADEVVWVR_ 0 0 0 P14868 P14868 P14868 DARS Aspartate--tRNA ligase, cytoplasmic MULTI-MSMS 210214_Eclipse_Hela_QC 487.259368896484 2 487.258717 972.50288 0.64513 0.00031434 -1.2219 -0.00059537 -0.57675 -0.00028103 487.258637509274 48.913 0.84048 48.913 48.596 49.436 0 39 16 4 0 0 0 0.0003922 1 48314 128.57 83.874 1 12524000 462 891 432 433 529 529 ADFAQACQDAGVR 13 Unmodified _ADFAQACQDAGVR_ 0 0 0 P11498 P11498 P11498 PC Pyruvate carboxylase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 704.8173828125 2 704.817332 1407.62011 0.80695 0.00056875 -0.88138 -0.00062121 -0.074427 -5.2457E-05 704.81721035331 36.839 0.63921 36.839 36.521 37.16 0 47 12 5 0 0 0 8.737E-19 1 31182 155.11 150.5 1 26200000 463 835 433 434 530 530 ADFCIIHYAGK 11 Unmodified _ADFCIIHYAGK_ 0 0 0 P35579 P35579 P35579 MYH9 Myosin-9 MULTI-MSMS 210214_Eclipse_Hela_QC 432.213226318359 3 432.213141 1293.61759 0.84083 0.00036342 -0.063577 -2.7479E-05 0.77725 0.00033594 432.213136773802 54.018 0.88556 54.018 53.69 54.575 0 42 17 4 0 0 0 0.040887 1 55331 22.232 18.558 1 18707000 464 1191 434 435 531 531 ADFCIIHYAGK 11 Unmodified _ADFCIIHYAGK_ 0 0 0 P35579 P35579 P35579 MYH9 Myosin-9 MULTI-MSMS 210214_Eclipse_Hela_QC 647.817443847656 2 647.816073 1293.61759 1.281 0.00082983 -0.0099344 -6.4356E-06 1.271 0.0008234 647.816147302734 54.014 0.59314 54.014 53.74 54.333 0 36 11 4 0 0 0 6.754E-06 1 55644 115.71 100.17 1 29487000 465 1191 434 435 532 532 ADFDDRVSDEEK 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADFDDRVSDEEK_ 1 0 1 P52907 P52907 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 MULTI-MSMS 210214_Eclipse_Hela_QC 734.31689453125 2 734.315342 1466.61613 0.8293 0.00060896 0.31261 0.00022955 1.1419 0.00083852 734.315644140787 44.742 0.54732 44.742 44.438 44.986 0 24 10 3 0 0 0 0.00014158 1 42298 80.871 69.706 1 12910000 466 1486 435 436 533 533 ADFDNTVAIHPTSSEELVTLR 21 Unmodified _ADFDNTVAIHPTSSEELVTLR_ 0 0 0 P00390 P00390 P00390 GSR Glutathione reductase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 772.724548339844 3 772.388645 2314.1441 1.1255 0.00086933 0.30161 0.00023296 1.4271 0.0011023 772.723149015252 78.156 0.79639 78.156 77.871 78.667 0 66 15 6 0 0 0 5.4131E-06 2 89158 71.894 67.866 1 46347000 467 623 436 437 534;535 535 ADFDTYDDR 9 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADFDTYDDR_ 1 0 0 Q15056 Q15056 Q15056 EIF4H Eukaryotic translation initiation factor 4H MULTI-SECPEP 210214_Eclipse_Hela_QC 1158.87890625 1 1159.45382 1158.44655 1.0064 0.0011668 -0.13523 -0.0001568 0.87114 0.0010101 1159.45360224377 63.697 0.89608 63.697 63.324 64.22 0 47 17 4 0 0 0 3.8681E-14 1 68972 182.53 171.16 1 20603000 468 2145 437 438 536 536 ADFFEDENGQR 11 Unmodified _ADFFEDENGQR_ 0 0 0 O95573 O95573 O95573 ACSL3 Long-chain-fatty-acid--CoA ligase 3 MULTI-MSMS 210214_Eclipse_Hela_QC 664.281372070312 2 664.281106 1326.54766 0.8258 0.00054856 0.73499 0.00048824 1.5608 0.0010368 664.281101936676 43.117 0.69773 43.117 42.796 43.494 0 40 13 4 0 0 0 0.00019015 1 39920 92.838 62.671 1 20457000 469 581 438 439 537 537 ADFPAGIPECGTDALR 16 Unmodified _ADFPAGIPECGTDALR_ 0 0 0 P26640 P26640 P26640 VARS Valine--tRNA ligase MULTI-MSMS 210214_Eclipse_Hela_QC 845.901245117188 2 845.398686 1688.78282 0.93545 0.00079083 0.025451 2.1516E-05 0.9609 0.00081234 845.398840202063 75.424 0.74784 75.424 74.953 75.701 0 50 14 4 0 0 0 1.7791E-05 1 85174 96.745 89.616 1 21169000 470 1064 439 440 538 538 ADFSGMSQTDLSLSK 15 Unmodified _ADFSGMSQTDLSLSK_ 0 0 0 P35237 P35237 P35237 SERPINB6 Serpin B6 MULTI-MSMS 210214_Eclipse_Hela_QC 794.374694824219 2 793.87197 1585.72939 0.84628 0.00067184 -0.079769 -6.3326E-05 0.76651 0.00060851 793.872073075815 66.971 0.814 66.971 66.597 67.411 0 48 16 5 0 0 0 7.8372E-11 1 73415 126.76 110.63 1 58989000 471 1179 440 441 539 539 ADFSGMSTEK 10 Unmodified _ADFSGMSTEK_ 0 0 0 P50452 P50452 P50452 SERPINB8 Serpin B8 MULTI-MSMS 210214_Eclipse_Hela_QC 536.734191894531 2 536.734414 1071.45428 -0.14786 -7.9359E-05 0.25553 0.00013715 0.10767 5.7792E-05 536.734387383402 27.378 0.39748 27.378 27.154 27.552 0 13 7 2 0 0 0 0.01113 1 17602 50.978 35.131 1 5902400 472 1414 441 442 540 540 ADGATSDDLDLHDDR 15 Unmodified _ADGATSDDLDLHDDR_ 0 0 0 Q07157 Q07157 Q07157 TJP1 Tight junction protein ZO-1 MULTI-MSMS 210214_Eclipse_Hela_QC 539.232543945312 3 539.232534 1614.67577 0.47483 0.00025604 -0.040625 -2.1906E-05 0.4342 0.00023414 539.566889558721 31.472 0.6964 31.472 31.022 31.719 0 17 13 2 0 0 0 0.027167 1 23399 20.252 12.076 1 4852400 473 1874 442 443 541 541 ADGELNVDSLITR 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADGELNVDSLITR_ 1 0 0 P62140 P62140 P62140 PPP1CB Serine/threonine-protein phosphatase PP1-beta catalytic subunit MULTI-MSMS 210214_Eclipse_Hela_QC 723.316101074219 2 722.867545 1443.72054 1.3458 0.00097285 0.21562 0.00015586 1.5614 0.0011287 722.867608399941 104.06 0.84562 104.06 103.73 104.58 0 53 16 5 0 0 0 3.1999E-19 2 125202 157.68 150.03 1 18432000 474 1640 443 444 542;543 543 ADGGTQVIDTK 11 Unmodified _ADGGTQVIDTK_ 0 0 0 P09622 P09622 P09622 DLD Dihydrolipoyl dehydrogenase, mitochondrial MSMS 210214_Eclipse_Hela_QC 552.780212402344 2 552.78021 1103.54587 NaN NaN NaN NaN NaN NaN NaN 22.539 1 22.539 22.039 23.039 0 0 0 0 5.178E-08 1 10737 156.83 105.77 1 475 780 444 445 544 544 ADGIVPETWIDGPK 14 Unmodified _ADGIVPETWIDGPK_ 0 0 0 Q96A35 Q96A35 Q96A35 MRPL24 39S ribosomal protein L24, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 749.884216308594 2 749.382831 1496.75111 1.0971 0.00082217 -0.26713 -0.00020018 0.83 0.00062199 749.382600925968 82.83 0.78488 82.83 82.521 83.306 0 38 16 4 0 0 0 0.0029916 2 95688 51.286 34.887 1 12560000 476 2956 445 446 545;546 545 ADGLLGMFLK 10 Unmodified _ADGLLGMFLK_ 0 0 0 Q8N766 Q8N766 Q8N766 EMC1 ER membrane protein complex subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 532.794250488281 2 532.794078 1063.5736 0.7864 0.00041899 -0.65924 -0.00035124 0.12715 6.7747E-05 532.793917730536 105.22 0.39877 105.22 104.98 105.38 0 13 7 2 0 0 0 0.0014205 1 126835 74.301 60.722 1 5560800 477 2706 446 447 547 547 ADGLYPVADNR 11 Unmodified _ADGLYPVADNR_ 0 0 0 CON__Q95M17 CON__Q95M17 CON__Q95M17 MULTI-MSMS 210214_Eclipse_Hela_QC 595.793640136719 2 595.793652 1189.57275 0.59715 0.00035578 -0.069515 -4.1417E-05 0.52763 0.00031436 595.793408266251 40.358 0.69622 40.358 40.064 40.76 0 32 13 4 0 0 0 0.00072448 1 36100 74.376 63.155 1 11903000 + 478 111 447 448 548 548 ADGNQLTLEER 11 Unmodified _ADGNQLTLEER_ 0 0 0 Q6YHK3 Q6YHK3 Q6YHK3 CD109 CD109 antigen MULTI-MSMS 210214_Eclipse_Hela_QC 623.306884765625 2 623.307123 1244.59969 0.25907 0.00016148 -1.2913 -0.00080486 -1.0322 -0.00064338 623.30636487612 33.759 1.1304 33.759 33.328 34.458 0 52 22 4 0 0 0 0.0006541 1 26644 76.282 60.64 1 19743000 479 2490 448 449 549 549 ADGQVAELLLR 11 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADGQVAELLLR_ 1 0 0 Q9Y285 Q9Y285 Q9Y285 FARSA Phenylalanine--tRNA ligase alpha subunit MULTI-MSMS 210214_Eclipse_Hela_QC 613.841003417969 2 613.840602 1225.66665 0.76786 0.00047134 0.1219 7.4825E-05 0.88975 0.00054617 613.840683823683 107.53 0.29826 107.53 107.41 107.71 0 11 5 3 0 0 0 1.6124E-05 1 130048 105.86 90.713 1 12649000 480 3997 449 450 550 550 ADGVHTVEPTEAGDYK 16 Unmodified _ADGVHTVEPTEAGDYK_ 0 0 0 Q13445 Q13445 Q13445 TMED1 Transmembrane emp24 domain-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 563.596923828125 3 563.596924 1687.76894 0.10361 5.8393E-05 0.59085 0.000333 0.69445 0.00039139 563.597149588394 29.156 0.3863 29.156 28.894 29.28 0 17 7 3 0 0 0 0.00027751 1 20162 42.257 30.091 1 17857000 481 1992 450 451 551 551 ADGVPVYLK 9 Unmodified _ADGVPVYLK_ 0 0 0 O14548 O14548 O14548 COX7A2L Cytochrome c oxidase subunit 7A-related protein, mitochondrial MSMS 210214_Eclipse_Hela_QC 481.271301269531 2 481.271293 960.528032 NaN NaN NaN NaN NaN NaN NaN 48.105 1 48.105 47.605 48.605 0 0 0 0 0.024215 1 47157 60.478 35.659 1 482 187 451 452 552 552 ADGVVEGIDVNGPK 14 Unmodified _ADGVVEGIDVNGPK_ 0 0 0 O94888 O94888 O94888 UBXN7 UBX domain-containing protein 7 MULTI-MSMS 210214_Eclipse_Hela_QC 685.352966308594 2 685.351531 1368.68851 0.84935 0.0005821 0.42254 0.00028959 1.2719 0.00087169 685.351682180965 52.596 0.59755 52.596 52.245 52.842 0 26 11 3 0 0 0 6.2983E-05 1 53422 90.05 75.384 1 7404900 483 521 452 453 553 553 ADGYVLEGK 9 Unmodified _ADGYVLEGK_ 0 0 0 P62241 P62241 P62241 RPS8 40S ribosomal protein S8 MULTI-MSMS 210214_Eclipse_Hela_QC 476.242523193359 2 476.242732 950.470912 0.047962 2.2842E-05 0.25677 0.00012229 0.30473 0.00014513 476.242793222491 29.454 0.94436 29.454 29.032 29.976 0 59 18 5 0 0 0 0.0022464 1 20288 76.679 53.788 1 211830000 484 1644 453 454 554 554 ADHDFVVQEDFMK 13 Unmodified _ADHDFVVQEDFMK_ 0 0 0 P62333 P62333 P62333 PSMC6 26S protease regulatory subunit 10B MULTI-MSMS 210214_Eclipse_Hela_QC 527.57275390625 3 527.573174 1579.69769 -0.65573 -0.00034595 0.65952 0.00034794 0.003788 1.9984E-06 527.573564886343 62.102 0.6883 62.102 61.79 62.479 0 35 13 3 0 0 0 0.00013126 1 66700 70.622 62.371 1 32648000 485 1665 454 455 555 555 ADHQPLTEASYVNLPTIALCNTDSPLR 27 Unmodified _ADHQPLTEASYVNLPTIALCNTDSPLR_ 0 0 0 P08865 P08865 P08865 RPSA 40S ribosomal protein SA MULTI-MSMS 210214_Eclipse_Hela_QC 999.834350585938 3 999.497588 2995.47093 1.6816 0.0016807 -0.72591 -0.00072554 0.95568 0.0009552 999.831217507811 98.735 1.7417 98.735 98.212 99.954 0 172 34 9 0 0 0 1.9578E-213 3 117628 232.69 224.66 1 649280000 486 762 455 456 556;557;558 556 ADHSFSDGVPSDSVEAAK 18 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADHSFSDGVPSDSVEAAK_ 1 0 0 Q99733 Q99733 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 MULTI-MSMS 210214_Eclipse_Hela_QC 931.418701171875 2 930.915952 1859.81735 1.2922 0.001203 0.28297 0.00026342 1.5752 0.0014664 930.916152856685 54.57 0.83784 54.57 54.285 55.123 0 56 16 5 0 0 0 4.2656E-26 1 56079 158.01 158.01 1 42359000 487 3190 456 457 559 559 ADHTLSSLEPAYSAK 15 Unmodified _ADHTLSSLEPAYSAK_ 0 0 0 Q5VW32 Q5VW32 Q5VW32 BROX BRO1 domain-containing protein BROX MULTI-SECPEP 210214_Eclipse_Hela_QC 531.29052734375 3 530.598377 1588.7733 0.41238 0.00021881 -0.12896 -6.8428E-05 0.28342 0.00015038 530.598332844797 43.466 0.54738 43.466 43.145 43.692 0 20 10 2 0 0 0 0.0048503 1 40610 46.41 41.272 1 13149000 488 2383 457 458 560 560 ADHVQSLAQLENLCK 15 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADHVQSLAQLENLCK_ 1 0 0 Q9UIA9 Q9UIA9 Q9UIA9 XPO7 Exportin-7 MULTI-MSMS 210214_Eclipse_Hela_QC 884.442077636719 2 884.438343 1766.86213 2.0209 0.0017874 0.38171 0.0003376 2.4026 0.002125 884.939793725355 81.896 0.49669 81.896 81.6 82.097 0 22 9 3 0 0 0 0.00028952 1 94528 75.739 68.172 1 4070200 489 3883 458 459 561 561 ADIDISGPNVDVDVPDVNIEGPDAK 25 Unmodified _ADIDISGPNVDVDVPDVNIEGPDAK_ 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 210214_Eclipse_Hela_QC 1283.126953125 2 1282.62175 2563.22896 2.0146 0.002584 0.25065 0.00032148 2.2652 0.0029055 1283.12349517725 100.88 0.84645 100.88 100.55 101.4 0 55 16 5 0 0 0 0.00074747 1 120641 46.319 34.627 1 9739900 490 1896 459 460 562 562 ADIDLTK 7 Unmodified _ADIDLTK_ 0 0 0 P62269 P62269 P62269 RPS18 40S ribosomal protein S18 MULTI-MSMS 210214_Eclipse_Hela_QC 388.213684082031 2 388.213443 774.412334 0.29744 0.00011547 -0.32252 -0.00012521 -0.025081 -9.7369E-06 388.213229438783 27.707 0.73807 27.707 27.154 27.892 0 42 14 5 0 0 0 0.0033088 1 18038 111.04 26.677 1 75161000 491 1652 460 461 563 563 ADIDVSGPSVDTDAPDLDIEGPEGK 25 Unmodified _ADIDVSGPSVDTDAPDLDIEGPEGK_ 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 210214_Eclipse_Hela_QC 1257.08703613281 2 1256.5823 2511.15004 2.1877 0.002749 0.22574 0.00028367 2.4134 0.0030326 1257.08428108401 87.644 0.59657 87.644 87.334 87.93 0 45 11 6 0 0 0 1.6011E-18 2 102502 131.56 120.61 1 11947000 492 1896 461 462 564;565 565 ADIEISGPK 9 Unmodified _ADIEISGPK_ 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 210214_Eclipse_Hela_QC 465.752624511719 2 465.250557 928.486562 0.14708 6.8427E-05 0.052959 2.4639E-05 0.20004 9.3067E-05 465.250393063519 32.648 0.67486 32.648 32.162 32.836 0 32 13 3 0 0 0 0.031706 2 25051 43.442 4.901 1 27064000 493 1896 462 463 566;567 567 ADIEMPFDPSK 11 Unmodified _ADIEMPFDPSK_ 0 0 0 O75369 O75369 O75369 FLNB Filamin-B MULTI-MSMS 210214_Eclipse_Hela_QC 625.293090820312 2 625.292096 1248.56964 0.90063 0.00056316 -0.17528 -0.0001096 0.72535 0.00045356 625.292181462896 72.237 0.94514 72.237 71.717 72.662 0 76 18 6 0 0 0 1.1116E-10 1 80995 139.38 121.95 1 67556000 494 445 463 464 568 568 ADIEVACYGYEGIDAVK 17 Unmodified _ADIEVACYGYEGIDAVK_ 0 0 0 P05198 P05198 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 938.770141601562 2 936.937841 1871.86113 1.0156 0.00095151 0.17006 0.00015934 1.1856 0.0011109 937.43963430593 79.69 1.3435 79.69 79.015 80.358 0 93 26 6 0 0 0 0.00026048 3 91510 65.563 61.918 1 107990000 495 683 464 465 569;570;571 570 ADIFVDPVLHTACALDIK 18 Unmodified _ADIFVDPVLHTACALDIK_ 0 0 0 Q92896 Q92896 Q92896 GLG1 Golgi apparatus protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 666.684936523438 3 666.683676 1997.0292 1.3142 0.00087618 -0.48698 -0.00032466 0.82726 0.00055152 667.017809486603 97.214 0.49794 97.214 96.919 97.417 0 31 9 5 0 0 0 0.015279 1 115744 24.041 20.547 1 2377000 496 2919 465 466 572 572 ADIGCTPGSGR 11 Unmodified _ADIGCTPGSGR_ 0 0 0 CON__Q2UVX4 CON__Q2UVX4 CON__Q2UVX4 MULTI-MSMS 210214_Eclipse_Hela_QC 545.751342773438 2 545.75093 1089.48731 0.045178 2.4656E-05 -0.16419 -8.9606E-05 -0.11901 -6.4951E-05 545.750950159865 19.993 0.54653 19.993 19.718 20.264 0 35 10 5 0 0 0 3.6746E-05 1 7094 104.89 86.903 1 44259000 + 497 92 466 467 573 573 ADIGVAMGIAGSDVSK 16 Unmodified _ADIGVAMGIAGSDVSK_ 0 0 0 P05023;P13637 P05023 P05023 ATP1A1;ATP1A3 Sodium/potassium-transporting ATPase subunit alpha-1;Sodium/potassium-transporting ATPase subunit alpha-3 MULTI-MSMS 210214_Eclipse_Hela_QC 745.851745605469 2 745.879598 1489.74464 0.86617 0.00064606 1.33 0.00099205 2.1962 0.0016381 745.879672560445 69.135 0.87247 69.135 68.704 69.576 0 61 17 5 0 0 0 0.00035049 2 76740 64.534 51.578 1 19801000 498 675 467 468 574;575 575 ADIIYPGHGPVIHNAEAK 18 Unmodified _ADIIYPGHGPVIHNAEAK_ 0 0 0 Q53H82 Q53H82 Q53H82 LACTB2 Beta-lactamase-like protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 476.252166748047 4 476.252163 1900.97955 -0.095455 -4.5461E-05 0.092681 4.414E-05 -0.0027743 -1.3213E-06 476.502970568334 37.479 0.7834 37.479 37.111 37.894 0 35 15 3 0 0 0 0.0020518 1 31958 30.945 24.054 1 12752000 499 2304 468 469 576 576 ADIIYPGHGPVIHNAEAK 18 Unmodified _ADIIYPGHGPVIHNAEAK_ 0 0 0 Q53H82 Q53H82 Q53H82 LACTB2 Beta-lactamase-like protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 635.001708984375 3 634.667125 1900.97955 0.30565 0.00019398 0.27999 0.0001777 0.58563 0.00037168 635.001423388046 37.453 0.48592 37.453 37.21 37.696 0 17 9 2 0 0 0 0.029418 1 32048 18.058 14.225 1 5435900 500 2304 468 469 577 577 ADILEDK 7 Unmodified _ADILEDK_ 0 0 0 P52272 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 210214_Eclipse_Hela_QC 402.210876464844 2 402.210901 802.407249 -0.63032 -0.00025352 0.3156 0.00012694 -0.31472 -0.00012659 402.210920055446 26.186 0.54798 26.186 25.959 26.507 0 22 10 3 0 0 0 0.0088262 1 15908 82.305 37.774 1 53394000 501 1464 469 470 578 578 ADILQVGLR 9 Unmodified _ADILQVGLR_ 0 0 0 Q9H074 Q9H074 Q9H074 PAIP1 Polyadenylate-binding protein-interacting protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 492.795989990234 2 492.795466 983.57638 0.36829 0.00018149 0.16522 8.142E-05 0.53351 0.00026291 492.795499548325 64.028 0.73636 64.028 63.623 64.359 0 42 14 4 0 0 0 0.026794 1 69281 45.68 19.078 1 17041000 502 3402 470 471 579 579 ADKPDMGEIASFDK 14 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))ADKPDM(Oxidation (M))GEIASFDK_ ADKPDM(1)GEIASFDK ADKPDM(86)GEIASFDK 1 1 1 P63313 P63313 P63313 TMSB10 Thymosin beta-10 MULTI-MSMS 210214_Eclipse_Hela_QC 791.359497070312 2 791.358696 1580.70284 1.4899 0.0011791 -0.006147 -4.8645E-06 1.4838 0.0011742 791.86007027838 50.951 0.6715 50.951 50.578 51.249 0 47 13 4 0 0 0 0.00012666 2 50984 85.845 81.149 1 42751000 503 1721 471 472 580;581 580 444 ADKPDMGEIASFDK 14 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))ADKPDM(Oxidation (M))GEIASFDK_ ADKPDM(1)GEIASFDK ADKPDM(110)GEIASFDK 1 1 1 P63313 P63313 P63313 TMSB10 Thymosin beta-10 MULTI-MSMS 210214_Eclipse_Hela_QC 791.36328125 2 791.358696 1580.70284 1.1679 0.00092423 -0.32338 -0.00025591 0.84452 0.00066832 791.358597813473 69.43 0.89569 69.43 69.029 69.924 0 54 17 4 0 0 0 2.3522E-06 2 77038 107.65 94.054 1 45006000 504 1721 471 472 582;583 583 444 ADKPDMGEIASFDK 14 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADKPDMGEIASFDK_ 1 0 1 P63313 P63313 P63313 TMSB10 Thymosin beta-10 MULTI-MSMS 210214_Eclipse_Hela_QC 783.361267089844 2 783.361238 1564.70792 1.1302 0.00088539 -0.89877 -0.00070406 0.23148 0.00018133 783.360659775181 69.452 1.7389 69.452 68.981 70.72 0 122 34 6 0 0 0 1.5431E-11 2 77591 134.04 110.72 1 933520000 505 1721 471 473 584;585 585 ADLAAVEAK 9 Unmodified _ADLAAVEAK_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 210214_Eclipse_Hela_QC 444.245391845703 2 444.245275 886.475997 -0.11886 -5.2801E-05 -1.2351 -0.00054869 -1.354 -0.00060149 444.245139032591 27.03 0.6964 27.03 26.657 27.353 0 22 13 2 0 0 0 0.0010411 1 17118 84.615 47.056 1 20982000 506 2070 472 474 586 586 ADLAEEYSK 9 Unmodified _ADLAEEYSK_ 0 0 0 P68036 P68036 P68036 UBE2L3 Ubiquitin-conjugating enzyme E2 L3 MULTI-MSMS 210214_Eclipse_Hela_QC 513.242797851562 2 513.242929 1024.47131 0.20809 0.0001068 -1.0071 -0.0005169 -0.79904 -0.0004101 513.242356940336 27.914 0.68699 27.914 27.651 28.338 0 37 13 4 0 0 0 4.6394E-05 1 18269 122.19 96.016 1 56450000 507 1728 473 475 587 587 ADLDVSGPK 9 Unmodified _ADLDVSGPK_ 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 210214_Eclipse_Hela_QC 451.234619140625 2 451.234907 900.455261 -0.14099 -6.3619E-05 0.95313 0.00043009 0.81214 0.00036647 451.235415214901 26.433 0.39862 26.433 26.158 26.557 0 13 7 2 0 0 0 0.00025634 1 16181 110.22 0 1 118670000 508 1896 474 476 588 588 ADLEEQLSDEEK 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADLEEQLSDEEK_ 1 0 0 P47755 P47755 P47755 CAPZA2 F-actin-capping protein subunit alpha-2 MULTI-MSMS 210214_Eclipse_Hela_QC 724.827819824219 2 724.325376 1446.6362 1.0634 0.00077024 0.38064 0.00027571 1.444 0.0010459 724.325513605456 78.359 0.54716 78.359 78.12 78.667 0 23 10 3 0 0 0 0.00052007 1 89618 64.82 53.792 1 4865900 509 1328 475 477 589 589 ADLEMQIENLK 11 Oxidation (M) _ADLEM(Oxidation (M))QIENLK_ ADLEM(1)QIENLK ADLEM(81)QIENLK 0 1 0 CON__Q04695;Q04695 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 MULTI-MSMS 210214_Eclipse_Hela_QC 660.329406738281 2 660.32921 1318.64387 0.33357 0.00022026 0.08902 5.8782E-05 0.42259 0.00027905 660.329341426008 66.274 0.74654 66.274 65.702 66.448 0 28 14 2 0 0 0 0.0012638 1 72175 80.688 59.225 1 15040000 + 510 75 476 478 590 590 29 ADLEMQIENLK 11 Oxidation (M) _ADLEM(Oxidation (M))QIENLK_ ADLEM(1)QIENLK ADLEM(88)QIENLK 0 1 0 CON__Q04695;Q04695 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 MULTI-SECPEP 210214_Eclipse_Hela_QC 660.848754882812 2 660.32921 1318.64387 1.1608 0.00076648 -0.75375 -0.00049773 0.40701 0.00026876 660.328700973825 70.772 1.0448 70.772 70.123 71.168 0 43 20 3 0 0 0 0.0043848 1 79220 88.392 72.427 1 35489000 + 511 75 476 478 591 591 29 ADLEMQIENLK 11 Unmodified _ADLEMQIENLK_ 0 0 0 CON__Q04695;Q04695 CON__Q04695 CON__Q04695 KRT17 Keratin, type I cytoskeletal 17 MULTI-MSMS 210214_Eclipse_Hela_QC 652.331909179688 2 652.331753 1302.64895 1.0892 0.0007105 -1.0231 -0.00066739 0.066083 4.3108E-05 652.331511812748 70.752 1.5929 70.752 70.373 71.965 0 91 31 5 0 0 0 8.0341E-11 3 78724 142.43 93.631 1 721710000 + 512 75 476 479 592;593;594 593 ADLEMQIESLTEELAYLK 18 Unmodified _ADLEMQIESLTEELAYLK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 MULTI-MSMS 210214_Eclipse_Hela_QC 1048.5283203125 2 1048.52702 2095.03949 1.8233 0.0019118 0.92169 0.00096642 2.745 0.0028782 1049.02964788243 110.62 0.34953 110.62 110.4 110.75 0 18 6 5 0 0 0 5.4133E-08 1 134286 109 94.121 1 11579000 + 513 63 477 480 595 595 ADLFPILMR 9 Unmodified _ADLFPILMR_ 0 0 0 O75691 O75691 O75691 UTP20 Small subunit processome component 20 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 538.302917480469 2 538.30207 1074.58959 1.0048 0.00054089 -0.61046 -0.00032861 0.39435 0.00021228 538.301761133971 97.082 0.647 97.082 96.77 97.417 0 28 12 3 0 0 0 0.025157 1 115460 46.426 46.426 1 2483900 514 476 478 481 596 596 ADLHDEEDEQDILLAQDLEDMWEQK 25 Unmodified _ADLHDEEDEQDILLAQDLEDMWEQK_ 0 0 0 Q9H2W6 Q9H2W6 Q9H2W6 MRPL46 39S ribosomal protein L46, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1010.78704833984 3 1010.11699 3027.32914 1.4331 0.0014476 -0.20044 -0.00020246 1.2327 0.0012452 1010.45063674197 107.73 0.24961 107.73 107.61 107.86 0 17 4 6 0 0 0 8.2957E-07 2 130300 69.639 68.677 1 13635000 515 3449 479 482 597;598 597 ADLIAYLK 8 Unmodified _ADLIAYLK_ 0 0 0 P99999 P99999 P99999 CYCS Cytochrome c MULTI-MSMS 210214_Eclipse_Hela_QC 453.768707275391 2 453.768386 905.522219 0.36776 0.00016688 0.17758 8.0582E-05 0.54534 0.00024746 453.768414095055 72.447 0.89591 72.447 71.965 72.861 0 54 17 5 0 0 0 0.0053753 1 81004 79.469 32.387 1 44954000 516 1792 480 483 599 599 ADLINNLGTIAK 12 Unmodified _ADLINNLGTIAK_ 0 0 0 P07900;Q14568;P08238;Q58FF8 P07900;P08238;Q58FF8 P08238 HSP90AA1;HSP90AA2P;HSP90AB1;HSP90AB2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 MULTI-MSMS 210214_Eclipse_Hela_QC 621.859375 2 621.856252 1241.69795 0.60844 0.00037836 -0.70244 -0.00043682 -0.093995 -5.8452E-05 621.856178034283 70.447 0.89553 70.447 70.024 70.919 0 90 17 7 0 0 0 7.8262E-06 2 78224 111.86 62.14 1 1434000000 517 745;730;2313 481 484 600;601 600 ADLLLSTQPGR 11 Unmodified _ADLLLSTQPGR_ 0 0 0 P08195 P08195 P08195 SLC3A2 4F2 cell-surface antigen heavy chain MULTI-MSMS 210214_Eclipse_Hela_QC 585.828002929688 2 585.827495 1169.64044 0.51684 0.00030278 -0.017787 -1.042E-05 0.49905 0.00029236 585.827524849683 52.143 0.79646 52.143 51.847 52.643 0 54 15 5 0 0 0 0.0026351 1 52646 61.161 31.418 1 53455000 518 742 482 485 602 602 ADLLLSTQPGREEGSPLELER 21 Unmodified _ADLLLSTQPGREEGSPLELER_ 0 0 1 P08195 P08195 P08195 SLC3A2 4F2 cell-surface antigen heavy chain MULTI-MSMS 210214_Eclipse_Hela_QC 771.071228027344 3 770.736044 2309.1863 0.88824 0.0006846 0.0052039 4.0108E-06 0.89344 0.00068861 771.070343784462 75.278 1.1263 75.278 74.953 76.079 0 35 22 2 0 0 0 5.6329E-63 1 85163 177.4 157.31 1 152910000 519 742 483 486 603 603 ADLQNHLDTAQNALQDK 17 Unmodified _ADLQNHLDTAQNALQDK_ 0 0 0 Q15075 Q15075 Q15075 EEA1 Early endosome antigen 1 MULTI-MSMS 210214_Eclipse_Hela_QC 632.982604980469 3 632.313299 1893.91807 0.74672 0.00047216 0.4141 0.00026184 1.1608 0.000734 632.647867454833 44.562 0.44677 44.562 44.29 44.736 0 21 8 3 0 0 0 4.7207E-05 1 42055 79.013 67.969 1 13790000 520 2152 484 487 604 604 ADLSGITK 8 Unmodified _ADLSGITK_ 0 0 0 CON__P34955 CON__P34955 CON__P34955 MULTI-MSMS 210214_Eclipse_Hela_QC 402.726654052734 2 402.726718 803.438883 -0.62221 -0.00025058 -0.65009 -0.00026181 -1.2723 -0.00051239 402.7266972193 27.262 1.4819 27.262 26.955 28.437 0 96 29 5 0 0 0 0.0014693 1 17391 110.81 58.124 1 685890000 + 521 69 485 488 605 605 ADLTALFLPR 10 Unmodified _ADLTALFLPR_ 0 0 0 Q13045 Q13045 Q13045 FLII Protein flightless-1 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 558.824035644531 2 558.824224 1115.63389 1.0803 0.00060371 -0.53653 -0.00029983 0.5438 0.00030389 558.823991691283 99.844 0.89471 99.844 99.456 100.35 0 54 17 5 0 0 0 0.00055191 1 119178 85.064 75.077 1 5914300 522 1938 486 489 606 606 ADLTEYLSTHYK 12 Unmodified _ADLTEYLSTHYK_ 0 0 0 P31930 P31930 P31930 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 720.853942871094 2 720.853906 1439.69326 -0.19768 -0.0001425 0.60344 0.00043499 0.40576 0.0002925 720.85418752677 62.075 0.68851 62.075 61.741 62.429 0 31 13 3 0 0 0 2.9623E-11 1 66648 134.68 108.16 1 40299000 523 1146 487 490 607 607 ADLTEYLSTHYK 12 Unmodified _ADLTEYLSTHYK_ 0 0 0 P31930 P31930 P31930 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 480.904327392578 3 480.90503 1439.69326 -0.63967 -0.00030762 -0.0032554 -1.5655E-06 -0.64293 -0.00030919 480.904934366333 62.085 0.68851 62.085 61.741 62.429 0 32 13 3 0 0 0 0.009404 2 66705 32.734 27.736 1 15070000 524 1146 487 490 608;609 609 ADLVIVGAEGVVENGGIINK 20 Unmodified _ADLVIVGAEGVVENGGIINK_ 0 0 0 Q14232 Q14232 Q14232 EIF2B1 Translation initiation factor eIF-2B subunit alpha MULTI-MSMS 210214_Eclipse_Hela_QC 984.546203613281 2 984.044029 1966.07351 1.0209 0.0010046 0.46346 0.00045606 1.4843 0.0014606 984.044346256636 95.71 0.60432 95.71 95.372 95.977 0 26 12 3 0 0 0 5.601E-05 1 113511 67.964 54 1 11819000 525 2071 488 491 610 610 ADLYLEGK 8 Unmodified _ADLYLEGK_ 0 0 0 Q9NSE4 Q9NSE4 Q9NSE4 IARS2 Isoleucine--tRNA ligase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 454.740234375 2 454.739825 907.465098 0.087196 3.9652E-05 1.0753 0.00048896 1.1624 0.00052861 454.740003211886 35.515 0.74105 35.515 35.045 35.786 0 33 14 3 0 0 0 0.028444 1 29231 49.96 31.636 1 10294000 526 3642 489 492 611 611 ADMGGAATICSAIVSAAK 18 Unmodified _ADMGGAATICSAIVSAAK_ 0 0 0 P28838 P28838 P28838 LAP3 Cytosol aminopeptidase MULTI-MSMS 210214_Eclipse_Hela_QC 847.918029785156 2 847.416022 1692.81749 1.613 0.0013669 0.51256 0.00043435 2.1256 0.0018013 847.416333286761 81.377 0.64648 81.377 80.904 81.551 0 27 12 3 0 0 0 0.033975 1 93683 42.209 35.676 1 6209100 527 1094 490 493 612 612 ADNDAGNAAIDSLLNYETVK 20 Unmodified _ADNDAGNAAIDSLLNYETVK_ 0 0 0 O75027 O75027 O75027 ABCB7 ATP-binding cassette sub-family B member 7, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1048.00695800781 2 1047.50292 2092.99129 1.2677 0.0013279 0.36635 0.00038375 1.634 0.0017116 1048.00463993268 97.06 0.4976 97.06 96.77 97.268 0 30 9 4 0 0 0 0.039484 1 115440 28.956 19.668 1 6391900 528 415 491 494 613 613 ADNFEYSDPVDGSISR 16 Unmodified _ADNFEYSDPVDGSISR_ 0 0 0 P36871 P36871 P36871 PGM1 Phosphoglucomutase-1 MULTI-MSMS 210214_Eclipse_Hela_QC 886.392822265625 2 886.392113 1770.76967 1.4132 0.0012526 -0.10064 -8.9204E-05 1.3125 0.0011634 886.893451737065 63.718 0.69704 63.718 63.424 64.121 0 49 13 5 0 0 0 1.6969E-06 1 69002 101.53 94.999 1 28222000 529 1211 492 495 614 614 ADNIEVFAQGHGIIQVDK 18 Unmodified _ADNIEVFAQGHGIIQVDK_ 0 0 0 P29144 P29144 P29144 TPP2 Tripeptidyl-peptidase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 652.005432128906 3 652.005806 1952.99559 0.74947 0.00048866 0.24788 0.00016162 0.99735 0.00065028 652.005757723591 71.463 0.69785 71.463 71.168 71.866 0 32 13 4 0 0 0 0.0017816 1 79910 41.513 37.545 1 5130000 530 1097 493 496 615 615 ADNLVNLK 8 Unmodified _ADNLVNLK_ 0 0 0 P17301 P17301 P17301 ITGA2 Integrin alpha-2 MSMS 210214_Eclipse_Hela_QC 443.753387451172 2 443.753267 885.491981 NaN NaN NaN NaN NaN NaN NaN 34.929 1 34.929 34.429 35.429 0 0 0 0 0.0029808 1 28444 104.45 30.032 1 531 932 494 497 616 616 ADPAFGLESSGIAGTTSDEPERIEESGNDEAR 32 Unmodified _ADPAFGLESSGIAGTTSDEPERIEESGNDEAR_ 0 0 1 Q8TAQ2 Q8TAQ2 Q8TAQ2 SMARCC2 SWI/SNF complex subunit SMARCC2 MULTI-MSMS 210214_Eclipse_Hela_QC 1103.837890625 3 1103.16595 3306.47602 0.28413 0.00031345 0.45666 0.00050377 0.74079 0.00081722 1103.50115818539 74.941 0.7479 74.941 74.654 75.402 0 36 14 4 0 0 0 0.028592 1 84817 27.468 21.748 1 14148000 532 2786 495 498 617 617 ADPDGPEAQAEACSGER 17 Unmodified _ADPDGPEAQAEACSGER_ 0 0 0 Q9NX24 Q9NX24 Q9NX24 NHP2 H/ACA ribonucleoprotein complex subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 880.363830566406 2 880.363029 1758.71151 0.70844 0.00062369 -0.051837 -4.5636E-05 0.65661 0.00057805 880.363170090905 26.679 0.6472 26.679 26.358 27.005 0 43 12 5 0 0 0 4.4688E-06 1 16498 100.22 95.882 1 19510000 533 3717 496 499 618 618 ADPEAAWEPTEAEAR 15 Unmodified _ADPEAAWEPTEAEAR_ 0 0 0 Q9UBT2 Q9UBT2 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 821.871276855469 2 821.870816 1641.72708 1.2604 0.0010359 0.65196 0.00053583 1.9124 0.0015717 821.871074695918 54.498 0.68792 54.498 54.285 54.973 0 43 13 4 0 0 0 0.00051851 1 56086 81.625 78.892 1 16963000 534 3830 497 500 619 619 ADPECMLGHLLR 12 Unmodified _ADPECMLGHLLR_ 0 0 0 Q9Y4B6 Q9Y4B6 Q9Y4B6 VPRBP Protein VPRBP MULTI-MSMS 210214_Eclipse_Hela_QC 471.232360839844 3 471.232206 1410.67479 0.65175 0.00030712 -0.33078 -0.00015587 0.32097 0.00015125 471.232218459494 74.116 0.49787 74.116 73.907 74.405 0 20 9 3 0 0 0 0.010719 1 83755 28.283 20.307 1 1201400 535 4085 498 501 620 620 ADPEVCCFITK 11 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADPEVCCFITK_ 1 0 0 Q7Z2W4 Q7Z2W4 Q7Z2W4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 691.812377929688 2 691.309963 1380.60537 0.85675 0.00059228 -0.48138 -0.00033278 0.37537 0.0002595 691.309955399511 85.506 0.64555 85.506 85.147 85.792 0 27 12 4 0 0 0 0.0017884 1 99576 55.567 43.719 1 2756100 536 2533 499 502 621 621 ADPFSFEGPEIVDCDGCTIDWK 22 Unmodified _ADPFSFEGPEIVDCDGCTIDWK_ 0 0 0 Q99733 Q99733 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 MULTI-MSMS 210214_Eclipse_Hela_QC 1280.04919433594 2 1279.54615 2557.07774 1.4262 0.0018249 -0.28202 -0.00036086 1.1442 0.0014641 1280.04730641017 106.2 0.34841 106.2 106.07 106.42 0 25 6 6 0 0 0 1.4895E-63 1 128170 199.33 194.52 1 102710000 537 3190 500 503 622 622 ADPNHLVDDLLTPCSPGDPGAIEMTWMDVPGDK 33 Unmodified _ADPNHLVDDLLTPCSPGDPGAIEMTWMDVPGDK_ 0 0 0 O75351 O75351 O75351 VPS4B Vacuolar protein sorting-associated protein 4B MULTI-MSMS 210214_Eclipse_Hela_QC 1188.96081542969 3 1188.54243 3562.60546 1.4887 0.0017694 0.066031 7.848E-05 1.5547 0.0018479 1188.87662319465 107.83 0.24972 107.83 107.66 107.91 0 18 4 6 0 0 0 4.2368E-07 1 130375 58.21 56.23 1 17423000 538 441 501 504 623 623 ADPQEAINCLMR 12 Unmodified _ADPQEAINCLMR_ 0 0 0 P54920 P54920 P54920 NAPA Alpha-soluble NSF attachment protein MULTI-MSMS 210214_Eclipse_Hela_QC 709.833312988281 2 709.331761 1416.64897 1.0785 0.000765 0.41957 0.00029761 1.4981 0.0010626 709.833446985116 71.873 0.79591 71.873 71.617 72.413 0 35 15 3 0 0 0 0.050713 1 80654 33.19 6.6761 1 5442100 539 1524 502 505 624 624 ADPSHFELLK 10 Unmodified _ADPSHFELLK_ 0 0 0 Q15418 Q15418 Q15418 RPS6KA1 Ribosomal protein S6 kinase alpha-1 MULTI-MSMS 210214_Eclipse_Hela_QC 579.305114746094 2 578.803488 1155.59242 0.51423 0.00029764 -0.0057392 -3.3219E-06 0.50849 0.00029431 578.803386875023 46.617 0.59703 46.617 46.329 46.926 0 22 11 3 0 0 0 0.00090361 1 45073 73.233 38.98 1 6980700 540 2183 503 506 625 625 ADPSLNPEQLK 11 Unmodified _ADPSLNPEQLK_ 0 0 0 Q9UNF0 Q9UNF0 Q9UNF0 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 606.317626953125 2 606.31696 1210.61937 0.60642 0.00036768 0.63517 0.00038511 1.2416 0.0007528 606.317421719346 44.587 0.84498 44.587 44.041 44.886 0 36 16 3 0 0 0 0.0037596 1 42151 55.649 32.909 1 12994000 541 3953 504 507 626 626 ADPSQFELLK 10 Unmodified _ADPSQFELLK_ 0 0 0 P51812;Q15349 P51812 P51812 RPS6KA3;RPS6KA2 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-2 MULTI-MSMS 210214_Eclipse_Hela_QC 574.804931640625 2 574.303321 1146.59209 0.18112 0.00010402 0.18771 0.0001078 0.36883 0.00021182 574.30334977346 66.029 0.99538 66.029 65.702 66.697 0 52 19 4 0 0 0 0.0050026 1 72383 58.433 29.488 1 13189000 542 1457 505 508 627 627 ADQDRLDLEER 11 Unmodified _ADQDRLDLEER_ 0 0 1 Q14683 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 453.888061523438 3 453.88815 1358.64262 0.23528 0.00010679 -0.29682 -0.00013472 -0.061539 -2.7932E-05 453.887775787214 28.805 0.4275 28.805 28.604 29.032 0 17 8 3 0 0 0 0.0046476 1 19679 56.951 42.075 1 7085900 543 2100 506 509 628 628 ADQELMTYSHDNIICGITSVSFSK 24 Unmodified _ADQELMTYSHDNIICGITSVSFSK_ 0 0 0 P62873 P62873 P62873 GNB1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 MULTI-MSMS 210214_Eclipse_Hela_QC 906.427429199219 3 906.091282 2715.25202 2.0296 0.001839 -0.15348 -0.00013907 1.8761 0.0016999 906.42563340588 94.119 1.0886 94.119 93.588 94.676 0 83 21 6 0 0 0 2.0796E-07 1 111454 82.177 79.454 1 27683000 544 1687 507 510 629 629 ADQFEYVMYGK 11 Unmodified _ADQFEYVMYGK_ 0 0 0 P52434 P52434 P52434 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 MULTI-MSMS 210214_Eclipse_Hela_QC 675.807373046875 2 675.805371 1349.59619 1.6244 0.0010978 0.23637 0.00015974 1.8608 0.0012575 675.80572251969 65.533 0.74705 65.533 65.104 65.851 0 41 14 4 0 0 0 0.0015595 1 71544 66.435 61.451 1 16386000 545 1469 508 511 630 630 ADQFLVGTSR 10 Unmodified _ADQFLVGTSR_ 0 0 0 Q9HC35 Q9HC35 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 MULTI-MSMS 210214_Eclipse_Hela_QC 547.787414550781 2 547.285463 1092.55637 0.63247 0.00034614 -0.026636 -1.4577E-05 0.60584 0.00033157 547.285762367515 41.615 1.1903 41.615 40.86 42.05 0 50 23 4 0 0 0 0.012381 1 38146 50.297 26.267 1 6299800 546 3553 509 512 631 631 ADQIETQQLMR 11 Unmodified _ADQIETQQLMR_ 0 0 0 Q9H4M9;Q9NZN3 Q9H4M9 Q9H4M9 EHD1;EHD3 EH domain-containing protein 1;EH domain-containing protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 666.833129882812 2 666.832451 1331.65035 0.9197 0.00061329 -0.21339 -0.0001423 0.70631 0.00047099 666.83247904301 43.951 0.7462 43.951 43.494 44.24 0 32 14 4 0 0 0 1.2317E-05 2 41254 113.71 93.377 1 16117000 547 3473 510 513 632;633 633 ADQLTEEQIAEFK 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADQLTEEQIAEFK_ 1 0 0 P0DP25;P0DP24;P0DP23 P0DP25 P0DP25 MULTI-MSMS 210214_Eclipse_Hela_QC 782.882873535156 2 782.380485 1562.74642 2.0391 0.0015954 -0.45961 -0.00035959 1.5795 0.0012358 782.380159348966 93.612 1.4911 93.612 92.991 94.483 0 118 29 6 0 0 0 5.8857E-39 2 110482 214.26 206.33 1 340460000 548 795 511 514 634;635 634 ADQLYLENIDEFVTDQNK 18 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADQLYLENIDEFVTDQNK_ 1 0 0 Q15054 Q15054 Q15054 POLD3 DNA polymerase delta subunit 3 MULTI-MSMS 210214_Eclipse_Hela_QC 1099.52026367188 2 1099.01841 2196.02226 1.3475 0.001481 -0.17315 -0.0001903 1.1744 0.0012907 1099.52002993132 110.08 0.44914 110.08 109.8 110.25 0 29 8 6 0 0 0 2.7949E-12 1 133580 120.53 112.22 1 17929000 549 2144 512 515 636 636 ADQQYECVAEIGEGAYGK 18 Unmodified _ADQQYECVAEIGEGAYGK_ 0 0 0 Q00534 Q00534 Q00534 CDK6 Cyclin-dependent kinase 6 MULTI-MSMS 210214_Eclipse_Hela_QC 994.940551757812 2 994.438737 1986.86292 1.7504 0.0017407 0.31508 0.00031333 2.0655 0.002054 994.939913593724 65.478 0.29817 65.478 65.354 65.652 0 8 5 2 0 0 0 0.02654 1 71724 42.556 37.477 1 2459100 550 1798 513 516 637 637 ADQVCINLR 9 Unmodified _ADQVCINLR_ 0 0 0 Q12805 Q12805 Q12805 EFEMP1 EGF-containing fibulin-like extracellular matrix protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 544.781005859375 2 544.77949 1087.54443 0.89284 0.0004864 0.75444 0.000411 1.6473 0.00089741 544.780070417911 43.817 0.54732 43.817 43.543 44.091 0 31 10 4 0 0 0 0.0066883 2 41029 60.895 24.339 1 13844000 551 1913 514 517 638;639 638 ADRDESSPYAAMLAAQDVAQR 21 Oxidation (M) _ADRDESSPYAAM(Oxidation (M))LAAQDVAQR_ ADRDESSPYAAM(1)LAAQDVAQR ADRDESSPYAAM(48)LAAQDVAQR 0 1 1 P62263 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 210214_Eclipse_Hela_QC 761.022888183594 3 761.021967 2280.04407 1.1321 0.00086155 0.0050364 3.8328E-06 1.1371 0.00086538 761.356375404351 52.702 0.44835 52.702 52.444 52.892 0 33 8 5 0 0 0 0.00092733 1 53521 48.229 39.52 1 12530000 552 1650 515 518 640 640 409 ADRDESSPYAAMLAAQDVAQR 21 Oxidation (M) _ADRDESSPYAAM(Oxidation (M))LAAQDVAQR_ ADRDESSPYAAM(1)LAAQDVAQR ADRDESSPYAAM(89)LAAQDVAQR 0 1 1 P62263 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 210214_Eclipse_Hela_QC 761.357055664062 3 761.021967 2280.04407 1.1577 0.00088107 -0.82874 -0.00063069 0.329 0.00025038 761.02152833317 71.938 0.7462 71.938 71.567 72.314 0 49 14 5 0 0 0 6.897E-07 1 80525 88.951 84.513 1 15008000 553 1650 515 518 641 641 409 ADRDESSPYAAMLAAQDVAQR 21 Unmodified _ADRDESSPYAAMLAAQDVAQR_ 0 0 1 P62263 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 210214_Eclipse_Hela_QC 756.025146484375 3 755.690329 2264.04916 1.1219 0.00084778 -0.41276 -0.00031192 0.7091 0.00053586 756.024366737031 71.94 1.344 71.94 71.468 72.812 0 123 26 7 0 0 0 4.8285E-38 2 80371 171.13 161.87 1 524630000 554 1650 515 519 642;643 642 ADRDESSPYAAMLAAQDVAQR 21 Unmodified _ADRDESSPYAAMLAAQDVAQR_ 0 0 1 P62263 P62263 P62263 RPS14 40S ribosomal protein S14 MULTI-MSMS 210214_Eclipse_Hela_QC 1133.53479003906 2 1133.03186 2264.04916 0.68896 0.00078062 -0.052298 -5.9255E-05 0.63667 0.00072136 1133.533388555 71.94 0.5968 71.94 71.617 72.214 0 34 11 4 0 0 0 5.135E-19 1 80547 162.59 150.98 1 9281400 555 1650 515 519 644 644 ADSAVSQEQLR 11 Unmodified _ADSAVSQEQLR_ 0 0 0 Q9UKS6 Q9UKS6 Q9UKS6 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 602.302612304688 2 602.301841 1202.58913 0.68703 0.0004138 0.40644 0.0002448 1.0935 0.0006586 602.302019393136 23.671 0.34944 23.671 23.401 23.75 0 15 6 3 0 0 0 1.5814E-23 1 12323 196.88 159.41 1 26548000 556 3916 516 520 645 645 ADSCQLDYSQGPCLGLFK 18 Unmodified _ADSCQLDYSQGPCLGLFK_ 0 0 0 CON__P00978 CON__P00978 CON__P00978 MULTI-MSMS 210214_Eclipse_Hela_QC 1029.96789550781 2 1029.96661 2057.91866 1.3444 0.0013847 -0.25207 -0.00025963 1.0924 0.0011251 1030.46811705583 87.458 0.84532 87.458 87.085 87.93 0 72 16 6 0 0 0 5.0416E-05 1 101954 97.121 84.761 1 50305000 + 557 46 517 521 646 646 ADSELQLVEQR 11 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADSELQLVEQR_ 1 0 0 P07741 P07741 P07741 APRT Adenine phosphoribosyltransferase MULTI-MSMS 210214_Eclipse_Hela_QC 665.839172363281 2 665.335881 1328.65721 1.4136 0.0009405 -0.20885 -0.00013896 1.2047 0.00080154 665.335695911443 81.326 0.79507 81.326 80.904 81.699 0 41 15 4 0 0 0 0.0018769 1 93475 67.704 25.356 1 34442000 558 727 518 522 647 647 ADSELQLVEQR 11 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADSELQLVEQR_ 1 0 0 P07741 P07741 P07741 APRT Adenine phosphoribosyltransferase MULTI-SECPEP 210214_Eclipse_Hela_QC 1329.56860351562 1 1329.66449 1328.65721 2.2934 0.0030495 -0.25812 -0.00034321 2.0353 0.0027063 1329.66437070976 81.29 0.44757 81.29 81.054 81.501 0 18 8 3 0 0 0 0.0029998 1 93566 92.062 64.32 1 3554100 559 727 518 522 648 648 ADSGTAGGAALAAPAPGPGSGGPGPR 26 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADSGTAGGAALAAPAPGPGSGGPGPR_ 1 0 0 Q96C90 Q96C90 Q96C90 PPP1R14B Protein phosphatase 1 regulatory subunit 14B MULTI-MSMS 210214_Eclipse_Hela_QC 1080.52795410156 2 1080.02743 2158.04031 -0.063668 -6.8763E-05 -0.54649 -0.00059023 -0.61016 -0.00065899 1080.02661363155 67.138 0.51677 67.138 66.846 67.363 0 23 10 3 0 0 0 2.1874E-34 1 73867 156.17 136.33 1 10444000 560 2988 519 523 649 649 ADSLLAVVK 9 Unmodified _ADSLLAVVK_ 0 0 0 Q14151;Q15424 Q14151;Q15424 Q15424 SAFB2;SAFB Scaffold attachment factor B2;Scaffold attachment factor B1 MULTI-MSMS 210214_Eclipse_Hela_QC 458.279632568359 2 458.279118 914.543683 0.28407 0.00013018 0.96104 0.00044043 1.2451 0.00057061 458.279149822626 58.512 1.0954 58.512 58.159 59.254 0 50 21 4 0 0 0 0.031064 1 61622 43.734 20.715 1 25216000 561 2184;2058 520 524 650 650 ADSLLEDITDIPK 13 Unmodified _ADSLLEDITDIPK_ 0 0 0 Q9BQL6 Q9BQL6 Q9BQL6 FERMT1 Fermitin family homolog 1 MULTI-SECPEP 210214_Eclipse_Hela_QC 716.028869628906 2 715.374672 1428.73479 1.2217 0.00087395 0.31567 0.00022582 1.5373 0.0010998 715.374857954916 98.791 0.64682 98.791 98.461 99.108 0 22 12 2 0 0 0 0.014044 1 117868 72.006 61.774 1 4479400 562 3228 521 525 651 651 ADSRDPASDQMQHWK 15 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADSRDPASDQMQHWK_ 1 0 1 P04040 P04040 P04040 CAT Catalase MULTI-MSMS 210214_Eclipse_Hela_QC 605.269409179688 3 605.268925 1812.78495 0.44092 0.00026688 -0.32221 -0.00019502 0.11871 7.1853E-05 605.268980788287 37.072 0.6803 37.072 36.766 37.447 0 46 13 4 0 0 0 4.2523E-05 1 31421 72.662 67.197 1 16140000 563 653 522 526 652 652 ADTEEEFLAFR 11 Unmodified _ADTEEEFLAFR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 210214_Eclipse_Hela_QC 664.3125 2 664.311874 1326.6092 0.63603 0.00042252 0.48761 0.00032392 1.1236 0.00074644 664.311951376811 76.851 0.79685 76.851 76.378 77.175 0 32 15 3 0 0 0 0.018276 1 87321 44.309 36.384 1 11189000 564 1300 523 527 653 653 ADTGLFSR 8 Unmodified _ADTGLFSR_ 0 0 0 Q14134 Q14134 Q14134 TRIM29 Tripartite motif-containing protein 29 MULTI-MSMS 210214_Eclipse_Hela_QC 433.721588134766 2 433.721967 865.429381 0.20424 8.8584E-05 -0.052633 -2.2828E-05 0.15161 6.5756E-05 433.721993076356 34.427 0.69486 34.427 33.966 34.661 0 27 14 3 0 0 0 0.0034458 1 27699 87.251 40.449 1 10031000 565 2053 524 528 654 654 ADTLDPALLRPGR 13 Unmodified _ADTLDPALLRPGR_ 0 0 1 P43686 P43686 P43686 PSMC4 26S protease regulatory subunit 6B MULTI-MSMS 210214_Eclipse_Hela_QC 465.597839355469 3 465.596531 1393.76776 0.87545 0.00040761 0.39688 0.00018479 1.2723 0.00059239 465.596733755153 54.282 0.88511 54.282 53.989 54.874 0 47 17 4 0 0 0 0.00030443 1 55695 69.03 62.754 1 24149000 566 1294 525 529 655 655 ADTLGELDLER 11 Unmodified _ADTLGELDLER_ 0 0 0 Q86TX2;P49753 Q86TX2 Q86TX2 ACOT1;ACOT2 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 616.312133789062 2 616.311874 1230.6092 0.47722 0.00029412 -0.28992 -0.00017868 0.1873 0.00011544 616.311700638907 65.178 0.54815 65.178 64.855 65.403 0 18 10 2 0 0 0 0.0012961 1 71134 67.726 47.396 1 7002600 567 2572 526 530 656 656 ADTLIGEK 8 Unmodified _ADTLIGEK_ 0 0 0 REV__Q8WZ42 REV__Q8WZ42 MULTI-MSMS 210214_Eclipse_Hela_QC 423.731811523438 2 423.732 845.449448 -0.17049 -7.2244E-05 0.0054688 2.3173E-06 -0.16503 -6.9927E-05 423.731978640708 26.048 0.4474 26.048 25.761 26.208 0 21 8 3 0 0 0 0.002803 1 15685 97.602 31.93 1 34878000 + 568 4196 527 531 657 657 ADTLTLEER 9 Unmodified _ADTLTLEER_ 0 0 0 Q9UHD8 Q9UHD8 Q9UHD8 SEPT9 Septin-9 MULTI-MSMS 210214_Eclipse_Hela_QC 524.269409179688 2 524.269478 1046.5244 -0.2207 -0.00011571 -0.79408 -0.00041631 -1.0148 -0.00053202 524.268981730722 36.068 0.78493 36.068 35.786 36.571 0 30 15 2 0 0 0 6.7334E-06 1 30049 140.5 76.936 1 27293000 569 3863 528 532 658 658 ADTLTLK 7 Unmodified _ADTLTLK_ 0 0 0 Q15019 Q15019 Q15019 SEPT2 Septin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 381.223724365234 2 381.223811 760.433069 -0.20512 -7.8197E-05 0.19605 7.4739E-05 -0.0090705 -3.4579E-06 381.223815165332 27.527 0.59267 27.527 27.154 27.747 0 18 11 2 0 0 0 0.013038 1 17853 73.616 9.0535 1 15129000 570 2132 529 533 659 659 ADTLTPEECQQFK 13 Unmodified _ADTLTPEECQQFK_ 0 0 0 Q16181 Q16181 Q16181 SEPT7 Septin-7 MULTI-MSMS 210214_Eclipse_Hela_QC 783.858947753906 2 783.858863 1565.70317 1.0252 0.00080357 -0.42027 -0.00032943 0.60488 0.00047414 783.858692331169 43.019 0.64711 43.019 42.597 43.244 0 45 12 5 0 0 0 5.8797E-09 1 39892 129.28 99.513 1 38286000 571 2223 530 534 660 660 ADTNLGNILLNVLIPPNMPCTR 22 Unmodified _ADTNLGNILLNVLIPPNMPCTR_ 0 0 0 Q9UKX7 Q9UKX7 Q9UKX7 NUP50 Nuclear pore complex protein Nup50 MULTI-MSMS 210214_Eclipse_Hela_QC 1219.14624023438 2 1218.64052 2435.26649 1.8505 0.0022551 0.94799 0.0011553 2.7985 0.0034103 1219.14343602434 110.32 0.44862 110.32 110.15 110.6 0 19 8 4 0 0 0 7.6931E-07 1 133906 84.566 79.765 1 6752300 572 3919 531 535 661 661 ADTQTYQPYNK 11 Unmodified _ADTQTYQPYNK_ 0 0 0 P84090 P84090 P84090 ERH Enhancer of rudimentary homolog MULTI-MSMS 210214_Eclipse_Hela_QC 664.80908203125 2 664.809499 1327.60444 0.79271 0.000527 -0.43247 -0.00028751 0.36025 0.0002395 664.809506629935 23.291 0.69831 23.291 23.002 23.7 0 54 13 5 0 0 0 3.3209E-13 1 11661 158.37 142.16 1 123360000 573 1782 532 536 662 662 ADTQYILPNDIGVSSLDCR 19 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADTQYILPNDIGVSSLDCR_ 1 0 0 Q9NY33 Q9NY33 Q9NY33 DPP3 Dipeptidyl peptidase 3 MULTI-MSMS 210214_Eclipse_Hela_QC 1090.52490234375 2 1090.02043 2178.0263 1.0275 0.00112 0.29087 0.00031705 1.3184 0.0014371 1090.52293228247 107.53 0.14877 107.53 107.46 107.61 0 6 2 3 0 0 0 6.0034E-09 1 130080 109.22 95.191 1 17492000 574 3736 533 537 663 663 ADTSQEICSPR 11 Unmodified _ADTSQEICSPR_ 0 0 0 P52948 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-SECPEP 210214_Eclipse_Hela_QC 632.343078613281 2 632.285334 1262.55611 0.42714 0.00027008 -0.38087 -0.00024082 0.046272 2.9257E-05 632.28500541555 22.402 0.39725 22.402 22.156 22.553 0 18 7 3 0 0 0 0.007757 1 10601 89.247 59.504 1 4479400 575 1488 534 538 664 664 ADTSSQGALVFLSK 14 Unmodified _ADTSSQGALVFLSK_ 0 0 0 Q7Z417 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 712.877258300781 2 712.375006 1422.73546 0.95543 0.00068063 1.2073 0.00086005 2.1627 0.0015407 712.375792681891 70.541 0.39763 70.541 70.323 70.72 0 19 7 3 0 0 0 0.0056932 1 78580 47.815 33.149 1 8427400 576 2541 535 539 665 665 ADTTPNGPQGAGAVQFMMTNK 21 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADTTPNGPQGAGAVQFMMTNK_ 1 0 0 P57088 P57088 P57088 TMEM33 Transmembrane protein 33 MULTI-MSMS 210214_Eclipse_Hela_QC 1090.00366210938 2 1089.50135 2176.98814 1.2734 0.0013874 0.15357 0.00016731 1.427 0.0015547 1090.00267528776 92.369 0.49754 92.369 92.096 92.593 0 24 9 3 0 0 0 0.00055228 1 108975 46.964 41.981 1 4847900 577 1562 536 540 666 666 ADTTTPTTIDPIHEPPSLPPEPK 23 Unmodified _ADTTTPTTIDPIHEPPSLPPEPK_ 0 0 0 O60885 O60885 O60885 BRD4 Bromodomain-containing protein 4 MULTI-MSMS 210214_Eclipse_Hela_QC 819.402648925781 3 818.751472 2453.23259 1.426 0.0011676 0.57391 0.00046989 1.9999 0.0016374 819.086100735174 70.61 1.4439 70.61 70.024 71.468 0 67 28 4 0 0 0 0.057186 1 78345 13.057 4.6673 1 3604000 578 405 537 541 667 667 ADVDVQPYAFTTK 13 Unmodified _ADVDVQPYAFTTK_ 0 0 0 Q9BZE4 Q9BZE4 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 728.363464355469 2 727.861731 1453.70891 -0.026459 -1.9259E-05 0.66591 0.00048469 0.63945 0.00046543 727.862243991961 62.078 0.54123 62.078 61.84 62.381 0 24 10 3 0 0 0 2.5455E-06 1 66775 113.63 93.342 1 13302000 579 3367 538 542 668 668 ADVDVSGPK 9 Unmodified _ADVDVSGPK_ 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-SECPEP 210214_Eclipse_Hela_QC 444.245208740234 2 444.227082 886.439611 0.10589 4.7039E-05 0.0040095 1.7811E-06 0.1099 4.882E-05 444.227092005968 21.036 0.49802 21.036 20.812 21.31 0 27 9 4 0 0 0 0.032441 1 8621 91.069 59.647 1 50594000 580 1896 539 543 669 669 ADVEEEFLAFR 11 Unmodified _ADVEEEFLAFR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 210214_Eclipse_Hela_QC 663.322570800781 2 663.322242 1324.62993 0.64555 0.00042821 -0.82871 -0.0005497 -0.18316 -0.00012149 663.321442410272 89.591 0.74555 89.591 89.163 89.909 0 24 14 3 0 0 0 0.019491 1 105062 43.512 37.731 1 3550700 581 1300 540 544 670 670 ADVEEEFLALR 11 Unmodified _ADVEEEFLALR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 210214_Eclipse_Hela_QC 646.329895019531 2 646.330067 1290.64558 0.76242 0.00049278 -0.1855 -0.00011989 0.57693 0.00037288 646.32989785345 86.883 0.74554 86.883 86.538 87.284 0 26 14 2 0 0 0 3.047E-05 1 101207 107.15 77.681 1 16347000 582 1300 541 545 671 671 ADVEEEFLALRK 12 Unmodified _ADVEEEFLALRK_ 0 0 1 P46013 P46013 P46013 MKI67 Antigen KI-67 MSMS 210214_Eclipse_Hela_QC 473.921020507812 3 473.920791 1418.74054 NaN NaN NaN NaN NaN NaN NaN 67.668 1 67.668 67.168 68.168 0 0 0 0 0.039492 1 74677 27.862 20.496 1 583 1300 542 546 672 672 ADVEEESLALR 11 Unmodified _ADVEEESLALR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 210214_Eclipse_Hela_QC 616.312438964844 2 616.311874 1230.6092 1.2226 0.00075348 -0.27344 -0.00016853 0.94912 0.00058495 616.311510738975 51.257 0.57204 51.257 50.976 51.548 0 20 11 2 0 0 0 1.8134E-05 2 51649 111.61 61 1 6114700 584 1300 543 547 673;674 674 ADVEGELLACR 11 Unmodified _ADVEGELLACR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 210214_Eclipse_Hela_QC 616.801635742188 2 616.80062 1231.58669 0.93689 0.00057787 -0.26038 -0.0001606 0.67651 0.00041727 616.800249773132 57.019 0.79627 57.019 56.716 57.512 0 38 15 4 0 0 0 0.00044478 1 59769 81.95 63.17 1 6551500 585 1300 544 548 675 675 ADVFHAYLSLLK 12 Unmodified _ADVFHAYLSLLK_ 0 0 0 Q86VP6 Q86VP6 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 688.884338378906 2 688.88227 1375.74999 1.6914 0.0011652 -0.095576 -6.5841E-05 1.5958 0.0010993 688.88212420211 98.41 0.84615 98.41 98.113 98.959 0 37 16 4 0 0 0 0.00018736 1 117263 86.898 75.408 1 3988300 586 2587 545 549 676 676 ADVFPGNDSTASQDVANR 18 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADVFPGNDSTASQDVANR_ 1 0 0 P17252 P17252 P17252 PRKCA Protein kinase C alpha type MULTI-MSMS 210214_Eclipse_Hela_QC 953.430847167969 2 953.4323 1904.85005 1.6899 0.0016112 0.34069 0.00032482 2.0306 0.0019361 953.432535919003 74.311 0.44788 74.311 74.057 74.505 0 20 8 3 0 0 0 8.2982E-05 2 83838 66.498 45.438 1 3728300 587 930 546 550 677;678 677 ADVIITSGGVSMGEK 15 Unmodified _ADVIITSGGVSMGEK_ 0 0 0 Q9NQX3 Q9NQX3 Q9NQX3 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase MULTI-MSMS 210214_Eclipse_Hela_QC 732.374328613281 2 732.374149 1462.73374 1.0582 0.000775 -1.2236 -0.00089613 -0.1654 -0.00012113 732.373490839818 58.926 0.69648 58.926 58.358 59.055 0 27 13 4 0 0 0 0.008877 1 62334 40.725 29.573 1 3469400 588 3606 547 551 679 679 ADVIQATGDAICIFR 15 Unmodified _ADVIQATGDAICIFR_ 0 0 0 Q08945 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 210214_Eclipse_Hela_QC 825.92138671875 2 825.419422 1648.82429 1.5787 0.0013031 0.3609 0.0002979 1.9396 0.001601 825.419633029451 94.969 1.2375 94.969 94.483 95.72 0 85 24 5 0 0 0 3.9358E-16 1 112346 145.91 129.69 1 57209000 589 1889 548 552 680 680 ADVLDLHEAGGEDFAMDEDGDESIHK 26 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADVLDLHEAGGEDFAMDEDGDESIHK_ 1 0 0 Q9Y5S9 Q9Y5S9 Q9Y5S9 RBM8A RNA-binding protein 8A MULTI-MSMS 210214_Eclipse_Hela_QC 953.746276855469 3 953.075014 2856.20321 1.3104 0.0012489 0.21501 0.00020493 1.5254 0.0014539 953.409535030372 90.082 1.0437 90.082 89.71 90.753 0 108 20 7 0 0 0 8.9829E-20 1 105592 129.23 126.5 1 112770000 590 4123 549 553 681 681 ADVLFIAPR 9 Unmodified _ADVLFIAPR_ 0 0 0 Q92542 Q92542 Q92542 NCSTN Nicastrin MULTI-MSMS 210214_Eclipse_Hela_QC 501.292877197266 2 501.292559 1000.57057 0.73266 0.00036728 0.066405 3.3288E-05 0.79907 0.00040057 501.292648474786 68.48 0.49693 68.48 68.256 68.753 0 17 9 2 0 0 0 0.0060848 1 75801 62.464 45.079 1 2642700 591 2881 550 554 682 682 ADVLSEEAILK 11 Unmodified _ADVLSEEAILK_ 0 0 0 Q9Y6E2 Q9Y6E2 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 594.330261230469 2 594.329536 1186.64452 1.0422 0.00061943 -0.13351 -7.9349E-05 0.90872 0.00054008 594.329374637733 67.735 0.59669 67.735 67.411 68.008 0 28 11 4 0 0 0 0.0037978 1 74704 55.461 30.324 1 19094000 592 4152 551 555 683 683 ADVLSVLR 8 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADVLSVLR_ 1 0 0 Q6P1J9 Q6P1J9 Q6P1J9 CDC73 Parafibromin MULTI-SECPEP 210214_Eclipse_Hela_QC 914.986694335938 1 914.530558 913.523281 1.3475 0.0012323 0.41946 0.00038361 1.7669 0.0016159 914.53087039318 106.45 0.19951 106.45 106.32 106.52 0 6 3 2 0 0 0 0.03956 1 128530 50.632 7.7174 1 8765400 593 2441 552 556 684 684 ADVLTTGAGNPVGDK 15 Unmodified _ADVLTTGAGNPVGDK_ 0 0 0 P04040 P04040 P04040 CAT Catalase MULTI-MSMS 210214_Eclipse_Hela_QC 707.862426757812 2 707.862263 1413.70997 0.8767 0.00062058 -0.25078 -0.00017752 0.62591 0.00044306 707.862158402064 42.167 0.79249 42.167 41.804 42.597 0 48 15 4 0 0 0 0.00013706 1 38558 94.191 75.411 1 55913000 594 653 553 557 685 685 ADVQSIIGLQR 11 Unmodified _ADVQSIIGLQR_ 0 0 0 Q13263 Q13263 Q13263 TRIM28 Transcription intermediary factor 1-beta MULTI-MSMS 210214_Eclipse_Hela_QC 600.3408203125 2 600.340769 1198.66699 0.52758 0.00031672 -0.12733 -7.6444E-05 0.40024 0.00024028 600.340625558656 66.806 1.013 66.806 66.448 67.461 0 54 20 5 0 0 0 1.8554E-05 1 73202 111.46 64.258 1 72268000 595 1966 554 558 686 686 ADVVESWIGEK 11 Unmodified _ADVVESWIGEK_ 0 0 0 Q13813 Q13813 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 210214_Eclipse_Hela_QC 616.813049316406 2 616.81151 1231.60847 0.53021 0.00032704 1.0319 0.00063652 1.5622 0.00096356 616.81250526622 67.68 0.96231 67.68 67.095 68.058 0 35 19 3 0 0 0 0.019819 1 74460 43.297 21.06 1 20400000 596 2034 555 559 687 687 ADVVLPAR 8 Unmodified _ADVVLPAR_ 0 0 0 Q6UW63 Q6UW63 Q6UW63 KDELC1 KDEL motif-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 420.750701904297 2 420.750527 839.486502 0.037972 1.5977E-05 0.25463 0.00010714 0.2926 0.00012311 420.750631931697 33.371 0.63641 33.371 33.081 33.718 0 20 12 2 0 0 0 0.054688 1 26176 39.957 20.035 1 2523700 597 2477 556 560 688 688 ADVVVSGPK 9 Unmodified _ADVVVSGPK_ 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 210214_Eclipse_Hela_QC 436.247894287109 2 436.247818 870.481082 0.28747 0.00012541 0.090631 3.9538E-05 0.3781 0.00016495 436.247707098617 23.373 0.64851 23.373 22.952 23.601 0 35 12 5 0 0 0 0.00078685 1 11878 88.819 74.043 1 39628000 598 1896 557 561 689 689 ADWLSHYWMPK 11 Unmodified _ADWLSHYWMPK_ 0 0 0 P08243 P08243 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] MULTI-MSMS 210214_Eclipse_Hela_QC 478.560516357422 3 478.56054 1432.65979 0.3596 0.00017209 -0.21762 -0.00010415 0.14198 6.7944E-05 478.560469149505 78.777 1.2431 78.777 78.369 79.612 0 65 24 4 0 0 0 0.012319 1 89895 38.783 35.56 1 8760600 599 747 558 562 690 690 ADWLSHYWMPK 11 Unmodified _ADWLSHYWMPK_ 0 0 0 P08243 P08243 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] MULTI-MSMS 210214_Eclipse_Hela_QC 717.338745117188 2 717.337172 1432.65979 0.78993 0.00056664 0.4649 0.00033349 1.2548 0.00090014 717.337790764477 78.745 0.94483 78.745 78.419 79.363 0 61 18 5 0 0 0 0.026094 1 89947 46.462 33.454 1 8787000 600 747 558 562 691 691 ADYSTVPPPSSGSAGGGGGGGGGGGVNDAFK 31 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ADYSTVPPPSSGSAGGGGGGGGGGGVNDAFK_ 1 0 0 Q96AE4 Q96AE4 Q96AE4 FUBP1 Far upstream element-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1340.60302734375 2 1340.09951 2678.18447 2.028 0.0027177 0.39387 0.00052783 2.4219 0.0032456 1340.60121840091 74.335 1.0954 74.335 73.808 74.903 0 81 21 5 0 0 0 5.1837E-05 2 83551 45.704 41.156 1 6479100 601 2962 559 563 692;693 692 ADYTSHLR 8 Unmodified _ADYTSHLR_ 0 0 0 Q92616 Q92616 Q92616 GCN1L1 Translational activator GCN1 MULTI-MSMS 210214_Eclipse_Hela_QC 481.738677978516 2 481.738148 961.461744 0.032302 1.5561E-05 0.8522 0.00041054 0.88451 0.0004261 481.7382527485 20.588 0.24877 20.588 20.414 20.663 0 16 4 5 0 0 0 0.012771 1 7936 62.88 39.357 1 16271000 602 2894 560 564 694 694 AEAAASALADADADLEER 18 Unmodified _AEAAASALADADADLEER_ 0 0 0 O43633 O43633 O43633 CHMP2A Charged multivesicular body protein 2a MSMS 210214_Eclipse_Hela_QC 894.916442871094 2 894.915952 1787.81735 NaN NaN NaN NaN NaN NaN NaN 68.051 1 68.051 67.551 68.551 0 0 0 0 1.692E-15 1 75215 113.35 97.807 1 603 318 561 565 695 695 AEAAGLIGWLK 11 Unmodified _AEAAGLIGWLK_ 0 0 0 O60287 O60287 O60287 URB1 Nucleolar pre-ribosomal-associated protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 564.824279785156 2 564.824224 1127.63389 1.2341 0.00069704 -0.71785 -0.00040546 0.51624 0.00029159 564.823762454931 85.78 0.54695 85.78 85.494 86.041 0 21 10 3 0 0 0 0.0027517 1 99971 60.59 44.928 1 2142500 604 358 562 566 696 696 AEAALLLLPEAAAER 15 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AEAALLLLPEAAAER_ 1 0 0 Q96JB2 Q96JB2 Q96JB2 COG3 Conserved oligomeric Golgi complex subunit 3 MULTI-MSMS 210214_Eclipse_Hela_QC 790.439697265625 2 790.438138 1578.86172 1.6004 0.001265 0.32096 0.0002537 1.9214 0.0015187 790.438340506301 111.56 0.2991 111.56 111.39 111.69 0 12 5 4 0 0 0 0.0016185 1 135641 49.5 37.635 1 2233100 605 3073 563 567 697 697 AEAAVVAVAEK 11 Unmodified _AEAAVVAVAEK_ 0 0 0 Q8IZQ5 Q8IZQ5 Q8IZQ5 SELH Selenoprotein H MULTI-MSMS 210214_Eclipse_Hela_QC 529.298645019531 2 529.298039 1056.58152 0.23252 0.00012307 0.32466 0.00017184 0.55718 0.00029492 529.298189723991 31.197 0.54783 31.197 30.873 31.421 0 21 10 3 0 0 0 0.00031908 1 22962 85.355 65.568 1 10318000 606 2662 564 568 698 698 AEACFVNCVER 11 Unmodified _AEACFVNCVER_ 0 0 0 O60220 O60220 O60220 TIMM8A Mitochondrial import inner membrane translocase subunit Tim8 A MULTI-MSMS 210214_Eclipse_Hela_QC 677.798706054688 2 677.797554 1353.58056 1.0341 0.00070091 -0.28827 -0.00019539 0.74583 0.00050552 677.797596909394 41.827 0.44738 41.827 41.506 41.953 0 28 8 4 0 0 0 0.00037395 1 38141 83.869 79.851 1 14259000 607 352 565 569 699 699 AEADEIFQELEK 12 Unmodified _AEADEIFQELEK_ 0 0 0 Q6NS38 Q6NS38 Q6NS38 ALKBH2 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 MULTI-MSMS 210214_Eclipse_Hela_QC 711.846984863281 2 711.343372 1420.67219 0.86595 0.00061599 0.0785 5.584E-05 0.94445 0.00067183 711.343532173305 84.027 0.49777 84.027 83.803 84.301 0 15 9 2 0 0 0 0.0014315 1 97528 62.303 51.593 1 2910000 608 2426 566 570 700 700 AEAEAQAEELSFPR 14 Unmodified _AEAEAQAEELSFPR_ 0 0 0 P11498 P11498 P11498 PC Pyruvate carboxylase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 774.872985839844 2 774.370452 1546.72635 1.257 0.00097337 0.1596 0.00012359 1.4166 0.001097 774.370637589525 58.333 0.54737 58.333 58.109 58.656 0 35 10 4 0 0 0 1.218E-19 1 61530 157.68 146.47 1 23532000 609 835 567 571 701 701 AEAEAWYQTK 10 Unmodified _AEAEAWYQTK_ 0 0 0 CON__P08729;Q5XKE5;CON__Q5XKE5;CON__Q3KNV1;P08729;CON__Q9DCV7 CON__P08729;Q5XKE5;CON__Q3KNV1;CON__Q9DCV7 CON__P08729 KRT79;KRT7 Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 7 MULTI-MSMS 210214_Eclipse_Hela_QC 597.775512695312 2 598.782753 1195.55095 0.47292 0.00028318 -0.30276 -0.00018129 0.17016 0.00010189 598.78247130933 35.417 1.968 35.417 34.895 36.863 0 112 37 5 0 0 0 6.3947E-06 6 29218 126.82 105.88 1 402070000 + 610 60;93;112;107 568 572 702;703;704;705;706;707 704 AEAESDALPDDTVIESEALPSDIAAEAR 28 Unmodified _AEAESDALPDDTVIESEALPSDIAAEAR_ 0 0 0 Q9GZR7 Q9GZR7 Q9GZR7 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 210214_Eclipse_Hela_QC 1443.68322753906 2 1443.18036 2884.34617 2.4746 0.0035712 0.17307 0.00024977 2.6476 0.003821 1443.68187314565 100.91 0.64708 100.91 100.65 101.3 0 37 12 5 0 0 0 1.707E-05 1 120960 90.714 79.926 1 5518300 611 3392 569 573 708 708 AEAESMYQIK 10 Unmodified _AEAESMYQIK_ 0 0 0 CON__P05787;P05787;CON__H-INV:HIT000292931;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 210214_Eclipse_Hela_QC 585.279663085938 2 585.278989 1168.54342 -0.090426 -5.2924E-05 -0.12302 -7.2E-05 -0.21344 -0.00012492 585.27901970612 35.856 1.8673 35.856 35.392 37.26 0 92 37 4 0 0 0 6.7265E-06 1 29500 126.41 52.747 1 586350000 + 612 57 570 574 709 709 AEAESMYQIK 10 Oxidation (M) _AEAESM(Oxidation (M))YQIK_ AEAESM(1)YQIK AEAESM(75)YQIK 0 1 0 CON__P05787;P05787;CON__H-INV:HIT000292931;CON__Q9H552 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 210214_Eclipse_Hela_QC 593.276123046875 2 593.276446 1184.53834 0.030522 1.8108E-05 -0.4405 -0.00026134 -0.40998 -0.00024323 593.276207501891 35.888 0.6334 35.888 35.54 36.174 0 26 12 3 0 0 0 0.0034992 1 29775 75.043 28.709 1 11242000 + 613 57 570 575 710 710 13 AEAETLPSLSITK 13 Unmodified _AEAETLPSLSITK_ 0 0 0 O95340 O95340 O95340 PAPSS2 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase MULTI-MSMS 210214_Eclipse_Hela_QC 680.373107910156 2 680.371932 1358.72931 0.77757 0.00052903 1.0266 0.0006985 1.8042 0.0012275 680.373014327293 65.135 0.74767 65.135 64.556 65.304 0 23 14 2 0 0 0 0.00078176 1 70995 75.695 55.909 1 7269500 614 559 571 576 711 711 AEAGAGLSETVTETTVTVTTEPENR 25 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AEAGAGLSETVTETTVTVTTEPENR_ 1 0 0 O60927 O60927 O60927 PPP1R11 Protein phosphatase 1 regulatory subunit 11 MULTI-MSMS 210214_Eclipse_Hela_QC 1303.63195800781 2 1303.1274 2604.24025 2.7769 0.0036187 0.72048 0.00093887 3.4974 0.0045576 1303.62972038255 100.15 0.49704 100.15 99.854 100.35 0 15 9 2 0 0 0 4.4937E-10 1 119798 118.47 107.53 1 2849800 615 411 572 577 712 712 AEAGAGSATEFQFR 14 Unmodified _AEAGAGSATEFQFR_ 0 0 0 P46783;Q9NQ39 P46783 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like MULTI-MSMS 210214_Eclipse_Hela_QC 721.338928222656 2 721.338955 1440.66336 1.2181 0.00087868 0.022425 1.6176E-05 1.2405 0.00089486 721.338983060409 50.107 1.8628 50.107 49.585 51.448 0 110 37 6 0 0 0 3.3464E-30 2 49723 229.53 223.5 1 236720000 616 1318 573 578 713;714 713 AEAGDAALSVAEWLR 15 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AEAGDAALSVAEWLR_ 1 0 0 Q96P48 Q96P48 Q96P48 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 801.413696289062 2 800.901919 1599.78929 2.4122 0.0019319 -0.82937 -0.00066424 1.5828 0.0012677 800.901139370474 110.47 0.24952 110.47 110.35 110.6 0 11 4 3 0 0 0 2.7552E-11 2 134027 128.67 118.99 1 4516700 617 3108 574 579 715;716 715 AEAGDNLGALVR 12 Unmodified _AEAGDNLGALVR_ 0 0 0 P49411 P49411 P49411 TUFM Elongation factor Tu, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 593.314331054688 2 593.314751 1184.61495 0.70567 0.00041868 0.018145 1.0766E-05 0.72381 0.00042945 593.314799568304 51.921 0.79632 51.921 51.399 52.195 0 61 15 5 0 0 0 0.00027022 1 52155 81.338 66.664 1 107300000 618 1371 575 580 717 717 AEAGLGALPR 10 Unmodified _AEAGLGALPR_ 0 0 0 Q9NR77 Q9NR77 Q9NR77 PXMP2 Peroxisomal membrane protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 477.772644042969 2 477.771991 953.529429 -0.15143 -7.2348E-05 2.071 0.00098946 1.9196 0.00091711 477.772003822187 40.939 0.74617 40.939 40.512 41.258 0 22 14 2 0 0 0 0.0013553 1 36898 75.109 44.924 1 3004700 619 3618 576 581 718 718 AEAGPEGVAPAPEGEK 16 Unmodified _AEAGPEGVAPAPEGEK_ 0 0 0 Q9Y4L1 Q9Y4L1 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 755.366394042969 2 754.865002 1507.71545 0.78837 0.00059511 0.27619 0.00020849 1.0646 0.0008036 754.865140644446 28.767 0.60631 28.767 28.525 29.131 0 46 12 6 0 0 0 6.3603E-05 1 19488 84.892 76.147 1 34331000 620 4089 577 582 719 719 AEAGVPAEFSIWTR 14 Unmodified _AEAGVPAEFSIWTR_ 0 0 0 P21333 P21333 P21333 FLNA Filamin-A MULTI-MSMS 210214_Eclipse_Hela_QC 767.391479492188 2 767.388448 1532.76234 1.0928 0.00083857 0.65482 0.00050251 1.7476 0.0013411 767.389110155296 87.959 1.5807 87.959 87.234 88.815 0 85 31 5 0 0 0 0.0001148 1 102649 99.752 65.886 1 134670000 621 995 578 583 720 720 AEALASAIASTK 12 Unmodified _AEALASAIASTK_ 0 0 0 Q9NVT9 Q9NVT9 Q9NVT9 ARMC1 Armadillo repeat-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 566.814147949219 2 566.814053 1131.61355 0.25821 0.00014636 -0.80612 -0.00045692 -0.5479 -0.00031056 566.813564708333 41.051 0.74586 41.051 40.661 41.407 0 21 14 2 0 0 0 0.029169 1 37092 36.447 20.244 1 5244700 622 3692 579 584 721 721 AEALEDLVGFK 11 Unmodified _AEALEDLVGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 210214_Eclipse_Hela_QC 596.31640625 2 596.316428 1190.6183 0.58317 0.00034775 -0.36504 -0.00021768 0.21813 0.00013007 596.316186250466 82.263 0.58387 82.263 81.898 82.482 0 23 11 3 0 0 0 0.002509 1 94904 61.78 51.817 1 8139300 623 1300 580 585 722 722 AEALPLQR 8 Unmodified _AEALPLQR_ 0 0 0 P23229 P23229 P23229 ITGA6 Integrin alpha-6;Integrin alpha-6 heavy chain;Integrin alpha-6 light chain;Processed integrin alpha-6 MULTI-MSMS 210214_Eclipse_Hela_QC 449.261871337891 2 449.261259 896.507966 0.16949 7.6145E-05 0.16865 7.5769E-05 0.33814 0.00015191 449.2612710201 32.622 0.57305 32.622 32.311 32.884 0 14 11 2 0 0 0 0.0078604 1 25152 70.912 32.121 1 3196100 624 1017 581 586 723 723 AEAMEILLSR 10 Unmodified _AEAMEILLSR_ 0 0 0 Q86XZ4 Q86XZ4 Q86XZ4 SPATS2 Spermatogenesis-associated serine-rich protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 566.805236816406 2 566.805174 1131.59579 0.82125 0.00046549 -0.25612 -0.00014517 0.56513 0.00032032 566.805115699914 72.225 0.44756 72.225 71.965 72.413 0 13 8 2 0 0 0 0.0034025 1 81157 64.04 47.5 1 1606800 625 2604 582 587 724 724 AEAPLPSPK 9 Unmodified _AEAPLPSPK_ 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 210214_Eclipse_Hela_QC 455.757537841797 2 455.255643 908.496732 -0.32474 -0.00014784 -0.076314 -3.4742E-05 -0.40105 -0.00018258 455.255497012531 26.283 0.59738 26.283 25.91 26.507 0 29 11 3 0 0 0 0.017937 1 16004 49.715 34.939 1 20335000 626 1896 583 588 725 725 AEAQGSTTLLVSYR 14 Unmodified _AEAQGSTTLLVSYR_ 0 0 0 Q8TEM1 Q8TEM1 Q8TEM1 NUP210 Nuclear pore membrane glycoprotein 210 MULTI-MSMS 210214_Eclipse_Hela_QC 748.391906738281 2 748.391187 1494.76782 1.6129 0.0012071 1.315 0.00098414 2.9279 0.0021912 748.391150494894 55.346 0.59719 55.346 55.073 55.67 0 26 11 3 0 0 0 0.0010876 1 57425 55.776 30.9 1 4766100 627 2811 584 589 726 726 AEAQQVEALPGPSLDQWHR 19 Unmodified _AEAQQVEALPGPSLDQWHR_ 0 0 0 Q66PJ3 Q66PJ3 Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 MULTI-MSMS 210214_Eclipse_Hela_QC 711.69140625 3 711.355498 2131.04467 1.0773 0.00076634 0.49297 0.00035068 1.5703 0.001117 711.355916770063 67.711 0.79506 67.711 67.411 68.207 0 41 15 4 0 0 0 1.8701E-06 1 74592 66.893 65.33 1 17055000 628 2397 585 590 727 727 AEASIQAGAGDGEWEESEVK 20 Unmodified _AEASIQAGAGDGEWEESEVK_ 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 210214_Eclipse_Hela_QC 1033.13342285156 2 1031.96363 2061.91271 1.2196 0.0012586 -0.13088 -0.00013506 1.0887 0.0011235 1032.46491491262 55.258 0.59768 55.258 54.973 55.571 0 42 11 5 0 0 0 1.328E-06 2 57313 88.552 83.168 1 14057000 629 1896 586 591 728;729 729 AEASSGDHPTDTEMK 15 Unmodified _AEASSGDHPTDTEMK_ 0 0 0 Q02790 Q02790 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed MULTI-SECPEP 210214_Eclipse_Hela_QC 788.895080566406 2 788.333209 1574.65187 0.73663 0.00058071 -0.49027 -0.0003865 0.24636 0.00019421 788.33286721168 16.216 0.43188 16.216 16.113 16.545 0 16 9 3 0 0 0 0.00046899 1 2728 83.617 77.582 1 42445000 630 1831 587 592 730 730 AEAVVNTVDISER 13 Unmodified _AEAVVNTVDISER_ 0 0 0 Q8IY81 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 210214_Eclipse_Hela_QC 701.863342285156 2 701.862263 1401.70997 1.0339 0.00072564 0.73564 0.00051632 1.7695 0.001242 701.862774834166 48.913 0.94291 48.913 48.643 49.585 0 33 18 3 0 0 0 8.1103E-09 1 48204 127.42 94.199 1 6456000 631 2645 588 593 731 731 AECEILMMVGLPAAGK 16 Unmodified _AECEILMMVGLPAAGK_ 0 0 0 Q9BUJ2 Q9BUJ2 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 845.923400878906 2 845.422261 1688.82997 1.772 0.0014981 -1.1336 -0.00095833 0.63849 0.00053979 845.422202027809 102.77 0.9442 102.77 102.24 103.19 0 72 18 5 0 0 0 1.06E-07 1 123288 113.47 104.47 1 13723000 632 3289 589 594 732 732 AEDDQPLPGVLLSLSGGLFR 20 Unmodified _AEDDQPLPGVLLSLSGGLFR_ 0 0 0 Q15155;P69849;Q5JPE7 Q15155;P69849 P69849 NOMO1;NOMO3;NOMO2 Nodal modulator 1;Nodal modulator 3;Nodal modulator 2 MULTI-MSMS 210214_Eclipse_Hela_QC 1043.05871582031 2 1042.55476 2083.09497 1.9241 0.0020059 0.90043 0.00093874 2.8245 0.0029447 1043.05734757513 110.37 0.34891 110.37 110.25 110.6 0 13 6 3 0 0 0 0.001761 1 133986 44.457 36.732 1 4259400 633 2160;1737 590 595 733 733 AEDEEELLR 9 Unmodified _AEDEEELLR_ 0 0 0 Q27J81 Q27J81 Q27J81 INF2 Inverted formin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 552.264099121094 2 552.264393 1102.51423 0.54904 0.00030321 3.8574 0.0021303 4.4065 0.0024335 552.264450758547 39.814 0.93652 39.814 39.426 40.362 0 47 18 5 0 0 0 0.00076531 1 35459 89.698 69.911 1 10147000 634 2264 591 596 734 734 AEDFQIEGYNPHPTIK 16 Unmodified _AEDFQIEGYNPHPTIK_ 0 0 0 P04818 P04818 P04818 TYMS Thymidylate synthase MULTI-MSMS 210214_Eclipse_Hela_QC 620.639221191406 3 620.303852 1857.88973 0.27173 0.00016855 0.51102 0.00031699 0.78275 0.00048554 620.304489158841 56.363 0.5978 56.363 56.068 56.666 0 31 11 4 0 0 0 0.042167 1 58678 13.947 4.7835 1 21425000 635 670 592 597 735 735 AEDGENYDIK 10 Unmodified _AEDGENYDIK_ 0 0 0 O75347 O75347 O75347 TBCA Tubulin-specific chaperone A MULTI-MSMS 210214_Eclipse_Hela_QC 577.254028320312 2 577.254025 1152.4935 -0.68443 -0.00039509 0.80921 0.00046712 0.12478 7.2029E-05 577.254519740358 25.283 0.49718 25.283 25.064 25.561 0 29 9 4 0 0 0 0.00015333 1 14606 103.55 93.079 1 72265000 636 439 593 598 736 736 AEDGSVIDYELIDQDAR 17 Unmodified _AEDGSVIDYELIDQDAR_ 0 0 0 P07355 P07355 P07355 ANXA2 Annexin A2 MULTI-MSMS 210214_Eclipse_Hela_QC 954.945739746094 2 954.944709 1907.87487 1.1453 0.0010937 -0.57297 -0.00054715 0.57229 0.00054651 954.94411158488 82.683 1.7562 82.683 82.395 84.152 0 134 36 6 0 0 0 5.0531E-92 3 95424 247.67 235.45 1 519620000 637 720 594 599 737;738;739 737 AEDGSVIDYELIDQDAR 17 Unmodified _AEDGSVIDYELIDQDAR_ 0 0 0 P07355 P07355 P07355 ANXA2 Annexin A2 MULTI-MSMS 210214_Eclipse_Hela_QC 955.446533203125 2 954.944709 1907.87487 1.1186 0.0010682 0.18061 0.00017247 1.2992 0.0012406 955.446429057972 85.547 1.1932 85.547 85.097 86.29 0 69 23 5 0 0 0 1.6357E-05 1 99437 95.508 89.066 1 15100000 638 720 594 599 740 740 AEDNADTLALVFEAPNQEK 19 Unmodified _AEDNADTLALVFEAPNQEK_ 0 0 0 P12004 P12004 P12004 PCNA Proliferating cell nuclear antigen MULTI-MSMS 210214_Eclipse_Hela_QC 1037.49475097656 2 1038.00002 2073.98548 1.6154 0.0016768 0.062605 6.4984E-05 1.678 0.0017418 1038.50105589138 92.818 1.1932 92.818 92.395 93.588 0 173 23 11 0 0 0 7.6466E-146 3 109595 306.05 298.13 1 214550000 639 843 595 600 741;742;743 742 AEDNGVLICEYVDQDSYR 18 Unmodified _AEDNGVLICEYVDQDSYR_ 0 0 0 Q68CP9 Q68CP9 Q68CP9 ARID2 AT-rich interactive domain-containing protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 1073.4765625 2 1073.47331 2144.93206 1.1582 0.0012433 1.7118 0.0018375 2.87 0.0030808 1073.47524077869 81.427 0.34801 81.427 81.203 81.551 0 11 6 2 0 0 0 0.023192 1 93851 33.685 21.539 1 3523000 640 2398 596 601 744 744 AEDQHLVEMEDTLNK 15 Unmodified _AEDQHLVEMEDTLNK_ 0 0 0 P30622 P30622 P30622 CLIP1 CAP-Gly domain-containing linker protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 591.611694335938 3 591.277086 1770.80943 0.78751 0.00046564 -0.26095 -0.0001543 0.52656 0.00031134 591.277178757375 52.994 0.54861 52.994 52.793 53.341 0 28 10 4 0 0 0 0.035529 1 54192 20.354 13.284 1 3632700 641 1131 597 602 745 745 AEDSGEYHCVYHFVSAPK 18 Unmodified _AEDSGEYHCVYHFVSAPK_ 0 0 0 Q9Y639 Q9Y639 Q9Y639 NPTN Neuroplastin MULTI-MSMS 210214_Eclipse_Hela_QC 524.985778808594 4 524.734911 2094.91054 0.048516 2.5458E-05 -0.0062163 -3.2619E-06 0.0423 2.2196E-05 524.734847759491 45.714 0.99517 45.714 45.384 46.379 0 39 19 3 0 0 0 0.0019169 1 43714 39.863 38.213 1 22367000 642 4135 598 603 746 746 AEDSICLADSK 11 Unmodified _AEDSICLADSK_ 0 0 0 Q7Z5K2 Q7Z5K2 Q7Z5K2 WAPAL Wings apart-like protein homolog MSMS 210214_Eclipse_Hela_QC 604.776611328125 2 604.77681 1207.53907 NaN NaN NaN NaN NaN NaN NaN 33.104 1 33.104 32.604 33.604 0 0 0 0 0.0030855 1 25847 83.883 54.216 1 643 2552 599 604 747 747 AEDYEENLQVMR 12 Unmodified _AEDYEENLQVMR_ 0 0 0 Q02241 Q02241 Q02241 KIF23 Kinesin-like protein KIF23 MULTI-SECPEP 210214_Eclipse_Hela_QC 748.346801757812 2 748.83793 1495.66131 0.74432 0.00055738 0.053589 4.0129E-05 0.79791 0.00059751 748.837918983779 56.315 0.44841 56.315 56.068 56.517 0 12 8 2 0 0 0 0.016477 1 58680 75.294 65.341 1 3171400 644 1826 600 605 748 748 AEEATEAQEVVEATPEGACTEPR 23 Unmodified _AEEATEAQEVVEATPEGACTEPR_ 0 0 0 O75683 O75683 O75683 SURF6 Surfeit locus protein 6 MULTI-MSMS 210214_Eclipse_Hela_QC 1238.05908203125 2 1237.55301 2473.09148 2.1076 0.0026082 -0.27786 -0.00034386 1.8297 0.0022644 1238.05434366519 59.574 0.59612 59.574 59.254 59.85 0 38 11 5 0 0 0 2.2718E-42 1 63276 170.11 165.8 1 9738400 645 475 601 606 749 749 AEEDEILNR 9 Unmodified _AEEDEILNR_ 0 0 0 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 210214_Eclipse_Hela_QC 544.7646484375 2 544.76456 1087.51457 0.31223 0.00017009 -0.083869 -4.5689E-05 0.22836 0.0001244 544.764499176243 33.809 1.0307 33.809 33.427 34.458 0 72 20 5 0 0 0 1.85E-11 1 26633 180.93 158.19 1 196270000 646 1080 602 607 750 750 AEEDTQFNYHR 11 Unmodified _AEEDTQFNYHR_ 0 0 0 Q14683 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 470.540649414062 3 470.540862 1408.60076 -0.30719 -0.00014455 -0.092306 -4.3434E-05 -0.3995 -0.00018798 470.540820881611 24.147 0.32071 24.147 24.048 24.369 0 17 6 3 0 0 0 1.1425E-05 1 13070 94.297 90.975 1 13740000 647 2100 603 608 751 751 AEEDTQFNYHR 11 Unmodified _AEEDTQFNYHR_ 0 0 0 Q14683 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 705.809204101562 2 705.307655 1408.60076 0.25048 0.00017667 -0.22013 -0.00015526 0.030358 2.1412E-05 705.307498576679 24.147 0.32048 24.147 23.999 24.319 0 15 6 3 0 0 0 1.4711E-10 1 13090 135.83 126.05 1 11749000 648 2100 603 608 752 752 AEEDVEPECIMEK 13 Unmodified _AEEDVEPECIMEK_ 0 0 0 Q9UJU6 Q9UJU6 Q9UJU6 DBNL Drebrin-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 789.837280273438 2 789.836739 1577.65892 0.90462 0.0007145 -0.50305 -0.00039732 0.40158 0.00031718 789.836695884458 52.339 0.59705 52.339 51.996 52.593 0 43 11 5 0 0 0 1.8409E-06 1 53001 114.86 110.82 1 19370000 649 3896 604 609 753 753 AEEGIAAGGVMDVNTALQEVLK 22 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AEEGIAAGGVMDVNTALQEVLK_ 1 0 0 P25398 P25398 P25398 RPS12 40S ribosomal protein S12 MULTI-MSMS 210214_Eclipse_Hela_QC 1129.57531738281 2 1129.07266 2256.13076 1.2779 0.0014429 -0.52217 -0.00058956 0.75577 0.00085332 1129.57328541898 111.47 1.1848 111.47 111.3 112.48 0 98 23 7 0 0 0 1.0367E-159 1 135422 300.98 293.44 1 343520000 650 1042 605 610 754 754 AEEIANEMIEAAK 13 Unmodified _AEEIANEMIEAAK_ 0 0 0 P49588 P49588 P49588 AARS Alanine--tRNA ligase, cytoplasmic MULTI-MSMS 210214_Eclipse_Hela_QC 709.846130371094 2 709.845224 1417.6759 0.52422 0.00037212 -0.053394 -3.7901E-05 0.47083 0.00033422 709.84527439721 61.616 0.69685 61.616 61.342 62.039 0 24 13 2 0 0 0 0.0046912 1 66145 50.648 18.328 1 10628000 651 1377 606 611 755 755 AEEILEK 7 Unmodified _AEEILEK_ 0 0 0 P62913 P62913 P62913 RPL11 60S ribosomal protein L11 MULTI-MSMS 210214_Eclipse_Hela_QC 416.226226806641 2 416.226551 830.438549 0.26745 0.00011132 0.24756 0.00010304 0.515 0.00021436 416.226656126561 23.724 0.91812 23.724 23.501 24.419 0 44 18 5 0 0 0 0.0053689 1 12312 100.19 15.829 1 209740000 652 1696 607 612 756 756 AEEITIPADVTPEK 14 Unmodified _AEEITIPADVTPEK_ 0 0 0 Q8IXI1 Q8IXI1 Q8IXI1 RHOT2 Mitochondrial Rho GTPase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 756.894470214844 2 756.893229 1511.7719 0.34133 0.00025835 -0.22664 -0.00017154 0.11469 8.6807E-05 756.893539893675 64.324 0.45127 64.324 64.021 64.472 0 14 9 2 0 0 0 0.00020547 1 69981 70.977 53.113 1 4047900 653 2636 608 613 757 757 AEELGLPILGVLR 13 Unmodified _AEELGLPILGVLR_ 0 0 0 P09110 P09110 P09110 ACAA1 3-ketoacyl-CoA thiolase, peroxisomal MULTI-MSMS 210214_Eclipse_Hela_QC 690.417602539062 2 690.416477 1378.8184 1.1506 0.00079442 0.34967 0.00024142 1.5003 0.0010358 690.416789406063 106.94 0.29836 106.94 106.81 107.11 0 15 5 4 0 0 0 3.6753E-06 1 129272 111.65 109.13 1 19978000 654 768 609 614 758 758 AEELGQELK 9 Unmodified _AEELGQELK_ 0 0 0 Q14980 Q14980 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 508.767028808594 2 508.766571 1015.51859 0.16172 8.2276E-05 1.3784 0.00070127 1.5401 0.00078355 508.7669580547 30.298 0.79566 30.298 29.678 30.473 0 42 15 4 0 0 0 3.8108E-05 1 21280 124.98 49.129 1 50663000 655 2122 610 615 759 759 AEELHYPLGER 11 Unmodified _AEELHYPLGER_ 0 0 0 Q14257 Q14257 Q14257 RCN2 Reticulocalbin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 438.553924560547 3 438.554331 1312.64116 0.11947 5.2393E-05 0.018598 8.1564E-06 0.13806 6.0549E-05 438.554384403221 37.146 0.82966 37.146 36.766 37.596 0 45 16 4 0 0 0 0.001893 1 31476 53.967 47.268 1 23038000 656 2077 611 616 760 760 AEELHYPLGER 11 Unmodified _AEELHYPLGER_ 0 0 0 Q14257 Q14257 Q14257 RCN2 Reticulocalbin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 657.327331542969 2 657.327859 1312.64116 0.38133 0.00025066 0.042134 2.7696E-05 0.42347 0.00027836 657.327931788579 37.12 0.68378 37.12 36.912 37.596 0 24 13 3 0 0 0 0.00079967 1 31492 77.192 66.04 1 5327100 657 2077 611 616 761 761 AEELLAEEK 9 Unmodified _AEELLAEEK_ 0 0 0 O00429 O00429 O00429 DNM1L Dynamin-1-like protein MULTI-SECPEP 210214_Eclipse_Hela_QC 516.649230957031 2 516.266404 1030.51826 0.38075 0.00019657 -0.8924 -0.00046071 -0.51165 -0.00026415 516.266230406803 30.467 1.0961 30.467 29.976 31.072 0 31 21 2 0 0 0 0.0060541 1 22034 124.23 101.49 1 15113000 658 159 612 617 762 762 AEELVLER 8 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AEELVLER_ 1 0 0 P21980 P21980 P21980 TGM2 Protein-glutamine gamma-glutamyltransferase 2 MULTI-SECPEP 210214_Eclipse_Hela_QC 1001.16979980469 1 1000.53095 999.523675 0.80045 0.00080087 0.73718 0.00073758 1.5376 0.0015384 1000.53220050543 80.031 0.79617 80.031 79.463 80.259 0 32 15 3 0 0 0 0.0037008 1 92043 121.62 109.13 1 10808000 659 1001 613 618 763 763 AEEMDTEDRPEASGVDTEPR 20 Unmodified _AEEMDTEDRPEASGVDTEPR_ 0 0 1 Q8N3D4 Q8N3D4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 745.656372070312 3 745.321971 2232.94408 0.7633 0.0005689 -0.24196 -0.00018034 0.52134 0.00038856 745.656103596991 32.924 0.52112 32.924 32.71 33.231 0 24 10 3 0 0 0 0.0003055 1 25557 57.482 54.042 1 5390500 660 2679 614 619 764 764 AEEQPQVELFVK 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AEEQPQVELFVK_ 1 0 0 O00299 O00299 O00299 CLIC1 Chloride intracellular channel protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 729.880310058594 2 729.877382 1457.74021 1.9083 0.0013929 0.82853 0.00060472 2.7369 0.0019976 729.878652745856 93.612 1.9388 93.612 92.544 94.483 0 119 38 6 0 0 0 2.8077E-08 1 110620 121.8 103.12 1 86446000 661 148 615 620 765 765 AEETSSPVIGELWSPDQTAEASHVSR 26 Unmodified _AEETSSPVIGELWSPDQTAEASHVSR_ 0 0 0 Q86XL3 Q86XL3 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 928.776489257812 3 928.442137 2782.30458 1.1109 0.0010314 1.3108 0.001217 2.4217 0.0022484 929.447167454027 77.04 0.69695 77.04 76.726 77.423 0 32 13 4 0 0 0 0.045626 1 87892 15.055 8.5504 1 2767700 662 2602 616 621 766 766 AEEVATFFAK 10 Unmodified _AEEVATFFAK_ 0 0 0 P11387 P11387 P11387 TOP1 DNA topoisomerase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 556.785400390625 2 556.784764 1111.55498 0.44367 0.00024703 -0.11634 -6.4776E-05 0.32733 0.00018225 556.78471442441 59.362 1.094 59.362 58.806 59.9 0 58 21 4 0 0 0 0.00016225 1 62922 102.62 81.997 1 33088000 663 831 617 622 767 767 AEEVELYLEK 10 Unmodified _AEEVELYLEK_ 0 0 0 Q8NBN3 Q8NBN3 Q8NBN3 TMEM87A Transmembrane protein 87A MULTI-MSMS 210214_Eclipse_Hela_QC 612.315246582031 2 611.813719 1221.61288 0.60997 0.00037319 0.2309 0.00014127 0.84087 0.00051446 611.813831710659 59.526 0.54643 59.526 59.154 59.7 0 16 10 2 0 0 0 0.00042325 2 63148 89.247 58.174 1 4584600 664 2731 618 623 768;769 768 AEEVQAWAQR 10 Unmodified _AEEVQAWAQR_ 0 0 0 Q9BYN8 Q9BYN8 Q9BYN8 MRPS26 28S ribosomal protein S26, mitochondrial MULTI-SECPEP 210214_Eclipse_Hela_QC 593.644104003906 2 594.293819 1186.57309 0.7941 0.00047193 -0.55951 -0.00033251 0.23459 0.00013941 594.293438518401 34.804 0.45591 34.804 34.539 34.995 0 15 9 2 0 0 0 0.041713 1 28096 71.501 56.241 1 6588600 665 3364 619 624 770 770 AEEWGVQYVETSAK 14 Unmodified _AEEWGVQYVETSAK_ 0 0 0 P11234 P11234 P11234 RALB Ras-related protein Ral-B MULTI-MSMS 210214_Eclipse_Hela_QC 799.383117675781 2 798.880652 1595.74675 1.4345 0.001146 0.13592 0.00010858 1.5705 0.0012546 798.880224592372 63.75 0.59732 63.75 63.473 64.071 0 33 11 4 0 0 0 0.00028766 1 69146 68.536 61.647 1 5927000 666 827 620 625 771 771 AEEYEFLTPVEEAPK 15 Unmodified _AEEYEFLTPVEEAPK_ 0 0 0 P52565 P52565 P52565 ARHGDIA Rho GDP-dissociation inhibitor 1 MULTI-MSMS 210214_Eclipse_Hela_QC 876.926391601562 2 876.42235 1750.83015 1.1105 0.00097328 0.87999 0.00077124 1.9905 0.0017445 876.422522295855 79.602 0.89574 79.602 79.165 80.06 0 95 17 7 0 0 0 0.00023846 2 90975 83.314 73.522 1 326380000 667 1472 621 626 772;773 772 AEEYTEETEEREESTTGFDK 20 Unmodified _AEEYTEETEEREESTTGFDK_ 0 0 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 794.671813964844 3 794.003073 2378.98739 0.84729 0.00067275 0.15754 0.00012509 1.0048 0.00079784 794.337554459966 39.088 0.51685 39.088 38.785 39.302 0 38 10 5 0 0 0 1.1816E-06 1 34217 92.993 92.231 1 29688000 668 4021 622 627 774 774 AEFEDQDDEAR 11 Unmodified _AEFEDQDDEAR_ 0 0 0 Q14692 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 662.767883300781 2 662.768028 1323.5215 0.86518 0.00057341 -0.47152 -0.00031251 0.39366 0.0002609 662.767823140546 23.704 0.39815 23.704 23.551 23.949 0 16 7 3 0 0 0 0.0011062 1 12410 68.657 65.394 1 5363100 669 2104 623 628 775 775 AEFEVHEVYAVDVLVSSGEGK 21 Unmodified _AEFEVHEVYAVDVLVSSGEGK_ 0 0 0 Q9UQ80 Q9UQ80 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 MULTI-MSMS 210214_Eclipse_Hela_QC 755.378601074219 3 755.374224 2263.10084 1.2943 0.00097769 1.0775 0.00081395 2.3718 0.0017916 755.709074407049 90.806 2.2379 90.806 90.206 92.444 0 121 44 4 0 0 0 8.4794E-05 5 107471 57.989 54.751 1 6426700 670 3978 624 629 776;777;778;779;780 779 AEFEVHEVYAVDVLVSSGEGK 21 Unmodified _AEFEVHEVYAVDVLVSSGEGK_ 0 0 0 Q9UQ80 Q9UQ80 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 MSMS 210214_Eclipse_Hela_QC 755.374328613281 3 755.374224 2263.10084 NaN NaN NaN NaN NaN NaN NaN 91.74 1 91.74 91.24 92.24 0 0 0 0 0.0012411 1 108164 51.348 47.161 1 671 3978 624 629 781 781 AEFFADVVPAVR 12 Unmodified _AEFFADVVPAVR_ 0 0 0 Q9UHY7 Q9UHY7 Q9UHY7 ENOPH1 Enolase-phosphatase E1 MULTI-MSMS 210214_Eclipse_Hela_QC 660.851501464844 2 660.85097 1319.68739 0.58822 0.00038873 0.057128 3.7753E-05 0.64535 0.00042648 660.850983035555 86.662 0.69576 86.662 86.339 87.035 0 34 13 3 0 0 0 0.0046158 1 100994 51.927 38.157 1 7580600 672 3877 625 630 782 782 AEFGDFDIK 9 Unmodified _AEFGDFDIK_ 0 0 0 Q8IWS0 Q8IWS0 Q8IWS0 PHF6 PHD finger protein 6 MULTI-MSMS 210214_Eclipse_Hela_QC 521.74951171875 2 521.248015 1040.48148 0.031297 1.6314E-05 0.66542 0.00034685 0.69672 0.00036316 521.24823874504 65.914 0.69676 65.914 65.552 66.249 0 31 13 3 0 0 0 0.007425 1 72050 58.981 46.625 1 16048000 673 2626 626 631 783 783 AEFGPPGPGAGSR 13 Unmodified _AEFGPPGPGAGSR_ 0 0 0 Q9H4A4 Q9H4A4 Q9H4A4 RNPEP Aminopeptidase B MULTI-MSMS 210214_Eclipse_Hela_QC 600.293823242188 2 600.293819 1198.57309 0.7646 0.00045898 1.4982 0.00089933 2.2627 0.0013583 600.294046042472 31.934 1.1897 31.934 31.321 32.511 0 82 23 5 0 0 0 3.0001E-06 1 24121 112.83 95.737 1 21822000 674 3467 627 632 784 784 AEFSAGAWSEPR 12 Unmodified _AEFSAGAWSEPR_ 0 0 0 Q8N6S5 Q8N6S5 Q8N6S5 ARL6IP6 ADP-ribosylation factor-like protein 6-interacting protein 6 MULTI-MSMS 210214_Eclipse_Hela_QC 654.304870605469 2 654.304384 1306.59421 0.9534 0.00062382 -0.25777 -0.00016866 0.69564 0.00045516 654.304661507001 53.564 0.44817 53.564 53.291 53.74 0 15 8 2 0 0 0 0.00225 1 54775 67.726 63.571 1 2313500 675 2703 628 633 785 785 AEFTSPPSLFK 11 Unmodified _AEFTSPPSLFK_ 0 0 0 Q6UN15 Q6UN15 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 MULTI-MSMS 210214_Eclipse_Hela_QC 612.8203125 2 612.318971 1222.62339 1.1388 0.00069732 0.3585 0.00021952 1.4973 0.00091683 612.319112630043 70.197 0.49799 70.197 69.924 70.422 0 29 9 4 0 0 0 0.0056726 1 78097 52.579 46.544 1 9780600 676 2474 629 634 786 786 AEFTVETR 8 Unmodified _AEFTVETR_ 0 0 0 P21333 P21333 P21333 FLNA Filamin-A MULTI-MSMS 210214_Eclipse_Hela_QC 476.742218017578 2 476.740357 951.46616 -0.10422 -4.9686E-05 -2.7879 -0.0013291 -2.8921 -0.0013788 476.740732984198 30.255 0.64708 30.255 29.926 30.573 0 33 12 4 0 0 0 0.0027499 1 21721 98.458 60.325 1 11058000 677 995 630 635 787 787 AEFVEVTK 8 Unmodified _AEFVEVTK_ 0 0 0 CON__P02769 CON__P02769 CON__P02769 MULTI-MSMS 210214_Eclipse_Hela_QC 461.747131347656 2 461.74765 921.480748 0.064163 2.9627E-05 0.063532 2.9336E-05 0.12769 5.8963E-05 461.747468669533 32.677 1.8543 32.677 32.261 34.116 0 126 37 7 0 0 0 0.0034501 2 25038 87.181 47.078 1 358960000 + 678 55 631 636 788;789 788 AEGDVAALNR 10 Unmodified _AEGDVAALNR_ 0 0 0 P67936 P67936 P67936 TPM4 Tropomyosin alpha-4 chain MULTI-MSMS 210214_Eclipse_Hela_QC 508.262237548828 2 508.261988 1014.50942 0.26057 0.00013244 0.02491 1.2661E-05 0.28548 0.0001451 508.262049826621 25.816 1.0451 25.816 25.512 26.557 0 40 20 3 0 0 0 9.6657E-26 1 15338 211.79 151.2 1 133470000 679 1726 632 637 790 790 AEGEWEDQEALDYFSDK 17 Unmodified _AEGEWEDQEALDYFSDK_ 0 0 0 Q9NYF8 Q9NYF8 Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1016.93334960938 2 1016.42635 2030.83815 1.1712 0.0011904 -0.48211 -0.00049003 0.68907 0.00070039 1016.92731161698 88.079 0.59704 88.079 87.632 88.229 0 27 11 3 0 0 0 0.058353 1 103008 27.34 24.018 1 6476900 680 3741 633 638 791 791 AEGFVDALHR 10 Unmodified _AEGFVDALHR_ 0 0 0 Q96I24 Q96I24 Q96I24 FUBP3 Far upstream element-binding protein 3 MSMS 210214_Eclipse_Hela_QC 557.78369140625 2 557.78563 1113.55671 NaN NaN NaN NaN NaN NaN NaN 38.574 1 38.574 38.074 39.074 0 0 0 0 0.0022178 1 33635 94.692 68.09 1 681 3060 634 639 792 792 AEGGAADLDTQR 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AEGGAADLDTQR_ 1 0 0 Q9Y4E8 Q9Y4E8 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 MULTI-MSMS 210214_Eclipse_Hela_QC 623.790161132812 2 623.288931 1244.56331 0.29163 0.00018177 0.67969 0.00042364 0.97132 0.00060541 623.289418882691 42.426 0.54726 42.426 42.199 42.746 0 14 10 2 0 0 0 0.0012258 1 39090 53.569 35.749 1 5034100 682 4087 635 640 793 793 AEGGYFGQIR 10 Unmodified _AEGGYFGQIR_ 0 0 0 Q8NI27 Q8NI27 Q8NI27 THOC2 THO complex subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 549.272277832031 2 549.272355 1096.53016 0.51028 0.00028028 0.98645 0.00054183 1.4967 0.00082211 549.774403455463 43.974 0.59724 43.974 43.792 44.389 0 30 11 3 0 0 0 0.012853 1 41383 50.04 24.303 1 14022000 683 2780 636 641 794 794 AEGIPVEMVVIGDDSAFTVLK 21 Unmodified _AEGIPVEMVVIGDDSAFTVLK_ 0 0 0 Q3LXA3 Q3LXA3 Q3LXA3 DAK Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) MULTI-MSMS 210214_Eclipse_Hela_QC 1096.07385253906 2 1095.57176 2189.12897 0.84504 0.0009258 0.45248 0.00049572 1.2975 0.0014215 1096.07378748741 107.98 0.24956 107.98 107.86 108.11 0 15 4 4 0 0 0 7.0277E-07 1 130639 89.541 84.225 1 31062000 684 2278 637 642 795 795 AEGLDLASCVR 11 Unmodified _AEGLDLASCVR_ 0 0 0 Q8NHQ9 Q8NHQ9 Q8NHQ9 DDX55 ATP-dependent RNA helicase DDX55 MULTI-MSMS 210214_Eclipse_Hela_QC 595.796203613281 2 595.795337 1189.57612 1.206 0.00071855 0.18427 0.00010979 1.3903 0.00082833 595.795509772091 53.615 0.39845 53.615 53.441 53.839 0 10 7 2 0 0 0 0.021264 1 55033 42.348 18.194 1 2169000 685 2775 638 643 796 796 AEGLQVGQDAR 11 Unmodified _AEGLQVGQDAR_ 0 0 0 Q8WWM7 Q8WWM7 Q8WWM7 ATXN2L Ataxin-2-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 572.79150390625 2 572.291276 1142.568 0.51121 0.00029256 -1.2554 -0.00071847 -0.74421 -0.0004259 572.791498740343 25.807 0.4469 25.807 25.611 26.058 0 18 8 3 0 0 0 0.00076668 2 15500 73.233 51.046 1 9067000 686 2852 639 644 797;798 798 AEGPEVDVNLPK 12 Unmodified _AEGPEVDVNLPK_ 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 210214_Eclipse_Hela_QC 634.781311035156 2 634.330067 1266.64558 0.54709 0.00034703 0.15904 0.00010088 0.70613 0.00044792 634.330122343278 54.849 0.93938 54.849 54.333 55.272 0 69 18 5 0 0 0 9.1106E-18 2 56600 171.87 132.32 1 221190000 687 1896 640 645 799;800 800 AEGPQEWVFQECK 13 Unmodified _AEGPQEWVFQECK_ 0 0 0 P14735 P14735 P14735 IDE Insulin-degrading enzyme MULTI-MSMS 210214_Eclipse_Hela_QC 804.863159179688 2 804.361573 1606.70859 0.50315 0.00040471 -0.49743 -0.00040012 0.0057171 4.5986E-06 804.36109647221 67.332 0.66418 67.332 66.996 67.66 0 32 13 3 0 0 0 0.00026667 2 74049 72.434 68.417 1 7793600 688 887 641 646 801;802 801 AEGPVAVVVNGHTEGPAPAR 20 Unmodified _AEGPVAVVVNGHTEGPAPAR_ 0 0 0 Q86UK7 Q86UK7 Q86UK7 ZNF598 Zinc finger protein 598 MULTI-MSMS 210214_Eclipse_Hela_QC 643.336791992188 3 643.337668 1926.99117 0.62273 0.00040063 -0.1862 -0.00011979 0.43653 0.00028084 643.337162061677 44.084 0.74644 44.084 43.643 44.389 0 32 14 4 0 0 0 0.037569 1 41296 20.154 16.827 1 5335300 689 2579 642 647 803 803 AEGSDVANAVLDGADCIMLSGETAK 25 Unmodified _AEGSDVANAVLDGADCIMLSGETAK_ 0 0 0 P14618 P14618 P14618 PKM Pyruvate kinase PKM MULTI-MSMS 210214_Eclipse_Hela_QC 1248.07983398438 2 1247.57544 2493.13632 2.0579 0.0025673 -0.19127 -0.00023862 1.8666 0.0023287 1248.0770082734 91.027 0.54692 91.027 90.753 91.3 0 35 10 4 0 0 0 6.577E-18 1 107065 123.42 111.44 1 12678000 690 882 643 648 804 804 AEGSDVANAVLDGADCIMLSGETAK 25 Unmodified _AEGSDVANAVLDGADCIMLSGETAK_ 0 0 0 P14618 P14618 P14618 PKM Pyruvate kinase PKM MULTI-MSMS 210214_Eclipse_Hela_QC 1248.08166503906 2 1247.57544 2493.13632 1.3813 0.0017233 -2.6296 -0.0032806 -1.2483 -0.0015573 1248.07349547249 106 0.9465 106 105.63 106.57 0 92 18 9 0 0 0 5.8045E-137 1 127825 274.47 262.56 1 3335700000 691 882 643 648 805 805 AEGSDVANAVLDGADCIMLSGETAK 25 Unmodified _AEGSDVANAVLDGADCIMLSGETAK_ 0 0 0 P14618 P14618 P14618 PKM Pyruvate kinase PKM MULTI-MSMS 210214_Eclipse_Hela_QC 832.387329101562 3 832.052716 2493.13632 0.7272 0.00060507 -1.0888 -0.00090591 -0.36157 -0.00030085 832.385947210534 106 0.59803 106 105.58 106.17 0 30 11 6 0 0 0 9.0928E-85 1 127907 178.11 174.62 1 60516000 692 882 643 648 806 806 AEGSDVANAVLDGADCIMLSGETAK 25 Oxidation (M) _AEGSDVANAVLDGADCIM(Oxidation (M))LSGETAK_ AEGSDVANAVLDGADCIM(1)LSGETAK AEGSDVANAVLDGADCIM(99)LSGETAK 0 1 0 P14618 P14618 P14618 PKM Pyruvate kinase PKM MULTI-MSMS 210214_Eclipse_Hela_QC 1256.08081054688 2 1255.57289 2509.13123 2.3597 0.0029627 -0.11284 -0.00014168 2.2468 0.002821 1256.07460360086 92.735 0.89481 92.735 92.444 93.339 0 78 17 6 0 0 0 4.1951E-10 1 109392 99.344 88.074 1 24447000 693 882 643 649 807 807 224 AEGSDVANAVLDGADCIMLSGETAK 25 Oxidation (M) _AEGSDVANAVLDGADCIM(Oxidation (M))LSGETAK_ AEGSDVANAVLDGADCIM(1)LSGETAK AEGSDVANAVLDGADCIM(170)LSGETAK 0 1 0 P14618 P14618 P14618 PKM Pyruvate kinase PKM MULTI-MSMS 210214_Eclipse_Hela_QC 1256.07507324219 2 1255.57289 2509.13123 1.3877 0.0017423 -1.1421 -0.001434 0.24554 0.0003083 1256.0736407525 106 0.44847 106 105.77 106.22 0 26 8 5 0 0 0 1.2858E-42 2 127913 174.35 166.17 1 64528000 694 882 643 649 808;809 808 224 AEGSEAAELAEIYAK 15 Unmodified _AEGSEAAELAEIYAK_ 0 0 0 Q9NUQ8 Q9NUQ8 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 MULTI-MSMS 210214_Eclipse_Hela_QC 776.380432128906 2 776.380485 1550.74642 1.2221 0.00094879 -0.4008 -0.00031118 0.82126 0.00063761 776.380021964315 71.932 0.79631 71.932 71.368 72.164 0 34 15 3 0 0 0 6.1661E-05 1 80403 106.49 85.12 1 9899700 695 3663 644 650 810 810 AEGSSTASSGSQLAEGK 17 Unmodified _AEGSSTASSGSQLAEGK_ 0 0 0 Q9NZB2 Q9NZB2 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 784.368041992188 2 783.865731 1565.71691 0.96975 0.00076016 0.055741 4.3693E-05 1.0255 0.00080385 783.865727076783 20.38 0.34884 20.38 20.214 20.563 0 20 6 4 0 0 0 7.9197E-05 1 7638 81.565 75.182 1 9312400 696 3760 645 651 811 811 AEGYAEGDLTLYHR 14 Unmodified _AEGYAEGDLTLYHR_ 0 0 0 Q8IY81 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 210214_Eclipse_Hela_QC 532.254516601562 3 532.254722 1593.74234 0.43596 0.00023204 0.23219 0.00012359 0.66816 0.00035563 532.254706228161 48.656 0.72942 48.656 48.358 49.088 0 36 14 4 0 0 0 4.4715E-05 1 47737 84.297 80.126 1 15966000 697 2645 646 652 812 812 AEHASSLLELASTTK 15 Unmodified _AEHASSLLELASTTK_ 0 0 0 Q5T4S7 Q5T4S7 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 MULTI-MSMS 210214_Eclipse_Hela_QC 519.942687988281 3 519.942144 1556.8046 0.77793 0.00040448 -0.029676 -1.543E-05 0.74825 0.00038905 519.942141355325 53.837 0.44801 53.837 53.59 54.038 0 15 8 3 0 0 0 0.031224 1 55254 27.813 11.676 1 3910800 698 2358 647 653 813 813 AEHDSILAEK 10 Unmodified _AEHDSILAEK_ 0 0 0 P26639 P26639 P26639 TARS Threonine--tRNA ligase, cytoplasmic MSMS 210214_Eclipse_Hela_QC 556.782775878906 2 556.782753 1111.55095 NaN NaN NaN NaN NaN NaN NaN 21.442 1 21.442 20.942 21.942 0 0 0 0 8.8212E-74 1 9152 264.3 142.12 1 699 1063 648 654 814 814 AEHQVGEDGFLLK 13 Unmodified _AEHQVGEDGFLLK_ 0 0 0 P51692;P42229 P51692 P51692 STAT5B;STAT5A Signal transducer and activator of transcription 5B;Signal transducer and activator of transcription 5A MULTI-MSMS 210214_Eclipse_Hela_QC 481.915191650391 3 481.580658 1441.72014 0.82065 0.00039521 0.14608 7.035E-05 0.96673 0.00046556 481.580801599857 45.19 0.59685 45.19 44.886 45.483 0 27 11 3 0 0 0 0.0037781 1 42950 32.932 29.207 1 7890800 700 1452 649 655 815 815 AEIDLVCELAK 11 Unmodified _AEIDLVCELAK_ 0 0 0 Q6UB35 Q6UB35 Q6UB35 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 630.829345703125 2 630.828846 1259.64314 1.1581 0.00073054 -0.14024 -8.8465E-05 1.0178 0.00064208 630.828899739152 79.257 0.94534 79.257 78.916 79.861 0 53 18 4 0 0 0 0.0013761 1 90765 67.334 38.607 1 8000400 701 2473 650 656 816 816 AEIDMLDIR 9 Unmodified _AEIDMLDIR_ 0 0 0 P09525 P09525 P09525 ANXA4 Annexin A4 MULTI-MSMS 210214_Eclipse_Hela_QC 538.276123046875 2 538.276249 1074.53795 1.1723 0.00063101 -0.0060715 -3.2681E-06 1.1662 0.00062775 538.276282191362 72.857 0.59753 72.857 72.513 73.11 0 36 11 4 0 0 0 0.0034075 1 81743 69.423 49.72 1 12636000 702 777 651 657 817 817 AEIGIAMGSGTAVAK 15 Unmodified _AEIGIAMGSGTAVAK_ 0 0 0 P16615;O14983;Q93084 P16615 P16615 ATP2A2;ATP2A1;ATP2A3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 MULTI-MSMS 210214_Eclipse_Hela_QC 688.367065429688 2 688.366127 1374.7177 1.1135 0.00076648 -0.8172 -0.00056253 0.29627 0.00020394 688.365477801922 53.569 0.94627 53.569 53.142 54.088 0 48 15 5 0 0 0 5.4536E-07 1 54944 105.17 68.837 1 18138000 703 922 652 658 818 818 AEILSEMR 8 Unmodified _AEILSEMR_ 0 0 0 Q9Y6K5 Q9Y6K5 Q9Y6K5 OAS3 2-5-oligoadenylate synthase 3 MULTI-MSMS 210214_Eclipse_Hela_QC 474.744842529297 2 474.744585 947.474617 -0.11376 -5.4007E-05 0.81047 0.00038477 0.69671 0.00033076 474.744854543573 40.751 0.8952 40.751 40.462 41.357 0 42 17 4 0 0 0 0.053872 1 36889 40.268 14.09 1 4035100 704 4158 653 659 819 819 AEIMESIK 8 Unmodified _AEIMESIK_ 0 0 0 Q14683 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 460.741333007812 2 460.741511 919.468469 0.036718 1.6917E-05 0.36863 0.00016984 0.40535 0.00018676 460.74163825779 35.421 0.59561 35.421 35.094 35.69 0 27 11 3 0 0 0 0.0037072 1 29084 85.212 27.931 1 12590000 705 2100 654 660 820 820 AEINILLCGDPGTSK 15 Unmodified _AEINILLCGDPGTSK_ 0 0 0 P33991 P33991 P33991 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 210214_Eclipse_Hela_QC 794.40673828125 2 794.40598 1586.79741 1.0267 0.00081565 0.6428 0.00051065 1.6695 0.0013263 794.907510356143 75.327 1.0468 75.327 74.604 75.651 0 30 20 2 0 0 0 0.00018136 2 85241 72.496 37.082 1 14974000 706 1168 655 661 821;822 821 AEIQELAMVPR 11 Unmodified _AEIQELAMVPR_ 0 0 0 P24928 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 MSMS 210214_Eclipse_Hela_QC 628.8388671875 2 628.837005 1255.65946 NaN NaN NaN NaN NaN NaN NaN 67.895 1 67.895 67.395 68.395 0 0 0 0 0.020596 1 74995 54.191 35.929 1 707 1038 656 662 823 823 AEISELPSIVQDLANGNITWADVEAR 26 Unmodified _AEISELPSIVQDLANGNITWADVEAR_ 0 0 0 P41250 P41250 P41250 GARS Glycine--tRNA ligase MULTI-MSMS 210214_Eclipse_Hela_QC 1406.71801757812 2 1406.2116 2810.40865 2.8869 0.0040596 0.63058 0.00088673 3.5175 0.0049463 1406.71354129848 109.86 0.29939 109.86 109.75 110.05 0 18 5 5 0 0 0 1.4563E-45 1 133243 182.15 175.74 1 9947400 708 1260 657 663 824 824 AEISFEDR 8 Unmodified _AEISFEDR_ 0 0 0 P21333 P21333 P21333 FLNA Filamin-A MULTI-MSMS 210214_Eclipse_Hela_QC 483.729766845703 2 483.729989 965.445425 -0.16038 -7.7582E-05 -0.29391 -0.00014217 -0.45429 -0.00021976 483.729828991441 35.727 0.97989 35.727 35.293 36.273 0 63 19 5 0 0 0 0.0016433 1 29571 109.36 66.111 1 69721000 709 995 658 664 825 825 AEISFEDRK 9 Unmodified _AEISFEDRK_ 0 0 1 P21333 P21333 P21333 FLNA Filamin-A MSMS 210214_Eclipse_Hela_QC 547.778198242188 2 547.77747 1093.54039 NaN NaN NaN NaN NaN NaN NaN 23.883 1 23.883 23.383 24.383 0 0 0 0 6.9127E-06 1 12660 153.08 102.38 1 710 995 659 665 826 826 AEISGVQGSETQVLR 15 Unmodified _AEISGVQGSETQVLR_ 0 0 0 Q8N3D4 Q8N3D4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 787.412780761719 2 787.412651 1572.81075 0.88029 0.00069315 0.0014088 1.1093E-06 0.8817 0.00069426 787.412762323691 48.69 0.33204 48.69 48.457 48.789 0 9 6 2 0 0 0 0.00085697 2 47985 54.471 27.142 1 2275800 711 2679 660 666 827;828 827 AEISNAIDQYVTGTIGEDEDLIK 23 Unmodified _AEISNAIDQYVTGTIGEDEDLIK_ 0 0 0 P31939 P31939 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase MULTI-MSMS 210214_Eclipse_Hela_QC 1248.1171875 2 1247.6134 2493.21224 1.8123 0.0022611 -0.007893 -9.8474E-06 1.8044 0.0022512 1248.1146634566 106.55 0.2452 106.55 106.42 106.67 0 9 4 4 0 0 0 1.8672E-12 1 128721 102.65 97.935 1 52820000 712 1148 661 667 829 829 AEITDAEGLGLK 12 Unmodified _AEITDAEGLGLK_ 0 0 0 Q14203 Q14203 Q14203 DCTN1 Dynactin subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 608.824768066406 2 608.824618 1215.63468 0.8437 0.00051367 0.0023801 1.4491E-06 0.84608 0.00051511 608.824565522379 57.287 0.49791 57.287 57.014 57.512 0 23 9 3 0 0 0 0.0019524 1 59987 58.37 32.811 1 11742000 713 2069 662 668 830 830 AEITFDDHK 9 Unmodified _AEITFDDHK_ 0 0 0 O75369 O75369 O75369 FLNB Filamin-B MULTI-MSMS 210214_Eclipse_Hela_QC 538.7919921875 2 538.256371 1074.49819 -0.1953 -0.00010512 0.12377 6.6619E-05 -0.071528 -3.8501E-05 538.256392277185 24.84 0.5956 24.84 24.667 25.263 0 29 11 4 0 0 0 1.2624E-05 2 14040 133.58 123.99 1 89212000 714 445 663 669 831;832 831 AEITLVATKPEK 12 Unmodified _AEITLVATKPEK_ 0 0 1 Q9UBF2 Q9UBF2 Q9UBF2 COPG2 Coatomer subunit gamma-2 MULTI-MSMS 210214_Eclipse_Hela_QC 650.379699707031 2 650.37956 1298.74457 0.45231 0.00029417 0.11064 7.1959E-05 0.56295 0.00036613 650.37965280326 31.72 0.34801 31.72 31.47 31.818 0 12 6 2 0 0 0 0.0070153 1 23813 70.977 53.113 1 4607100 715 3816 664 670 833 833 AELADQAASWLTR 13 Unmodified _AELADQAASWLTR_ 0 0 0 CON__ENSEMBL:ENSBTAP00000007350;CON__P01030 CON__ENSEMBL:ENSBTAP00000007350;CON__P01030 CON__ENSEMBL:ENSBTAP00000007350 MULTI-MSMS 210214_Eclipse_Hela_QC 716.867553710938 2 716.364973 1430.71539 0.32148 0.0002303 0.90258 0.00064658 1.2241 0.00087688 716.365378943855 80.074 0.99459 80.074 79.513 80.507 0 58 19 4 0 0 0 1.186E-08 1 91673 145.55 133.51 1 54815000 + 716 33;47 665 671 834 834 AELAELPLR 9 Unmodified _AELAELPLR_ 0 0 0 Q96QK1 Q96QK1 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 MULTI-MSMS 210214_Eclipse_Hela_QC 506.295166015625 2 506.295299 1010.57605 0.064846 3.2831E-05 0.2638 0.00013356 0.32865 0.00016639 506.295337697924 61.516 0.64676 61.516 61.193 61.84 0 30 12 3 0 0 0 0.00013831 1 65995 114.89 50.63 1 26070000 717 3119 666 672 835 835 AELANIER 8 Unmodified _AELANIER_ 0 0 0 Q9H2G2 Q9H2G2 Q9H2G2 SLK STE20-like serine/threonine-protein kinase MULTI-MSMS 210214_Eclipse_Hela_QC 458.248565673828 2 458.248349 914.482145 0.26275 0.0001204 -0.25906 -0.00011871 0.0036871 1.6896E-06 458.248416862019 28.153 0.63261 28.153 27.892 28.525 0 21 12 3 0 0 0 0.0032521 1 18830 90.37 42.521 1 6414600 718 3438 667 673 836 836 AELCPLAEELSCSICLEPFK 20 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AELCPLAEELSCSICLEPFK_ 1 0 0 Q14258 Q14258 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 MULTI-MSMS 210214_Eclipse_Hela_QC 1205.06555175781 2 1204.56275 2407.11096 1.6813 0.0020252 0.03653 4.4003E-05 1.7178 0.0020692 1205.06440098963 112.55 0.2984 112.55 112.43 112.73 0 16 5 4 0 0 0 1.7952E-20 1 136927 141 136.2 1 15796000 719 2078 668 674 837 837 AELDDTPMR 9 Oxidation (M) _AELDDTPM(Oxidation (M))R_ AELDDTPM(1)R AELDDTPM(49)R 0 1 0 P23246 P23246 P23246 SFPQ Splicing factor, proline- and glutamine-rich MULTI-MSMS 210214_Eclipse_Hela_QC 532.239685058594 2 532.239864 1062.46517 0.11345 6.0383E-05 -1.0964 -0.00058356 -0.98297 -0.00052318 532.239513742701 21.58 0.34895 21.58 21.41 21.759 0 13 6 3 0 0 0 0.047809 1 9413 49.418 32.878 1 3632600 720 1018 669 675 838 838 255 AELDDTPMR 9 Oxidation (M) _AELDDTPM(Oxidation (M))R_ AELDDTPM(1)R AELDDTPM(61)R 0 1 0 P23246 P23246 P23246 SFPQ Splicing factor, proline- and glutamine-rich MULTI-MSMS 210214_Eclipse_Hela_QC 532.240478515625 2 532.239864 1062.46517 0.18061 9.6129E-05 0.19614 0.00010439 0.37675 0.00020052 532.239967957321 31.312 0.3984 31.312 31.022 31.421 0 14 7 2 0 0 0 0.017504 1 23288 60.59 44.387 1 5401600 721 1018 669 675 839 839 255 AELDGTILK 9 Unmodified _AELDGTILK_ 0 0 0 Q8WXF1 Q8WXF1 Q8WXF1 PSPC1 Paraspeckle component 1 MULTI-MSMS 210214_Eclipse_Hela_QC 480.273712158203 2 480.274032 958.533512 0.25736 0.0001236 0.098323 4.7222E-05 0.35568 0.00017083 480.273981888776 48.004 0.5474 48.004 47.672 48.22 0 18 10 2 0 0 0 0.011865 1 46902 52.482 20.354 1 3570200 722 2860 670 676 840 840 AELDNELMEGK 11 Unmodified _AELDNELMEGK_ 0 0 0 Q13523 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 624.793334960938 2 624.79246 1247.57037 0.55292 0.00034546 0.56049 0.00035019 1.1134 0.00069565 624.792595581272 48.687 0.4812 48.687 48.457 48.938 0 16 9 2 0 0 0 7.8681E-05 1 48041 99.815 77.729 1 7055500 723 2003 671 677 841 841 AELEALGMK 9 Unmodified _AELEALGMK_ 0 0 0 Q9BW71 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 481.255554199219 2 481.254785 960.495018 0.67946 0.000327 0.22767 0.00010957 0.90713 0.00043656 481.254836324988 47.433 0.89531 47.433 46.777 47.672 0 22 17 2 0 0 0 0.01859 1 46148 49.418 21.244 1 3024000 724 3325 672 678 842 842 AELEIQK 7 Unmodified _AELEIQK_ 0 0 0 P07741 P07741 P07741 APRT Adenine phosphoribosyltransferase MULTI-MSMS 210214_Eclipse_Hela_QC 416.235748291016 2 415.734543 829.454533 -1.0419 -0.00043317 0.60132 0.00024999 -0.44062 -0.00018318 415.734735466476 25.189 0.29807 25.189 25.015 25.313 0 13 5 3 0 0 0 0.0056857 1 14569 97.602 7.8984 1 37217000 725 727 673 679 843 843 AELEQHLEQEQEFQVNK 17 Unmodified _AELEQHLEQEQEFQVNK_ 0 0 0 Q16204 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 MULTI-MSMS 210214_Eclipse_Hela_QC 700.673706054688 3 700.339514 2097.99671 1.3863 0.00097085 0.47545 0.00033298 1.8617 0.0013038 700.339754305165 50.154 0.69685 50.154 49.881 50.578 0 35 13 4 0 0 0 0.0001568 2 49947 61.127 57.633 1 14346000 726 2225 674 680 844;845 845 AELFQQEQQSADK 13 Unmodified _AELFQQEQQSADK_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MSMS 210214_Eclipse_Hela_QC 761.363647460938 2 761.362627 1520.7107 NaN NaN NaN NaN NaN NaN NaN 33.423 1 33.423 32.923 33.923 0 0 0 0 0.0006586 1 26299 84.17 68.279 1 727 3267 675 681 846 846 AELFTQSCADLDK 13 Unmodified _AELFTQSCADLDK_ 0 0 0 Q01082 Q01082 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 210214_Eclipse_Hela_QC 749.349304199219 2 749.348131 1496.68171 0.90383 0.00067729 -0.076979 -5.7684E-05 0.82685 0.0006196 749.348358868235 54.749 0.88756 54.749 54.285 55.173 0 49 17 4 0 0 0 2.5455E-06 1 56358 113.63 104.27 1 24662000 728 1809 676 682 847 847 AELGAGGDGHR 11 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AELGAGGDGHR_ 1 0 0 Q14244 Q14244 Q14244 MAP7 Ensconsin MULTI-MSMS 210214_Eclipse_Hela_QC 541.254516601562 2 541.254694 1080.49483 0.71725 0.00038821 0.18111 9.8026E-05 0.89836 0.00048624 541.255046084005 23.725 0.5476 23.725 23.501 24.048 0 21 10 3 0 0 0 2.1112E-05 1 12396 102.06 86.399 1 15940000 729 2074 677 683 848 848 AELGALPDDFIDSLEK 16 Unmodified _AELGALPDDFIDSLEK_ 0 0 0 Q9BYT8 Q9BYT8 Q9BYT8 NLN Neurolysin, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 866.935974121094 2 866.935625 1731.8567 1.1667 0.0010115 0.22751 0.00019724 1.3942 0.0012087 866.935661447695 106.3 0.34853 106.3 106.12 106.47 0 11 6 3 0 0 0 0.00015109 1 128399 76.073 70.101 1 18655000 730 3365 678 684 849 849 AELGEYIR 8 Unmodified _AELGEYIR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 210214_Eclipse_Hela_QC 475.750793457031 2 475.750724 949.486896 0.16474 7.8374E-05 0.057974 2.7581E-05 0.22271 0.00010596 475.750692519311 44.177 0.69517 44.177 43.892 44.587 0 33 13 3 0 0 0 0.0010141 1 41528 114.6 66.754 1 22660000 731 2070 679 685 850 850 AELGIPLEEVPPEEINYLTR 20 Unmodified _AELGIPLEEVPPEEINYLTR_ 0 0 0 Q13907 Q13907 Q13907 IDI1 Isopentenyl-diphosphate Delta-isomerase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1142.10107421875 2 1141.59937 2281.18418 0.58029 0.00066246 0.38622 0.00044091 0.96651 0.0011034 1141.59967082562 106.27 0.39841 106.27 106.12 106.52 0 28 7 5 0 0 0 7.1819E-14 1 128259 166.03 153.97 1 35445000 732 2041 680 686 851 851 AELIVQPELK 10 Unmodified _AELIVQPELK_ 0 0 0 P15924 P15924 P15924 DSP Desmoplakin MULTI-MSMS 210214_Eclipse_Hela_QC 570.337707519531 2 570.337164 1138.65977 0.58202 0.00033195 0.1966 0.00011213 0.77862 0.00044408 570.337247746802 59.386 0.49667 59.386 59.154 59.651 0 21 9 3 0 0 0 0.0055739 1 62983 56.432 39.892 1 6676500 733 906 681 687 852 852 AELLLLK 7 Unmodified _AELLLLK_ 0 0 0 Q8WUA4 Q8WUA4 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 MULTI-MSMS 210214_Eclipse_Hela_QC 400.267852783203 2 400.268022 798.521491 -0.23355 -9.3481E-05 0.072771 2.9128E-05 -0.16078 -6.4353E-05 400.267932764471 61.616 0.44824 61.616 61.492 61.94 0 14 8 2 0 0 0 0.030853 1 66256 54.525 0 1 2029900 734 2823 682 688 853 853 AELLMSLHDLDVGEICTVDPCHK 23 Unmodified _AELLMSLHDLDVGEICTVDPCHK_ 0 0 0 Q8WX92 Q8WX92 Q8WX92 NELFB Negative elongation factor B MULTI-MSMS 210214_Eclipse_Hela_QC 664.066772460938 4 663.817112 2651.23934 1.5624 0.0010371 -1.1615 -0.00077104 0.40086 0.0002661 664.067204520869 93.062 0.49715 93.062 92.792 93.29 0 29 9 5 0 0 0 0.016886 1 109985 27.32 24.708 1 3641100 735 2856 683 689 854 854 AELLSLTQMER 11 Unmodified _AELLSLTQMER_ 0 0 0 P14373 P14373 P14373 TRIM27 Zinc finger protein RFP MULTI-MSMS 210214_Eclipse_Hela_QC 645.840637207031 2 645.839745 1289.66494 0.69625 0.00044967 -0.93063 -0.00060104 -0.23437 -0.00015137 645.840104782228 72.327 0.79633 72.327 72.065 72.861 0 26 15 3 0 0 0 0.0025355 1 81222 61.65 32.177 1 2472100 736 878 684 690 855 855 AELMEISEDK 10 Unmodified _AELMEISEDK_ 0 0 0 P05455 P05455 P05455 SSB Lupus La protein MULTI-MSMS 210214_Eclipse_Hela_QC 582.776672363281 2 582.776279 1163.538 1.069 0.00062298 -0.067698 -3.9453E-05 1.0013 0.00058353 582.776299579839 45.188 0.69661 45.188 44.786 45.483 0 41 13 4 0 0 0 0.034994 1 42747 47.853 38.437 1 72571000 737 689 685 691 856 856 AELNEFLTR 9 Unmodified _AELNEFLTR_ 0 0 0 P23396 P23396 P23396 RPS3 40S ribosomal protein S3 MULTI-MSMS 210214_Eclipse_Hela_QC 546.788757324219 2 546.787838 1091.56112 0.70765 0.00038693 -0.081602 -4.4619E-05 0.62605 0.00034231 546.787829842969 59.526 1.1437 59.526 58.905 60.049 0 73 22 5 0 0 0 1.1232E-05 2 62921 134.05 91.943 1 258630000 738 1023 686 692 857;858 857 AELNPWPEYIYTR 13 Unmodified _AELNPWPEYIYTR_ 0 0 0 P26639 P26639 P26639 TARS Threonine--tRNA ligase, cytoplasmic MULTI-MSMS 210214_Eclipse_Hela_QC 826.412170410156 2 826.40938 1650.80421 1.5089 0.0012469 -0.39411 -0.00032569 1.1147 0.00092124 826.409419281769 87.714 1.978 87.714 86.787 88.765 0 130 39 6 0 0 0 8.3714E-06 3 102985 103.43 91.9 1 96452000 739 1063 687 693 859;860;861 860 AELPVTDK 8 Unmodified _AELPVTDK_ 0 0 0 P35658 P35658 P35658 NUP214 Nuclear pore complex protein Nup214 MULTI-MSMS 210214_Eclipse_Hela_QC 436.739624023438 2 436.739825 871.465098 -0.14665 -6.4047E-05 0.34509 0.00015071 0.19844 8.6666E-05 436.739698405905 26.175 0.69697 26.175 25.711 26.408 0 27 13 3 0 0 0 0.0071938 1 15756 73.208 37.714 1 10100000 740 1196 688 694 862 862 AELQLPPPPPPGHYGAWAAQELQAK 25 Unmodified _AELQLPPPPPPGHYGAWAAQELQAK_ 0 0 0 Q13435 Q13435 Q13435 SF3B2 Splicing factor 3B subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 889.799255371094 3 889.462367 2665.36527 1.5517 0.0013802 -0.2431 -0.00021623 1.3086 0.001164 889.796661367896 87.083 0.94389 87.083 86.787 87.731 0 104 18 7 0 0 0 0.0095116 1 101475 31.441 28.679 1 44152000 741 1987 689 695 863 863 AELQMLLEEEIPSGK 15 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AELQMLLEEEIPSGK_ 1 0 0 Q8IZP0 Q8IZP0 Q8IZP0 ABI1 Abl interactor 1 MULTI-SECPEP 210214_Eclipse_Hela_QC 864.869506835938 2 864.939853 1727.86515 1.3583 0.0011748 0.13848 0.00011978 1.4967 0.0012946 864.939328988531 111.12 0.29887 111.12 111 111.3 0 12 5 3 0 0 0 0.037993 1 134971 46.481 23.795 1 8853300 742 2661 690 696 864 864 AELRDDPIISTHLAK 15 Unmodified _AELRDDPIISTHLAK_ 0 0 1 O00231 O00231 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 MULTI-MSMS 210214_Eclipse_Hela_QC 560.643615722656 3 560.308938 1677.90498 0.47015 0.00026343 0.087265 4.8895E-05 0.55742 0.00031233 560.643271046956 42.809 0.89649 42.809 42.448 43.344 0 55 17 5 0 0 0 0.015846 1 39543 37.262 30.964 1 42808000 743 139 691 697 865 865 AELSEEALLSVLPTIR 16 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AELSEEALLSVLPTIR_ 1 0 0 P45974 P45974 P45974 USP5 Ubiquitin carboxyl-terminal hydrolase 5 MULTI-MSMS 210214_Eclipse_Hela_QC 891.998596191406 2 891.996017 1781.97748 2.1242 0.0018948 -0.068875 -6.1436E-05 2.0553 0.0018334 892.497506811359 113 0.3812 113 112.88 113.26 0 31 7 6 0 0 0 4.6034E-82 1 137555 256.52 250.29 1 40449000 744 1298 692 698 866 866 AELTSQESQISTYEEELAK 19 Unmodified _AELTSQESQISTYEEELAK_ 0 0 0 P42566 P42566 P42566 EPS15 Epidermal growth factor receptor substrate 15 MULTI-MSMS 210214_Eclipse_Hela_QC 1079.02014160156 2 1078.5157 2155.01684 0.63879 0.00068894 -1.1656 -0.0012571 -0.52678 -0.00056814 1078.51304358235 78.133 0.59776 78.133 77.871 78.468 0 23 11 3 0 0 0 0.053522 1 89193 26.532 16.999 1 4621700 745 1273 693 699 867 867 AELTSSAPACYALAISPDAK 20 Unmodified _AELTSSAPACYALAISPDAK_ 0 0 0 Q04726 Q04726 Q04726 TLE3 Transducin-like enhancer protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 1019.00482177734 2 1018.50388 2034.99321 0.99307 0.0010114 -1.2565 -0.0012798 -0.26344 -0.00026831 1019.0042181333 80.01 0.59745 80.01 79.662 80.259 0 29 11 3 0 0 0 0.00022967 1 91817 78.486 73.102 1 8194300 746 1849 694 700 868 868 AELTVEVR 8 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AELTVEVR_ 1 0 0 P51114 P51114 P51114 FXR1 Fragile X mental retardation syndrome-related protein 1 MULTI-SECPEP 210214_Eclipse_Hela_QC 958.961547851562 1 958.520387 957.513111 1.6131 0.0015462 0.13412 0.00012856 1.7472 0.0016748 958.520549555552 71.011 0.44795 71.011 70.72 71.168 0 16 8 2 0 0 0 0.016506 1 79466 74.415 24.376 1 5044600 747 1432 695 701 869 869 AELVQGQSAPVGMK 14 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AELVQGQSAPVGMK_ 1 0 0 Q96I24 Q96I24 Q96I24 FUBP3 Far upstream element-binding protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 728.879150390625 2 728.876859 1455.73916 1.2299 0.00089647 -0.10799 -7.8709E-05 1.1219 0.00081776 728.876901424609 75.988 0.57772 75.988 75.701 76.279 0 32 11 5 0 0 0 5.4416E-10 1 86252 129.16 102.64 1 12876000 748 3060 696 702 870 870 AELVQHYLNIAAEK 14 Unmodified _AELVQHYLNIAAEK_ 0 0 0 REV__Q8NDW8 REV__Q8NDW8 MULTI-MSMS 210214_Eclipse_Hela_QC 799.932067871094 2 799.93048 1597.84641 1.5445 0.0012355 0.030033 2.4025E-05 1.5745 0.0012595 799.930521610721 68.13 0.69587 68.13 67.71 68.406 0 43 13 4 0 0 0 0.0052069 2 75265 48.44 16.738 1 20742000 + 749 4193 697 703 871;872 872 AEMDAAIASCK 11 Unmodified _AEMDAAIASCK_ 0 0 0 Q02252 Q02252 Q02252 ALDH6A1 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 583.762390136719 2 583.762649 1165.51074 0.75533 0.00044093 -4.324 -0.0025242 -3.5687 -0.0020833 583.759379368963 30.816 0.49867 30.816 30.573 31.072 0 13 9 2 0 0 0 0.016982 1 22557 45.158 35.171 1 1830400 750 1827 698 704 873 873 AEMDQILHGLDK 12 Oxidation (M) _AEM(Oxidation (M))DQILHGLDK_ AEM(1)DQILHGLDK AEM(41)DQILHGLDK 0 1 0 P04424 P04424 P04424 ASL Argininosuccinate lyase MULTI-MSMS 210214_Eclipse_Hela_QC 693.341796875 2 693.340109 1384.66566 0.73914 0.00051247 0.21014 0.0001457 0.94928 0.00065817 693.340582656001 84.448 1.4934 84.448 83.653 85.147 0 79 29 4 0 0 0 0.045427 1 97689 41.448 7.1954 1 48575000 751 665 699 705 874 874 97 AEMTCSGILPIDQMR 15 Unmodified _AEMTCSGILPIDQMR_ 0 0 0 Q9H089 Q9H089 Q9H089 LSG1 Large subunit GTPase 1 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 861.405212402344 2 861.4046 1720.79465 1.1728 0.0010102 -0.57753 -0.00049749 0.59525 0.00051275 861.404727498615 78.353 0.54717 78.353 78.07 78.617 0 34 10 4 0 0 0 0.0043487 1 89474 48.004 42.032 1 5497900 752 3404 700 706 875 875 AENAGLSSTAGLLR 14 Unmodified _AENAGLSSTAGLLR_ 0 0 0 P17275 P17275 P17275 JUNB Transcription factor jun-B MULTI-MSMS 210214_Eclipse_Hela_QC 680.366516113281 2 680.364973 1358.71539 1.7513 0.0011915 -0.2446 -0.00016642 1.5067 0.0010251 680.364833633854 55.539 0.54697 55.539 55.272 55.819 0 22 10 3 0 0 0 1.625E-05 1 57673 99.215 76.475 1 10322000 753 931 701 707 876 876 AENFFILR 8 Unmodified _AENFFILR_ 0 0 0 P59998 P59998 P59998 ARPC4 Actin-related protein 2/3 complex subunit 4 MULTI-MSMS 210214_Eclipse_Hela_QC 505.277404785156 2 505.276909 1008.53927 1.0795 0.00054545 0.11075 5.596E-05 1.1903 0.00060141 505.277105927951 74.334 1.0462 74.334 74.007 75.053 0 51 20 4 0 0 0 0.00031852 1 83819 132.29 89.285 1 20119000 754 1572 702 708 877 877 AENIPAVVIEIK 12 Unmodified _AENIPAVVIEIK_ 0 0 0 Q9Y6M5 Q9Y6M5 Q9Y6M5 SLC30A1 Zinc transporter 1 MULTI-MSMS 210214_Eclipse_Hela_QC 648.383117675781 2 648.382103 1294.74965 0.56072 0.00036356 0.063689 4.1295E-05 0.62441 0.00040486 648.382030986041 79.786 0.69706 79.786 79.463 80.16 0 31 13 3 0 0 0 0.0012851 1 91465 63.408 54.876 1 14059000 755 4161 703 709 878 878 AENLGEVLR 9 Unmodified _AENLGEVLR_ 0 0 0 Q92544 Q92544 Q92544 TM9SF4 Transmembrane 9 superfamily member 4 MULTI-MSMS 210214_Eclipse_Hela_QC 500.775024414062 2 500.774731 999.534909 0.78365 0.00039243 0.7781 0.00038965 1.5617 0.00078208 500.775011360616 45.128 0.54748 45.128 44.786 45.334 0 23 10 3 0 0 0 0.0038691 1 42868 68.224 45.152 1 8413700 756 2882 704 710 879 879 AENLLLDADMNIK 13 Unmodified _AENLLLDADMNIK_ 0 0 0 P27448;Q7KZI7 P27448;Q7KZI7 P27448 MARK3;MARK2 MAP/microtubule affinity-regulating kinase 3;Serine/threonine-protein kinase MARK2 MSMS 210214_Eclipse_Hela_QC 730.380065917969 2 730.376691 1458.73883 NaN NaN NaN NaN NaN NaN NaN 81.767 1 81.767 81.267 82.267 0 0 0 0 0.024546 1 94333 47.894 10.418 1 757 1072;2508 705 711 880 880 AENLQLLTENELHR 14 Unmodified _AENLQLLTENELHR_ 0 0 0 O94992 O94992 O94992 HEXIM1 Protein HEXIM1 MULTI-MSMS 210214_Eclipse_Hela_QC 560.963256835938 3 560.628559 1678.86385 0.48144 0.00026991 -1.1778 -0.00066033 -0.6964 -0.00039042 560.96279624731 59.83 0.84533 59.83 59.304 60.149 0 45 16 5 0 0 0 0.00036064 1 63614 60.657 49.218 1 24995000 758 530 706 712 881 881 AENNSEVGASGYGVPGPTWDR 21 Unmodified _AENNSEVGASGYGVPGPTWDR_ 0 0 0 Q08211 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 210214_Eclipse_Hela_QC 1081.99304199219 2 1081.99051 2161.96647 0.82671 0.00089449 -0.24847 -0.00026884 0.57824 0.00062565 1082.49173501056 65.825 0.99499 65.825 65.354 66.349 0 63 17 5 0 0 0 2.5424E-05 2 71851 94.487 88.764 1 57169000 759 1882 707 713 882;883 883 AENQVLAMR 9 Unmodified _AENQVLAMR_ 0 0 0 P51572 P51572 P51572 BCAP31 B-cell receptor-associated protein 31 MULTI-MSMS 210214_Eclipse_Hela_QC 516.269287109375 2 516.268758 1030.52296 0.27835 0.0001437 -0.23174 -0.00011964 0.046611 2.4064E-05 516.268615728633 32.401 0.59383 32.401 32.066 32.66 0 21 11 2 0 0 0 4.912E-07 1 24680 150.05 123.45 1 54480000 760 1445 708 714 884 884 AENSSLNLIGK 11 Unmodified _AENSSLNLIGK_ 0 0 0 P46459 P46459 P46459 NSF Vesicle-fusing ATPase MULTI-MSMS 210214_Eclipse_Hela_QC 573.311706542969 2 573.311677 1144.6088 0.64337 0.00036885 -0.31808 -0.00018236 0.32529 0.00018649 573.311500509358 43.479 0.64687 43.479 43.095 43.742 0 27 12 3 0 0 0 0.0038789 1 40407 55.064 24.897 1 9870200 761 1309 709 715 885 885 AENYDIPSADR 11 Unmodified _AENYDIPSADR_ 0 0 0 P22314 P22314 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 MULTI-MSMS 210214_Eclipse_Hela_QC 625.755065917969 2 625.786024 1249.55749 0.01837 1.1496E-05 -0.084547 -5.2908E-05 -0.066176 -4.1412E-05 625.785997528812 36.099 0.9788 36.099 35.74 36.718 0 62 19 5 0 0 0 1.623E-13 3 30089 188.99 180.24 1 220110000 762 1009 710 716 886;887;888 887 AEPAAPPAAPSTPAPPPAVPK 21 Unmodified _AEPAAPPAAPSTPAPPPAVPK_ 0 0 0 P48634 P48634 P48634 PRRC2A Protein PRRC2A MULTI-MSMS 210214_Eclipse_Hela_QC 967.523071289062 2 967.522733 1933.03091 1.3109 0.0012684 -0.0036746 -3.5553E-06 1.3073 0.0012648 968.024116551662 55.844 0.59726 55.844 55.521 56.118 0 26 11 3 0 0 0 0.0019082 1 58001 41.644 36.15 1 6768700 763 1346 711 717 889 889 AEPDHMVLGK 10 Unmodified _AEPDHMVLGK_ 0 0 0 P41252 P41252 P41252 IARS Isoleucine--tRNA ligase, cytoplasmic MULTI-MSMS 210214_Eclipse_Hela_QC 548.776184082031 2 548.776416 1095.53828 -0.21881 -0.00012008 1.4272 0.00078322 1.2084 0.00066314 548.776317309393 24.949 0.34781 24.949 24.717 25.064 0 18 6 5 0 0 0 0.0061433 1 14210 54.436 32.305 1 13957000 764 1261 712 718 890 890 AEPDYIEDDNPELIRPQK 18 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AEPDYIEDDNPELIRPQK_ 1 0 1 Q9H098 Q9H098 Q9H098 FAM107B Protein FAM107B MULTI-MSMS 210214_Eclipse_Hela_QC 1093.029296875 2 1092.5264 2183.03824 0.52081 0.00056899 0.13097 0.00014308 0.65177 0.00071208 1092.52621898924 76.804 0.49808 76.804 76.527 77.025 0 28 9 4 0 0 0 1.1616E-05 1 87318 86.028 83.319 1 7355400 765 3405 713 719 891 891 AEPEAGEEQAGDDRDSGGPVLQFDYEAVANR 31 Unmodified _AEPEAGEEQAGDDRDSGGPVLQFDYEAVANR_ 0 0 1 P56182 P56182 P56182 RRP1 Ribosomal RNA processing protein 1 homolog A MULTI-MSMS 210214_Eclipse_Hela_QC 1098.49462890625 3 1098.15902 3291.45522 1.2842 0.0014103 0.3375 0.00037063 1.6217 0.0017809 1098.49376487373 77.467 0.89568 77.467 76.925 77.821 0 79 17 7 0 0 0 3.996E-07 1 88258 67.78 67.237 1 13483000 766 1550 714 720 892 892 AEPEDHYFLLTEPPLNTPENR 21 Unmodified _AEPEDHYFLLTEPPLNTPENR_ 0 0 0 P61158 P61158 P61158 ACTR3 Actin-related protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 828.067993164062 3 828.067683 2481.18122 1.9183 0.0015885 0.14187 0.00011748 2.0602 0.001706 828.402184111419 83.369 1.4974 83.369 82.604 84.102 0 130 30 7 0 0 0 5.6906E-06 2 96183 74.364 70.487 1 48018000 767 1604 715 721 893;894 893 AEPFLSEYQHQPQTSNCTGAAAVQEELNPERPPGAEER 38 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AEPFLSEYQHQPQTSNCTGAAAVQEELNPERPPGAEER_ 1 0 1 O94992 O94992 O94992 HEXIM1 Protein HEXIM1 MULTI-MSMS 210214_Eclipse_Hela_QC 1427.99792480469 3 1427.32436 4278.95124 2.7185 0.0038802 -0.09489 -0.00013544 2.6237 0.0037448 1427.99306707645 85.76 0.59634 85.76 85.395 85.991 0 54 11 7 0 0 0 1.3404E-09 1 99893 60.48 58.99 1 9340800 768 530 716 722 895 895 AEPGQQQPAAEPPPAEGLLR 20 Unmodified _AEPGQQQPAAEPPPAEGLLR_ 0 0 0 P55884 P55884 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B MULTI-MSMS 210214_Eclipse_Hela_QC 1029.02734375 2 1028.52654 2055.03852 1.234 0.0012692 -0.56491 -0.00058102 0.66907 0.00068816 1029.02712515235 60.203 1.095 60.203 59.85 60.945 0 47 21 4 0 0 0 0.001761 1 64180 44.457 34.923 1 8171900 769 1547 717 723 896 896 AEPMQWASLELPAAK 15 Unmodified _AEPMQWASLELPAAK_ 0 0 0 Q9UHD1 Q9UHD1 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 821.419250488281 2 821.418891 1640.82323 1.3094 0.0010756 0.051569 4.2359E-05 1.361 0.0011179 821.41899700484 89.288 0.9946 89.288 88.815 89.809 0 52 19 4 0 0 0 0.00023741 1 104642 85.845 80.361 1 27407000 770 3861 718 724 897 897 AEPPQAMNALMR 12 Unmodified _AEPPQAMNALMR_ 0 0 0 Q12906 Q12906 Q12906 ILF3 Interleukin enhancer-binding factor 3 MULTI-MSMS 210214_Eclipse_Hela_QC 664.826477050781 2 664.826114 1327.63768 0.80466 0.00053496 -0.67776 -0.00045059 0.1269 8.4367E-05 664.825922008298 54.816 0.89547 54.816 54.426 55.322 0 53 17 5 0 0 0 9.8937E-05 1 56546 94.85 80.732 1 37758000 771 1922 719 725 898 898 AEPPQCTSLAWSADGQTLFAGYTDNLVR 28 Unmodified _AEPPQCTSLAWSADGQTLFAGYTDNLVR_ 0 0 0 P63244 P63244 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 1024.15344238281 3 1023.48546 3067.43455 1.0586 0.0010834 -0.53959 -0.00055226 0.51899 0.00053118 1024.15348988553 106.24 0.44826 106.24 106.07 106.52 0 33 8 6 0 0 0 4.7103E-05 2 128221 52.92 50.343 1 107670000 772 1717 720 726 899;900 899 AEPQPPSGGLTDEAALSCCSDADPSTK 27 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AEPQPPSGGLTDEAALSCCSDADPSTK_ 1 0 0 Q04760 Q04760 Q04760 GLO1 Lactoylglutathione lyase MULTI-MSMS 210214_Eclipse_Hela_QC 1402.61108398438 2 1402.10529 2802.19602 2.8259 0.0039622 -0.35901 -0.00050337 2.4669 0.0034589 1402.60663777386 81.928 0.84451 81.928 81.452 82.296 0 74 16 6 0 0 0 1.2954E-05 1 94284 88.551 83.829 1 23056000 773 1850 721 727 901 901 AEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTK 39 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AEPSAATQSHSISSSSFGAEPSAPGGGGSPGACPALGTK_ 1 0 0 O95197 O95197 O95197 RTN3 Reticulon-3 MULTI-MSMS 210214_Eclipse_Hela_QC 1205.22436523438 3 1204.88842 3611.64343 1.1379 0.0013711 0.46803 0.00056392 1.606 0.001935 1205.5571258546 70.591 0.54689 70.591 70.323 70.87 0 46 10 7 0 0 0 2.0761E-24 1 78715 107.73 103.02 1 12377000 774 543 722 728 902 902 AEPSEVDMNSPK 12 Unmodified _AEPSEVDMNSPK_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 652.295104980469 2 652.295367 1302.57618 0.56049 0.00036561 0.1354 8.8321E-05 0.69589 0.00045393 652.295404498792 26.739 0.74657 26.739 26.458 27.204 0 32 14 3 0 0 0 0.001008 1 16622 65.5 41.411 1 14737000 775 3612 723 729 903 903 AEPSFYPR 8 Unmodified _AEPSFYPR_ 0 0 0 Q9H8H0 Q9H8H0 Q9H8H0 NOL11 Nucleolar protein 11 MULTI-MSMS 210214_Eclipse_Hela_QC 483.737457275391 2 483.737617 965.460681 0.11835 5.7251E-05 -0.35517 -0.00017181 -0.23682 -0.00011456 483.737329637113 37.697 0.68438 37.697 37.26 37.944 0 27 13 3 0 0 0 0.025985 1 32376 50.898 23.777 1 6055000 776 3507 724 730 904 904 AEPTHWCLLVR 11 Unmodified _AEPTHWCLLVR_ 0 0 0 Q10570 Q10570 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 461.574340820312 3 461.23969 1380.69724 0.68755 0.00031713 0.025768 1.1885E-05 0.71332 0.00032901 461.239640335789 55.83 0.39797 55.83 55.67 56.068 0 12 7 2 0 0 0 0.053748 1 58160 23.749 12.844 1 2404100 777 1904 725 731 905 905 AEPVEVVAPR 10 Unmodified _AEPVEVVAPR_ 0 0 0 P09874 P09874 P09874 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 533.798645019531 2 533.798206 1065.58186 0.18517 9.8841E-05 1.9368 0.0010339 2.122 0.0011327 533.798915176136 37.697 1.4294 37.697 37.062 38.491 0 81 28 5 0 0 0 0.00073861 1 32302 82.75 57.828 1 60483000 778 784 726 732 906 906 AEQDVENDLLDYDEEEEPQAPQESTPAPPK 30 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AEQDVENDLLDYDEEEEPQAPQESTPAPPK_ 1 0 0 O00148 O00148 O00148 DDX39A ATP-dependent RNA helicase DDX39A MSMS 210214_Eclipse_Hela_QC 1142.50720214844 3 1142.50575 3424.49541 NaN NaN NaN NaN NaN NaN NaN 105.09 1 105.09 104.59 105.59 0 0 0 0 0.0064344 1 126627 42.536 40.606 1 779 127 727 733 907 907 AEQEEEFISNTLFK 14 Unmodified _AEQEEEFISNTLFK_ 0 0 0 Q16204 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 MULTI-MSMS 210214_Eclipse_Hela_QC 843.408325195312 2 842.906867 1683.79918 1.0897 0.00091853 1.8008 0.0015179 2.8906 0.0024365 843.411755137664 85.42 1.1926 85.42 84.599 85.792 0 65 23 4 0 0 0 1.4799E-05 1 99480 99.5 73.382 1 16701000 780 2225 728 734 908 908 AEQENQELPDEGTLEETLTNETR 23 Unmodified _AEQENQELPDEGTLEETLTNETR_ 0 0 0 P50851 P50851 P50851 LRBA Lipopolysaccharide-responsive and beige-like anchor protein MULTI-MSMS 210214_Eclipse_Hela_QC 1324.10754394531 2 1323.60429 2645.19403 1.9399 0.0025677 0.78555 0.0010398 2.7255 0.0036074 1324.10606723517 86.396 0.54681 86.396 85.991 86.538 0 26 10 4 0 0 0 0.0010306 2 100700 45.33 42.837 1 3015000 781 1425 729 735 909;910 909 AEQFYCGDTEGK 12 Unmodified _AEQFYCGDTEGK_ 0 0 0 Q02218 Q02218 Q02218 OGDH 2-oxoglutarate dehydrogenase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 702.790588378906 2 702.790449 1403.56634 0.55248 0.00038827 -0.35146 -0.000247 0.20102 0.00014127 702.790117011384 29.107 0.63572 29.107 28.744 29.38 0 26 12 4 0 0 0 0.00020663 1 20095 85.355 81.309 1 7900200 782 1825 730 736 911 911 AEQFYCGDTEGKK 13 Unmodified _AEQFYCGDTEGKK_ 0 0 1 Q02218 Q02218 Q02218 OGDH 2-oxoglutarate dehydrogenase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 511.560638427734 3 511.561046 1531.66131 -0.059111 -3.0239E-05 -0.12926 -6.6127E-05 -0.18838 -9.6365E-05 511.561027789132 21.534 0.29906 21.534 21.36 21.659 0 8 5 2 0 0 0 0.024787 1 9347 21.86 13.946 1 4098800 783 1825 731 737 912 912 AEQINQAAGEASAVLAK 17 Unmodified _AEQINQAAGEASAVLAK_ 0 0 0 Q9UJZ1 Q9UJZ1 Q9UJZ1 STOML2 Stomatin-like protein 2, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 836.440368652344 2 835.939033 1669.86351 1.3654 0.0011414 0.066005 5.5176E-05 1.4314 0.0011966 835.9390083082 59.675 0.59677 59.675 59.403 59.999 0 36 11 5 0 0 0 4.7468E-08 1 63344 113.65 97.759 1 29282000 784 3900 732 738 913 913 AEQLGAEGNVDESQK 15 Unmodified _AEQLGAEGNVDESQK_ 0 0 0 Q9NQ29 Q9NQ29 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 MULTI-MSMS 210214_Eclipse_Hela_QC 787.869445800781 2 787.868273 1573.72199 0.13981 0.00011015 -0.0062516 -4.9254E-06 0.13356 0.00010522 787.868469487289 24.89 0.44738 24.89 24.717 25.164 0 13 8 2 0 0 0 0.00012508 1 14165 97.911 91.378 1 9115300 785 3591 733 739 914 914 AEQLMSDENCFK 12 Unmodified _AEQLMSDENCFK_ 0 0 0 Q96ST3 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a MULTI-MSMS 210214_Eclipse_Hela_QC 736.814453125 2 736.313234 1470.61191 1.1232 0.00082705 0.53252 0.0003921 1.6557 0.0012191 736.314101646481 45.083 0.39814 45.083 44.836 45.234 0 13 7 2 0 0 0 0.00040115 1 42832 73.067 62.835 1 3814700 786 3141 734 740 915 915 AEQLSPGK 8 Unmodified _AEQLSPGK_ 0 0 0 O15541 O15541 O15541 RNF113A RING finger protein 113A MULTI-MSMS 210214_Eclipse_Hela_QC 415.224517822266 2 415.224342 828.434132 -0.023697 -9.8397E-06 0.12349 5.1277E-05 0.099796 4.1438E-05 415.224362793333 22.035 0.34771 22.035 21.858 22.206 0 12 6 3 0 0 0 0.042266 1 10171 44.692 17.73 1 9535000 787 281 735 741 916 916 AEQMFGEMEVWNAISER 17 Unmodified _AEQMFGEMEVWNAISER_ 0 0 0 O75400 O75400 O75400 PRPF40A Pre-mRNA-processing factor 40 homolog A MULTI-MSMS 210214_Eclipse_Hela_QC 1014.45892333984 2 1013.9535 2025.89245 1.7511 0.0017755 -0.51754 -0.00052476 1.2336 0.0012508 1014.45454339031 105.01 0.34956 105.01 104.83 105.18 0 16 6 4 0 0 0 1.1765E-07 1 126543 107.14 85.267 1 6269900 788 453 736 742 917 917 AEQPDGLILGMGGQTALNCGVELFK 25 Oxidation (M) _AEQPDGLILGM(Oxidation (M))GGQTALNCGVELFK_ AEQPDGLILGM(1)GGQTALNCGVELFK AEQPDGLILGM(49)GGQTALNCGVELFK 0 1 0 P31327 P31327 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1318.15185546875 2 1317.64874 2633.28292 1.7708 0.0023333 -0.72005 -0.00094878 1.0508 0.0013845 1318.14977223487 105.5 0.34885 105.5 105.38 105.72 0 17 6 5 0 0 0 0.0013423 1 127289 49.049 44.657 1 17990000 789 1141 737 743 918 918 290 AEQVDPNFYSK 11 Unmodified _AEQVDPNFYSK_ 0 0 0 Q96DB5 Q96DB5 Q96DB5 RMDN1 Regulator of microtubule dynamics protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 649.306030273438 2 649.306592 1296.59863 0.31586 0.00020509 0.16885 0.00010964 0.48471 0.00031472 649.306621654854 41.037 0.69633 41.037 40.562 41.258 0 36 13 4 0 0 0 0.00031824 1 37026 85.377 74.854 1 11242000 790 2998 738 744 919 919 AEQWNVNYVETSAK 14 Unmodified _AEQWNVNYVETSAK_ 0 0 0 P11233 P11233 P11233 RALA Ras-related protein Ral-A MULTI-MSMS 210214_Eclipse_Hela_QC 819.893981933594 2 819.891552 1637.76855 1.6213 0.0013293 0.28466 0.00023339 1.9059 0.0015626 819.891791148587 56.767 0.59681 56.767 56.467 57.064 0 34 11 4 0 0 0 6.5581E-05 2 59483 108.56 98.332 1 14426000 791 826 739 745 920;921 921 AERPEDLNLPNAVITR 16 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AERPEDLNLPNAVITR_ 1 0 1 Q9NRF9 Q9NRF9 Q9NRF9 POLE3 DNA polymerase epsilon subunit 3 MULTI-MSMS 210214_Eclipse_Hela_QC 925.994873046875 2 925.491964 1848.96938 1.0625 0.00098331 0.33751 0.00031236 1.4 0.0012957 925.993590808966 79.79 0.89622 79.79 79.214 80.111 0 52 17 5 0 0 0 2.6403E-08 1 91396 115.82 80.079 1 41135000 792 3620 740 746 922 922 AESAPLPVSADDTPEVLNR 19 Unmodified _AESAPLPVSADDTPEVLNR_ 0 0 0 O95674 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 991.503723144531 2 990.997276 1979.98 1.5338 0.00152 0.80903 0.00080175 2.3429 0.0023218 990.998050641874 74.232 0.39807 74.232 74.057 74.455 0 21 7 4 0 0 0 0.0010712 1 83999 49.929 36.023 1 4183700 793 587 741 747 923 923 AESCGSGNSTGYQIR 15 Unmodified _AESCGSGNSTGYQIR_ 0 0 0 Q9H2U1 Q9H2U1 Q9H2U1 DHX36 ATP-dependent RNA helicase DHX36 MULTI-MSMS 210214_Eclipse_Hela_QC 793.847290039062 2 793.846818 1585.67908 0.74361 0.00059031 -0.39312 -0.00031208 0.35049 0.00027824 793.846730705362 24.593 0.34661 24.593 24.469 24.815 0 15 6 3 0 0 0 2.9001E-11 1 13754 131.43 120.28 1 8594300 794 3446 742 748 924 924 AESDGSLLLESK 12 Unmodified _AESDGSLLLESK_ 0 0 0 Q6IN85;Q5MIZ7 Q6IN85 Q6IN85 SMEK1;SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3A;Serine/threonine-protein phosphatase 4 regulatory subunit 3B MULTI-MSMS 210214_Eclipse_Hela_QC 624.818969726562 2 624.819532 1247.62451 0.50544 0.00031581 0.58706 0.00036681 1.0925 0.00068261 624.819901908435 46.404 0.89542 46.404 46.13 47.026 0 30 17 2 0 0 0 0.0005432 1 45348 69.01 54.337 1 14224000 795 2421 743 749 925 925 AESEQEAYLRED 12 Unmodified _AESEQEAYLRED_ 0 0 1 Q9NR28 Q9NR28 Q9NR28 DIABLO Diablo homolog, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 720.319458007812 2 720.317885 1438.62122 0.52673 0.00037942 0.4975 0.00035836 1.0242 0.00073778 720.318049668906 34.476 0.53091 34.476 34.314 34.845 0 25 11 3 0 0 0 0.00058749 2 27776 100.48 83.041 1 12170000 796 3611 744 750 926;927 927 AESFFQTK 8 Unmodified _AESFFQTK_ 0 0 0 P13798 P13798 P13798 APEH Acylamino-acid-releasing enzyme MULTI-MSMS 210214_Eclipse_Hela_QC 479.238311767578 2 479.23745 956.460347 0.092931 4.4536E-05 1.4545 0.00069704 1.5474 0.00074158 479.237478401316 35.536 0.7816 35.536 35.144 35.925 0 43 15 4 0 0 0 0.00052983 1 29361 121.62 94.094 1 19219000 797 866 745 751 928 928 AESFMFR 7 Unmodified _AESFMFR_ 0 0 0 Q13126 Q13126 Q13126 MTAP S-methyl-5-thioadenosine phosphorylase MULTI-MSMS 210214_Eclipse_Hela_QC 444.2080078125 2 444.207638 886.400723 0.35787 0.00015897 -0.086637 -3.8485E-05 0.27123 0.00012048 444.20759033667 47.779 0.74656 47.779 47.473 48.22 0 26 14 2 0 0 0 0.0032596 1 46552 111.28 100.97 1 10329000 798 1946 746 752 929 929 AESIIIR 7 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AESIIIR_ 1 0 0 Q8TAT6 Q8TAT6 Q8TAT6 NPLOC4 Nuclear protein localization protein 4 homolog MULTI-SECPEP 210214_Eclipse_Hela_QC 844.118408203125 1 843.493444 842.486168 1.1868 0.001001 0.54833 0.00046251 1.7351 0.0014636 843.493853681785 73.385 0.5482 73.385 73.11 73.658 0 22 10 3 0 0 0 0.045444 1 82868 54.525 28.416 1 4155100 799 2787 747 753 930 930 AESLIGVYPEQGDCVISK 18 Unmodified _AESLIGVYPEQGDCVISK_ 0 0 0 Q14683 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 983.486999511719 2 982.985323 1963.95609 1.1041 0.0010854 -0.04542 -4.4647E-05 1.0587 0.0010407 983.487102097079 75.957 0.67686 75.957 75.701 76.378 0 47 13 5 0 0 0 6.2909E-05 2 86137 102.62 84.353 1 27487000 800 2100 748 754 931;932 932 AESLVFVQTDK 11 Unmodified _AESLVFVQTDK_ 0 0 0 CON__ENSEMBL:ENSBTAP00000037665 CON__ENSEMBL:ENSBTAP00000037665 CON__ENSEMBL:ENSBTAP00000037665 MULTI-MSMS 210214_Eclipse_Hela_QC 618.827514648438 2 618.82716 1235.63977 0.48992 0.00030317 -0.11082 -6.858E-05 0.37909 0.00023459 618.827083516563 54.645 0.59057 54.645 54.333 54.923 0 28 11 3 0 0 0 8.1271E-05 1 56273 99.653 77.505 1 11255000 + 801 42 749 755 933 933 AESPEEVACR 10 Unmodified _AESPEEVACR_ 0 0 0 Q7Z6Z7 Q7Z6Z7 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 MULTI-MSMS 210214_Eclipse_Hela_QC 574.255554199219 2 574.256045 1146.49754 0.44173 0.00025367 0.45464 0.00026108 0.89637 0.00051475 574.255684253254 22.397 0.44719 22.397 22.156 22.603 0 19 8 3 0 0 0 0.00039498 1 10597 90.657 58.722 1 9114500 802 2557 750 756 934 934 AESQLLECK 9 Unmodified _AESQLLECK_ 0 0 0 P12270 P12270 P12270 TPR Nucleoprotein TPR MULTI-MSMS 210214_Eclipse_Hela_QC 539.266174316406 2 539.265881 1076.51721 0.10106 5.4499E-05 0.60029 0.00032372 0.70135 0.00037822 539.26614161018 27.044 0.49726 27.044 26.906 27.403 0 18 9 3 0 0 0 0.035143 1 17196 41.876 29.349 1 13008000 803 849 751 757 935 935 AESQNTFEETELELK 15 Unmodified _AESQNTFEETELELK_ 0 0 0 Q5JSH3 Q5JSH3 Q5JSH3 WDR44 WD repeat-containing protein 44 MULTI-MSMS 210214_Eclipse_Hela_QC 884.921508789062 2 884.417796 1766.82104 1.1071 0.00097911 0.41985 0.00037132 1.5269 0.0013504 884.417723953026 64.969 0.49818 64.969 64.755 65.254 0 21 9 3 0 0 0 0.036542 1 70945 33.088 22.856 1 3633400 804 2327 752 758 936 936 AESSESFTMASSPAQR 16 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AESSESFTMASSPAQR_ 1 0 0 P49736 P49736 P49736 MCM2 DNA replication licensing factor MCM2 MULTI-MSMS 210214_Eclipse_Hela_QC 864.381042480469 2 864.380691 1726.74683 0.54849 0.0004741 -0.35749 -0.00030901 0.191 0.00016509 864.881717658911 64.363 0.63475 64.363 64.121 64.755 0 22 13 2 0 0 0 2.0113E-05 1 70002 89.403 80.215 1 12514000 805 1387 753 759 937 937 AESVAAPITVR 11 Unmodified _AESVAAPITVR_ 0 0 0 Q96K76 Q96K76 Q96K76 USP47 Ubiquitin carboxyl-terminal hydrolase 47 MULTI-MSMS 210214_Eclipse_Hela_QC 557.317077636719 2 557.316763 1112.61897 0.40275 0.00022446 -0.26362 -0.00014692 0.13913 7.7541E-05 557.316741412631 41.972 0.64307 41.972 41.506 42.149 0 25 12 3 0 0 0 0.0026351 1 38424 61.161 48.634 1 5438100 806 3084 754 760 938 938 AESVVLEHR 9 Unmodified _AESVVLEHR_ 0 0 0 Q9BWS9 Q9BWS9 Q9BWS9 CHID1 Chitinase domain-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 520.279846191406 2 520.28018 1038.54581 -0.030794 -1.6021E-05 -1.1566 -0.00060178 -1.1874 -0.0006178 520.279576120878 21.19 0.39878 21.19 21.011 21.41 0 18 7 3 0 0 0 0.0063869 1 8843 61.679 37.724 1 5918500 807 3334 755 761 939 939 AETAAGVGR 9 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AETAAGVGR_ 1 0 0 Q12788 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-SECPEP 210214_Eclipse_Hela_QC 872.822631835938 1 873.442471 872.435195 0.84046 0.00073409 -0.55092 -0.0004812 0.28954 0.00025289 873.441871795417 29.417 0.79506 29.417 29.181 29.976 0 21 15 2 0 0 0 0.034325 1 20531 48.561 17.893 1 5106300 808 1908 756 762 940 940 AETDHLFDLSR 11 Unmodified _AETDHLFDLSR_ 0 0 0 Q9NPF5 Q9NPF5 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 435.21435546875 3 435.214086 1302.62043 0.32036 0.00013942 -0.071257 -3.1012E-05 0.2491 0.00010841 435.213946973407 54.675 0.44168 54.675 54.333 54.774 0 15 8 2 0 0 0 0.034645 1 56449 30.205 30.205 1 1368700 809 3587 757 763 941 941 AETECQNTEYQQLLDIK 17 Unmodified _AETECQNTEYQQLLDIK_ 0 0 0 CON__P13645;P13645 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 MULTI-MSMS 210214_Eclipse_Hela_QC 1042.48767089844 2 1041.98605 2081.95755 1.1809 0.0012305 -0.18878 -0.00019671 0.99213 0.0010338 1042.48730420001 76.186 0.64696 76.186 75.88 76.527 0 60 12 6 0 0 0 1.19E-17 1 86405 138.24 129.93 1 46909000 + 810 63 758 764 942 942 AETEEGPDVLR 11 Unmodified _AETEEGPDVLR_ 0 0 0 Q15436 Q15436 Q15436 SEC23A Protein transport protein Sec23A MULTI-MSMS 210214_Eclipse_Hela_QC 608.296569824219 2 608.296224 1214.5779 0.39746 0.00024177 0.52458 0.0003191 0.92204 0.00056087 608.296565541999 34.698 0.53363 34.698 34.411 34.945 0 23 11 3 0 0 0 1.2551E-05 2 28007 113.62 94.351 1 12990000 811 2189 759 765 943;944 944 AETLEFNDVYQEVK 14 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AETLEFNDVYQEVK_ 1 0 0 Q08945 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 MULTI-MSMS 210214_Eclipse_Hela_QC 863.913208007812 2 863.91215 1725.80975 1.5866 0.0013707 0.11366 9.8196E-05 1.7003 0.0014689 863.912116392312 103.48 0.79605 103.48 103.09 103.88 0 61 15 5 0 0 0 4.2358E-07 3 124192 112.13 104.86 1 38334000 812 1889 760 766 945;946;947 946 AETLPEVEAELAQR 14 Unmodified _AETLPEVEAELAQR_ 0 0 0 Q13136 Q13136 Q13136 PPFIA1 Liprin-alpha-1 MULTI-MSMS 210214_Eclipse_Hela_QC 778.400085449219 2 778.401752 1554.78895 0.97524 0.00075913 -0.83041 -0.0006464 0.14483 0.00011273 778.401163559707 75.331 0.59796 75.331 75.053 75.651 0 25 11 3 0 0 0 0.00090579 2 85204 58.676 54.79 1 2583300 813 1948 761 767 948;949 948 AETLPGSGDSGPGTASLGPGVAETGTR 27 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AETLPGSGDSGPGTASLGPGVAETGTR_ 1 0 0 Q14151 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 MULTI-MSMS 210214_Eclipse_Hela_QC 1243.10363769531 2 1242.59607 2483.17759 1.8247 0.0022674 0.77427 0.0009621 2.599 0.0032295 1243.09752633375 85.391 0.59631 85.391 85.097 85.693 0 27 11 3 0 0 0 4.3798E-06 1 99299 97.579 90.54 1 3370100 814 2058 762 768 950 950 AETLSGLGDSGAAGAAALSSASSETGTR 28 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AETLSGLGDSGAAGAAALSSASSETGTR_ 1 0 0 Q15424 Q15424 Q15424 SAFB Scaffold attachment factor B1 MULTI-MSMS 210214_Eclipse_Hela_QC 1269.60729980469 2 1269.10172 2536.18888 2.2186 0.0028156 0.31914 0.00040502 2.5377 0.0032206 1269.60340857382 98.988 0.49739 98.988 98.71 99.207 0 33 9 5 0 0 0 1.3694E-91 2 118054 222.7 211.01 1 7849600 815 2184 763 769 951;952 951 AETPTESVSEPEVATK 16 Unmodified _AETPTESVSEPEVATK_ 0 0 0 P18858 P18858 P18858 LIG1 DNA ligase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 837.907897949219 2 837.907064 1673.79958 0.35872 0.00030057 0.24961 0.00020915 0.60833 0.00050973 837.90716259625 38.611 0.4433 38.611 38.392 38.835 0 23 8 3 0 0 0 0.00034741 1 33616 64.65 57.522 1 10739000 816 960 764 770 953 953 AETQEGEPIAK 11 Unmodified _AETQEGEPIAK_ 0 0 0 Q9UNP9 Q9UNP9 Q9UNP9 PPIE Peptidyl-prolyl cis-trans isomerase E MULTI-MSMS 210214_Eclipse_Hela_QC 586.79345703125 2 586.793318 1171.57208 0.025626 1.5037E-05 0.16052 9.4189E-05 0.18614 0.00010923 586.793264667627 19.274 0.49759 19.274 18.921 19.419 0 21 9 4 0 0 0 0.00063399 1 6107 76.827 54.087 1 3281600 817 3962 765 771 954 954 AETVPEEANYEAVPVEAYGLAMLR 24 Unmodified _AETVPEEANYEAVPVEAYGLAMLR_ 0 0 0 Q92917 Q92917 Q92917 GPKOW G patch domain and KOW motifs-containing protein MULTI-MSMS 210214_Eclipse_Hela_QC 1312.14416503906 2 1311.64144 2621.26832 1.9653 0.0025778 -0.68817 -0.00090263 1.2771 0.0016752 1312.64197978485 106.57 0.19923 106.57 106.42 106.62 0 8 3 3 0 0 0 0.0007826 1 128740 46.89 40.483 1 18593000 818 2922 766 772 955 955 AEVAAEFLNDR 11 Unmodified _AEVAAEFLNDR_ 0 0 0 Q8TBC4 Q8TBC4 Q8TBC4 UBA3 NEDD8-activating enzyme E1 catalytic subunit MULTI-MSMS 210214_Eclipse_Hela_QC 617.805908203125 2 617.806759 1233.59897 0.66076 0.00040822 -0.18587 -0.00011483 0.47489 0.00029339 617.80642364492 57.559 0.64722 57.559 57.163 57.81 0 26 12 3 0 0 0 4.4579E-05 2 60358 102.06 87.395 1 7148700 819 2790 767 773 956;957 957 AEVAAIYEPPQIGTQNSLELLEDPK 25 Unmodified _AEVAAIYEPPQIGTQNSLELLEDPK_ 0 0 0 Q8TAT6 Q8TAT6 Q8TAT6 NPLOC4 Nuclear protein localization protein 4 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 1363.70288085938 2 1363.20017 2724.38579 1.6607 0.0022638 -2.5775 -0.0035136 -0.91679 -0.0012498 1363.70000544358 105.11 0.24961 105.11 104.98 105.23 0 14 4 4 0 0 0 0.0001431 1 126746 54.281 45.896 1 15453000 820 2787 768 774 958 958 AEVDMDTDAPQVSHK 15 Unmodified _AEVDMDTDAPQVSHK_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 210214_Eclipse_Hela_QC 548.248962402344 3 548.25076 1641.73045 0.58766 0.00032218 -1.5129 -0.00082943 -0.9252 -0.00050724 548.249721709979 29.715 0.74564 29.715 29.38 30.125 0 33 14 4 0 0 0 0.050604 1 20941 20.737 11.916 1 8674500 821 2070 769 775 959 959 AEVDMDTDAPQVSHKPGGEPK 21 Unmodified _AEVDMDTDAPQVSHKPGGEPK_ 0 0 1 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 210214_Eclipse_Hela_QC 552.761352539062 4 552.761392 2207.01646 0.25458 0.00014072 -0.10428 -5.7645E-05 0.1503 8.3078E-05 553.012065537437 27.554 0.5416 27.554 27.303 27.845 0 18 10 2 0 0 0 0.0039897 1 17903 36.454 34.803 1 15234000 822 2070 770 776 960 960 AEVDMDTDAPQVSHKPGGEPK 21 Unmodified _AEVDMDTDAPQVSHKPGGEPK_ 0 0 1 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 210214_Eclipse_Hela_QC 736.680297851562 3 736.67943 2207.01646 0.68347 0.0005035 -0.033421 -2.4621E-05 0.65005 0.00047888 737.013727405442 27.564 0.83603 27.564 27.303 28.139 0 33 16 4 0 0 0 0.0025437 1 17979 41.615 37.895 1 13563000 823 2070 770 776 961 961 AEVEQVELPDGK 12 Unmodified _AEVEQVELPDGK_ 0 0 0 Q9NW13 Q9NW13 Q9NW13 RBM28 RNA-binding protein 28 MULTI-MSMS 210214_Eclipse_Hela_QC 657.835144042969 2 657.332807 1312.65106 1.0297 0.00067688 -0.073898 -4.8576E-05 0.95584 0.0006283 657.333238069454 47.249 0.89531 47.249 46.777 47.672 0 24 17 2 0 0 0 0.00023027 1 46042 83.862 62.96 1 8692000 824 3698 771 777 962 962 AEVEVADELLENLAK 15 Unmodified _AEVEVADELLENLAK_ 0 0 0 Q7L5D6 Q7L5D6 Q7L5D6 GET4 Golgi to ER traffic protein 4 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 821.931091308594 2 821.930342 1641.84613 0.98774 0.00081185 0.49657 0.00040815 1.4843 0.00122 821.930484706559 105.5 0.29914 105.5 105.33 105.63 0 12 5 3 0 0 0 0.00018293 1 127217 93.623 85.134 1 19304000 825 2521 772 778 963 963 AEVIMNYHVGETVLSLQK 18 Unmodified _AEVIMNYHVGETVLSLQK_ 0 0 0 Q15393 Q15393 Q15393 SF3B3 Splicing factor 3B subunit 3 MULTI-MSMS 210214_Eclipse_Hela_QC 678.025512695312 3 677.69083 2030.05066 0.90951 0.00061637 -0.29784 -0.00020184 0.61167 0.00041453 678.025139302842 78.14 0.64732 78.14 77.821 78.468 0 36 12 4 0 0 0 0.00013247 2 89297 60.317 50.786 1 11722000 826 2180 773 779 964;965 965 AEVLISTVGPEDCVVPFLTRPK 22 Unmodified _AEVLISTVGPEDCVVPFLTRPK_ 0 0 1 P56192 P56192 P56192 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 210214_Eclipse_Hela_QC 810.105102539062 3 809.769921 2426.28793 1.6557 0.0013407 -0.28436 -0.00023027 1.3713 0.0011105 810.10420671884 97.392 0.84587 97.392 96.919 97.765 0 62 16 5 0 0 0 3.1553E-10 1 115922 111.49 106.73 1 21098000 827 1551 774 780 966 966 AEVLSEEPILK 11 Unmodified _AEVLSEEPILK_ 0 0 0 Q7L1Q6 Q7L1Q6 Q7L1Q6 BZW1 Basic leucine zipper and W2 domain-containing protein 1 MULTI-SECPEP 210214_Eclipse_Hela_QC 614.297729492188 2 614.345186 1226.67582 0.61626 0.0003786 -0.13147 -8.0765E-05 0.48479 0.00029783 614.345020832036 59.113 0.54718 59.113 58.806 59.353 0 37 10 4 0 0 0 0.00087309 1 62825 113.62 102.26 1 54438000 828 2512 775 781 967 967 AEVLWLMGAK 10 Unmodified _AEVLWLMGAK_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 210214_Eclipse_Hela_QC 559.30810546875 2 559.307352 1116.60015 0.65585 0.00036682 -0.058217 -3.2561E-05 0.59764 0.00033426 559.307205775777 82.643 0.63506 82.643 82.521 83.156 0 29 13 3 0 0 0 0.0049562 1 95576 58.596 32.657 1 8093000 829 525 776 782 968 968 AEVQVLVLDGR 11 Unmodified _AEVQVLVLDGR_ 0 0 0 P40429 P40429 P40429 RPL13A 60S ribosomal protein L13a MULTI-MSMS 210214_Eclipse_Hela_QC 599.843688964844 2 599.843145 1197.67174 0.50849 0.00030502 0.87941 0.00052751 1.3879 0.00083252 599.843545471455 66.318 0.54762 66.318 65.901 66.448 0 16 10 2 0 0 0 0.0033755 1 72699 57.532 38.438 1 2412300 830 1241 777 783 969 969 AEVQVLVLDGR 11 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AEVQVLVLDGR_ 1 0 0 P40429 P40429 P40429 RPL13A 60S ribosomal protein L13a MULTI-MSMS 210214_Eclipse_Hela_QC 620.849304199219 2 620.848427 1239.6823 0.62205 0.0003862 -0.077125 -4.7883E-05 0.54493 0.00033832 620.848324029238 104.84 0.7477 104.84 104.43 105.18 0 37 14 4 0 0 0 1.5563E-05 1 126160 106.29 87.851 1 19257000 831 1241 777 784 970 970 AEVTEEVEDGKEEDEEEETENSLPIPASK 29 Unmodified _AEVTEEVEDGKEEDEEEETENSLPIPASK_ 0 0 1 Q9H2G2 Q9H2G2 Q9H2G2 SLK STE20-like serine/threonine-protein kinase MULTI-MSMS 210214_Eclipse_Hela_QC 1078.484375 3 1078.15108 3231.43142 0.068092 7.3414E-05 0.56421 0.00060831 0.63231 0.00068172 1078.48583117909 65.956 0.54758 65.956 65.702 66.249 0 44 10 6 0 0 0 0.017749 1 72247 32.434 30.24 1 11438000 832 3438 778 785 971 971 AEVTLDGVWPTDK 13 Unmodified _AEVTLDGVWPTDK_ 0 0 0 P52948 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-SECPEP 210214_Eclipse_Hela_QC 715.650756835938 2 715.861731 1429.70891 0.61886 0.00044302 0.32325 0.0002314 0.94211 0.00067442 715.861915345878 77.012 0.69664 77.012 76.776 77.473 0 32 13 3 0 0 0 0.00012357 1 87826 99.283 82.052 1 11808000 833 1488 779 786 972 972 AEVTMGDPHQQTLAR 15 Unmodified _AEVTMGDPHQQTLAR_ 0 0 0 Q13769 Q13769 Q13769 THOC5 THO complex subunit 5 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 551.938415527344 3 551.938628 1652.79405 0.2578 0.00014229 -0.14037 -7.7476E-05 0.11743 6.4815E-05 551.938614978717 29.255 0.54686 29.255 29.032 29.579 0 23 10 3 0 0 0 0.042927 1 20261 17.465 9.5541 1 6835000 834 2033 780 787 973 973 AEVTMGDPHQQTLAR 15 Unmodified _AEVTMGDPHQQTLAR_ 0 0 0 Q13769 Q13769 Q13769 THOC5 THO complex subunit 5 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 827.906188964844 2 827.404303 1652.79405 0.77338 0.0006399 -0.099207 -8.2084E-05 0.67417 0.00055781 827.404267146576 29.184 0.29816 29.184 29.082 29.38 0 9 5 2 0 0 0 0.0034176 1 20347 49.5 35.081 1 1607400 835 2033 780 787 974 974 AEVVDEIAAK 10 Unmodified _AEVVDEIAAK_ 0 0 0 Q8TAT6 Q8TAT6 Q8TAT6 NPLOC4 Nuclear protein localization protein 4 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 522.782348632812 2 522.782222 1043.54989 0.042388 2.216E-05 0.26427 0.00013815 0.30665 0.00016031 522.782322970083 37.556 0.53843 37.556 37.306 37.845 0 18 10 2 0 0 0 0.029481 1 32116 40.994 40.994 1 10205000 836 2787 781 788 975 975 AEVVETTQVYTEEETR 16 Unmodified _AEVVETTQVYTEEETR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 942.951721191406 2 942.447085 1882.87962 1.5022 0.0014157 0.4106 0.00038697 1.9128 0.0018027 942.447526274241 50.163 0.44859 50.163 49.931 50.38 0 21 8 3 0 0 0 4.4602E-16 1 50037 136.27 130.04 1 5588700 837 2158 782 789 976 976 AEVVETTQVYTEEETRR 17 Unmodified _AEVVETTQVYTEEETRR_ 0 0 1 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 681.002258300781 3 680.667519 2038.98073 0.27214 0.00018524 0.081218 5.5283E-05 0.35336 0.00024052 681.001973753951 41.183 0.84495 41.183 40.86 41.705 0 71 16 6 0 0 0 6.6479E-46 1 37222 149.3 126.49 1 69920000 838 2158 783 790 977 977 AEVVETTQVYTEEETRR 17 Unmodified _AEVVETTQVYTEEETRR_ 0 0 1 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 1020.99914550781 2 1020.49764 2038.98073 0.89398 0.0009123 -0.38039 -0.00038818 0.51359 0.00052412 1020.99856381146 41.169 0.4474 41.169 40.959 41.407 0 15 8 3 0 0 0 0.017389 1 37472 39.266 31.355 1 3895000 839 2158 783 790 978 978 AEVVLGNIIK 10 Unmodified _AEVVLGNIIK_ 0 0 0 Q13303 Q13303 Q13303 KCNAB2 Voltage-gated potassium channel subunit beta-2 MSMS 210214_Eclipse_Hela_QC 528.327331542969 2 528.326599 1054.63865 NaN NaN NaN NaN NaN NaN NaN 66.499 1 66.499 65.999 66.999 0 0 0 0 0.030277 1 73035 52.716 30.224 1 840 1969 784 791 979 979 AEVWDLDMLR 10 Unmodified _AEVWDLDMLR_ 0 0 0 Q6P2E9 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 MULTI-MSMS 210214_Eclipse_Hela_QC 624.30908203125 2 624.308081 1246.60161 1.5735 0.00098237 -0.74016 -0.00046209 0.83338 0.00052028 624.30770368712 93.623 0.64606 93.623 93.29 93.936 0 33 12 4 0 0 0 0.00094132 1 110666 80.239 58.091 1 5633700 841 2449 785 792 980 980 AEWQVYK 7 Unmodified _AEWQVYK_ 0 0 0 Q00059 Q00059 Q00059 TFAM Transcription factor A, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 462.234344482422 2 462.23471 922.454868 0.059413 2.7463E-05 0.61151 0.00028266 0.67092 0.00031012 462.234992591283 37.648 0.99175 37.648 37.35 38.342 0 33 19 3 0 0 0 0.0067719 1 32166 88.734 47.232 1 16465000 842 1793 786 793 981 981 AEYEGDGIPTVFVAVAGR 18 Unmodified _AEYEGDGIPTVFVAVAGR_ 0 0 0 P22234 P22234 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase MULTI-MSMS 210214_Eclipse_Hela_QC 926.471374511719 2 925.96779 1849.92103 1.7189 0.0015917 -0.38654 -0.00035793 1.3324 0.0012337 925.967408402056 97.257 1.0443 97.257 96.82 97.864 0 84 20 5 0 0 0 1.123E-05 1 115491 94.122 87.233 1 83138000 843 1007 787 794 982 982 AEYFDGSEPVQNR 13 Unmodified _AEYFDGSEPVQNR_ 0 0 0 Q9HCS7 Q9HCS7 Q9HCS7 XAB2 Pre-mRNA-splicing factor SYF1 MULTI-MSMS 210214_Eclipse_Hela_QC 756.843627929688 2 756.341694 1510.66884 0.57078 0.0004317 0.63285 0.00047865 1.2036 0.00091035 756.342022684856 41.106 0.39781 41.106 40.86 41.258 0 17 7 3 0 0 0 0.00047403 1 37270 67.726 65.571 1 3383700 844 3562 788 795 983 983 AEYLASIFGTEK 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AEYLASIFGTEK_ 1 0 0 P0DN76;Q01081;Q8WU68 P0DN76 P0DN76 U2AF1;U2AF1L4 Splicing factor U2AF 35 kDa subunit;Splicing factor U2AF 26 kDa subunit MULTI-MSMS 210214_Eclipse_Hela_QC 685.846252441406 2 685.84555 1369.67655 1.2244 0.00083972 0.45808 0.00031418 1.6824 0.0011539 685.845860220778 111.22 0.59793 111.22 111 111.59 0 31 11 4 0 0 0 5.4813E-18 1 135028 201.84 183.06 1 56592000 845 793 789 796 984 984 AEYLASIFGTEK 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AEYLASIFGTEK_ 1 0 0 P0DN76;Q01081;Q8WU68 P0DN76 P0DN76 U2AF1;U2AF1L4 Splicing factor U2AF 35 kDa subunit;Splicing factor U2AF 26 kDa subunit MULTI-MSMS 210214_Eclipse_Hela_QC 1371.92980957031 1 1370.68382 1369.67655 1.9142 0.0026237 1.3828 0.0018953 3.2969 0.004519 1370.68574889545 111.22 0.39851 111.22 111 111.39 0 18 7 4 0 0 0 0.0076426 1 135256 45.137 40.524 1 16736000 846 793 789 796 985 985 AEYPFSSEQK 10 Unmodified _AEYPFSSEQK_ 0 0 0 P98194 P98194 P98194 ATP2C1 Calcium-transporting ATPase type 2C member 1 MULTI-MSMS 210214_Eclipse_Hela_QC 593.275085449219 2 593.274761 1184.53497 0.47418 0.00028132 1.3354 0.00079229 1.8096 0.0010736 593.77693703445 33.675 0.63859 33.675 33.477 34.116 0 23 12 3 0 0 0 0.028646 1 26609 41.448 25.245 1 4975300 847 1791 790 797 986 986 AEYSYVK 7 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AEYSYVK_ 1 0 0 Q14331 Q14331 Q14331 FRG1 Protein FRG1 MULTI-SECPEP 210214_Eclipse_Hela_QC 901.956604003906 1 901.430175 900.422899 1.033 0.00093119 0.034676 3.1258E-05 1.0677 0.00096244 901.430426800554 49.063 0.39833 49.063 48.839 49.237 0 13 7 2 0 0 0 0.029206 1 48657 70.912 61.163 1 2457500 848 2081 791 798 987 987 AEYTEASGPCILTPHR 16 Unmodified _AEYTEASGPCILTPHR_ 0 0 0 Q96SZ5 Q96SZ5 Q96SZ5 ADO 2-aminoethanethiol dioxygenase MULTI-MSMS 210214_Eclipse_Hela_QC 601.2900390625 3 601.289437 1800.84648 1.1479 0.00069021 0.95232 0.00057262 2.1002 0.0012628 601.290921816973 46.136 0.79636 46.136 45.781 46.578 0 30 15 3 0 0 0 0.0016554 1 44496 47.548 40.819 1 8179600 849 3145 792 799 988 988 AFAAGADIK 9 Unmodified _AFAAGADIK_ 0 0 0 P30084 P30084 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 432.234405517578 2 432.23471 862.454868 -0.39705 -0.00017162 0.9342 0.0004038 0.53716 0.00023218 432.235148472567 28.667 0.9493 28.667 27.845 28.794 0 37 19 3 0 0 0 0.0018218 1 19598 79.474 28.576 1 56064000 850 1117 793 800 989 989 AFAAQEDLEK 10 Unmodified _AFAAQEDLEK_ 0 0 0 P35241 P35241 P35241 RDX Radixin MULTI-MSMS 210214_Eclipse_Hela_QC 561.277221679688 2 561.277303 1120.54005 0.28123 0.00015785 0.12608 7.0764E-05 0.40731 0.00022861 561.277323962937 33.644 0.78493 33.644 33.181 33.966 0 56 15 5 0 0 0 0.00076481 1 26490 82.426 69.838 1 48423000 851 1180 794 801 990 990 AFAAVPTSHPPEDAPAQPPTPGPAASPEQLSFR 33 Unmodified _AFAAVPTSHPPEDAPAQPPTPGPAASPEQLSFR_ 0 0 0 Q14160 Q14160 Q14160 SCRIB Protein scribble homolog MULTI-MSMS 210214_Eclipse_Hela_QC 1114.22509765625 3 1113.55286 3337.63675 0.90485 0.0010076 0.81108 0.00090318 1.7159 0.0019108 1113.88782299919 77.153 0.448 77.153 76.925 77.373 0 23 8 4 0 0 0 0.019853 1 87944 20.038 14.197 1 3558700 852 2062 795 802 991 991 AFADAMEVIPSTLAENAGLNPISTVTELR 29 Unmodified _AFADAMEVIPSTLAENAGLNPISTVTELR_ 0 0 0 P50991 P50991 P50991 CCT4 T-complex protein 1 subunit delta MULTI-MSMS 210214_Eclipse_Hela_QC 1011.18737792969 3 1010.85326 3029.53795 1.1936 0.0012066 -0.65428 -0.00066138 0.53934 0.0005452 1011.18714040579 109.58 0.3491 109.58 109.4 109.75 0 28 6 6 0 0 0 5.0477E-24 1 132821 130.78 120.64 1 32776000 853 1429 796 803 992 992 AFAETHIK 8 Unmodified _AFAETHIK_ 0 0 0 P42704 P42704 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 458.748077392578 2 458.747985 915.481417 0.1437 6.5921E-05 0.53057 0.0002434 0.67426 0.00030932 458.748013548219 20.485 0.4982 20.485 20.214 20.712 0 26 9 4 0 0 0 0.046133 1 7858 43.218 34.396 1 51252000 854 1278 797 804 993 993 AFAETYPAASSLPNGDCGRPR 21 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AFAETYPAASSLPNGDCGRPR_ 1 0 1 P30520 P30520 P30520 ADSS Adenylosuccinate synthetase isozyme 2 MULTI-MSMS 210214_Eclipse_Hela_QC 1140.53210449219 2 1140.02912 2278.04368 1.1608 0.0013234 0.24499 0.00027929 1.4058 0.0016027 1140.02912642025 73.674 0.49754 73.674 73.41 73.907 0 35 9 5 0 0 0 7.2772E-07 1 83029 85.288 75.509 1 12653000 855 1127 798 805 994 994 AFAHITGGGLLENIPR 16 Unmodified _AFAHITGGGLLENIPR_ 0 0 0 P22102 P22102 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 210214_Eclipse_Hela_QC 556.308837890625 3 555.973889 1664.89984 0.84155 0.00046788 -0.30873 -0.00017165 0.53281 0.00029623 555.973714261464 72.77 0.74718 72.77 72.463 73.21 0 53 14 5 0 0 0 0.00019983 1 81636 61.409 50.465 1 27726000 856 1006 799 806 995 995 AFAISGPFNVQFLVK 15 Unmodified _AFAISGPFNVQFLVK_ 0 0 0 P31327 P31327 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 819.457580566406 2 819.456133 1636.89771 2.0256 0.0016599 0.22148 0.0001815 2.2471 0.0018414 819.456198139813 106.69 0.39043 106.69 106.57 106.96 0 23 7 5 0 0 0 1.6556E-10 1 128845 147.91 125.03 1 134110000 857 1141 800 807 996 996 AFALEVIK 8 Unmodified _AFALEVIK_ 0 0 0 Q9H2U2 Q9H2U2 Q9H2U2 PPA2 Inorganic pyrophosphatase 2, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 445.771148681641 2 445.770929 889.527304 0.27623 0.00012314 -0.06079 -2.7099E-05 0.21544 9.6038E-05 445.77083396545 64.984 0.59785 64.984 64.656 65.254 0 29 11 3 0 0 0 0.0077355 1 70854 71.342 33.209 1 11581000 858 3447 801 808 997 997 AFALGILK 8 Unmodified _AFALGILK_ 0 0 0 Q5VZE5 Q5VZE5 Q5VZE5 NAA35 N-alpha-acetyltransferase 35, NatC auxiliary subunit MULTI-MSMS 210214_Eclipse_Hela_QC 416.768676757812 2 416.768189 831.521825 0.43921 0.00018305 0.057578 2.3997E-05 0.49679 0.00020704 416.768113935948 72.618 0.54773 72.618 72.363 72.911 0 15 10 2 0 0 0 0.050635 1 81540 41.502 24.575 1 1479900 859 2386 802 809 998 998 AFALNDLDDYEK 12 Unmodified _AFALNDLDDYEK_ 0 0 0 Q14166 Q14166 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 MULTI-MSMS 210214_Eclipse_Hela_QC 707.833984375 2 707.330264 1412.64598 0.83886 0.00059335 1.1557 0.00081749 1.9946 0.0014108 707.33151113036 75.334 0.7373 75.334 75.053 75.79 0 42 14 5 0 0 0 5.3424E-05 1 85205 98.943 85.351 1 8380200 860 2064 803 810 999 999 AFAMIIDK 8 Unmodified _AFAMIIDK_ 0 0 0 Q15365;Q15366 Q15365;Q15366 Q15365 PCBP1;PCBP2 Poly(rC)-binding protein 1;Poly(rC)-binding protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 455.250885009766 2 454.749139 907.483725 0.76604 0.00034836 1.0093 0.00045897 1.7753 0.00080733 454.749711031911 57.975 0.84635 57.975 57.611 58.458 0 57 16 5 0 0 0 0.012977 3 60792 62.573 34.044 1 96636000 861 2174;2175 804 811 1000;1001;1002 1000 AFAMTNQILVEK 12 Unmodified _AFAMTNQILVEK_ 0 0 0 P31327 P31327 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 683.368347167969 2 682.865763 1363.71697 0.99673 0.00068063 -0.11368 -7.7631E-05 0.88305 0.000603 682.865834399528 67.685 1.5246 67.685 67.229 68.753 0 97 30 5 0 0 0 8.8248E-06 1 74389 111.06 97.937 1 149570000 862 1141 805 812 1003 1003 AFAMTNQILVEK 12 Oxidation (M) _AFAM(Oxidation (M))TNQILVEK_ AFAM(1)TNQILVEK AFAM(79)TNQILVEK 0 1 0 P31327 P31327 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 690.863830566406 2 690.86322 1379.71189 0.99517 0.00068753 -0.6084 -0.00042032 0.38677 0.00026721 691.364289180996 67.709 0.74529 67.709 67.411 68.157 0 26 10 3 0 0 0 0.00080418 2 74575 78.655 68.132 1 9693100 863 1141 805 813 1004;1005 1004 291 AFANPEDALR 10 Unmodified _AFANPEDALR_ 0 0 0 O14684 O14684 O14684 PTGES Prostaglandin E synthase MULTI-MSMS 210214_Eclipse_Hela_QC 552.278076171875 2 552.277638 1102.54072 0.93313 0.00051535 0.14855 8.2039E-05 1.0817 0.00059738 552.277705986578 50.951 0.8705 50.951 50.528 51.399 0 33 17 2 0 0 0 0.0016985 1 50907 70.856 46.901 1 59500000 864 200 806 814 1006 1006 AFAVGVQQVLLK 12 Unmodified _AFAVGVQQVLLK_ 0 0 0 O95373 O95373 O95373 IPO7 Importin-7 MULTI-MSMS 210214_Eclipse_Hela_QC 636.887878417969 2 636.887355 1271.76016 1.1295 0.00071937 0.44204 0.00028153 1.5716 0.0010009 636.887600537807 79.426 0.84583 79.426 79.115 79.961 0 52 16 4 0 0 0 1.4011E-05 1 90905 106.91 96.153 1 40353000 865 564 807 815 1007 1007 AFCADQLDVFLQK 13 Unmodified _AFCADQLDVFLQK_ 0 0 0 Q9P2N5 Q9P2N5 Q9P2N5 RBM27 RNA-binding protein 27 MULTI-MSMS 210214_Eclipse_Hela_QC 777.886047363281 2 777.884684 1553.75481 1.302 0.0010128 0.14941 0.00011623 1.4514 0.001129 777.884532739936 94.579 0.54173 94.579 94.284 94.826 0 26 10 3 0 0 0 0.00065931 1 112001 65.719 50.09 1 3061200 866 3805 808 816 1008 1008 AFCEPGNVENNGVLSFIK 18 Unmodified _AFCEPGNVENNGVLSFIK_ 0 0 0 P54577 P54577 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 998.488647460938 2 997.985657 1993.95676 1.6247 0.0016215 0.42973 0.00042886 2.0545 0.0020503 998.488018567433 92.419 1.443 92.419 91.748 93.191 0 90 28 6 0 0 0 4.5356E-05 1 108906 91.858 88.536 1 62401000 867 1515 809 817 1009 1009 AFCGFEDPR 9 Unmodified _AFCGFEDPR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 549.737548828125 2 549.737291 1097.46003 0.33179 0.0001824 -0.20801 -0.00011435 0.12378 6.8048E-05 549.737272107254 45.816 0.84624 45.816 45.483 46.329 0 47 16 4 0 0 0 0.026794 1 43679 45.68 35.542 1 34954000 868 2158 810 818 1010 1010 AFCTGLDSVLQPYR 14 Unmodified _AFCTGLDSVLQPYR_ 0 0 0 Q9UGJ1 Q9UGJ1 Q9UGJ1 TUBGCP4 Gamma-tubulin complex component 4 MULTI-MSMS 210214_Eclipse_Hela_QC 814.404052734375 2 813.900865 1625.78718 1.162 0.00094578 -0.88828 -0.00072297 0.27376 0.00022281 814.401170447879 86.374 0.99403 86.374 85.643 86.637 0 59 19 4 0 0 0 9.7148E-05 2 100141 84.268 69.002 1 7721800 869 3849 811 819 1011;1012 1011 AFDCPETEYPVK 12 Unmodified _AFDCPETEYPVK_ 0 0 0 O43847 O43847 O43847 NRD1 Nardilysin MULTI-MSMS 210214_Eclipse_Hela_QC 728.828674316406 2 728.326667 1454.63878 1.1704 0.00085243 0.058865 4.2873E-05 1.2293 0.00089531 728.326587323202 49.629 0.59399 49.629 49.337 49.931 0 34 11 4 0 0 0 0.00019041 1 49312 86.624 72.855 1 13645000 870 346 812 820 1013 1013 AFDIIER 7 Unmodified _AFDIIER_ 0 0 0 Q8N1F7 Q8N1F7 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 MULTI-MSMS 210214_Eclipse_Hela_QC 432.234954833984 2 432.23471 862.454868 0.68398 0.00029564 0.061387 2.6534E-05 0.74536 0.00032217 432.234720545243 50.969 0.57199 50.969 50.727 51.299 0 20 11 2 0 0 0 0.017397 1 51147 67.344 27.582 1 10275000 871 2669 813 821 1014 1014 AFDLFNPNFK 10 Unmodified _AFDLFNPNFK_ 0 0 0 Q9Y3D9 Q9Y3D9 Q9Y3D9 MRPS23 28S ribosomal protein S23, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 606.806335449219 2 606.806031 1211.59751 0.93476 0.00056722 0.47989 0.0002912 1.4146 0.00085841 606.80597432059 87.51 1.3424 87.51 86.687 88.03 0 62 26 4 0 0 0 0.0002417 1 102165 98.299 86.809 1 11812000 872 4066 814 822 1015 1015 AFDLIVDRPVTLVR 14 Unmodified _AFDLIVDRPVTLVR_ 0 0 1 O96000 O96000 O96000 NDUFB10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 MULTI-MSMS 210214_Eclipse_Hela_QC 538.650512695312 3 538.650635 1612.93008 -0.090047 -4.8504E-05 -0.078285 -4.2168E-05 -0.16833 -9.0672E-05 538.650678185249 82.42 0.66053 82.42 82.197 82.857 0 25 14 2 0 0 0 0.0015874 1 95202 54.09 45.913 1 20025000 873 612 815 823 1016 1016 AFDLVPPEAVPEQK 14 Unmodified _AFDLVPPEAVPEQK_ 0 0 0 Q96G03 Q96G03 Q96G03 PGM2 Phosphoglucomutase-2 MULTI-MSMS 210214_Eclipse_Hela_QC 770.408203125 2 770.406306 1538.79806 1.6362 0.0012605 0.21952 0.00016912 1.8557 0.0014296 770.406049868158 77.547 0.74637 77.547 77.274 78.02 0 36 14 4 0 0 0 0.0008588 1 88341 59.426 49.054 1 13365000 874 3035 816 824 1017 1017 AFDMISQR 8 Unmodified _AFDMISQR_ 0 0 0 O14908 O14908 O14908 GIPC1 PDZ domain-containing protein GIPC1 MULTI-MSMS 210214_Eclipse_Hela_QC 484.237060546875 2 484.236927 966.459301 0.47919 0.00023204 0.010194 4.9363E-06 0.48939 0.00023698 484.236893590563 42.986 0.54765 42.986 42.696 43.244 0 16 10 2 0 0 0 0.0034742 1 39833 86.794 53.056 1 5491800 875 216 817 825 1018 1018 AFDQGADAIYDHINEGK 17 Unmodified _AFDQGADAIYDHINEGK_ 0 0 0 Q9UDW1 Q9UDW1 Q9UDW1 UQCR10 Cytochrome b-c1 complex subunit 9 MULTI-MSMS 210214_Eclipse_Hela_QC 621.955993652344 3 621.955112 1862.84351 1.3029 0.00081037 0.44745 0.00027829 1.7504 0.0010887 621.955353968622 60.899 0.69534 60.899 60.498 61.193 0 51 13 6 0 0 0 0.0001224 1 64966 56.746 52.842 1 23277000 876 3837 818 826 1019 1019 AFDSGIIPMEFVNK 14 Oxidation (M) _AFDSGIIPM(Oxidation (M))EFVNK_ AFDSGIIPM(1)EFVNK AFDSGIIPM(47)EFVNK 0 1 0 P53396 P53396 P53396 ACLY ATP-citrate synthase MULTI-MSMS 210214_Eclipse_Hela_QC 792.393310546875 2 792.392341 1582.77013 1.2165 0.00096391 0.68321 0.00054137 1.8997 0.0015053 792.393078719412 84.497 0.74642 84.497 84.251 84.997 0 22 14 2 0 0 0 0.015752 1 98192 47.261 32.841 1 4434400 877 1495 819 827 1020 1020 360 AFDSGIIPMEFVNK 14 Unmodified _AFDSGIIPMEFVNK_ 0 0 0 P53396 P53396 P53396 ACLY ATP-citrate synthase MULTI-MSMS 210214_Eclipse_Hela_QC 784.396057128906 2 784.394884 1566.77522 1.7786 0.0013951 0.42232 0.00033126 2.2009 0.0017264 784.395422822008 98.038 1.044 98.038 97.616 98.66 0 66 20 5 0 0 0 2.1518E-06 1 116622 130.01 116.07 1 47703000 878 1495 819 828 1021 1021 AFDTAGNGYCR 11 Unmodified _AFDTAGNGYCR_ 0 0 0 P49327 P49327 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 210214_Eclipse_Hela_QC 616.262145996094 2 616.261662 1230.50877 -0.16856 -0.00010388 0.30631 0.00018877 0.13775 8.4892E-05 616.261941349915 27.222 0.6459 27.222 27.005 27.651 0 29 12 4 0 0 0 8.9544E-11 1 17413 141.52 138.51 1 24093000 879 1365 820 829 1022 1022 AFDTQLVER 9 Unmodified _AFDTQLVER_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MSMS 210214_Eclipse_Hela_QC 539.781616210938 2 539.780013 1077.54547 NaN NaN NaN NaN NaN NaN NaN 46.941 1 46.941 46.441 47.441 0 0 0 0 0.012826 1 45526 71.877 43.781 1 880 3267 821 830 1023 1023 AFDTQLVER 9 Unmodified _AFDTQLVER_ 0 0 0 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MSMS 210214_Eclipse_Hela_QC 539.780639648438 2 539.780013 1077.54547 NaN NaN NaN NaN NaN NaN NaN 47.062 1 47.062 46.562 47.562 0 0 0 0 0.028949 1 45692 58.23 34.462 1 881 3267 821 830 1024 1024 AFEALLSNIVK 11 Unmodified _AFEALLSNIVK_ 0 0 0 Q9Y2H6 Q9Y2H6 Q9Y2H6 FNDC3A Fibronectin type-III domain-containing protein 3A MULTI-MSMS 210214_Eclipse_Hela_QC 602.851196289062 2 602.850438 1203.68632 1.5087 0.00090953 -0.20359 -0.00012274 1.3051 0.00078679 602.850230762419 94.099 0.83997 94.099 93.787 94.627 0 34 16 3 0 0 0 0.00060257 1 111342 77.677 37.633 1 2758100 882 4004 822 831 1025 1025 AFEDDDITHVEGSVDPIR 18 Unmodified _AFEDDDITHVEGSVDPIR_ 0 0 0 Q9NTK5 Q9NTK5 Q9NTK5 OLA1 Obg-like ATPase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 672.65234375 3 672.316598 2013.92796 0.96048 0.00064575 0.10957 7.3667E-05 1.07 0.00071941 672.650970973959 72.351 0.69661 72.351 72.015 72.712 0 34 13 3 0 0 0 7.9216E-06 1 81042 71.558 68.323 1 23597000 883 3650 823 832 1026 1026 AFEDEMK 7 Unmodified _AFEDEMK_ 0 0 0 Q9Y6E2 Q9Y6E2 Q9Y6E2 BZW2 Basic leucine zipper and W2 domain-containing protein 2 MSMS 210214_Eclipse_Hela_QC 435.189666748047 2 435.189111 868.363669 NaN NaN NaN NaN NaN NaN NaN 26.948 1 26.948 26.448 27.448 0 0 0 0 0.030804 1 17053 71.715 47.528 1 884 4152 824 833 1027 1027 AFEDEMSGR 9 Unmodified _AFEDEMSGR_ 0 0 0 Q01082 Q01082 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 210214_Eclipse_Hela_QC 521.21923828125 2 521.218931 1040.42331 0.4785 0.0002494 0.30118 0.00015698 0.77968 0.00040639 521.219040101189 30.549 0.74761 30.549 30.225 30.973 0 34 14 3 0 0 0 0.0010216 1 22067 84.743 74.756 1 17829000 885 1809 825 834 1028 1028 AFEDTLQLMER 11 Unmodified _AFEDTLQLMER_ 0 0 0 O95163 O95163 O95163 IKBKAP Elongator complex protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 676.830810546875 2 676.829377 1351.6442 1.1015 0.0007455 -0.60564 -0.00040991 0.49582 0.00033559 676.828956563596 79.587 0.4973 79.587 79.264 79.761 0 23 9 3 0 0 0 2.3517E-05 1 91247 109.66 86.592 1 10199000 886 538 826 835 1029 1029 AFEEDQVAGR 10 Unmodified _AFEEDQVAGR_ 0 0 0 O43818 O43818 O43818 RRP9 U3 small nucleolar RNA-interacting protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 561.264343261719 2 561.264727 1120.5149 0.15149 8.5027E-05 0.12332 6.9218E-05 0.27482 0.00015424 561.264834988348 27.477 0.34757 27.477 27.254 27.601 0 15 6 3 0 0 0 1.2458E-05 1 17771 119.27 95.12 1 9913400 887 343 827 836 1030 1030 AFENCSEDLQER 12 Unmodified _AFENCSEDLQER_ 0 0 0 O75828 O75828 O75828 CBR3 Carbonyl reductase [NADPH] 3 MULTI-MSMS 210214_Eclipse_Hela_QC 749.317565917969 2 749.317362 1496.62017 0.73375 0.00054981 -0.0083738 -6.2747E-06 0.72538 0.00054354 749.31743927563 33.643 0.43933 33.643 33.427 33.867 0 20 8 3 0 0 0 0.00036297 1 26551 90.108 83.876 1 2996600 888 488 828 837 1031 1031 AFEPATGR 8 Unmodified _AFEPATGR_ 0 0 0 P49189 P49189 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase MULTI-MSMS 210214_Eclipse_Hela_QC 424.716369628906 2 424.716685 847.418816 -0.051728 -2.197E-05 -0.38321 -0.00016276 -0.43494 -0.00018473 424.716411887148 21.438 0.49845 21.438 21.26 21.759 0 19 9 3 0 0 0 0.0025521 1 9150 101.64 30.731 1 29418000 889 1360 829 838 1032 1032 AFEVSENGNLVVSGK 15 Unmodified _AFEVSENGNLVVSGK_ 0 0 0 P49327 P49327 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 210214_Eclipse_Hela_QC 775.899536132812 2 775.39647 1548.77839 1.2351 0.00095771 -0.040706 -3.1563E-05 1.1944 0.00092615 775.396418748597 59.797 0.99636 59.797 59.452 60.448 0 35 19 2 0 0 0 5.5497E-05 1 63418 88.187 77.663 1 22310000 890 1365 830 839 1033 1033 AFFAGSQR 8 Unmodified _AFFAGSQR_ 0 0 0 Q14697 Q14697 Q14697 GANAB Neutral alpha-glucosidase AB MULTI-MSMS 210214_Eclipse_Hela_QC 442.224731445312 2 442.224677 882.434801 -0.42364 -0.00018734 0.031688 1.4013E-05 -0.39195 -0.00017333 442.224650323199 27.279 0.59609 27.279 27.055 27.651 0 30 11 3 0 0 0 0.00054912 1 17467 120.65 53.61 1 75505000 891 2107 831 840 1034 1034 AFFESHPAPSAER 13 Unmodified _AFFESHPAPSAER_ 0 0 0 P55786 P55786 P55786 NPEPPS Puromycin-sensitive aminopeptidase MULTI-MSMS 210214_Eclipse_Hela_QC 482.899353027344 3 482.565119 1444.67353 0.5547 0.00026768 0.23839 0.00011504 0.79309 0.00038272 482.56520855238 29.868 0.84522 29.868 29.579 30.424 0 42 16 3 0 0 0 0.00010623 1 21089 62.042 55.856 1 22992000 892 1544 832 841 1035 1035 AFFESHPAPSAER 13 Unmodified _AFFESHPAPSAER_ 0 0 0 P55786 P55786 P55786 NPEPPS Puromycin-sensitive aminopeptidase MULTI-MSMS 210214_Eclipse_Hela_QC 723.344482421875 2 723.34404 1444.67353 1.0358 0.00074926 -0.24656 -0.00017835 0.78927 0.00057092 723.344187687627 29.844 0.64659 29.844 29.579 30.225 0 30 12 3 0 0 0 0.00016284 1 21124 83 71.51 1 9186900 893 1544 832 841 1036 1036 AFFPCFDTPAVK 12 Unmodified _AFFPCFDTPAVK_ 0 0 0 Q9H4A4 Q9H4A4 Q9H4A4 RNPEP Aminopeptidase B MULTI-MSMS 210214_Eclipse_Hela_QC 700.842346191406 2 700.339381 1398.66421 1.0449 0.00073176 -0.034918 -2.4455E-05 1.01 0.00070731 700.339168460674 85.536 1.3421 85.536 85.147 86.489 0 97 26 6 0 0 0 1.7765E-05 1 99315 113.62 95.803 1 35930000 894 3467 833 842 1037 1037 AFFSEVER 8 Unmodified _AFFSEVER_ 0 0 0 Q9UQ80 Q9UQ80 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 MULTI-MSMS 210214_Eclipse_Hela_QC 492.743682861328 2 492.742899 983.471246 0.44337 0.00021847 0.20565 0.00010133 0.64902 0.0003198 492.742931038181 47.83 1.714 47.83 47.473 49.187 0 77 34 5 0 0 0 0.0058243 2 46471 77.923 59.117 1 90754000 895 3978 834 843 1038;1039 1038 AFGAPVPSVQWLDEDGTTVLQDER 24 Unmodified _AFGAPVPSVQWLDEDGTTVLQDER_ 0 0 0 P32004 P32004 P32004 L1CAM Neural cell adhesion molecule L1 MULTI-MSMS 210214_Eclipse_Hela_QC 1316.14379882812 2 1315.64028 2629.26601 1.5293 0.002012 -0.30363 -0.00039947 1.2256 0.0016125 1316.14148929304 106.15 0.24875 106.15 106.07 106.32 0 15 4 5 0 0 0 4.1119E-86 1 128178 230.86 223.97 1 29684000 896 1155 835 844 1040 1040 AFGDVTAHLLQPCLVLR 17 Unmodified _AFGDVTAHLLQPCLVLR_ 0 0 0 Q14146 Q14146 Q14146 URB2 Unhealthy ribosome biogenesis protein 2 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 637.684204101562 3 637.348739 1909.02439 1.5193 0.00096833 -0.73009 -0.00046532 0.78922 0.00050301 637.682470104038 97.541 0.54686 97.541 97.268 97.815 0 21 10 3 0 0 0 0.054897 1 116190 17.078 12.32 1 1497400 897 2057 836 845 1041 1041 AFGFMTR 7 Unmodified _AFGFMTR_ 0 0 0 P61457 P61457 P61457 PCBD1 Pterin-4-alpha-carbinolamine dehydratase MULTI-MSMS 210214_Eclipse_Hela_QC 415.205352783203 2 415.204899 828.395244 0.62757 0.00026057 -0.12771 -5.3026E-05 0.49986 0.00020754 415.204769706031 50.368 0.84586 50.368 49.981 50.827 0 33 16 3 0 0 0 0.009315 1 50260 81.297 81.297 1 6046300 898 1617 837 846 1042 1042 AFGFSHLEALLDDSK 15 Unmodified _AFGFSHLEALLDDSK_ 0 0 0 Q96FW1 Q96FW1 Q96FW1 OTUB1 Ubiquitin thioesterase OTUB1 MULTI-MSMS 210214_Eclipse_Hela_QC 550.611328125 3 550.610505 1648.80969 0.93497 0.00051481 -0.014468 -7.9661E-06 0.92051 0.00050684 550.610474006777 92.192 0.89548 92.192 91.748 92.643 0 52 17 5 0 0 0 5.8682E-05 1 108589 80.706 76.237 1 11027000 899 3032 838 847 1043 1043 AFGGQSLK 8 Unmodified _AFGGQSLK_ 0 0 0 P31040 P31040 P31040 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 404.221801757812 2 404.221603 806.428653 0.00020723 8.3765E-08 1.5695 0.00063442 1.5697 0.00063451 404.222367079153 22.974 0.64814 22.974 22.803 23.451 0 21 12 3 0 0 0 0.004896 1 11369 81.119 30.082 1 21330000 900 1138 839 848 1044 1044 AFGHHAVSLLDGGLR 15 Unmodified _AFGHHAVSLLDGGLR_ 0 0 0 P25325 P25325 P25325 MPST 3-mercaptopyruvate sulfurtransferase MULTI-MSMS 210214_Eclipse_Hela_QC 517.278259277344 3 517.279313 1548.81611 0.33317 0.00017234 -1.0785 -0.00055787 -0.74529 -0.00038552 517.27845000923 54.849 0.79613 54.849 54.526 55.322 0 32 15 4 0 0 0 0.056864 1 56655 18.596 6.982 1 3394100 901 1041 840 849 1045 1045 AFGIPIR 7 Unmodified _AFGIPIR_ 0 0 0 P06493 P06493 P06493 CDK1 Cyclin-dependent kinase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 387.237457275391 2 387.237056 772.459559 0.94355 0.00036538 -0.5125 -0.00019846 0.43106 0.00016692 387.23680278107 57.158 0.89567 57.158 56.815 57.711 0 31 17 3 0 0 0 0.0065018 1 59792 90.939 30.535 1 7005600 902 698 841 850 1046 1046 AFGIPVR 7 Unmodified _AFGIPVR_ 0 0 0 Q00535 Q00535 Q00535 CDK5 Cyclin-dependent-like kinase 5 MULTI-MSMS 210214_Eclipse_Hela_QC 380.229370117188 2 380.229231 758.443909 -0.0069737 -2.6516E-06 0.5146 0.00019567 0.50763 0.00019302 380.229366967731 48.548 0.51952 48.548 48.269 48.789 0 14 10 2 0 0 0 0.036177 1 47732 52.231 20.118 1 2472000 903 1799 842 851 1047 1047 AFGPGLQGGSAGSPAR 16 Unmodified _AFGPGLQGGSAGSPAR_ 0 0 0 P21333 P21333 P21333 FLNA Filamin-A MULTI-MSMS 210214_Eclipse_Hela_QC 715.363525390625 2 715.362764 1428.71098 0.60483 0.00043267 0.17866 0.0001278 0.78349 0.00056048 715.362882668167 37.284 1.3796 37.284 36.863 38.242 0 83 27 5 0 0 0 6.8868E-12 2 31541 132.56 121.4 1 178160000 904 995 843 852 1048;1049 1048 AFGSGYR 7 Unmodified _AFGSGYR_ 0 0 0 P23588 P23588 P23588 EIF4B Eukaryotic translation initiation factor 4B MULTI-MSMS 210214_Eclipse_Hela_QC 379.184967041016 2 379.18502 756.355488 -0.92499 -0.00035074 0.68825 0.00026097 -0.23674 -8.9767E-05 379.185220217662 21.902 0.39774 21.902 21.709 22.107 0 19 7 3 0 0 0 0.0044886 1 9811 105.22 94.911 1 35242000 905 1028 844 853 1050 1050 AFGSSQPSLNGDIK 14 Unmodified _AFGSSQPSLNGDIK_ 0 0 0 P32004 P32004 P32004 L1CAM Neural cell adhesion molecule L1 MULTI-MSMS 210214_Eclipse_Hela_QC 710.858215332031 2 710.85698 1419.69941 0.71626 0.00050916 0.26618 0.00018921 0.98244 0.00069837 710.857102172932 45.858 0.54765 45.858 45.533 46.08 0 24 10 4 0 0 0 0.011346 1 43831 51.092 38.136 1 6928100 906 1155 845 854 1051 1051 AFGSTIVINPEK 12 Unmodified _AFGSTIVINPEK_ 0 0 0 Q13620 Q13620 Q13620 CUL4B Cullin-4B MULTI-MSMS 210214_Eclipse_Hela_QC 638.351318359375 2 638.350803 1274.68705 0.75458 0.00048169 0.07383 4.7129E-05 0.82841 0.00052882 638.350863588493 58.895 0.54797 58.895 58.656 59.204 0 27 10 3 0 0 0 0.00035246 1 62253 76.143 46.67 1 6715500 907 2023 846 855 1052 1052 AFGVAFVK 8 Unmodified _AFGVAFVK_ 0 0 0 Q9H7D0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 MULTI-MSMS 210214_Eclipse_Hela_QC 419.745513916016 2 419.744714 837.474875 0.56695 0.00023798 0.074851 3.1418E-05 0.64181 0.00026939 419.74463263514 58.115 0.44843 58.115 57.86 58.308 0 13 8 2 0 0 0 0.018913 1 61294 53.71 20.018 1 1198900 908 3496 847 856 1053 1053 AFGYVCGGEGQHQFFAIK 18 Unmodified _AFGYVCGGEGQHQFFAIK_ 0 0 0 P98082 P98082 P98082 DAB2 Disabled homolog 2 MULTI-MSMS 210214_Eclipse_Hela_QC 672.990295410156 3 672.652599 2014.93597 1.2331 0.00082944 0.33757 0.00022706 1.5706 0.0010565 672.986928155506 69.346 0.84612 69.346 69.029 69.875 0 46 16 5 0 0 0 0.001513 1 77051 30.107 27.21 1 6665200 909 1788 848 857 1054 1054 AFGYYGPLR 9 Unmodified _AFGYYGPLR_ 0 0 0 P84103 P84103 P84103 SRSF3 Serine/arginine-rich splicing factor 3 MULTI-MSMS 210214_Eclipse_Hela_QC 522.269104003906 2 522.269084 1042.52362 0.27747 0.00014491 -0.12718 -6.6422E-05 0.15029 7.8493E-05 522.268964946412 58.631 2.1394 58.631 57.86 59.999 0 120 42 4 0 0 0 1.0099E-05 2 61731 135.35 120.57 1 146020000 910 1785 849 858 1055;1056 1055 AFHAALR 7 Unmodified _AFHAALR_ 0 0 0 Q9BPX5 Q9BPX5 Q9BPX5 ARPC5L Actin-related protein 2/3 complex subunit 5-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 393.224273681641 2 393.22448 784.434407 0.034175 1.3438E-05 0.81224 0.00031939 0.84641 0.00033283 393.224333406645 20.834 0.54768 20.834 20.563 21.111 0 24 10 3 0 0 0 0.0056332 2 8293 98.03 82.394 1 14144000 911 3210 850 859 1057;1058 1058 AFHNEAQVNPER 12 Unmodified _AFHNEAQVNPER_ 0 0 0 P17987 P17987 P17987 TCP1 T-complex protein 1 subunit alpha MULTI-MSMS 210214_Eclipse_Hela_QC 706.339538574219 2 706.339289 1410.66403 0.52065 0.00036776 0.079 5.5801E-05 0.59965 0.00042356 706.339493907515 20.636 0.49792 20.636 20.364 20.862 0 27 9 5 0 0 0 2.7148E-11 1 8074 135.99 125.75 1 57501000 912 945 851 860 1059 1059 AFHNEAQVNPER 12 Unmodified _AFHNEAQVNPER_ 0 0 0 P17987 P17987 P17987 TCP1 T-complex protein 1 subunit alpha MULTI-MSMS 210214_Eclipse_Hela_QC 471.228485107422 3 471.228618 1410.66403 -0.074764 -3.5231E-05 0.037391 1.762E-05 -0.037372 -1.7611E-05 471.228715983258 20.631 0.84672 20.631 20.314 21.161 0 31 16 3 0 0 0 0.0047683 1 8076 38.189 23.214 1 50610000 913 945 851 860 1060 1060 AFHPTYEEK 9 Unmodified _AFHPTYEEK_ 0 0 0 Q9H3P7 Q9H3P7 Q9H3P7 ACBD3 Golgi resident protein GCP60 MULTI-MSMS 210214_Eclipse_Hela_QC 561.266479492188 2 561.266739 1120.51892 0.18805 0.00010555 -0.0047582 -2.6706E-06 0.18329 0.00010287 561.266698994811 20.887 0.59695 20.887 20.464 21.061 0 21 11 2 0 0 0 0.0041499 1 8382 67.494 42.643 1 12841000 914 3458 852 861 1061 1061 AFIHWVSQPLMCEVR 15 Unmodified _AFIHWVSQPLMCEVR_ 0 0 0 P47897 P47897 P47897 QARS Glutamine--tRNA ligase MULTI-MSMS 210214_Eclipse_Hela_QC 625.312927246094 3 624.97977 1871.91748 0.80169 0.00050104 -0.49733 -0.00031082 0.30436 0.00019022 624.979684505215 80.736 0.79472 80.736 80.408 81.203 0 49 15 5 0 0 0 3.1387E-05 1 92827 85.457 79.553 1 7514500 915 1331 853 862 1062 1062 AFIISFK 7 Unmodified _AFIISFK_ 0 0 0 Q9HAB8 Q9HAB8 Q9HAB8 PPCS Phosphopantothenate--cysteine ligase MULTI-MSMS 210214_Eclipse_Hela_QC 413.247467041016 2 413.247089 824.479626 0.30254 0.00012502 0.057295 2.3677E-05 0.35983 0.0001487 413.247042167905 71.625 0.59776 71.625 71.268 71.866 0 27 11 3 0 0 0 0.040296 1 80019 50.966 7.9657 1 3527400 916 3532 854 863 1063 1063 AFIITGQTYTR 11 Unmodified _AFIITGQTYTR_ 0 0 0 P30566 P30566 P30566 ADSL Adenylosuccinate lyase MSMS 210214_Eclipse_Hela_QC 635.844116210938 2 635.843145 1269.67174 NaN NaN NaN NaN NaN NaN NaN 56.463 1 56.463 55.963 56.963 0 0 0 0 0.017164 1 58946 56.563 19.087 1 917 1130 855 864 1064 1064 AFINLEAAGVGGK 13 Unmodified _AFINLEAAGVGGK_ 0 0 0 Q7Z2K6 Q7Z2K6 Q7Z2K6 ERMP1 Endoplasmic reticulum metallopeptidase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 623.843994140625 2 623.843145 1245.67174 0.5161 0.00032197 0.086296 5.3835E-05 0.6024 0.0003758 623.84317959291 68.728 0.57578 68.728 68.406 68.981 0 20 11 2 0 0 0 0.00019756 1 75918 96.015 80.353 1 11254000 918 2531 856 865 1065 1065 AFIPAIDSFGFETDLR 16 Unmodified _AFIPAIDSFGFETDLR_ 0 0 0 Q15029 Q15029 Q15029 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component MULTI-MSMS 210214_Eclipse_Hela_QC 900.457458496094 2 899.954152 1797.89375 1.2894 0.0011604 0.5886 0.00052972 1.878 0.0016901 899.954804901137 107.14 0.34861 107.14 107.01 107.36 0 22 6 5 0 0 0 0.058272 1 129605 28.361 12.989 1 44075000 919 2138 857 866 1066 1066 AFITNIPFDVK 11 Unmodified _AFITNIPFDVK_ 0 0 0 P52272 P52272 P52272 HNRNPM Heterogeneous nuclear ribonucleoprotein M MULTI-MSMS 210214_Eclipse_Hela_QC 633.351806640625 2 632.850438 1263.68632 0.86786 0.00054922 -0.22124 -0.00014001 0.64662 0.00040921 632.850214271125 89.744 0.69534 89.744 89.312 90.008 0 59 13 6 0 0 0 0.0008066 1 105128 89.886 80.672 1 87109000 920 1464 858 867 1067 1067 AFLACMR 7 Unmodified _AFLACMR_ 0 0 0 Q9NZB2 Q9NZB2 Q9NZB2 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 434.712280273438 2 434.712033 867.409514 0.23494 0.00010213 -0.59531 -0.00025879 -0.36037 -0.00015666 434.712048273368 41.929 0.69277 41.929 41.407 42.099 0 18 13 2 0 0 0 0.043051 1 38397 50.12 38.824 1 2692900 921 3760 859 868 1068 1068 AFLADPSAFVAAAPVAAATTAAPAAAAAPAK 31 Unmodified _AFLADPSAFVAAAPVAAATTAAPAAAAAPAK_ 0 0 0 P05388 P05388 P05388 RPLP0 60S acidic ribosomal protein P0 MULTI-MSMS 210214_Eclipse_Hela_QC 1377.74169921875 2 1376.73706 2751.45957 1.267 0.0017443 0.45418 0.00062529 1.7211 0.0023696 1377.23892182788 106.25 0.44826 106.25 106.07 106.52 0 41 8 7 0 0 0 5.4044E-57 2 128220 178.52 168.56 1 626060000 922 687 860 869 1069;1070 1069 AFLADPSAFVAAAPVAAATTAAPAAAAAPAK 31 Unmodified _AFLADPSAFVAAAPVAAATTAAPAAAAAPAK_ 0 0 0 P05388 P05388 P05388 RPLP0 60S acidic ribosomal protein P0 MULTI-MSMS 210214_Eclipse_Hela_QC 918.495239257812 3 918.160465 2751.45957 0.72746 0.00066793 0.50207 0.00046098 1.2295 0.0011289 918.494967377611 106.25 0.59748 106.25 105.97 106.57 0 32 11 5 0 0 0 7.1042E-70 1 128242 132.53 130.48 1 121170000 923 687 860 869 1071 1071 AFLDALQNQAEASSK 15 Unmodified _AFLDALQNQAEASSK_ 0 0 0 Q12931 Q12931 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 796.900207519531 2 796.899377 1591.7842 1.3555 0.0010802 -0.44409 -0.0003539 0.9114 0.00072629 796.899175368382 69.428 0.54784 69.428 69.228 69.776 0 35 10 5 0 0 0 7.3648E-56 2 77100 221.6 198.96 1 43203000 924 1924 861 870 1072;1073 1072 AFLDCCEYITQLR 13 Unmodified _AFLDCCEYITQLR_ 0 0 0 CON__Q2UVX4 CON__Q2UVX4 CON__Q2UVX4 MULTI-MSMS 210214_Eclipse_Hela_QC 845.395568847656 2 844.892183 1687.76981 0.78211 0.0006608 -0.17167 -0.00014504 0.61044 0.00051576 844.892182179029 84.276 0.84615 84.276 83.952 84.798 0 47 16 4 0 0 0 3.5946E-06 2 97743 135.86 128.95 1 56131000 + 925 92 862 871 1074;1075 1074 AFLDFHALPYQVVEVNPVR 19 Unmodified _AFLDFHALPYQVVEVNPVR_ 0 0 0 Q9H7Z7 Q9H7Z7 Q9H7Z7 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form MULTI-MSMS 210214_Eclipse_Hela_QC 739.06298828125 3 738.728384 2213.16332 1.4437 0.0010665 -1.0167 -0.00075104 0.42705 0.00031547 739.061634053221 105.05 0.54848 105.05 104.88 105.43 0 29 10 5 0 0 0 7.8793E-09 1 126601 106.16 92.925 1 37683000 926 3502 863 872 1076 1076 AFLDSLPDVK 10 Unmodified _AFLDSLPDVK_ 0 0 0 O15294 O15294 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit MULTI-MSMS 210214_Eclipse_Hela_QC 552.801147460938 2 552.800414 1103.58628 0.54643 0.00030207 0.19295 0.00010666 0.73938 0.00040873 552.800397687715 76.58 0.69646 76.58 76.129 76.826 0 29 13 3 0 0 0 0.016083 1 86927 48.283 37.214 1 7436700 927 259 864 873 1077 1077 AFLEDMK 7 Unmodified _AFLEDMK_ 0 0 0 Q9NXG2 Q9NXG2 Q9NXG2 THUMPD1 THUMP domain-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 427.209747314453 2 427.209847 852.40514 0.40268 0.00017203 -0.2658 -0.00011355 0.13688 5.8477E-05 427.209677802535 43.773 0.6468 43.773 43.494 44.141 0 25 12 3 0 0 0 0.029891 1 41255 55.441 7.2675 1 8043600 928 3728 865 874 1078 1078 AFLEENNLDYIIR 13 Unmodified _AFLEENNLDYIIR_ 0 0 0 P53041 P53041 P53041 PPP5C Serine/threonine-protein phosphatase 5 MULTI-MSMS 210214_Eclipse_Hela_QC 805.416137695312 2 805.414662 1608.81477 1.5604 0.0012567 1.2605 0.0010152 2.8208 0.002272 805.414841169122 92.618 0.84585 92.618 92.046 92.892 0 37 16 4 0 0 0 1.4117E-08 1 109252 145.89 125.58 1 23415000 929 1491 866 875 1079 1079 AFLFDVVSK 9 Unmodified _AFLFDVVSK_ 0 0 0 Q9HB90;Q9NQL2 Q9HB90 Q9HB90 RRAGC;RRAGD Ras-related GTP-binding protein C;Ras-related GTP-binding protein D MULTI-MSMS 210214_Eclipse_Hela_QC 513.286804199219 2 513.286943 1024.55933 -0.45003 -0.000231 0.26467 0.00013585 -0.18536 -9.5143E-05 513.287095829198 82.371 0.33543 82.371 82.147 82.482 0 9 6 2 0 0 0 0.017224 1 95259 50.04 25.042 1 3237200 930 3546 867 876 1080 1080 AFLGELK 7 Unmodified _AFLGELK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 210214_Eclipse_Hela_QC 389.229095458984 2 389.228897 776.44324 0.35709 0.00013899 -0.15337 -5.9695E-05 0.20373 7.9297E-05 389.228777557539 46.733 0.79572 46.733 46.329 47.125 0 27 15 2 0 0 0 0.0070007 1 44988 86.866 29.403 1 35510000 931 1752 868 877 1081 1081 AFLGQVLVR 9 Unmodified _AFLGQVLVR_ 0 0 0 P29372 P29372 P29372 MPG DNA-3-methyladenine glycosylase MULTI-MSMS 210214_Eclipse_Hela_QC 501.808990478516 2 501.808377 1001.6022 0.81401 0.00040847 -0.03892 -1.9531E-05 0.77509 0.00038894 501.808263063827 67.853 0.44717 67.853 67.66 68.107 0 14 8 2 0 0 0 0.035634 1 74980 41.652 16.73 1 1250200 932 1101 869 878 1082 1082 AFLIEEQK 8 Unmodified _AFLIEEQK_ 0 0 0 P49207 P49207 P49207 RPL34 60S ribosomal protein L34 MULTI-MSMS 210214_Eclipse_Hela_QC 489.268920898438 2 489.26875 976.522947 0.50993 0.00024949 -0.78487 -0.00038401 -0.27493 -0.00013452 489.268825038031 43.07 1.9414 43.07 42.298 44.24 0 102 38 5 0 0 0 0.00099242 2 39818 114.78 81.425 1 180720000 933 1361 870 879 1083;1084 1083 AFLLESLLK 9 Unmodified _AFLLESLLK_ 0 0 0 Q96JM3 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 517.319213867188 2 517.318243 1032.62193 1.3808 0.00071431 -0.47156 -0.00024395 0.90923 0.00047036 517.317958878463 101.38 0.54716 101.38 101.1 101.64 0 24 10 3 0 0 0 0.011351 1 121395 52.716 37.934 1 2233700 934 3080 871 880 1085 1085 AFLLTPR 7 Unmodified _AFLLTPR_ 0 0 0 O95445 O95445 O95445 APOM Apolipoprotein M MULTI-MSMS 210214_Eclipse_Hela_QC 409.250305175781 2 409.250163 816.485774 -0.017601 -7.2031E-06 1.1833 0.00048428 1.1657 0.00047707 409.250774259034 52.374 0.99588 52.374 51.946 52.942 0 40 19 3 0 0 0 0.0067719 1 52929 88.734 67.188 1 11809000 935 571 872 881 1086 1086 AFLNAIMR 8 Unmodified _AFLNAIMR_ 0 0 0 Q14839;Q8TDI0 Q14839 Q14839 CHD4;CHD5 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5 MULTI-MSMS 210214_Eclipse_Hela_QC 468.260833740234 2 468.260205 934.505857 1.1308 0.00052952 0.34502 0.00016156 1.4758 0.00069108 468.260407189059 65.642 1.0458 65.642 65.054 66.1 0 48 20 4 0 0 0 0.0023714 2 71887 103.29 75.179 1 6294400 936 2115 873 882 1087;1088 1088 AFLQGGQEATDIALLLR 17 Unmodified _AFLQGGQEATDIALLLR_ 0 0 0 Q14203 Q14203 Q14203 DCTN1 Dynactin subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 908.502319335938 2 908.5018 1814.98905 0.95055 0.00086358 -0.36103 -0.000328 0.58952 0.00053558 908.501411869739 106.15 0.24876 106.15 106.02 106.27 0 10 4 3 0 0 0 0.00010522 1 128186 78.692 71.327 1 19506000 937 2069 874 883 1089 1089 AFLSPPTLLEGPLR 14 Unmodified _AFLSPPTLLEGPLR_ 0 0 0 Q96PC5 Q96PC5 Q96PC5 MIA2 Melanoma inhibitory activity protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 756.439514160156 2 755.935034 1509.85551 1.4507 0.0010966 0.78076 0.0005902 2.2314 0.0016868 755.935501542035 101.88 0.49696 101.88 101.55 102.04 0 15 9 2 0 0 0 0.048998 1 122118 40.589 32.702 1 6346300 938 3110 875 884 1090 1090 AFLSTHPNTETVFEAFLK 18 Unmodified _AFLSTHPNTETVFEAFLK_ 0 0 0 Q96S44 Q96S44 Q96S44 TP53RK TP53-regulating kinase MULTI-MSMS 210214_Eclipse_Hela_QC 685.020935058594 3 684.686074 2051.03639 1.2203 0.00083553 -0.18621 -0.00012749 1.0341 0.00070803 685.020287433526 97.02 1.1942 97.02 96.521 97.716 0 47 23 3 0 0 0 0.03435 1 115581 24.041 19.332 1 4601100 939 3129 876 885 1091 1091 AFLTGVDPILGHQLSAR 17 Unmodified _AFLTGVDPILGHQLSAR_ 0 0 0 Q6P9B9 Q6P9B9 Q6P9B9 INTS5 Integrator complex subunit 5 MULTI-MSMS 210214_Eclipse_Hela_QC 599.001586914062 3 599.000216 1793.97882 1.4373 0.00086096 0.63494 0.00038033 2.0723 0.0012413 599.000406492624 81.434 0.59615 81.434 81.203 81.799 0 31 11 5 0 0 0 0.047414 1 93957 19.39 9.8201 1 2946600 940 2457 877 886 1092 1092 AFLTLAEDILR 11 Unmodified _AFLTLAEDILR_ 0 0 0 P61026 P61026 P61026 RAB10 Ras-related protein Rab-10 MULTI-MSMS 210214_Eclipse_Hela_QC 631.360778808594 2 631.36117 1260.70779 0.3898 0.0002461 -1.7394 -0.0010982 -1.3496 -0.0008521 631.358912245563 106.17 0.6973 106.17 105.87 106.57 0 24 13 4 0 0 0 8.0146E-12 1 127963 149.57 114.76 1 34961000 941 1597 878 887 1093 1093 AFMGPLK 7 Unmodified _AFMGPLK_ 0 0 0 P39023 P39023 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 210214_Eclipse_Hela_QC 382.211700439453 2 382.212192 762.409832 -0.29842 -0.00011406 0.2157 8.2443E-05 -0.082724 -3.1618E-05 382.212271376441 39.505 1.5296 39.505 39.131 40.661 0 74 31 4 0 0 0 0.017765 3 34649 66.994 49.106 1 114030000 942 1232 879 888 1094;1095;1096 1094 AFMTADLPNELIELLEK 17 Oxidation (M) _AFM(Oxidation (M))TADLPNELIELLEK_ AFM(1)TADLPNELIELLEK AFM(95)TADLPNELIELLEK 0 1 0 Q00610;P53675 Q00610;P53675 Q00610 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 MULTI-MSMS 210214_Eclipse_Hela_QC 982.51123046875 2 982.008267 1962.00198 0.88956 0.00087355 0.60091 0.0005901 1.4905 0.0014636 982.510601414084 109.73 0.29947 109.73 109.6 109.9 0 13 5 4 0 0 0 4.2652E-05 1 133049 95.417 66.118 1 11729000 943 1802;1503 880 889 1097 1097 361 AFMTADLPNELIELLEK 17 Unmodified _AFMTADLPNELIELLEK_ 0 0 0 Q00610;P53675 Q00610;P53675 Q00610 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 MULTI-MSMS 210214_Eclipse_Hela_QC 974.517028808594 2 974.010809 1946.00707 1.7088 0.0016644 -0.53714 -0.00052318 1.1716 0.0011412 974.010362172244 110.67 0.34872 110.67 110.55 110.9 0 23 6 6 0 0 0 2.143E-05 1 134324 112.44 106.29 1 27823000 944 1802;1503 880 890 1098 1098 AFNADFH 7 Unmodified _AFNADFH_ 0 0 0 P26440 P26440 P26440 IVD Isovaleryl-CoA dehydrogenase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 411.182586669922 2 411.182478 820.350402 -0.13189 -5.4229E-05 0.19605 8.0612E-05 0.064164 2.6383E-05 411.182500210691 35.066 0.59417 35.066 34.798 35.392 0 23 11 3 0 0 0 0.026512 1 28543 58.661 51.51 1 6412500 945 1059 881 891 1099 1099 AFNDPFIQK 9 Unmodified _AFNDPFIQK_ 0 0 0 Q92598 Q92598 Q92598 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 210214_Eclipse_Hela_QC 540.279357910156 2 540.279649 1078.54475 0.6564 0.00035464 0.43238 0.00023361 1.0888 0.00058825 540.279835920769 56.48 1.2436 56.48 56.168 57.412 0 49 24 4 0 0 0 0.00071805 1 58872 91.626 73.641 1 21321000 946 2889 882 892 1100 1100 AFNFGNGLQMLGQK 14 Unmodified _AFNFGNGLQMLGQK_ 0 0 0 O95573 O95573 O95573 ACSL3 Long-chain-fatty-acid--CoA ligase 3 MSMS 210214_Eclipse_Hela_QC 762.884521484375 2 762.885018 1523.75548 NaN NaN NaN NaN NaN NaN NaN 87.591 1 87.591 87.091 88.091 0 0 0 0 0.00031394 1 102407 79.986 54.327 1 947 581 883 893 1101 1101 AFNFLNEIK 9 Unmodified _AFNFLNEIK_ 0 0 0 P51809 P51809 P51809 VAMP7 Vesicle-associated membrane protein 7 MULTI-MSMS 210214_Eclipse_Hela_QC 548.295593261719 2 548.295299 1094.57605 0.38543 0.00021133 -0.20951 -0.00011487 0.17591 9.6452E-05 548.295267416421 80.389 0.84389 80.389 80.01 80.854 0 45 16 4 0 0 0 0.00035382 1 92354 106.36 87.574 1 10642000 948 1456 884 894 1102 1102 AFNSSSFNSNTFLTR 15 Unmodified _AFNSSSFNSNTFLTR_ 0 0 0 P46060 P46060 P46060 RANGAP1 Ran GTPase-activating protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 846.905578613281 2 846.902451 1691.79035 1.7282 0.0014636 0.75562 0.00063994 2.4838 0.0021035 846.903066889954 70.197 0.74593 70.197 69.875 70.621 0 45 14 5 0 0 0 2.3273E-16 2 78154 147.71 134.11 1 20483000 949 1301 885 895 1103;1104 1104 AFNSVDPTFDNSVPSK 16 Unmodified _AFNSVDPTFDNSVPSK_ 0 0 0 Q99543 Q99543 Q99543 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 862.910766601562 2 862.909941 1723.80533 0.24893 0.00021481 0.28611 0.00024689 0.53505 0.0004617 863.41187104337 61.987 0.69213 61.987 61.442 62.134 0 24 13 3 0 0 0 0.0082748 1 66609 37.995 37.995 1 5742700 950 3167 886 896 1105 1105 AFPAWADTSVLSR 13 Unmodified _AFPAWADTSVLSR_ 0 0 0 Q02252 Q02252 Q02252 ALDH6A1 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 710.863830566406 2 710.864608 1419.71466 1.2874 0.00091518 0.012581 8.9437E-06 1.3 0.00092412 710.865129338505 84.893 0.9453 84.893 84.351 85.296 0 46 18 3 0 0 0 0.0058395 1 98666 49.5 40.807 1 3506500 951 1827 887 897 1106 1106 AFPCWDEPAIK 11 Unmodified _AFPCWDEPAIK_ 0 0 0 P55786 P55786 P55786 NPEPPS Puromycin-sensitive aminopeptidase MULTI-MSMS 210214_Eclipse_Hela_QC 667.315979003906 2 667.315906 1332.61726 1.1308 0.00075461 -0.11083 -7.396E-05 1.02 0.00068065 667.315666878264 72.488 1.3448 72.488 72.115 73.459 0 61 26 3 0 0 0 0.015697 1 81277 46.001 40.444 1 16178000 952 1544 888 898 1107 1107 AFPDSPGLNR 10 Unmodified _AFPDSPGLNR_ 0 0 0 P35270 P35270 P35270 SPR Sepiapterin reductase MULTI-MSMS 210214_Eclipse_Hela_QC 537.272277832031 2 537.272355 1072.53016 0.56728 0.00030478 0.70004 0.00037611 1.2673 0.00068089 537.272857316143 41.614 1.2393 41.614 41.109 42.348 0 47 24 3 0 0 0 0.035494 1 37708 37.722 26.653 1 11142000 953 1187 889 899 1108 1108 AFPEHFTYEPNEADAAQGYR 20 Unmodified _AFPEHFTYEPNEADAAQGYR_ 0 0 0 P13807 P13807 P13807 GYS1 Glycogen [starch] synthase, muscle MULTI-MSMS 210214_Eclipse_Hela_QC 772.013488769531 3 771.678418 2312.01342 0.62402 0.00048154 0.45878 0.00035403 1.0828 0.00083557 772.012675980893 61.739 0.8413 61.739 61.293 62.134 0 58 16 5 0 0 0 0.00098647 1 66152 42.118 38.677 1 12856000 954 868 890 900 1109 1109 AFPLAEWQPSDVDQR 15 Unmodified _AFPLAEWQPSDVDQR_ 0 0 0 Q96S19 Q96S19 Q96S19 C16orf13 UPF0585 protein C16orf13 MULTI-MSMS 210214_Eclipse_Hela_QC 880.425354003906 2 879.925926 1757.8373 1.2002 0.0010561 -1.6255 -0.0014303 -0.42526 -0.0003742 880.425601926298 85.197 0.94467 85.197 84.599 85.544 0 40 18 4 0 0 0 0.051519 1 99149 30.55 21.228 1 2579300 955 3128 891 901 1110 1110 AFPMPGFDEH 10 Unmodified _AFPMPGFDEH_ 0 0 0 P34897 P34897 P34897 SHMT2 Serine hydroxymethyltransferase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 574.248168945312 2 574.247492 1146.48043 0.20346 0.00011684 0.06137 3.5241E-05 0.26483 0.00015208 574.247599684912 74.924 1.296 74.924 74.405 75.701 0 87 25 6 0 0 0 0.00032267 2 84465 94.262 93.002 1 82714000 956 1172 892 902 1111;1112 1111 AFPMPGFDEH 10 Unmodified _AFPMPGFDEH_ 0 0 0 P34897 P34897 P34897 SHMT2 Serine hydroxymethyltransferase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1147.57556152344 1 1147.48771 1146.48043 0.44603 0.00051182 1.736 0.001992 2.182 0.0025038 1148.4930807981 74.928 0.24887 74.928 74.704 74.953 0 6 4 2 0 0 0 0.040603 1 84658 79.116 60.676 1 677080 957 1172 892 902 1113 1113 AFPQLGGRPGPEGEGSLESQPPPLQTQACPESSCLR 36 Unmodified _AFPQLGGRPGPEGEGSLESQPPPLQTQACPESSCLR_ 0 0 1 O94992 O94992 O94992 HEXIM1 Protein HEXIM1 MULTI-MSMS 210214_Eclipse_Hela_QC 1279.61328125 3 1278.94398 3833.81012 1.9961 0.002553 -0.33165 -0.00042417 1.6645 0.0021288 1279.61215319723 76.017 0.72644 76.017 75.701 76.427 0 59 14 7 0 0 0 7.0162E-05 2 86325 40.952 37.747 1 12184000 958 530 893 903 1114;1115 1115 AFPYGNVAFPHLPGSAPSWPSLVDTSK 27 Unmodified _AFPYGNVAFPHLPGSAPSWPSLVDTSK_ 0 0 0 Q6UN15 Q6UN15 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 MULTI-MSMS 210214_Eclipse_Hela_QC 948.479858398438 3 948.144815 2841.41262 0.91048 0.00086327 -0.31365 -0.00029739 0.59683 0.00056588 948.478984288559 105.49 0.24931 105.49 105.33 105.58 0 20 4 6 0 0 0 1.0516E-05 1 127198 66.282 59.777 1 41820000 959 2474 894 904 1116 1116 AFQAAFR 7 Unmodified _AFQAAFR_ 0 0 0 Q15021 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 405.716766357422 2 405.716488 809.418422 -0.23857 -9.679E-05 0.040514 1.6437E-05 -0.19805 -8.0353E-05 405.716529596768 32.62 0.81973 32.62 32.361 33.181 0 22 16 2 0 0 0 0.057276 1 25134 45.75 18.433 1 5254900 960 2134 895 905 1117 1117 AFQNTATACAPVSHYR 16 Unmodified _AFQNTATACAPVSHYR_ 0 0 0 Q9H814 Q9H814 Q9H814 PHAX Phosphorylated adapter RNA export protein MULTI-MSMS 210214_Eclipse_Hela_QC 599.286926269531 3 598.617777 1792.8315 0.56279 0.0003369 0.22178 0.00013276 0.78458 0.00046966 599.28649792407 31.02 0.74706 31.02 30.723 31.47 0 44 14 5 0 0 0 0.00082598 2 22925 49.049 47.731 1 13525000 961 3503 896 906 1118;1119 1118 AFQNVFAPR 9 Unmodified _AFQNVFAPR_ 0 0 0 P15586 P15586 P15586 GNS N-acetylglucosamine-6-sulfatase MULTI-MSMS 210214_Eclipse_Hela_QC 525.279846191406 2 525.279983 1048.54541 0.47145 0.00024764 -3.6177 -0.0019003 -3.1463 -0.0016527 525.279246849672 52.983 1.4448 52.983 52.096 53.541 0 50 28 3 0 0 0 0.0013919 1 53920 82.305 41.732 1 9946000 962 904 897 907 1120 1120 AFQQSVEQDNLFDISTEEGSTK 22 Unmodified _AFQQSVEQDNLFDISTEEGSTK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 1237.07531738281 2 1237.0719 2472.12924 1.9436 0.0024043 0.3029 0.00037471 2.2465 0.002779 1237.57368158506 83.804 0.54752 83.804 83.504 84.052 0 34 10 4 0 0 0 5.4056E-06 1 97036 94.728 90.259 1 8836500 963 2102 898 908 1121 1121 AFQYADGLEQLR 12 Unmodified _AFQYADGLEQLR_ 0 0 0 Q9BU89 Q9BU89 Q9BU89 DOHH Deoxyhypusine hydroxylase MULTI-MSMS 210214_Eclipse_Hela_QC 706.358215332031 2 705.854241 1409.69393 1.4154 0.00099904 -0.50489 -0.00035638 0.91048 0.00064266 705.854048615674 70.699 0.54669 70.699 70.472 71.019 0 30 10 4 0 0 0 0.0078859 1 78867 49.3 30.197 1 6209700 964 3284 899 909 1122 1122 AFQYVETHGEVCPANWTPDSPTIK 24 Unmodified _AFQYVETHGEVCPANWTPDSPTIK_ 0 0 0 P30048 P30048 P30048 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 916.096008300781 3 916.430515 2746.26972 1.3074 0.0011981 -0.22462 -0.00020585 1.0827 0.00099226 916.764663741779 74.1 1.3952 74.1 73.758 75.153 0 138 27 8 0 0 0 2.8995E-18 3 83824 128.98 122.25 1 217090000 965 1114 900 910 1123;1124;1125 1124 AFQYVETHGEVCPANWTPDSPTIK 24 Unmodified _AFQYVETHGEVCPANWTPDSPTIK_ 0 0 0 P30048 P30048 P30048 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1374.64440917969 2 1374.14213 2746.26972 1.7558 0.0024127 0.04054 5.5708E-05 1.7963 0.0024684 1374.64355948301 74.082 0.44819 74.082 73.907 74.355 0 27 8 4 0 0 0 1.6316E-09 1 83747 118.47 114.3 1 2979300 966 1114 900 910 1126 1126 AFREEFGAEPELAVSAPGR 19 Unmodified _AFREEFGAEPELAVSAPGR_ 0 0 1 P51570 P51570 P51570 GALK1 Galactokinase MULTI-MSMS 210214_Eclipse_Hela_QC 678.339721679688 3 678.341078 2032.0014 0.5487 0.0003722 -0.83073 -0.00056352 -0.28204 -0.00019132 678.339612749409 66.174 0.54762 66.174 65.901 66.448 0 24 10 3 0 0 0 0.0044941 1 72563 38.377 23.905 1 5852100 967 1443 901 911 1127 1127 AFSDPFVEAEK 11 Unmodified _AFSDPFVEAEK_ 0 0 0 P34932 P34932 P34932 HSPA4 Heat shock 70 kDa protein 4 MSMS 210214_Eclipse_Hela_QC 620.29833984375 2 620.298236 1238.58192 NaN NaN NaN NaN NaN NaN NaN 62.975 1 62.975 62.475 63.475 0 0 0 0 0.0043217 1 68097 73.067 52.165 1 968 1173 902 912 1128 1128 AFSGYLGTDQSK 12 Unmodified _AFSGYLGTDQSK_ 0 0 0 P10768 P10768 P10768 ESD S-formylglutathione hydrolase MULTI-MSMS 210214_Eclipse_Hela_QC 637.810302734375 2 637.306592 1272.59863 0.59557 0.00037956 0.24088 0.00015352 0.83645 0.00053308 637.306707608813 41.978 0.94144 41.978 41.606 42.547 0 49 18 4 0 0 0 0.0021141 1 38169 57.149 52.733 1 45652000 969 812 903 913 1129 1129 AFSITQGLLK 10 Unmodified _AFSITQGLLK_ 0 0 0 O15067 O15067 O15067 PFAS Phosphoribosylformylglycinamidine synthase MULTI-MSMS 210214_Eclipse_Hela_QC 539.319213867188 2 539.318774 1076.623 0.68793 0.00037101 -0.026437 -1.4258E-05 0.66149 0.00035676 539.318722548236 73.717 0.64706 73.717 73.459 74.106 0 41 12 4 0 0 0 0.0035798 1 83043 63.419 47.275 1 17732000 970 235 904 914 1130 1130 AFSPTTVNTGR 11 Unmodified _AFSPTTVNTGR_ 0 0 0 P61619 P61619 P61619 SEC61A1 Protein transport protein Sec61 subunit alpha isoform 1 MULTI-SECPEP 210214_Eclipse_Hela_QC 575.255615234375 2 575.796195 1149.57784 0.85407 0.00049177 0.0084066 4.8405E-06 0.86248 0.00049661 575.796067710126 30.558 0.64823 30.558 30.325 30.973 0 19 12 2 0 0 0 0.0029688 1 22255 103.19 64.774 1 29592000 971 1621 905 915 1131 1131 AFSQFGK 7 Unmodified _AFSQFGK_ 0 0 0 O60506 O60506 O60506 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q MSMS 210214_Eclipse_Hela_QC 392.702941894531 2 392.703046 783.391539 NaN NaN NaN NaN NaN NaN NaN 26.146 1 26.146 25.646 26.646 0 0 0 0 0.0011169 1 15897 111.69 64.642 1 972 373 906 916 1132 1132 AFSSPQEEEEAGFTGR 16 Unmodified _AFSSPQEEEEAGFTGR_ 0 0 0 Q14241 Q14241 Q14241 TCEB3 Transcription elongation factor B polypeptide 3 MULTI-MSMS 210214_Eclipse_Hela_QC 871.889282226562 2 871.38683 1740.75911 1.1687 0.0010184 -0.064696 -5.6375E-05 1.104 0.00096198 871.386651733808 49.592 0.49424 49.592 49.337 49.831 0 23 9 3 0 0 0 6.0373E-09 1 49202 117.79 107.79 1 6503300 973 2073 907 917 1133 1133 AFSVFLFNTENK 12 Unmodified _AFSVFLFNTENK_ 0 0 0 Q13907 Q13907 Q13907 IDI1 Isopentenyl-diphosphate Delta-isomerase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 709.365478515625 2 708.861534 1415.70852 1.4379 0.0010193 1.1589 0.00082148 2.5968 0.0018408 708.861843116001 92.018 1.3431 92.018 91.499 92.842 0 55 26 4 0 0 0 0.00034736 1 108376 76.465 71.524 1 7047700 974 2041 908 918 1134 1134 AFSVNIFK 8 Unmodified _AFSVNIFK_ 0 0 0 P11279 P11279 P11279 LAMP1 Lysosome-associated membrane glycoprotein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 463.260803222656 2 463.260728 924.506903 0.51585 0.00023897 0.21205 9.8232E-05 0.72789 0.0003372 463.260739323732 70.435 0.94514 70.435 70.024 70.969 0 41 18 3 0 0 0 0.0075043 1 78440 72.138 40.835 1 11156000 975 829 909 919 1135 1135 AFSYYGPLR 9 Unmodified _AFSYYGPLR_ 0 0 0 Q16629 Q16629 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 MULTI-MSMS 210214_Eclipse_Hela_QC 537.275939941406 2 537.274367 1072.53418 0.8331 0.0004476 0.11834 6.3583E-05 0.95145 0.00051119 537.274424618133 58.264 0.89613 58.264 57.91 58.806 0 44 17 3 0 0 0 0.00044562 2 61243 102.72 82.094 1 66266000 976 2239 910 920 1136;1137 1136 AFTALCYSADGHSILAGGMSK 21 Unmodified _AFTALCYSADGHSILAGGMSK_ 0 0 0 Q15269 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 720.012634277344 3 719.674963 2156.00306 1.5643 0.0011258 0.7491 0.00053911 2.3134 0.0016649 720.010018421555 74.332 0.59777 74.332 74.106 74.704 0 34 11 5 0 0 0 6.6315E-06 1 83991 54.668 49.766 1 8831500 977 2167 911 921 1138 1138 AFTDNAVAFDTGFCHVER 18 Unmodified _AFTDNAVAFDTGFCHVER_ 0 0 0 Q92889 Q92889 Q92889 ERCC4 DNA repair endonuclease XPF MULTI-MSMS 210214_Eclipse_Hela_QC 686.644958496094 3 686.310901 2055.91087 0.90334 0.00061997 0.40858 0.00028041 1.3119 0.00090038 686.645568771539 71.493 0.69707 71.493 71.268 71.965 0 17 13 2 0 0 0 0.054726 1 79946 16.487 12.768 1 4012000 978 2917 912 922 1139 1139 AFTELQAK 8 Unmodified _AFTELQAK_ 0 0 0 O60925 O60925 O60925 PFDN1 Prefoldin subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 454.24755859375 2 454.247818 906.481082 0.19835 9.0099E-05 -0.00081611 -3.7072E-07 0.19753 8.9728E-05 454.247795687979 29.305 1.1935 29.305 29.032 30.225 0 41 23 2 0 0 0 0.0033142 1 20305 89.369 52.275 1 18384000 979 410 913 923 1140 1140 AFTFDDEDDELSQLK 15 Unmodified _AFTFDDEDDELSQLK_ 0 0 0 Q9H9C1 Q9H9C1 Q9H9C1 VIPAS39 Spermatogenesis-defective protein 39 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 887.401123046875 2 886.896696 1771.77884 1.8414 0.0016331 0.3086 0.0002737 2.15 0.0019068 887.397958630211 85.878 0.49723 85.878 85.693 86.19 0 19 9 3 0 0 0 0.00023457 1 100069 69.01 63.038 1 2835000 980 3523 914 924 1141 1141 AFTHTAQYDEAISDYFR 17 Unmodified _AFTHTAQYDEAISDYFR_ 0 0 0 P31939 P31939 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase MULTI-MSMS 210214_Eclipse_Hela_QC 679.313354492188 3 678.977916 2033.91192 0.726 0.00049294 -0.011857 -8.0504E-06 0.71414 0.00048489 679.31225142861 73.928 1.1952 73.928 73.559 74.754 0 83 23 5 0 0 0 1.3305E-25 2 83192 151.8 151.8 1 60376000 981 1148 915 925 1142;1143 1142 AFTKPEEACSFILSADFPALVVK 23 Unmodified _AFTKPEEACSFILSADFPALVVK_ 0 0 1 P22102 P22102 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 210214_Eclipse_Hela_QC 847.777099609375 3 847.441692 2539.30325 0.97536 0.00082656 -0.3005 -0.00025465 0.67486 0.00057191 847.776122173069 105.5 0.44867 105.5 105.38 105.82 0 32 8 6 0 0 0 2.5775E-13 1 127206 116.45 109.12 1 134450000 982 1006 916 926 1144 1144 AFTSWTANTGIEACR 15 Unmodified _AFTSWTANTGIEACR_ 0 0 0 Q15067 Q15067 Q15067 ACOX1 Peroxisomal acyl-coenzyme A oxidase 1 MSMS 210214_Eclipse_Hela_QC 842.891540527344 2 842.891029 1683.7675 NaN NaN NaN NaN NaN NaN NaN 65.09 1 65.09 64.59 65.59 0 0 0 0 1.6131E-10 1 71066 119.76 97.771 1 983 2150 917 927 1145 1145 AFTTTLNLLPYHK 13 Unmodified _AFTTTLNLLPYHK_ 0 0 0 O43847 O43847 O43847 NRD1 Nardilysin MULTI-MSMS 210214_Eclipse_Hela_QC 506.949432373047 3 506.948681 1517.82421 0.68407 0.00034679 0.19335 9.8019E-05 0.87742 0.00044481 506.948838327117 73.484 0.54805 73.484 73.21 73.758 0 18 10 2 0 0 0 0.038285 1 82735 27.409 22.13 1 3546000 984 346 918 928 1146 1146 AFTYINLDK 9 Unmodified _AFTYINLDK_ 0 0 0 P02786 P02786 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form MULTI-MSMS 210214_Eclipse_Hela_QC 542.787536621094 2 542.787307 1083.56006 0.43792 0.0002377 0.25234 0.00013697 0.69026 0.00037466 542.787448730123 61.317 1.6326 61.317 60.896 62.528 0 85 32 4 0 0 0 0.0007256 1 65520 91.318 75.82 1 169160000 985 645 919 929 1147 1147 AFVAIGDYNGHVGLGVK 17 Unmodified _AFVAIGDYNGHVGLGVK_ 0 0 0 P15880 P15880 P15880 RPS2 40S ribosomal protein S2 MULTI-MSMS 210214_Eclipse_Hela_QC 572.974365234375 3 572.973778 1715.8995 0.46264 0.00026508 0.16707 9.5728E-05 0.62971 0.00036081 572.973881375098 68.777 1.7176 68.777 68.356 70.074 0 123 34 5 0 0 0 7.0942E-08 2 75911 103.79 98.736 1 97771000 986 905 920 930 1148;1149 1148 AFVAIGDYNGHVGLGVK 17 Unmodified _AFVAIGDYNGHVGLGVK_ 0 0 0 P15880 P15880 P15880 RPS2 40S ribosomal protein S2 MULTI-MSMS 210214_Eclipse_Hela_QC 858.958679199219 2 858.957029 1715.8995 0.84257 0.00072373 0.37164 0.00031922 1.2142 0.001043 858.956968921037 68.747 1.2702 68.747 68.356 69.626 0 54 25 3 0 0 0 0.00014503 1 76003 92.866 83.862 1 12157000 987 905 920 930 1150 1150 AFVDFLSDEIK 11 Unmodified _AFVDFLSDEIK_ 0 0 0 Q07021 Q07021 Q07021 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 642.33056640625 2 642.329536 1282.64452 1.0634 0.00068308 -0.39487 -0.00025364 0.66858 0.00042945 642.329423379981 96.844 1.988 96.844 96.174 98.162 0 134 39 6 0 0 0 1.4203E-07 2 114896 126.07 121.28 1 305750000 988 1872 921 931 1151;1152 1151 AFVDFLSDEIK 11 Unmodified _AFVDFLSDEIK_ 0 0 0 Q07021 Q07021 Q07021 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1284.09460449219 1 1283.6518 1282.64452 2.1645 0.0027785 -0.096737 -0.00012418 2.0678 0.0026543 1283.65141803081 96.845 0.44781 96.845 96.571 97.019 0 14 8 2 0 0 0 5.9357E-06 1 115364 125.56 93.243 1 1853600 989 1872 921 931 1153 1153 AFVDVVNGEYVPR 13 Unmodified _AFVDVVNGEYVPR_ 0 0 0 O94763 O94763 O94763 URI1 Unconventional prefoldin RPB5 interactor 1 MULTI-MSMS 210214_Eclipse_Hela_QC 732.87890625 2 732.877716 1463.74088 0.82583 0.00060524 0.90378 0.00066236 1.7296 0.0012676 733.379801497034 75.285 0.44817 75.285 75.153 75.601 0 13 8 2 0 0 0 0.001771 1 85480 53.683 32.813 1 2626300 990 512 922 932 1154 1154 AFVENYPQFK 10 Unmodified _AFVENYPQFK_ 0 0 0 Q9NRW7 Q9NRW7 Q9NRW7 VPS45 Vacuolar protein sorting-associated protein 45 MULTI-MSMS 210214_Eclipse_Hela_QC 621.811340332031 2 621.811313 1241.60807 0.7901 0.0004913 0.02162 1.3443E-05 0.81172 0.00050474 621.811094606701 58.177 0.74699 58.177 57.611 58.358 0 22 14 3 0 0 0 0.0025094 1 61388 67.169 62.386 1 4141400 991 3631 923 933 1155 1155 AFVHWYVGEGMEEGEFSEAR 20 Oxidation (M) _AFVHWYVGEGM(Oxidation (M))EEGEFSEAR_ AFVHWYVGEGM(1)EEGEFSEAR AFVHWYVGEGM(79)EEGEFSEAR 0 1 0 P68363;P68366;Q9BQE3;Q9NY65 P68363;P68366;Q9BQE3;Q9NY65 P68363 TUBA1B;TUBA4A;TUBA1C;TUBA8 Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1C chain;Tubulin alpha-8 chain MULTI-MSMS 210214_Eclipse_Hela_QC 783.011291503906 3 782.675909 2345.0059 1.182 0.00092516 -0.032753 -2.5635E-05 1.1493 0.00089952 783.010434707766 71.401 1.0956 71.401 71.118 72.214 0 67 21 5 0 0 0 5.8346E-06 1 79729 79.311 75.578 1 14541000 992 1730;1731;3226;3738 924 934 1156 1156 453 AFVHWYVGEGMEEGEFSEAR 20 Unmodified _AFVHWYVGEGMEEGEFSEAR_ 0 0 0 P68363;P68366;Q9BQE3;Q9NY65 P68363;P68366;Q9BQE3;Q9NY65 P68363 TUBA1B;TUBA4A;TUBA1C;TUBA8 Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1C chain;Tubulin alpha-8 chain MULTI-MSMS 210214_Eclipse_Hela_QC 777.680236816406 3 777.34427 2329.01098 1.3009 0.0010113 -0.085341 -6.6339E-05 1.2156 0.00094493 777.678514350082 80.63 2.1859 80.63 80.21 82.395 0 184 43 8 0 0 0 9.8857E-10 6 93305 108.49 105.61 1 95649000 993 1730;1731;3226;3738 924 935 1157;1158;1159;1160;1161;1162 1159 AFVPAILFK 9 Unmodified _AFVPAILFK_ 0 0 0 Q9HAU5 Q9HAU5 Q9HAU5 UPF2 Regulator of nonsense transcripts 2 MULTI-MSMS 210214_Eclipse_Hela_QC 503.310913085938 2 503.310221 1004.60589 0.7343 0.00036958 0.3492 0.00017576 1.0835 0.00054534 503.310326962705 90.671 0.49738 90.671 90.455 90.952 0 22 9 3 0 0 0 0.026711 1 106663 45.718 30.936 1 2286700 994 3537 925 936 1163 1163 AFVPPLAEDLLAR 13 Unmodified _AFVPPLAEDLLAR_ 0 0 0 Q96P48 Q96P48 Q96P48 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 706.904663085938 2 706.400827 1410.7871 1.5185 0.0010726 -0.14545 -0.00010275 1.373 0.00096989 706.400500514858 105.03 0.34956 105.03 104.83 105.18 0 19 6 4 0 0 0 0.00047403 1 126550 67.726 60.597 1 7203900 995 3108 926 937 1164 1164 AFVRPSGTEDVVR 13 Unmodified _AFVRPSGTEDVVR_ 0 0 1 O95394 O95394 O95394 PGM3 Phosphoacetylglucosamine mutase MULTI-MSMS 210214_Eclipse_Hela_QC 478.590972900391 3 478.256285 1431.74703 0.1433 6.8533E-05 -0.48261 -0.00023081 -0.33931 -0.00016228 478.255847362846 32.427 0.86586 32.427 32.066 32.932 0 36 17 3 0 0 0 0.00011703 1 24728 77.912 50.05 1 18342000 996 567 927 938 1165 1165 AFVSGLLIGQCSSQK 15 Unmodified _AFVSGLLIGQCSSQK_ 0 0 0 Q5SWX8 Q5SWX8 Q5SWX8 ODR4 Protein odr-4 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 798.417419433594 2 797.916515 1593.81848 1.3712 0.0010941 -0.45488 -0.00036296 0.91636 0.00073118 798.417314240372 72.389 0.54729 72.389 72.115 72.662 0 17 10 2 0 0 0 0.0056805 1 81185 55.426 34.556 1 2600100 997 2346 928 939 1166 1166 AFVSMVYSEEGAEDR 15 Unmodified _AFVSMVYSEEGAEDR_ 0 0 0 Q14683 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 845.376159667969 2 845.374877 1688.7352 1.1341 0.00095875 0.14793 0.00012505 1.282 0.0010838 845.87689484997 65.178 0.69736 65.178 64.905 65.602 0 32 13 3 0 0 0 1.4019E-07 1 71140 137.17 124.59 1 12636000 998 2100 929 940 1167 1167 AFVTDWDK 8 Unmodified _AFVTDWDK_ 0 0 0 Q9NVI7 Q9NVI7 Q9NVI7 ATAD3A ATPase family AAA domain-containing protein 3A MULTI-MSMS 210214_Eclipse_Hela_QC 491.237670898438 2 491.23745 980.460347 0.64019 0.00031448 -0.032433 -1.5932E-05 0.60775 0.00029855 491.237374855674 52.645 0.7973 52.645 52.344 53.142 0 31 15 4 0 0 0 0.038907 1 53496 45.972 32.935 1 6995700 999 3682 930 941 1168 1168 AFYECLAACEGSR 13 Unmodified _AFYECLAACEGSR_ 0 0 0 O75718 O75718 O75718 CRTAP Cartilage-associated protein MULTI-MSMS 210214_Eclipse_Hela_QC 767.32763671875 2 767.326676 1532.6388 0.79928 0.00061331 -0.033654 -2.5824E-05 0.76563 0.00058749 767.326659206098 56.442 0.59721 56.442 56.118 56.716 0 26 11 3 0 0 0 0.00011346 1 58779 88.596 86.442 1 15085000 1000 480 931 942 1169 1169 AFYGDTLVTGFAR 13 Unmodified _AFYGDTLVTGFAR_ 0 0 0 Q9HCC0 Q9HCC0 Q9HCC0 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 709.861694335938 2 709.359159 1416.70376 1.97 0.0013974 -0.41926 -0.00029741 1.5507 0.0011 709.35888474329 83.349 0.54737 83.349 83.106 83.653 0 25 10 3 0 0 0 0.00078358 1 96471 64.374 42.137 1 5376200 1001 3556 932 943 1170 1170 AFYMEEGVPYCER 13 Unmodified _AFYMEEGVPYCER_ 0 0 0 Q9NR12 Q9NR12 Q9NR12 PDLIM7 PDZ and LIM domain protein 7 MULTI-MSMS 210214_Eclipse_Hela_QC 826.351318359375 2 825.849984 1649.68541 0.60209 0.00049724 -0.24441 -0.00020185 0.35768 0.00029539 825.849846907636 67.03 0.48185 67.03 66.747 67.229 0 24 9 3 0 0 0 0.00026833 1 73657 84.17 81.758 1 8398200 1002 3609 933 944 1171 1171 AFYNNVLGEYEEYITK 16 Unmodified _AFYNNVLGEYEEYITK_ 0 0 0 P04181 P04181 P04181 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form MULTI-MSMS 210214_Eclipse_Hela_QC 977.470397949219 2 976.967456 1951.92036 1.074 0.0010492 0.34651 0.00033853 1.4205 0.0013878 977.469135588757 104.35 0.59663 104.35 104.03 104.63 0 36 11 4 0 0 0 0.0024166 1 125628 49.934 46.896 1 10095000 1003 662 934 945 1172 1172 AFYPEEISSMVLTK 14 Oxidation (M) _AFYPEEISSM(Oxidation (M))VLTK_ AFYPEEISSM(1)VLTK AFYPEEISSM(42)VLTK 0 1 0 P0DMV9;P0DMV8 P0DMV9 P0DMV9 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 815.907165527344 2 815.905282 1629.79601 1.1028 0.00089977 0.91673 0.00074796 2.0195 0.0016477 815.905894617228 79.684 0.74657 79.684 79.314 80.06 0 31 14 3 0 0 0 0.025432 1 91388 42.425 31.205 1 9154200 1004 792 935 946 1173 1173 173 AFYPEEISSMVLTK 14 Oxidation (M) _AFYPEEISSM(Oxidation (M))VLTK_ AFYPEEISSM(1)VLTK AFYPEEISSM(59)VLTK 0 1 0 P0DMV9;P0DMV8 P0DMV9 P0DMV9 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 816.406860351562 2 815.905282 1629.79601 0.75512 0.0006161 1.2262 0.0010004 1.9813 0.0016165 815.905627556884 80.515 0.74411 80.515 80.16 80.904 0 34 14 4 0 0 0 0.0022454 1 92547 59.198 52.757 1 10841000 1005 792 935 946 1174 1174 173 AFYPEEISSMVLTK 14 Oxidation (M) _AFYPEEISSM(Oxidation (M))VLTK_ AFYPEEISSM(1)VLTK AFYPEEISSM(42)VLTK 0 1 0 P0DMV9;P0DMV8 P0DMV9 P0DMV9 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 815.904541015625 2 815.905282 1629.79601 1.4497 0.0011828 -0.40247 -0.00032838 1.0473 0.00085446 815.904974614515 95.198 0.74535 95.198 94.875 95.621 0 52 14 5 0 0 0 0.025432 1 113027 42.425 33.471 1 14966000 1006 792 935 946 1175 1175 173 AFYPEEISSMVLTK 14 Unmodified _AFYPEEISSMVLTK_ 0 0 0 P0DMV9;P0DMV8 P0DMV9 P0DMV9 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 807.907775878906 2 807.907824 1613.8011 1.3566 0.001096 -0.70275 -0.00056776 0.65386 0.00052826 807.907409829848 95.198 1.7412 95.198 94.483 96.224 0 117 35 6 0 0 0 0.00052973 3 112594 72.652 61.57 1 348040000 1007 792 935 947 1176;1177;1178 1176 AGAAPYVQAFDSLLAGPVAEYLK 23 Unmodified _AGAAPYVQAFDSLLAGPVAEYLK_ 0 0 0 Q01518 Q01518 Q01518 CAP1 Adenylyl cyclase-associated protein 1 MSMS 210214_Eclipse_Hela_QC 1176.11877441406 2 1176.11773 2350.2209 NaN NaN NaN NaN NaN NaN NaN 110.04 1 110.04 109.54 110.54 0 0 0 0 2.9988E-10 1 133455 112.24 98.556 1 1008 1816 936 948 1179 1179 AGAFDAVPCYHWSVGGK 17 Unmodified _AGAFDAVPCYHWSVGGK_ 0 0 0 Q6UB35 Q6UB35 Q6UB35 MTHFD1L Monofunctional C1-tetrahydrofolate synthase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 608.285583496094 3 607.950756 1820.83044 1.1286 0.00068615 1.7243 0.0010483 2.8529 0.0017344 608.286080590318 70.099 0.89472 70.099 69.726 70.621 0 41 17 3 0 0 0 0.0023422 1 78014 36.593 25.959 1 7172200 1009 2473 937 949 1180 1180 AGAFDQLK 8 Unmodified _AGAFDQLK_ 0 0 0 P61011 P61011 P61011 SRP54 Signal recognition particle 54 kDa protein MULTI-MSMS 210214_Eclipse_Hela_QC 425.226623535156 2 425.226885 848.439217 0.045596 1.9389E-05 0.75864 0.00032259 0.80423 0.00034198 425.2272636063 32.382 0.54626 32.382 32.114 32.66 0 19 10 3 0 0 0 0.014101 1 24836 60.895 31.997 1 4913200 1010 1593 938 950 1181 1181 AGAFEHLPSLR 11 Unmodified _AGAFEHLPSLR_ 0 0 0 Q13641 Q13641 Q13641 TPBG Trophoblast glycoprotein MULTI-MSMS 210214_Eclipse_Hela_QC 399.884094238281 3 399.884012 1196.63021 0.29408 0.0001176 0.12277 4.9093E-05 0.41685 0.00016669 399.884055478475 49.756 0.5442 49.756 49.486 50.03 0 16 10 2 0 0 0 0.041133 1 49421 22.232 15.563 1 3064500 1011 2027 939 951 1182 1182 AGAGDFMR 8 Unmodified _AGAGDFMR_ 0 0 0 Q96AY3 Q96AY3 Q96AY3 FKBP10 Peptidyl-prolyl cis-trans isomerase FKBP10 MULTI-MSMS 210214_Eclipse_Hela_QC 412.68994140625 2 412.689613 823.364672 -0.2285 -9.43E-05 0.31699 0.00013082 0.088492 3.652E-05 412.689560324804 29.118 0.78424 29.118 28.794 29.579 0 32 15 4 0 0 0 0.026495 1 20020 50.703 29.157 1 10813000 1012 2965 940 952 1183 1183 AGAGGGNDIQWCFSQVK 17 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AGAGGGNDIQWCFSQVK_ 1 0 0 P63151 P63151 P63151 PPP2R2A Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform MULTI-MSMS 210214_Eclipse_Hela_QC 919.423217773438 2 918.920317 1835.82608 1.4721 0.0013528 1.2821 0.0011782 2.7542 0.0025309 919.422962159057 92.061 0.84566 92.061 91.549 92.395 0 44 16 4 0 0 0 2.3545E-05 1 108633 84.821 75.866 1 11281000 1013 1709 941 953 1184 1184 AGAGSATLSMAYAGAR 16 Unmodified _AGAGSATLSMAYAGAR_ 0 0 0 P40926 P40926 P40926 MDH2 Malate dehydrogenase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 727.857360839844 2 727.856457 1453.69836 1.4135 0.0010288 -0.2739 -0.00019936 1.1396 0.00082949 727.856319555883 50.306 1.1928 50.306 49.683 50.876 0 59 23 5 0 0 0 2.7647E-11 1 50079 158.41 146.19 1 45002000 1014 1248 942 954 1185 1185 AGAIAPCEVTVPAQNTGLGPEK 22 Unmodified _AGAIAPCEVTVPAQNTGLGPEK_ 0 0 0 P05388;Q8NHW5 P05388 P05388 RPLP0;RPLP0P6 60S acidic ribosomal protein P0;60S acidic ribosomal protein P0-like MULTI-MSMS 210214_Eclipse_Hela_QC 1090.55737304688 2 1090.55444 2179.09432 0.28441 0.00031017 -0.35707 -0.00038941 -0.072661 -7.9241E-05 1091.05559070138 66.075 1.0948 66.075 65.751 66.846 0 99 21 7 0 0 0 8.4429E-08 1 72199 127.71 122.73 1 223850000 1015 687 943 955 1186 1186 AGAISASGPELQGAGHSK 18 Unmodified _AGAISASGPELQGAGHSK_ 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 210214_Eclipse_Hela_QC 546.612121582031 3 546.612909 1636.8169 0.3205 0.00017519 0.14182 7.7518E-05 0.46232 0.00025271 546.612875973193 25.487 0.49779 25.487 25.313 25.811 0 29 9 5 0 0 0 9.7511E-06 1 14944 69.737 62.846 1 31146000 1016 1896 944 956 1187 1187 AGAISASGPELQGAGHSK 18 Unmodified _AGAISASGPELQGAGHSK_ 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 210214_Eclipse_Hela_QC 819.416687011719 2 819.415725 1636.8169 0.72598 0.00059488 0.9068 0.00074305 1.6328 0.0013379 819.416721642578 25.487 0.34853 25.487 25.313 25.661 0 19 6 4 0 0 0 5.4375E-05 1 15054 80.469 68.306 1 16418000 1017 1896 944 956 1188 1188 AGALCLSR 8 Unmodified _AGALCLSR_ 0 0 0 CON__ENSEMBL:ENSBTAP00000024146 CON__ENSEMBL:ENSBTAP00000024146 CON__ENSEMBL:ENSBTAP00000024146 MULTI-MSMS 210214_Eclipse_Hela_QC 424.226196289062 2 424.226362 846.438172 -0.052979 -2.2475E-05 0.36017 0.00015279 0.30719 0.00013032 424.226442108393 27.527 0.3957 27.527 27.303 27.699 0 15 7 3 0 0 0 0.002161 1 17900 105.04 36.728 1 14032000 + 1018 38 945 957 1189 1189 AGALQCSPSDAYTK 14 Unmodified _AGALQCSPSDAYTK_ 0 0 0 Q9Y490 Q9Y490 Q9Y490 TLN1 Talin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 734.841674804688 2 734.840473 1467.66639 1.121 0.00082373 -0.20334 -0.00014942 0.91762 0.00067431 734.840568456267 30.631 0.84723 30.631 30.175 31.022 0 36 16 3 0 0 0 0.00016337 2 22227 76.143 68.663 1 12374000 1019 4084 946 958 1190;1191 1191 AGAQPGVHALQLEPPTVVETLR 22 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AGAQPGVHALQLEPPTVVETLR_ 1 0 0 Q01970 Q01970 Q01970 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 MULTI-MSMS 210214_Eclipse_Hela_QC 1163.560546875 2 1163.1317 2324.24884 1.7741 0.0020635 0.24032 0.00027952 2.0144 0.002343 1163.63333409008 97.831 0.69535 97.831 97.417 98.113 0 42 13 4 0 0 0 1.0803E-10 2 116662 111.74 107.03 1 6212900 1020 1823 947 959 1192;1193 1193 AGAYDFPSPEWDTVTPEAK 19 Unmodified _AGAYDFPSPEWDTVTPEAK_ 0 0 0 Q13555;Q13554;Q9UQM7;Q13557 Q13555 Q13555 CAMK2G;CAMK2B;CAMK2A;CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit gamma;Calcium/calmodulin-dependent protein kinase type II subunit beta;Calcium/calmodulin-dependent protein kinase type II subunit alpha;Calcium/calmodulin-dependent protein kinase type II subunit delta MULTI-MSMS 210214_Eclipse_Hela_QC 1040.98046875 2 1040.97855 2079.94255 1.2882 0.001341 -0.18089 -0.0001883 1.1074 0.0011527 1040.97783758286 87.508 0.89432 87.508 86.936 87.83 0 26 17 3 0 0 0 0.0031221 1 102316 39.661 34.054 1 5092900 1021 2008 948 960 1194 1194 AGCECLNESDEHGFDNCLR 19 Unmodified _AGCECLNESDEHGFDNCLR_ 0 0 0 O43396 O43396 O43396 TXNL1 Thioredoxin-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 761.968383789062 3 761.633498 2281.87866 1.2239 0.00093217 -0.22249 -0.00016945 1.0014 0.00076272 761.96786953352 45.104 0.89597 45.104 44.587 45.483 0 61 17 6 0 0 0 1.615E-19 1 42850 147.17 147.17 1 53519000 1022 302 949 961 1195 1195 AGCSGLGHPIQLDPNQK 17 Unmodified _AGCSGLGHPIQLDPNQK_ 0 0 0 Q9Y6K5 Q9Y6K5 Q9Y6K5 OAS3 2-5-oligoadenylate synthase 3 MSMS 210214_Eclipse_Hela_QC 597.965454101562 3 597.965065 1790.87337 NaN NaN NaN NaN NaN NaN NaN 39.35 1 39.35 38.85 39.85 0 0 0 0 0.05576 1 34742 27.85 16.795 1 1023 4158 950 962 1196 1196 AGDAGIFVSR 10 Unmodified _AGDAGIFVSR_ 0 0 0 Q14160 Q14160 Q14160 SCRIB Protein scribble homolog MULTI-MSMS 210214_Eclipse_Hela_QC 496.761657714844 2 496.761623 991.508694 0.157 7.7989E-05 -2.9236 -0.0014523 -2.7666 -0.0013743 496.761447449172 40.392 0.34844 40.392 40.213 40.562 0 19 6 5 0 0 0 0.026313 1 36257 42.718 22.197 1 3882100 1024 2062 951 963 1197 1197 AGDEFVEK 8 Unmodified _AGDEFVEK_ 0 0 0 Q16836 Q16836 Q16836 HADH Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 447.713714599609 2 447.713808 893.413062 0.38085 0.00017051 0.32198 0.00014415 0.70283 0.00031467 447.713910254123 23.077 0.44862 23.077 22.952 23.401 0 20 8 3 0 0 0 0.0034458 1 11510 87.251 64.629 1 22628000 1025 2257 952 964 1198 1198 AGDFLENHYR 10 Unmodified _AGDFLENHYR_ 0 0 0 CON__Q2UVX4 CON__Q2UVX4 CON__Q2UVX4 MULTI-MSMS 210214_Eclipse_Hela_QC 407.859771728516 3 407.859755 1220.55744 0.089796 3.6624E-05 -0.035987 -1.4678E-05 0.053809 2.1947E-05 407.859725540394 31.916 1.0903 31.916 31.57 32.66 0 61 21 4 0 0 0 0.00015954 1 23921 93.111 55.635 1 63541000 + 1026 92 953 965 1199 1199 AGDFLENHYR 10 Unmodified _AGDFLENHYR_ 0 0 0 CON__Q2UVX4 CON__Q2UVX4 CON__Q2UVX4 MULTI-MSMS 210214_Eclipse_Hela_QC 611.286315917969 2 611.285994 1220.55744 0.60407 0.00036926 0.093059 5.6886E-05 0.69712 0.00042614 611.28601692272 31.893 0.7919 31.893 31.619 32.411 0 39 15 4 0 0 0 1.1483E-07 1 24051 170.5 128.21 1 41875000 + 1027 92 953 965 1200 1200 AGDISCNADINPLK 14 Unmodified _AGDISCNADINPLK_ 0 0 0 P17301 P17301 P17301 ITGA2 Integrin alpha-2 MULTI-MSMS 210214_Eclipse_Hela_QC 744.362426757812 2 744.361573 1486.70859 1.3472 0.0010028 1.2451 0.0009268 2.5923 0.0019296 744.362400263107 54.385 0.58664 54.385 54.188 54.774 0 30 11 3 0 0 0 6.2983E-05 2 56056 90.05 72.82 1 7281600 1028 932 954 966 1201;1202 1202 AGDLLEDSPK 10 Unmodified _AGDLLEDSPK_ 0 0 0 P51858 P51858 P51858 HDGF Hepatoma-derived growth factor MULTI-MSMS 210214_Eclipse_Hela_QC 522.764892578125 2 522.764029 1043.5135 0.29647 0.00015499 0.068522 3.5821E-05 0.36499 0.00019081 522.764310776816 34.829 0.78208 34.829 34.411 35.193 0 48 16 4 0 0 0 1.3339E-05 2 28112 118.18 79.402 1 31007000 1029 1459 955 967 1203;1204 1204 AGDLSAGFFMEELNTYR 17 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AGDLSAGFFMEELNTYR_ 1 0 0 P19525 P19525 P19525 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase MULTI-MSMS 210214_Eclipse_Hela_QC 982.139587402344 2 981.94874 1961.88293 1.4706 0.0014441 0.080974 7.9512E-05 1.5516 0.0015236 981.948583317141 111.29 0.39877 111.29 111.05 111.44 0 9 7 2 0 0 0 4.1483E-05 1 135265 98.531 93.354 1 3880800 1030 969 956 968 1205 1205 AGDMENAENILTVMR 15 Unmodified _AGDMENAENILTVMR_ 0 0 0 P42704 P42704 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 832.397033691406 2 832.392547 1662.77054 1.2363 0.0010291 -0.055198 -4.5946E-05 1.1811 0.00098316 832.392586139477 87.209 0.74554 87.209 86.837 87.582 0 26 14 2 0 0 0 1.4594E-05 1 101580 120.96 106.54 1 45303000 1031 1278 957 969 1206 1206 AGDNILAVLK 10 Unmodified _AGDNILAVLK_ 0 0 0 Q7Z2K6 Q7Z2K6 Q7Z2K6 ERMP1 Endoplasmic reticulum metallopeptidase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 507.302886962891 2 507.303124 1012.5917 0.74222 0.00037653 0.054393 2.7594E-05 0.79661 0.00040412 507.303106648241 73.683 0.64718 73.683 73.36 74.007 0 29 12 3 0 0 0 0.0011007 1 83011 78.264 51.662 1 10459000 1032 2531 958 970 1207 1207 AGDPVILYVNK 11 Unmodified _AGDPVILYVNK_ 0 0 0 O15321 O15321 O15321 TM9SF1 Transmembrane 9 superfamily member 1 MULTI-MSMS 210214_Eclipse_Hela_QC 594.834411621094 2 594.834788 1187.65502 0.7472 0.00044446 -0.22165 -0.00013185 0.52555 0.00031261 594.834641607072 59.335 0.49662 59.335 59.104 59.601 0 17 9 3 0 0 0 0.035062 1 63165 36.447 20.244 1 2499800 1033 261 959 971 1208 1208 AGDQIICMDDVYGGTNR 17 Unmodified _AGDQIICMDDVYGGTNR_ 0 0 0 P32929 P32929 P32929 CTH Cystathionine gamma-lyase MULTI-MSMS 210214_Eclipse_Hela_QC 942.914672851562 2 942.914375 1883.8142 1.0328 0.00097389 -0.12203 -0.00011506 0.91082 0.00085883 943.416148664593 71.78 0.44795 71.78 71.468 71.916 0 26 8 5 0 0 0 0.00016483 1 80353 86.028 79.924 1 3701900 1034 1161 960 972 1209 1209 AGDTVIPLYIPQCGECK 17 Unmodified _AGDTVIPLYIPQCGECK_ 0 0 0 P11766 P11766 P11766 ADH5 Alcohol dehydrogenase class-3 MULTI-MSMS 210214_Eclipse_Hela_QC 960.964294433594 2 960.963336 1919.91212 1.1881 0.0011417 -0.31898 -0.00030652 0.86912 0.0008352 960.963560152565 85.593 0.79479 85.593 85.246 86.041 0 63 15 5 0 0 0 0.00039415 1 99442 73.848 67.407 1 29868000 1035 839 961 973 1210 1210 AGDWQCPNPGCGNQNFAWR 19 Unmodified _AGDWQCPNPGCGNQNFAWR_ 0 0 0 Q01844 Q01844 Q01844 EWSR1 RNA-binding protein EWS MULTI-MSMS 210214_Eclipse_Hela_QC 1118.46838378906 2 1117.9658 2233.91704 0.33554 0.00037513 -0.80411 -0.00089897 -0.46857 -0.00052384 1118.46659107778 68.803 0.8727 68.803 68.505 69.377 0 48 17 5 0 0 0 3.3119E-26 1 76093 151.26 149.79 1 19104000 1036 1822 962 974 1211 1211 AGEAAELQDAEVESSAK 17 Unmodified _AGEAAELQDAEVESSAK_ 0 0 0 Q9NZT2 Q9NZT2 Q9NZT2 OGFR Opioid growth factor receptor MULTI-MSMS 210214_Eclipse_Hela_QC 852.901428222656 2 852.89977 1703.78499 1.0003 0.00085311 0.063917 5.4515E-05 1.0642 0.00090763 852.899987312469 43.034 0.4481 43.034 42.796 43.244 0 28 8 4 0 0 0 8.3648E-08 1 39868 110.29 103.76 1 9493800 1037 3772 963 975 1212 1212 AGEAEESSAVCQVDAEQR 18 Unmodified _AGEAEESSAVCQVDAEQR_ 0 0 0 Q8N3D4 Q8N3D4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 968.422485351562 2 968.421075 1934.8276 0.13562 0.00013134 0.93632 0.00090676 1.0719 0.0010381 968.923312431217 35.911 0.38461 35.911 35.64 36.025 0 10 7 2 0 0 0 0.0031507 1 29904 43.991 38.607 1 2919300 1038 2679 964 976 1213 1213 AGEAPTENPAPPTQQSSAE 19 Unmodified _AGEAPTENPAPPTQQSSAE_ 0 0 0 P16989 P16989 P16989 YBX3 Y-box-binding protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 941.428527832031 2 941.426684 1880.83881 0.69442 0.00065374 -0.057646 -5.427E-05 0.63677 0.00059947 941.927901496184 37.544 0.68465 37.544 37.21 37.894 0 42 13 4 0 0 0 0.0022957 1 32046 43.798 40.67 1 16682000 1039 924 965 977 1214 1214 AGEGTYALDSESCMEK 16 Unmodified _AGEGTYALDSESCMEK_ 0 0 0 O00541 O00541 O00541 PES1 Pescadillo homolog MULTI-MSMS 210214_Eclipse_Hela_QC 874.361877441406 2 874.361109 1746.70767 1.0784 0.00094291 -0.12772 -0.00011167 0.95068 0.00083123 874.361251576417 44.53 0.49655 44.53 44.24 44.736 0 30 9 4 0 0 0 0.0082267 1 41955 51.013 50.108 1 13886000 1040 170 966 978 1215 1215 AGEQLAPFLPQLVPR 15 Unmodified _AGEQLAPFLPQLVPR_ 0 0 0 Q5VYK3 Q5VYK3 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 818.966735839844 2 818.46449 1634.91443 1.5544 0.0012722 1.4505 0.0011872 3.0049 0.0024594 818.967052175031 105.07 0.39945 105.07 104.83 105.23 0 25 7 4 0 0 0 4.3023E-05 1 126590 91.313 77.078 1 19204000 1041 2385 967 979 1216 1216 AGESVLVHGASGGVGLAACQIAR 23 Unmodified _AGESVLVHGASGGVGLAACQIAR_ 0 0 0 Q08257 Q08257 Q08257 CRYZ Quinone oxidoreductase MULTI-MSMS 210214_Eclipse_Hela_QC 727.7138671875 3 727.379538 2179.11678 1.0572 0.00076901 0.08518 6.1958E-05 1.1424 0.00083097 727.379586643186 63.151 0.54723 63.151 62.827 63.374 0 29 10 5 0 0 0 0.029916 1 68372 20.657 15.947 1 7033700 1042 1883 968 980 1217 1217 AGEVFIHK 8 Unmodified _AGEVFIHK_ 0 0 0 Q15233 Q15233 Q15233 NONO Non-POU domain-containing octamer-binding protein MULTI-MSMS 210214_Eclipse_Hela_QC 450.750640869141 2 450.750527 899.486502 0.10663 4.8062E-05 0.045998 2.0734E-05 0.15262 6.8796E-05 450.750537690547 22.394 0.7464 22.394 22.206 22.952 0 24 14 3 0 0 0 0.004896 1 10519 81.119 50.507 1 94621000 1043 2165 969 981 1218 1218 AGEVINQPMMMAAR 14 Unmodified _AGEVINQPMMMAAR_ 0 0 0 P18206 P18206 P18206 VCL Vinculin MSMS 210214_Eclipse_Hela_QC 759.865478515625 2 759.864914 1517.71527 NaN NaN NaN NaN NaN NaN NaN 60.143 1 60.143 59.643 60.643 0 0 0 0 0.0017077 1 64121 71.349 42.552 1 1044 952 970 982 1219 1219 AGEVVPPAMYQFSQYVCQQTGLQIPQLPAPPK 32 Unmodified _AGEVVPPAMYQFSQYVCQQTGLQIPQLPAPPK_ 0 0 0 Q5XKP0 Q5XKP0 Q5XKP0 QIL1 Protein QIL1 MULTI-MSMS 210214_Eclipse_Hela_QC 1182.26733398438 3 1181.59854 3541.77378 0.92128 0.0010886 -0.11287 -0.00013336 0.80842 0.00095523 1181.93255058535 108.65 0.24834 108.65 108.51 108.75 0 18 4 5 0 0 0 0.012942 1 131591 24.404 22.658 1 11697000 1045 2389 971 983 1220 1220 AGFAGDDAPR 10 Unmodified _AGFAGDDAPR_ 0 0 0 P60709;Q6S8J3;A5A3E0;P0CG38;P0CG39;P63261;P68133;P68032;P63267;P62736 P60709;P63261;P68133 P63261 ACTB;POTEE;POTEF;POTEI;POTEJ;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle MULTI-MSMS 210214_Eclipse_Hela_QC 488.728149414062 2 488.727781 975.441008 0.54522 0.00026646 -1.2992 -0.00063495 -0.75397 -0.00036848 488.727311544378 23.675 0.91841 23.675 23.401 24.319 0 50 18 3 0 0 0 1.5268E-25 3 12225 210.05 192.49 1 2498300000 1046 1582;1718;1727 972 984 1221;1222;1223 1221 AGFAGDDAPR 10 Unmodified _AGFAGDDAPR_ 0 0 0 P60709;Q6S8J3;A5A3E0;P0CG38;P0CG39;P63261;P68133;P68032;P63267;P62736 P60709;P63261;P68133 P63261 ACTB;POTEE;POTEF;POTEI;POTEJ;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle MSMS 210214_Eclipse_Hela_QC 488.727478027344 2 488.727781 975.441008 NaN NaN NaN NaN NaN NaN NaN 24.764 1 24.764 24.264 25.264 0 0 0 0 0.023705 1 13929 56.432 29.829 1 1047 1582;1718;1727 972 984 1224 1224 AGFAGDQIPK 10 Unmodified _AGFAGDQIPK_ 0 0 0 P42025;P61163 P42025;P61163 P61163 ACTR1B;ACTR1A Beta-centractin;Alpha-centractin MULTI-MSMS 210214_Eclipse_Hela_QC 502.264129638672 2 502.263999 1002.51345 -0.16656 -8.3655E-05 0.66854 0.00033579 0.50199 0.00025213 502.264400455111 36.101 0.58976 36.101 35.832 36.421 0 31 11 4 0 0 0 0.038303 1 29988 37.075 15.547 1 25384000 1048 1606;1264 973 985 1225 1225 AGFDSDYDQALADIR 15 Unmodified _AGFDSDYDQALADIR_ 0 0 0 P52701 P52701 P52701 MSH6 DNA mismatch repair protein Msh6 MULTI-MSMS 210214_Eclipse_Hela_QC 828.879455566406 2 828.878641 1655.74273 1.3533 0.0011217 -0.07166 -5.9398E-05 1.2816 0.0010623 828.878608821122 83.203 0.59726 83.203 82.907 83.504 0 42 11 5 0 0 0 0.00013073 1 96174 95.401 79.829 1 14578000 1049 1477 974 986 1226 1226 AGFGAMEK 8 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AGFGAMEK_ 1 0 0 O14929 O14929 O14929 HAT1 Histone acetyltransferase type B catalytic subunit MULTI-MSMS 210214_Eclipse_Hela_QC 852.393188476562 1 852.392015 851.384739 1.4215 0.0012117 -0.38414 -0.00032744 1.0374 0.00088427 852.391663679434 53.814 0.5474 53.814 53.59 54.138 0 26 10 3 0 0 0 0.00080428 1 55136 97.798 97.798 1 7383100 1050 219 975 987 1227 1227 AGFIQDTSLILYEEVKPNLTER 22 Unmodified _AGFIQDTSLILYEEVKPNLTER_ 0 0 1 Q93009 Q93009 Q93009 USP7 Ubiquitin carboxyl-terminal hydrolase 7 MULTI-MSMS 210214_Eclipse_Hela_QC 846.450866699219 3 846.114633 2535.32207 1.1913 0.001008 1.1296 0.00095574 2.3209 0.0019637 846.449362853108 104.88 0.49908 104.88 104.68 105.18 0 29 9 5 0 0 0 0.00026241 1 126356 53.909 50.986 1 5457500 1051 2933 976 988 1228 1228 AGFTAAYSEK 10 Unmodified _AGFTAAYSEK_ 0 0 0 P11717 P11717 P11717 IGF2R Cation-independent mannose-6-phosphate receptor MULTI-MSMS 210214_Eclipse_Hela_QC 522.753723144531 2 522.753464 1043.49238 0.022073 1.1539E-05 0.79323 0.00041466 0.8153 0.0004262 522.753818432963 29.057 0.38667 29.057 28.794 29.181 0 10 7 2 0 0 0 0.036578 1 20060 37.344 19.436 1 3464300 1052 838 977 989 1229 1229 AGGAAVVITEPEHTK 15 Unmodified _AGGAAVVITEPEHTK_ 0 0 0 Q9P258 Q9P258 Q9P258 RCC2 Protein RCC2 MULTI-MSMS 210214_Eclipse_Hela_QC 493.931854248047 3 493.931579 1478.77291 0.24655 0.00012178 0.68191 0.00033681 0.92845 0.00045859 493.931611938474 27.777 1.0345 27.777 27.254 28.288 0 44 20 4 0 0 0 1.8854E-07 1 18183 78.505 65.879 1 41669000 1053 3795 978 990 1230 1230 AGGAAVVITEPEHTK 15 Unmodified _AGGAAVVITEPEHTK_ 0 0 0 Q9P258 Q9P258 Q9P258 RCC2 Protein RCC2 MULTI-MSMS 210214_Eclipse_Hela_QC 740.896118164062 2 740.39373 1478.77291 0.71951 0.00053272 -0.7483 -0.00055403 -0.028782 -2.131E-05 740.393882010524 27.79 0.5375 27.79 27.502 28.04 0 28 10 4 0 0 0 1.1136E-15 1 18207 137.89 121.06 1 28928000 1054 3795 978 990 1231 1231 AGGADAVQTVTGGLR 15 Unmodified _AGGADAVQTVTGGLR_ 0 0 0 Q9H223 Q9H223 Q9H223 EHD4 EH domain-containing protein 4 MULTI-MSMS 210214_Eclipse_Hela_QC 686.863525390625 2 686.862597 1371.71064 0.65711 0.00045134 1.0192 0.00070008 1.6764 0.0011514 686.862834533852 52.377 0.59725 52.377 52.046 52.643 0 24 11 3 0 0 0 0.00018839 1 53134 87.363 65.277 1 4266300 1055 3432 979 991 1232 1232 AGGAGFGTDGDDQEAINEAISVK 23 Unmodified _AGGAGFGTDGDDQEAINEAISVK_ 0 0 0 Q96EB6 Q96EB6 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment MULTI-MSMS 210214_Eclipse_Hela_QC 1112.01574707031 2 1111.51402 2221.01348 0.79766 0.00088661 0.0070299 7.8138E-06 0.80469 0.00089442 1112.01572084914 76.571 0.34832 76.571 76.378 76.726 0 17 6 3 0 0 0 0.038124 1 87119 27.335 27.335 1 2394000 1056 3008 980 992 1233 1233 AGGAGVPAFYTPTGYGTLVQEGGSPIK 27 Unmodified _AGGAGVPAFYTPTGYGTLVQEGGSPIK_ 0 0 0 P55809 P55809 P55809 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1298.66296386719 2 1298.15811 2594.30167 2.2156 0.0028762 -0.55765 -0.00072392 1.658 0.0021523 1298.65884797491 95.222 0.69563 95.222 94.925 95.621 0 56 13 6 0 0 0 3.6662E-05 1 112848 93.51 88.708 1 24852000 1057 1546 981 993 1234 1234 AGGEAGVTLGQPHLSR 16 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AGGEAGVTLGQPHLSR_ 1 0 0 P41091;Q2VIR3 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 796.415100097656 2 796.412985 1590.81142 1.1039 0.00087916 -0.40775 -0.00032474 0.69615 0.00055443 796.412665878153 56.293 0.94592 56.293 55.969 56.915 0 68 18 5 0 0 0 3.5222E-114 1 58656 280.21 269.28 1 122450000 1058 1252 982 994 1235 1235 AGGFASALER 10 Unmodified _AGGFASALER_ 0 0 0 Q9Y2Q9 Q9Y2Q9 Q9Y2Q9 MRPS28 28S ribosomal protein S28, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 489.754302978516 2 489.753798 977.493044 0.33855 0.00016581 1.2267 0.00060079 1.5653 0.00076659 489.754391772264 40.089 0.6959 40.089 39.716 40.412 0 26 13 3 0 0 0 0.012058 1 35813 50.473 27.044 1 9252800 1059 4010 983 995 1236 1236 AGGFVVGYTSSGNPIFR 17 Unmodified _AGGFVVGYTSSGNPIFR_ 0 0 0 Q9HAV4 Q9HAV4 Q9HAV4 XPO5 Exportin-5 MULTI-MSMS 210214_Eclipse_Hela_QC 865.442565917969 2 864.938836 1727.86312 1.5644 0.0013531 -0.42382 -0.00036658 1.1406 0.00098656 864.938540208679 80.93 0.69592 80.93 80.606 81.302 0 37 13 4 0 0 0 0.00036245 1 93093 76.655 70.122 1 7795400 1060 3539 984 996 1237 1237 AGGGAAEQEELHYIPIR 17 Unmodified _AGGGAAEQEELHYIPIR_ 0 0 0 Q8TD19 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 MULTI-MSMS 210214_Eclipse_Hela_QC 604.642456054688 3 604.307597 1809.90096 0.77022 0.00046545 1.003 0.00060612 1.7732 0.0010716 604.642082539233 56.567 0.54736 56.567 56.318 56.865 0 34 10 4 0 0 0 2.0984E-05 1 59071 67.605 59.429 1 4890500 1061 2802 985 997 1238 1238 AGGGPTLQCPPPSSPEK 17 Unmodified _AGGGPTLQCPPPSSPEK_ 0 0 0 Q96N66 Q96N66 Q96N66 MBOAT7 Lysophospholipid acyltransferase 7 MULTI-MSMS 210214_Eclipse_Hela_QC 840.907897949219 2 840.406511 1678.79847 0.99303 0.00083455 -0.043123 -3.6241E-05 0.94991 0.00079831 840.40667271278 32.097 1.0405 32.097 31.669 32.71 0 55 20 4 0 0 0 0.015763 1 24161 48.659 40.249 1 13843000 1062 3102 986 998 1239 1239 AGGIETIANEFSDR 14 Unmodified _AGGIETIANEFSDR_ 0 0 0 Q92598 Q92598 Q92598 HSPH1 Heat shock protein 105 kDa MULTI-MSMS 210214_Eclipse_Hela_QC 740.861022949219 2 740.357345 1478.70014 1.5569 0.0011526 0.89534 0.00066287 2.4522 0.0018155 740.357786617469 74.311 0.74714 74.311 73.907 74.654 0 40 14 4 0 0 0 0.00011424 1 83720 82.171 74.79 1 26731000 1063 2889 987 999 1240 1240 AGGIETIANEYSDR 14 Unmodified _AGGIETIANEYSDR_ 0 0 0 P34932 P34932 P34932 HSPA4 Heat shock 70 kDa protein 4 MULTI-MSMS 210214_Eclipse_Hela_QC 748.857116699219 2 748.354802 1494.69505 1.2628 0.00094503 1.5962 0.0011945 2.859 0.0021396 748.356748703737 57.337 1.692 57.337 56.467 58.159 0 69 33 3 0 0 0 3.5712E-07 1 59996 115.7 99.446 1 47106000 1064 1173 988 1000 1241 1241 AGGPATPLSPTR 12 Unmodified _AGGPATPLSPTR_ 0 0 0 Q03252 Q03252 Q03252 LMNB2 Lamin-B2 MULTI-MSMS 210214_Eclipse_Hela_QC 562.806579589844 2 562.806562 1123.59857 0.59493 0.00033483 2.9475 0.0016589 3.5424 0.0019937 562.806303000289 28.175 0.54477 28.175 27.892 28.437 0 34 10 5 0 0 0 0.00012249 1 18821 92.732 75.619 1 17277000 1065 1839 989 1001 1242 1242 AGGPLLGAAR 10 Unmodified _AGGPLLGAAR_ 0 0 0 REV__Q5VSL9 REV__Q5VSL9 MULTI-MSMS 210214_Eclipse_Hela_QC 441.761535644531 2 441.761426 881.5083 -0.28502 -0.00012591 0.68293 0.00030169 0.39791 0.00017578 441.761805688603 20.008 0.34721 20.008 19.867 20.214 0 17 6 4 0 0 0 0.0012151 2 7155 76.847 19.375 1 16921000 + 1066 4182 990 1002 1243;1244 1244 AGGPTTPLSPTR 12 Unmodified _AGGPTTPLSPTR_ 0 0 0 P20700 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 210214_Eclipse_Hela_QC 577.811401367188 2 577.811845 1153.60914 -0.026016 -1.5032E-05 -0.0563 -3.2531E-05 -0.082316 -4.7563E-05 577.811662365253 28.671 0.89268 28.671 28.288 29.181 0 44 16 4 0 0 0 0.017344 1 19325 41.704 30.994 1 40011000 1067 983 991 1003 1245 1245 AGGSASAMLQPLLDNQVGFK 20 Unmodified _AGGSASAMLQPLLDNQVGFK_ 0 0 0 P20618 P20618 P20618 PSMB1 Proteasome subunit beta type-1 MULTI-MSMS 210214_Eclipse_Hela_QC 1003.01708984375 2 1002.51458 2003.01461 1.9552 0.0019602 -0.16752 -0.00016794 1.7877 0.0017922 1003.01636885921 97.839 1.2926 97.839 97.318 98.61 0 67 25 4 0 0 0 3.2283E-14 2 116474 130.15 125.98 1 63526000 1068 980 992 1004 1246;1247 1247 AGGSPAPGPETPAISPSK 18 Unmodified _AGGSPAPGPETPAISPSK_ 0 0 0 P33316 P33316 P33316 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 811.416137695312 2 810.915027 1619.8155 0.46794 0.00037946 -0.59481 -0.00048234 -0.12687 -0.00010288 810.914480182274 38.421 0.74007 38.421 38.095 38.835 0 38 14 4 0 0 0 0.00011903 1 33251 69.602 64.108 1 15378000 1069 1165 993 1005 1248 1248 AGHYAASIIIR 11 Unmodified _AGHYAASIIIR_ 0 0 0 P55263 P55263 P55263 ADK Adenosine kinase MULTI-MSMS 210214_Eclipse_Hela_QC 391.224426269531 3 391.224257 1170.65094 -0.056576 -2.2134E-05 0.52469 0.00020527 0.46812 0.00018314 391.224486517337 36.119 1.1746 36.119 35.64 36.815 0 40 23 3 0 0 0 0.0047334 1 30210 33.87 26.221 1 6925100 1070 1539 994 1006 1249 1249 AGIEGPLLASDVGR 14 Unmodified _AGIEGPLLASDVGR_ 0 0 0 P18583 P18583 P18583 SON Protein SON MULTI-MSMS 210214_Eclipse_Hela_QC 678.372619628906 2 677.869891 1353.72523 0.25549 0.00017319 0.6828 0.00046285 0.93829 0.00063604 678.371636978807 67.128 0.56639 67.128 66.797 67.363 0 29 11 4 0 0 0 0.010532 1 73848 41.598 27.104 1 10033000 1071 953 995 1007 1250 1250 AGIFQSVK 8 Unmodified _AGIFQSVK_ 0 0 0 P09669 P09669 P09669 COX6C Cytochrome c oxidase subunit 6C MULTI-MSMS 210214_Eclipse_Hela_QC 425.245086669922 2 425.245078 848.475603 -0.12918 -5.4934E-05 -0.30711 -0.0001306 -0.43629 -0.00018553 425.24489862423 35.205 1.2266 35.205 34.798 36.025 0 51 24 4 0 0 0 0.016896 1 28659 56.721 36.239 1 29993000 1072 783 996 1008 1251 1251 AGIIASAR 8 Unmodified _AGIIASAR_ 0 0 0 P13639 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 210214_Eclipse_Hela_QC 380.231323242188 2 379.729595 757.444637 -0.019444 -7.3834E-06 0.088002 3.3417E-05 0.068558 2.6033E-05 379.729572118731 23.077 0.49845 23.077 22.902 23.401 0 29 9 4 0 0 0 0.00034863 1 11580 130.77 55.455 1 71635000 1073 861 997 1009 1252 1252 AGIICQLNAR 10 Unmodified _AGIICQLNAR_ 0 0 0 P33991 P33991 P33991 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 210214_Eclipse_Hela_QC 558.302856445312 2 558.303133 1114.59171 0.5702 0.00031834 -1.0883 -0.0006076 -0.5181 -0.00028926 558.803739115649 43.946 1.3444 43.946 42.995 44.339 0 69 26 5 0 0 0 0.0003008 1 41172 95.352 54.125 1 29713000 1074 1168 998 1010 1253 1253 AGIISTVEVLK 11 Unmodified _AGIISTVEVLK_ 0 0 0 P55786 P55786 P55786 NPEPPS Puromycin-sensitive aminopeptidase MULTI-MSMS 210214_Eclipse_Hela_QC 565.345764160156 2 565.344989 1128.67542 0.69855 0.00039492 -0.1364 -7.7113E-05 0.56215 0.00031781 565.344797789949 71.687 0.79631 71.687 71.368 72.164 0 33 15 3 0 0 0 0.045605 1 80120 34.803 22.214 1 17443000 1075 1544 999 1011 1254 1254 AGILFEDIFDVK 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AGILFEDIFDVK_ 1 0 0 P52434 P52434 P52434 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 MULTI-MSMS 210214_Eclipse_Hela_QC 1409.10131835938 1 1408.73586 1407.72858 2.8651 0.0040362 0.50612 0.00071299 3.3712 0.0047492 1408.73683108712 113.56 0.19875 113.56 113.45 113.65 0 5 3 2 0 0 0 5.1951E-06 1 138326 103.7 93.747 1 1019600 1076 1469 1000 1012 1255 1255 AGILFEDIFDVK 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AGILFEDIFDVK_ 1 0 0 P52434 P52434 P52434 POLR2H DNA-directed RNA polymerases I, II, and III subunit RPABC3 MULTI-MSMS 210214_Eclipse_Hela_QC 704.872924804688 2 704.871568 1407.72858 1.6172 0.0011399 0.41493 0.00029248 2.0321 0.0014324 704.871835268436 113.53 0.34834 113.53 113.35 113.7 0 16 6 4 0 0 0 0.0001382 1 138335 79.974 69.216 1 6765200 1077 1469 1000 1012 1256 1256 AGIPVYAWK 9 Unmodified _AGIPVYAWK_ 0 0 0 P23526 P23526 P23526 AHCY Adenosylhomocysteinase MULTI-MSMS 210214_Eclipse_Hela_QC 502.781646728516 2 502.781828 1003.5491 0.41892 0.00021062 0.22938 0.00011533 0.6483 0.00032595 502.781877309677 63.085 1.144 63.085 62.628 63.772 0 55 22 4 0 0 0 0.0295 1 67950 44.447 27.671 1 26705000 1078 1026 1001 1013 1257 1257 AGIVTSLQAR 10 Unmodified _AGIVTSLQAR_ 0 0 0 P49736 P49736 P49736 MCM2 DNA replication licensing factor MCM2 MULTI-MSMS 210214_Eclipse_Hela_QC 508.299102783203 2 508.298373 1014.58219 0.20482 0.00010411 -0.76795 -0.00039035 -0.56314 -0.00028624 508.297853850194 38.895 0.39595 38.895 38.735 39.131 0 18 7 3 0 0 0 0.004104 1 34063 61.582 13.078 1 15001000 1079 1387 1002 1014 1258 1258 AGKPVICATQMLESMIK 17 Unmodified _AGKPVICATQMLESMIK_ 0 0 1 P14618 P14618 P14618 PKM Pyruvate kinase PKM MULTI-MSMS 210214_Eclipse_Hela_QC 626.66259765625 3 626.327959 1875.96205 0.92432 0.00057893 -0.64788 -0.00040578 0.27645 0.00017315 626.662237165152 90.482 1.7397 90.482 90.008 91.748 0 136 34 7 0 0 0 0.0002147 2 106078 72.489 66.284 1 188600000 1080 882 1003 1015 1259;1260 1259 AGKPVICATQMLESMIK 17 Unmodified _AGKPVICATQMLESMIK_ 0 0 1 P14618 P14618 P14618 PKM Pyruvate kinase PKM MULTI-MSMS 210214_Eclipse_Hela_QC 938.990234375 2 938.9883 1875.96205 1.3488 0.0012665 0.019716 1.8513E-05 1.3685 0.001285 939.489680484506 90.494 0.64633 90.494 90.157 90.803 0 29 12 3 0 0 0 0.0046836 1 106423 79.633 73.909 1 4858000 1081 882 1003 1015 1261 1261 AGLAMPGPPLGPVLGQR 17 Unmodified _AGLAMPGPPLGPVLGQR_ 0 0 0 Q9Y3B7 Q9Y3B7 Q9Y3B7 MRPL11 39S ribosomal protein L11, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 815.958251953125 2 815.958517 1629.90248 1.444 0.0011783 0.13781 0.00011245 1.5819 0.0012907 815.958889177867 92.293 0.69637 92.293 91.897 92.593 0 39 13 4 0 0 0 0.00036818 3 108716 59.542 44.57 1 8006000 1082 4052 1004 1016 1262;1263;1264 1262 AGLELLSDQGYR 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AGLELLSDQGYR_ 1 0 0 Q9NPD3 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 MULTI-MSMS 210214_Eclipse_Hela_QC 682.347900390625 2 682.346249 1362.67794 1.6974 0.0011582 0.39911 0.00027233 2.0965 0.0014305 682.346506634159 102.61 0.74551 102.61 102.24 102.99 0 30 14 3 0 0 0 0.00061645 1 123041 63.283 56.388 1 3178600 1083 3583 1005 1017 1265 1265 AGLESGAEPGDGDSDTTK 18 Unmodified _AGLESGAEPGDGDSDTTK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 210214_Eclipse_Hela_QC 853.869812011719 2 853.87121 1705.72787 0.24458 0.00020884 0.012774 1.0907E-05 0.25735 0.00021975 853.871047562224 25.388 0.44757 25.388 25.164 25.611 0 23 8 4 0 0 0 0.00038876 1 14920 54.7 48.316 1 10375000 1084 400 1006 1018 1266 1266 AGLEVLFASAAPAITCR 17 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AGLEVLFASAAPAITCR_ 1 0 0 Q92530 Q92530 Q92530 PSMF1 Proteasome inhibitor PI31 subunit MSMS 210214_Eclipse_Hela_QC 894.972290039062 2 894.969279 1787.924 NaN NaN NaN NaN NaN NaN NaN 112.61 1 112.61 112.11 113.11 0 0 0 0 5.2705E-16 1 137000 124.12 104.88 1 1085 2878 1007 1019 1267 1267 AGLGSGLSLSGLVHPELSR 19 Unmodified _AGLGSGLSLSGLVHPELSR_ 0 0 0 P49748 P49748 P49748 ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 617.343872070312 3 617.34253 1849.00576 0.88998 0.00054942 -0.067691 -4.1789E-05 0.82229 0.00050763 617.342512001032 84.686 0.84566 84.686 84.301 85.147 0 62 16 6 0 0 0 1.3146E-05 1 98100 78.012 67.766 1 68684000 1086 1388 1008 1020 1268 1268 AGLLEPEVFHLNPAK 15 Unmodified _AGLLEPEVFHLNPAK_ 0 0 0 P23786 P23786 P23786 CPT2 Carnitine O-palmitoyltransferase 2, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 545.969482421875 3 545.634874 1633.88279 1.0886 0.00059396 -0.081569 -4.4507E-05 1.007 0.00054946 545.634726928905 75.603 0.62688 75.603 75.303 75.93 0 38 12 4 0 0 0 0.0042598 1 85655 27.643 23.252 1 9390800 1087 1030 1009 1021 1269 1269 AGLLQPPVR 9 Unmodified _AGLLQPPVR_ 0 0 0 Q8IX12 Q8IX12 Q8IX12 CCAR1 Cell division cycle and apoptosis regulator protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 475.792633056641 2 475.792727 949.5709 0.15307 7.2829E-05 0.35328 0.00016809 0.50635 0.00024092 475.792774672633 46.745 0.89511 46.745 46.28 47.175 0 30 17 2 0 0 0 0.02375 1 45178 47.067 29.681 1 2651800 1088 2633 1010 1022 1270 1270 AGLNCSTENMPIK 13 Oxidation (M) _AGLNCSTENM(Oxidation (M))PIK_ AGLNCSTENM(1)PIK AGLNCSTENM(43)PIK 0 1 0 P05198 P05198 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 726.338256835938 2 725.836876 1449.6592 0.8952 0.00064977 -1.1654 -0.00084588 -0.27018 -0.00019611 725.835963055933 42.196 0.49409 42.196 41.953 42.448 0 14 9 2 0 0 0 0.030959 1 38818 43.308 22.978 1 3572000 1089 683 1011 1023 1271 1271 100 AGLNCSTENMPIK 13 Unmodified _AGLNCSTENMPIK_ 0 0 0 P05198 P05198 P05198 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 MSMS 210214_Eclipse_Hela_QC 717.840698242188 2 717.839419 1433.66428 NaN NaN NaN NaN NaN NaN NaN 42.082 1 42.082 41.582 42.582 0 0 0 0 4.8574E-11 1 38614 153.97 128.41 1 1090 683 1011 1024 1272 1272 AGLNEMVEYITHSR 14 Unmodified _AGLNEMVEYITHSR_ 0 0 0 Q14738 Q14738 Q14738 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform MULTI-MSMS 210214_Eclipse_Hela_QC 540.600280761719 3 540.599723 1618.77734 0.72649 0.00039274 0.074469 4.0258E-05 0.80096 0.000433 540.599755139864 82.757 0.5514 82.757 82.604 83.156 0 23 11 3 0 0 0 0.003482 1 95907 45.434 38.232 1 3521400 1091 2109 1012 1025 1273 1273 AGLNSLEAVK 10 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AGLNSLEAVK_ 1 0 0 P67936 P67936 P67936 TPM4 Tropomyosin alpha-4 chain MULTI-SECPEP 210214_Eclipse_Hela_QC 1043.88232421875 1 1043.57315 1042.56587 1.0901 0.0011376 -0.0085717 -8.9452E-06 1.0815 0.0011287 1043.57304804671 74.082 0.84625 74.082 73.758 74.604 0 49 16 4 0 0 0 1.7671E-06 1 84017 147.2 99.351 1 62013000 1092 1726 1013 1026 1274 1274 AGLPCQDLEFVQFHPTGIYGAGCLITEGCR 30 Unmodified _AGLPCQDLEFVQFHPTGIYGAGCLITEGCR_ 0 0 0 P31040 P31040 P31040 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1123.53308105469 3 1122.86166 3365.56314 1.2224 0.0013726 1.0419 0.0011699 2.2644 0.0025426 1123.53116975148 104.95 0.64819 104.95 104.58 105.23 0 41 12 7 0 0 0 3.9112E-50 1 126452 172.75 170.7 1 82105000 1093 1138 1014 1027 1275 1275 AGLQFPVGR 9 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;Q99878;Q96KK5;Q9BTM1;Q93077;Q7L7L0;P20671;P0C0S8;P04908;Q16777;Q6FI13;Q71UI9;P0C0S5;P16104;Q96QV6 Q8IUE6;Q99878;Q71UI9;P16104 P16104 HIST2H2AB;HIST1H2AJ;HIST1H2AH;H2AFJ;HIST1H2AC;HIST3H2A;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST2H2AC;HIST2H2AA3;H2AFV;H2AFZ;H2AFX;HIST1H2AA Histone H2A type 2-B;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A.V;Histone H2A.Z;Histone H2AX;Histone H2A type 1-A MULTI-MSMS 210214_Eclipse_Hela_QC 472.769714355469 2 472.769252 943.52395 0.57031 0.00026963 0.064164 3.0335E-05 0.63448 0.00029996 472.769173959163 60.224 1.7908 60.224 59.403 61.193 0 60 35 2 0 0 0 0.026711 1 63615 45.718 17.206 1 5766700 1094 2612;674;788;910 1015 1028 1276 1276 AGLQFPVGR 9 Unmodified _AGLQFPVGR_ 0 0 0 Q8IUE6;Q99878;Q96KK5;Q9BTM1;Q93077;Q7L7L0;P20671;P0C0S8;P04908;Q16777;Q6FI13;Q71UI9;P0C0S5;P16104;Q96QV6 Q8IUE6;Q99878;Q71UI9;P16104 P16104 HIST2H2AB;HIST1H2AJ;HIST1H2AH;H2AFJ;HIST1H2AC;HIST3H2A;HIST1H2AD;HIST1H2AG;HIST1H2AB;HIST2H2AC;HIST2H2AA3;H2AFV;H2AFZ;H2AFX;HIST1H2AA Histone H2A type 2-B;Histone H2A type 1-J;Histone H2A type 1-H;Histone H2A.J;Histone H2A type 1-C;Histone H2A type 3;Histone H2A type 1-D;Histone H2A type 1;Histone H2A type 1-B/E;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A.V;Histone H2A.Z;Histone H2AX;Histone H2A type 1-A MULTI-MSMS 210214_Eclipse_Hela_QC 472.768829345703 2 472.769252 943.52395 0.31343 0.00014818 0.22964 0.00010857 0.54307 0.00025675 472.769366845563 63.586 1.4434 63.586 62.827 64.27 0 43 28 2 0 0 0 0.026057 2 68793 46.016 24.113 1 1567700 1095 2612;674;788;910 1015 1028 1277;1278 1277 AGLQVYNK 8 Unmodified _AGLQVYNK_ 0 0 0 P13987 P13987 P13987 CD59 CD59 glycoprotein MULTI-MSMS 210214_Eclipse_Hela_QC 446.747528076172 2 446.747985 891.481417 -0.93883 -0.00041942 0.19126 8.5446E-05 -0.74757 -0.00033397 446.748160023237 25.192 0.49713 25.192 24.965 25.462 0 23 9 3 0 0 0 4.3286E-05 1 14547 148.28 90.114 1 74970000 1096 872 1016 1029 1279 1279 AGLTEPVLIR 10 Unmodified _AGLTEPVLIR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 210214_Eclipse_Hela_QC 535.326416015625 2 534.824224 1067.63389 1.3491 0.00072151 -0.12657 -6.7693E-05 1.2225 0.00065381 534.82409516411 60.649 0.6465 60.649 60.299 60.945 0 28 12 3 0 0 0 0.002743 2 64727 66.351 19.357 1 5659200 1097 2803 1017 1030 1280;1281 1281 AGLTLFVGR 9 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AGLTLFVGR_ 1 0 0 Q9NW13 Q9NW13 Q9NW13 RBM28 RNA-binding protein 28 MULTI-SECPEP 210214_Eclipse_Hela_QC 976.167663574219 1 975.562192 974.554916 1.0729 0.0010466 0.57641 0.00056232 1.6493 0.001609 975.562668337842 107 0.24846 107 106.86 107.11 0 8 4 2 0 0 0 0.049624 1 129196 40.103 17.972 1 3812200 1098 3698 1018 1031 1282 1282 AGLVDDFEK 9 Unmodified _AGLVDDFEK_ 0 0 0 O75947 O75947 O75947 ATP5H ATP synthase subunit d, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 497.247650146484 2 497.248015 992.481476 0.8627 0.00042897 -1.0581 -0.00052612 -0.19536 -9.7143E-05 497.248000656757 50.851 1.3183 50.851 50.229 51.548 0 81 26 5 0 0 0 0.0004508 1 50767 102.51 53.155 1 67884000 1099 501 1019 1032 1283 1283 AGLVGPEFHEK 11 Unmodified _AGLVGPEFHEK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 592.309326171875 2 592.308938 1182.60332 0.75687 0.0004483 -0.93026 -0.000551 -0.17339 -0.0001027 592.308312714924 30.49 1.0962 30.49 30.125 31.222 0 56 21 3 0 0 0 0.0058082 1 21935 52.49 31.969 1 16118000 1100 2158 1020 1033 1284 1284 AGLVGPEFHEK 11 Unmodified _AGLVGPEFHEK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 395.208374023438 3 395.208384 1182.60332 0.2351 9.2914E-05 0.12549 4.9594E-05 0.36059 0.00014251 395.208504633637 30.448 1.0463 30.448 30.125 31.172 0 31 20 2 0 0 0 0.0019128 1 21992 43.68 30.89 1 21687000 1101 2158 1020 1033 1285 1285 AGMAAVASPTGNCDLER 17 Unmodified _AGMAAVASPTGNCDLER_ 0 0 0 Q6P1M0 Q6P1M0 Q6P1M0 SLC27A4 Long-chain fatty acid transport protein 4 MULTI-MSMS 210214_Eclipse_Hela_QC 860.893981933594 2 860.393078 1718.7716 0.82451 0.0007094 -0.44353 -0.00038161 0.38098 0.00032779 860.893865982567 46.712 0.44816 46.712 46.428 46.877 0 18 8 3 0 0 0 0.00044135 1 45105 55.452 40.762 1 4772100 1102 2444 1021 1034 1286 1286 AGMSAEQAQGLLEK 14 Unmodified _AGMSAEQAQGLLEK_ 0 0 0 Q9Y2Q3 Q9Y2Q3 Q9Y2Q3 GSTK1 Glutathione S-transferase kappa 1 MULTI-MSMS 210214_Eclipse_Hela_QC 716.859252929688 2 716.858666 1431.70278 0.69469 0.00049799 -0.92594 -0.00066376 -0.23125 -0.00016577 716.857402240894 52.921 0.84725 52.921 52.344 53.192 0 70 16 6 0 0 0 8.6918E-20 1 53839 160.18 136.15 1 24232000 1103 4008 1022 1035 1287 1287 AGMTHIVR 8 Unmodified _AGMTHIVR_ 0 0 0 P39023 P39023 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 210214_Eclipse_Hela_QC 442.742218017578 2 442.742179 883.469806 -0.30579 -0.00013538 -0.55891 -0.00024745 -0.8647 -0.00038284 442.74211796341 19.742 0.54692 19.742 19.568 20.115 0 33 10 5 0 0 0 5.8547E-15 1 6807 196.65 168.48 1 95282000 1104 1232 1023 1036 1288 1288 AGMVDFQDEEQVK 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AGMVDFQDEEQVK_ 1 0 0 Q96BR5 Q96BR5 Q96BR5 COA7 Cytochrome c oxidase assembly factor 7 MULTI-MSMS 210214_Eclipse_Hela_QC 769.849243164062 2 769.345588 1536.67662 1.9689 0.0015148 -0.044325 -3.4101E-05 1.9246 0.0014807 769.345565563114 83.607 0.69627 83.607 83.256 83.952 0 31 13 4 0 0 0 0.00056645 1 96731 59.908 52.779 1 4392100 1105 2979 1024 1037 1289 1289 AGNAIHAILLYR 12 Unmodified _AGNAIHAILLYR_ 0 0 0 P50416 P50416 P50416 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform MULTI-MSMS 210214_Eclipse_Hela_QC 437.922943115234 3 437.922578 1310.7459 0.73974 0.00032395 0.002607 1.1416E-06 0.74235 0.00032509 437.922556024609 57.116 0.59667 57.116 56.765 57.362 0 26 11 3 0 0 0 0.00088213 1 59758 48.004 44.142 1 2847300 1106 1413 1025 1038 1290 1290 AGNFYVPAEPK 11 Unmodified _AGNFYVPAEPK_ 0 0 0 P18124 P18124 P18124 RPL7 60S ribosomal protein L7 MULTI-MSMS 210214_Eclipse_Hela_QC 596.804321289062 2 596.803488 1191.59242 1.0998 0.00065638 0.066743 3.9833E-05 1.1666 0.00069621 596.803422027612 47.452 1.2823 47.452 47.175 48.457 0 78 25 6 0 0 0 6.9404E-06 1 46100 143.39 127.25 1 126460000 1107 951 1026 1039 1291 1291 AGNILLTEPGQVK 13 Unmodified _AGNILLTEPGQVK_ 0 0 0 Q7L7X3 Q7L7X3 Q7L7X3 TAOK1 Serine/threonine-protein kinase TAO1 MULTI-MSMS 210214_Eclipse_Hela_QC 670.383911132812 2 670.382634 1338.75072 0.90069 0.00060381 -0.22466 -0.00015061 0.67603 0.0004532 670.3825486687 54.691 0.54692 54.691 54.426 54.973 0 18 10 3 0 0 0 0.049235 1 56434 32.606 17.458 1 2669400 1108 2525 1027 1040 1292 1292 AGNLGGGVVTIER 13 Unmodified _AGNLGGGVVTIER_ 0 0 0 P35268 P35268 P35268 RPL22 60S ribosomal protein L22 MULTI-MSMS 210214_Eclipse_Hela_QC 621.843872070312 2 621.843676 1241.6728 0.73278 0.00045567 -0.257 -0.00015981 0.47577 0.00029586 621.843554590036 47.1 1.5422 47.1 46.727 48.269 0 83 30 5 0 0 0 7.213E-06 2 45497 105.46 66.156 1 256960000 1109 1185 1028 1041 1293;1294 1293 AGNNMLLVGVHGPR 14 Unmodified _AGNNMLLVGVHGPR_ 0 0 0 P21333 P21333 P21333 FLNA Filamin-A MULTI-MSMS 210214_Eclipse_Hela_QC 478.9267578125 3 478.925994 1433.75615 0.44472 0.00021299 0.50178 0.00024031 0.94649 0.0004533 478.926068123382 46.304 1.0453 46.304 45.831 46.877 0 58 20 4 0 0 0 9.8105E-05 1 44356 54.524 45.012 1 67316000 1110 995 1029 1042 1295 1295 AGNVIFR 7 Unmodified _AGNVIFR_ 0 0 0 P55809 P55809 P55809 OXCT1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 388.724700927734 2 388.724313 775.434072 0.59386 0.00023085 -0.24656 -9.5844E-05 0.3473 0.000135 388.724155093088 29.908 0.84535 29.908 29.529 30.374 0 32 16 3 0 0 0 0.015205 1 21286 69.432 21.259 1 10740000 1111 1546 1030 1043 1296 1296 AGPDLPSLPSHALEDEGWAAAAPSPGSAR 29 Unmodified _AGPDLPSLPSHALEDEGWAAAAPSPGSAR_ 0 0 0 Q9H3Q1 Q9H3Q1 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 MULTI-MSMS 210214_Eclipse_Hela_QC 943.463134765625 3 943.126372 2826.35729 1.375 0.0012968 0.70092 0.00066106 2.0759 0.0019578 943.461225690557 87.857 0.79603 87.857 87.383 88.179 0 51 15 5 0 0 0 0.023291 1 102793 20.271 14.304 1 6029000 1112 3459 1031 1044 1297 1297 AGPELLLDSNIR 12 Unmodified _AGPELLLDSNIR_ 0 0 0 Q9P0I2 Q9P0I2 Q9P0I2 EMC3 ER membrane protein complex subunit 3 MULTI-MSMS 210214_Eclipse_Hela_QC 649.360290527344 2 649.359159 1296.70376 0.68594 0.00044542 0.63766 0.00041407 1.3236 0.00085949 649.359903069851 72.313 0.44756 72.313 71.965 72.413 0 11 8 2 0 0 0 0.033865 1 81239 33.961 16.097 1 1330900 1113 3783 1032 1045 1298 1298 AGPEPQELQGIR 12 Unmodified _AGPEPQELQGIR_ 0 0 0 Q13671 Q13671 Q13671 RIN1 Ras and Rab interactor 1 MULTI-MSMS 210214_Eclipse_Hela_QC 647.8427734375 2 647.841133 1293.66771 0.95211 0.00061681 0.55823 0.00036165 1.5103 0.00097846 647.841263275116 43.767 0.54741 43.767 43.494 44.041 0 14 10 2 0 0 0 0.021023 1 41061 38.75 22.079 1 4898700 1114 2030 1033 1046 1299 1299 AGPESDAQYQFTGIK 15 Unmodified _AGPESDAQYQFTGIK_ 0 0 0 Q96IX5 Q96IX5 Q96IX5 USMG5 Up-regulated during skeletal muscle growth protein 5 MULTI-MSMS 210214_Eclipse_Hela_QC 806.387573242188 2 806.386102 1610.75765 1.1511 0.00092826 0.36551 0.00029474 1.5166 0.001223 806.386312922278 56.173 0.94629 56.173 55.819 56.765 0 67 18 5 0 0 0 5.6091E-68 2 58445 242.82 220.13 1 58781000 1115 3068 1034 1047 1300;1301 1300 AGPGSLELCGLPSQK 15 Unmodified _AGPGSLELCGLPSQK_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 210214_Eclipse_Hela_QC 757.889770507812 2 757.38759 1512.76063 -0.12085 -9.1532E-05 0.50826 0.00038495 0.3874 0.00029342 757.38819820389 62.179 0.59102 62.179 61.79 62.381 0 21 11 3 0 0 0 5.4536E-07 1 66913 105.17 78.498 1 9110300 1116 2101 1035 1048 1302 1302 AGPGTLSVTIEGPSK 15 Unmodified _AGPGTLSVTIEGPSK_ 0 0 0 O75369 O75369 O75369 FLNB Filamin-B MULTI-MSMS 210214_Eclipse_Hela_QC 707.3837890625 2 707.382831 1412.75111 1.808 0.001279 0.17364 0.00012283 1.9817 0.0014018 707.382913775191 55.545 1.0455 55.545 55.173 56.218 0 62 20 5 0 0 0 1.8913E-07 1 57403 137.16 114.01 1 77956000 1117 445 1036 1049 1303 1303 AGPIWDLR 8 Unmodified _AGPIWDLR_ 0 0 0 O60506;O43390 O60506;O43390 O43390 SYNCRIP;HNRNPR Heterogeneous nuclear ribonucleoprotein Q;Heterogeneous nuclear ribonucleoprotein R MULTI-MSMS 210214_Eclipse_Hela_QC 464.255981445312 2 464.255977 926.497401 0.46758 0.00021708 -0.24961 -0.00011588 0.21796 0.00010119 464.255823234523 63.484 1.1949 63.484 63.075 64.27 0 75 23 4 0 0 0 0.015494 1 68538 58.815 19.597 1 75255000 1118 300;373 1037 1050 1304 1304 AGPNASIISLK 11 Unmodified _AGPNASIISLK_ 0 0 0 Q9H0A0 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MSMS 210214_Eclipse_Hela_QC 535.814208984375 2 535.813856 1069.61316 NaN NaN NaN NaN NaN NaN NaN 51.296 1 51.296 50.796 51.796 0 0 0 0 0.0035865 1 51668 81.338 58.598 1 1119 3406 1038 1051 1305 1305 AGPPASIVPLMR 12 Unmodified _AGPPASIVPLMR_ 0 0 0 O96013 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 MULTI-MSMS 210214_Eclipse_Hela_QC 403.565063476562 3 403.565514 1207.67471 -0.64789 -0.00026147 -0.89593 -0.00036157 -1.5438 -0.00062303 403.565572177096 26.222 0.54819 26.222 26.009 26.557 0 24 10 3 0 0 0 0.044178 1 16038 18.625 0.85231 1 13541000 1120 615 1039 1052 1306 1306 AGPQPLALQLEQLLNPR 17 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AGPQPLALQLEQLLNPR_ 1 0 0 Q9NY61 Q9NY61 Q9NY61 AATF Protein AATF MULTI-MSMS 210214_Eclipse_Hela_QC 950.536743164062 2 950.536175 1899.0578 1.9085 0.0018141 0.033742 3.2073E-05 1.9422 0.0018462 951.037751268395 112.95 0.29373 112.95 112.83 113.12 0 16 5 4 0 0 0 2.6752E-18 1 137485 144.57 121.85 1 6958900 1121 3737 1040 1053 1307 1307 AGQAVDDFIEK 11 Unmodified _AGQAVDDFIEK_ 0 0 0 P52209 P52209 P52209 PGD 6-phosphogluconate dehydrogenase, decarboxylating MULTI-MSMS 210214_Eclipse_Hela_QC 596.796203613281 2 596.79586 1191.57717 1.0458 0.0006241 -0.21826 -0.00013026 0.82749 0.00049384 596.795623228804 47.1 0.64677 47.1 46.628 47.274 0 32 12 3 0 0 0 0.00016664 1 45548 94.309 72.266 1 83527000 1122 1463 1041 1054 1308 1308 AGQCVIGLQMGTNK 14 Unmodified _AGQCVIGLQMGTNK_ 0 0 0 Q99439 Q99439 Q99439 CNN2 Calponin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 739.371276855469 2 738.868511 1475.72247 0.78403 0.0005793 -0.27016 -0.00019962 0.51387 0.00037968 738.868504713419 52.345 0.64708 52.345 51.996 52.643 0 35 12 4 0 0 0 4.8276E-05 2 52958 109.6 94.333 1 11894000 1123 3157 1042 1055 1309;1310 1309 AGQEDVLFPVAR 12 Unmodified _AGQEDVLFPVAR_ 0 0 0 Q5JTZ9 Q5JTZ9 Q5JTZ9 AARS2 Alanine--tRNA ligase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 651.347290039062 2 651.346052 1300.67755 0.97203 0.00063313 0.39169 0.00025513 1.3637 0.00088825 651.346298943294 67.706 0.44757 67.706 67.511 67.959 0 14 8 2 0 0 0 0.03447 1 74951 45.161 36.629 1 2520600 1124 2332 1043 1056 1311 1311 AGQMVTVWAAGAGVAHSPPSTLVWK 25 Unmodified _AGQMVTVWAAGAGVAHSPPSTLVWK_ 0 0 0 Q03252 Q03252 Q03252 LMNB2 Lamin-B2 MULTI-MSMS 210214_Eclipse_Hela_QC 841.441223144531 3 841.105526 2520.29475 1.6958 0.0014264 -0.79611 -0.00066961 0.8997 0.00075674 841.439301067133 88.99 0.54744 88.99 88.765 89.312 0 30 10 4 0 0 0 0.018407 2 104321 25.407 22.684 1 4532600 1125 1839 1044 1057 1312;1313 1313 AGQSAAGAAPGGGVDTR 17 Unmodified _AGQSAAGAAPGGGVDTR_ 0 0 0 P21333 P21333 P21333 FLNA Filamin-A MULTI-MSMS 210214_Eclipse_Hela_QC 721.853393554688 2 721.852761 1441.69097 0.83097 0.00059984 -0.050027 -3.6112E-05 0.78094 0.00056372 721.85265907628 20.389 0.44801 20.389 20.066 20.514 0 17 8 3 0 0 0 7.9739E-12 1 7610 124.07 104.8 1 13658000 1126 995 1045 1058 1314 1314 AGQTTYSGVIDCFR 14 Unmodified _AGQTTYSGVIDCFR_ 0 0 0 O75746;Q9UJS0 O75746;Q9UJS0 Q9UJS0 SLC25A12;SLC25A13 Calcium-binding mitochondrial carrier protein Aralar1;Calcium-binding mitochondrial carrier protein Aralar2 MULTI-MSMS 210214_Eclipse_Hela_QC 788.368469238281 2 787.867022 1573.71949 1.7698 0.0013943 -0.88724 -0.00069902 0.88254 0.00069533 788.367729977391 65.686 0.4973 65.686 65.453 65.95 0 28 9 4 0 0 0 0.00036147 2 71839 78.096 62.206 1 11329000 1127 3895;481 1046 1059 1315;1316 1315 AGQTVTIWAANAGVTASPPTDLIWK 25 Unmodified _AGQTVTIWAANAGVTASPPTDLIWK_ 0 0 0 P20700 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 210214_Eclipse_Hela_QC 1285.181640625 2 1284.67647 2567.33839 1.5173 0.0019493 0.7824 0.0010051 2.2997 0.0029544 1285.17851306179 106.15 0.39805 106.15 105.97 106.37 0 23 7 5 0 0 0 1.1399E-24 1 128099 142.94 130.45 1 38510000 1128 983 1047 1060 1317 1317 AGQVLEYLCPSGFYPYPTQIR 21 Unmodified _AGQVLEYLCPSGFYPYPTQIR_ 0 0 0 CON__Q3KUS7 CON__Q3KUS7 CON__Q3KUS7 MULTI-MSMS 210214_Eclipse_Hela_QC 410.875457763672 6 410.707129 2458.19912 -0.074811 -3.0725E-05 0.98658 0.00040519 0.91177 0.00037447 410.875238100747 30.399 1.2952 30.399 30.076 31.371 0 33 25 2 0 0 0 0.056483 1 21924 12.128 0.34033 1 42116000 + 1129 94 1048 1061 1318 1318 AGQVLEYLCPSGFYPYPTQIR 21 Unmodified _AGQVLEYLCPSGFYPYPTQIR_ 0 0 0 CON__Q3KUS7 CON__Q3KUS7 CON__Q3KUS7 MULTI-MSMS 210214_Eclipse_Hela_QC 1230.61047363281 2 1230.10684 2458.19912 1.5942 0.001961 -0.021418 -2.6347E-05 1.5727 0.0019346 1230.60852660699 105.5 0.34885 105.5 105.38 105.72 0 24 6 6 0 0 0 2.2794E-28 1 127266 193.96 182.7 1 50043000 + 1130 94 1048 1061 1319 1319 AGQVVTIWAAGAGATHSPPTDLVWK 25 Unmodified _AGQVVTIWAAGAGATHSPPTDLVWK_ 0 0 0 P02545 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 210214_Eclipse_Hela_QC 845.447875976562 3 845.111446 2532.31251 1.3558 0.0011458 0.12827 0.0001084 1.4841 0.0012542 845.445913240219 90.584 2.2377 90.584 90.157 92.395 0 132 44 7 0 0 0 5.7194E-25 4 106415 109.26 106.11 1 96628000 1131 640 1049 1062 1320;1321;1322;1323 1322 AGQYSSDLR 9 Unmodified _AGQYSSDLR_ 0 0 0 CON__Q2UVX4 CON__Q2UVX4 CON__Q2UVX4 MULTI-MSMS 210214_Eclipse_Hela_QC 498.800659179688 2 498.740888 995.467223 -0.32009 -0.00015964 0.23596 0.00011769 -0.084126 -4.1957E-05 498.741029935065 21.877 0.34808 21.877 21.709 22.057 0 15 6 3 0 0 0 3.2068E-05 2 9717 127.02 90.894 1 17113000 + 1132 92 1050 1063 1324;1325 1324 AGSALPGFANSPAGSTSVVLVPPAHGTLVPDGNK 34 Unmodified _AGSALPGFANSPAGSTSVVLVPPAHGTLVPDGNK_ 0 0 0 O15027 O15027 O15027 SEC16A Protein transport protein Sec16A MULTI-MSMS 210214_Eclipse_Hela_QC 1062.89599609375 3 1062.55784 3184.65168 1.1816 0.0012556 0.85166 0.00090493 2.0333 0.0021605 1062.8932182178 91.193 0.54691 91.193 90.952 91.499 0 33 10 5 0 0 0 0.042436 1 107406 13.845 11.707 1 3353300 1133 232 1051 1064 1326 1326 AGSATVLSGSIAGLEGGSQLALR 23 Unmodified _AGSATVLSGSIAGLEGGSQLALR_ 0 0 0 Q92614 Q92614 Q92614 MYO18A Unconventional myosin-XVIIIa MULTI-MSMS 210214_Eclipse_Hela_QC 1058.57800292969 2 1058.07385 2114.13315 1.954 0.0020674 -0.31692 -0.00033533 1.637 0.0017321 1058.5752915838 93.503 0.44711 93.503 93.24 93.687 0 19 8 3 0 0 0 0.00092971 1 110611 46.3 34.324 1 1863300 1134 2892 1052 1065 1327 1327 AGSDGESIGNCPFSQR 16 Unmodified _AGSDGESIGNCPFSQR_ 0 0 0 Q9Y696 Q9Y696 Q9Y696 CLIC4 Chloride intracellular channel protein 4 MULTI-MSMS 210214_Eclipse_Hela_QC 841.366394042969 2 841.365375 1680.7162 0.49287 0.00041469 -0.14411 -0.00012125 0.34876 0.00029343 841.365338896288 41.139 0.6959 41.139 40.86 41.556 0 47 13 5 0 0 0 3.7668E-16 2 37162 138.45 132.21 1 34283000 1135 4140 1053 1066 1328;1329 1329 AGSNMLLIGVHGPTTPCEEVSMK 23 Unmodified _AGSNMLLIGVHGPTTPCEEVSMK_ 0 0 0 O75369 O75369 O75369 FLNB Filamin-B MULTI-MSMS 210214_Eclipse_Hela_QC 810.396911621094 3 810.060489 2427.15964 1.484 0.0012022 -0.02586 -2.0948E-05 1.4582 0.0011812 810.395204999595 73.633 1.1948 73.633 73.26 74.455 0 87 23 7 0 0 0 1.5087E-05 1 82716 66.871 63.727 1 82690000 1136 445 1054 1067 1330 1330 AGSPTLLNCLMYK 13 Unmodified _AGSPTLLNCLMYK_ 0 0 0 Q8TCJ2 Q8TCJ2 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B MULTI-MSMS 210214_Eclipse_Hela_QC 734.871398925781 2 734.370355 1466.72616 0.47722 0.00035046 2.5228 0.0018527 3.0001 0.0022032 734.372429128215 80.185 0.99323 80.185 79.861 80.854 0 34 19 2 0 0 0 0.003463 1 91903 63.283 47.145 1 11729000 1137 2797 1055 1068 1331 1331 AGSSTPGDAPPAVAEVQGR 19 Unmodified _AGSSTPGDAPPAVAEVQGR_ 0 0 0 Q7Z6Z7 Q7Z6Z7 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 MULTI-MSMS 210214_Eclipse_Hela_QC 883.938171386719 2 883.937022 1765.85949 0.96833 0.00085594 -0.2849 -0.00025183 0.68344 0.00060411 884.438138917927 42.311 0.69334 42.311 41.953 42.647 0 41 13 4 0 0 0 0.00060451 1 38747 52.265 36.128 1 15970000 1138 2557 1056 1069 1332 1332 AGSSWQCDTCLLQNK 15 Unmodified _AGSSWQCDTCLLQNK_ 0 0 0 P49790 P49790 P49790 NUP153 Nuclear pore complex protein Nup153 MULTI-MSMS 210214_Eclipse_Hela_QC 884.394897460938 2 884.393078 1766.7716 1.388 0.0012276 0.48354 0.00042764 1.8716 0.0016552 884.39374777881 57.572 0.4482 57.572 57.362 57.81 0 16 8 3 0 0 0 0.0044171 1 60552 47.894 43.644 1 3819100 1139 1396 1057 1070 1333 1333 AGTDPSHMPTGPQAASCLDLNLVTR 25 Unmodified _AGTDPSHMPTGPQAASCLDLNLVTR_ 0 0 0 Q9BQG0 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 870.753967285156 3 870.419733 2608.23737 1.4208 0.0012367 0.20866 0.00018162 1.6294 0.0014183 870.754130846041 79.04 0.69657 79.04 78.717 79.413 0 42 13 4 0 0 0 6.0819E-07 1 90425 71.052 64.492 1 24283000 1140 3227 1058 1071 1334 1334 AGTGVDNVDLEAATR 15 Unmodified _AGTGVDNVDLEAATR_ 0 0 0 O43175 O43175 O43175 PHGDH D-3-phosphoglycerate dehydrogenase MULTI-MSMS 210214_Eclipse_Hela_QC 744.869506835938 2 744.868076 1487.7216 1.3533 0.001008 -0.036104 -2.6893E-05 1.3172 0.00098115 744.867962833572 50.355 1.0447 50.355 49.931 50.976 0 66 20 5 0 0 0 3.9885E-16 2 50146 182.71 147.17 1 226660000 1141 288 1059 1072 1335;1336 1335 AGTLLPVIQFLQK 13 Unmodified _AGTLLPVIQFLQK_ 0 0 0 Q15269 Q15269 Q15269 PWP2 Periodic tryptophan protein 2 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 714.936767578125 2 714.43467 1426.85479 0.84396 0.00060295 0.21026 0.00015022 1.0542 0.00075317 714.434770223545 106.5 0.19943 106.5 106.37 106.57 0 13 3 5 0 0 0 0.00131 1 128615 74.376 70.222 1 30037000 1142 2167 1060 1073 1337 1337 AGTLSITEFADMLSGNAGGFR 21 Unmodified _AGTLSITEFADMLSGNAGGFR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 1058.51550292969 2 1058.0124 2114.01025 1.8552 0.0019628 -2.2193 -0.002348 -0.36406 -0.00038518 1058.51390203816 108.34 0.44795 108.34 108.06 108.51 0 34 8 6 0 0 0 2.2841E-79 1 131174 230.06 206.94 1 28680000 1143 2158 1061 1074 1338 1338 AGTLTVEELGATLTSLLAQAQAQAR 25 Unmodified _AGTLTVEELGATLTSLLAQAQAQAR_ 0 0 0 P58107 P58107 P58107 EPPK1 Epiplakin MULTI-MSMS 210214_Eclipse_Hela_QC 1257.68481445312 2 1257.18212 2512.34968 2.4087 0.0030282 -0.34411 -0.00043261 2.0646 0.0025956 1257.68286985471 111.83 0.24883 111.83 111.69 111.94 0 12 4 4 0 0 0 6.9172E-07 1 135980 98.312 91.731 1 2947300 1144 1569 1062 1075 1339 1339 AGTQIENIDEDFR 13 Unmodified _AGTQIENIDEDFR_ 0 0 0 O43707 O43707 O43707 ACTN4 Alpha-actinin-4 MULTI-MSMS 210214_Eclipse_Hela_QC 754.355163574219 2 754.354802 1506.69505 1.1117 0.00083862 -1.8948 -0.0014293 -0.78306 -0.00059071 754.352899695867 61.139 1.2432 61.139 60.099 61.342 0 48 24 5 0 0 0 1.6771E-09 1 65716 132.78 118.11 1 13789000 1145 329 1063 1076 1340 1340 AGTQIENIEEDFR 13 Unmodified _AGTQIENIEEDFR_ 0 0 0 P12814;P35609;Q08043 P12814 P12814 ACTN1;ACTN2;ACTN3 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3 MULTI-MSMS 210214_Eclipse_Hela_QC 761.362487792969 2 761.362627 1520.7107 0.99802 0.00075986 0.10155 7.7319E-05 1.0996 0.00083718 761.362587280632 69.445 0.54796 69.445 69.178 69.726 0 29 10 4 0 0 0 3.548E-13 1 77174 143.24 132.07 1 10511000 1146 853 1064 1077 1341 1341 AGTQIENIEEDFRDGLK 17 Unmodified _AGTQIENIEEDFRDGLK_ 0 0 1 P12814 P12814 P12814 ACTN1 Alpha-actinin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 645.987915039062 3 645.653321 1933.93813 0.64987 0.00041959 -0.0061108 -3.9454E-06 0.64376 0.00041565 645.987615642569 78.742 1.0446 78.742 78.219 79.264 0 63 20 5 0 0 0 3.0419E-05 1 89924 74.786 68.754 1 43536000 1147 853 1065 1078 1342 1342 AGTVVLDDVELR 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AGTVVLDDVELR_ 1 0 0 P25205 P25205 P25205 MCM3 DNA replication licensing factor MCM3 MULTI-MSMS 210214_Eclipse_Hela_QC 664.855834960938 2 664.856449 1327.69835 1.3191 0.000877 2.7316 0.0018161 4.0506 0.0026931 664.856224167448 103.62 1.293 103.62 102.84 104.13 0 80 25 6 0 0 0 0.00011316 1 124936 96.89 74.15 1 11514000 1148 1040 1066 1079 1343 1343 AGVAAPATQVAQVTLQSVQR 20 Unmodified _AGVAAPATQVAQVTLQSVQR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 998.556579589844 2 998.05272 1994.09089 1.0059 0.0010039 0.0080795 8.0638E-06 1.0139 0.001012 998.554151615852 78.065 0.59766 78.065 77.721 78.319 0 37 11 4 0 0 0 0.0024178 1 88968 53.403 48.019 1 12378000 1149 2158 1067 1080 1344 1344 AGVAPLQVK 9 Unmodified _AGVAPLQVK_ 0 0 0 P21333 P21333 P21333 FLNA Filamin-A MULTI-MSMS 210214_Eclipse_Hela_QC 441.773986816406 2 441.774003 881.533452 0.19124 8.4484E-05 0.054515 2.4083E-05 0.24575 0.00010857 441.773971731203 31.694 1.09 31.694 31.321 32.411 0 50 21 4 0 0 0 0.0084679 1 23645 56.27 38.977 1 43409000 1150 995 1068 1081 1345 1345 AGVEEVAASGSHLNGDLDPDDREEGAASTAEEAAK 35 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AGVEEVAASGSHLNGDLDPDDREEGAASTAEEAAK_ 1 0 1 P50579 P50579 P50579 METAP2 Methionine aminopeptidase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 1171.53125 3 1170.86282 3509.56662 1.4911 0.0017458 0.92686 0.0010852 2.4179 0.002831 1171.19806845654 74.331 0.54746 74.331 74.007 74.554 0 52 10 7 0 0 0 9.8306E-06 1 83861 49.942 42.472 1 24429000 1151 1420 1069 1082 1346 1346 AGVENGKPTHFTVYTK 16 Unmodified _AGVENGKPTHFTVYTK_ 0 0 1 O75369 O75369 O75369 FLNB Filamin-B MULTI-MSMS 210214_Eclipse_Hela_QC 583.971130371094 3 583.637054 1747.88933 -0.31285 -0.00018259 0.13345 7.7889E-05 -0.1794 -0.0001047 583.97138092035 25.388 0.34779 25.388 25.164 25.512 0 14 6 3 0 0 0 0.0040015 1 14779 48.729 30.626 1 17253000 1152 445 1070 1083 1347 1347 AGVIFPVGR 9 Unmodified _AGVIFPVGR_ 0 0 0 O75367;Q9P0M6 O75367;Q9P0M6 O75367 H2AFY;H2AFY2 Core histone macro-H2A.1;Core histone macro-H2A.2 MULTI-MSMS 210214_Eclipse_Hela_QC 458.273986816406 2 458.27417 914.533787 0.20544 9.4148E-05 0.02155 9.8757E-06 0.22699 0.00010402 458.274130504525 56.442 1.095 56.442 56.018 57.113 0 54 21 4 0 0 0 0.0023291 1 58794 76.134 18.671 1 49656000 1153 443;3787 1071 1084 1348 1348 AGVIGLTQTAAR 12 Unmodified _AGVIGLTQTAAR_ 0 0 0 Q92506 Q92506 Q92506 HSD17B8 Estradiol 17-beta-dehydrogenase 8 MULTI-MSMS 210214_Eclipse_Hela_QC 579.337036132812 2 579.335487 1156.65642 0.64231 0.00037211 -1.3472 -0.00078048 -0.7049 -0.00040837 579.335736351096 43.101 0.64799 43.101 42.895 43.543 0 26 12 3 0 0 0 0.035358 1 40141 35.511 20.36 1 2224900 1154 2876 1072 1085 1349 1349 AGVLAHLEEER 11 Unmodified _AGVLAHLEEER_ 0 0 0 P35579 P35579 P35579 MYH9 Myosin-9 MULTI-MSMS 210214_Eclipse_Hela_QC 408.55078125 3 408.55081 1222.6306 -0.14882 -6.0802E-05 0.47206 0.00019286 0.32324 0.00013206 408.550858271117 37.227 1.5786 37.227 36.912 38.491 0 61 31 3 0 0 0 0.008812 1 31552 34.75 24.745 1 25119000 1155 1191 1073 1086 1350 1350 AGVLAHLEEER 11 Unmodified _AGVLAHLEEER_ 0 0 0 P35579 P35579 P35579 MYH9 Myosin-9 MULTI-MSMS 210214_Eclipse_Hela_QC 612.323120117188 2 612.322576 1222.6306 0.25531 0.00015633 -0.092375 -5.6563E-05 0.16294 9.9771E-05 612.322575768986 37.425 1.327 37.425 36.718 38.045 0 58 26 3 0 0 0 0.016312 1 31631 45.598 33.372 1 24997000 1156 1191 1073 1086 1351 1351 AGVMALANLLQIQR 14 Unmodified _AGVMALANLLQIQR_ 0 0 0 Q9Y224 Q9Y224 Q9Y224 C14orf166 UPF0568 protein C14orf166 MULTI-MSMS 210214_Eclipse_Hela_QC 749.432495117188 2 749.432135 1496.84972 0.89754 0.00067265 -0.33847 -0.00025366 0.55908 0.00041899 749.933245100036 105.5 0.29907 105.5 105.38 105.67 0 17 5 4 0 0 0 5.6688E-14 1 127234 186.16 181.82 1 25395000 1157 3983 1074 1087 1352 1352 AGVNFSEFTGVWK 13 Unmodified _AGVNFSEFTGVWK_ 0 0 0 O75340 O75340 O75340 PDCD6 Programmed cell death protein 6 MULTI-MSMS 210214_Eclipse_Hela_QC 721.361877441406 2 721.359159 1440.70376 1.5256 0.0011005 0.19824 0.000143 1.7239 0.0012435 721.359212940183 91.683 0.89513 91.683 91.4 92.295 0 75 17 6 0 0 0 0.0065552 1 107883 48.785 29.691 1 29705000 1158 438 1075 1088 1353 1353 AGVNTVTTLVENK 13 Unmodified _AGVNTVTTLVENK_ 0 0 0 P62424 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 210214_Eclipse_Hela_QC 673.371032714844 2 673.369724 1344.72489 1.259 0.0008478 -0.46577 -0.00031363 0.79327 0.00053416 673.369675095449 53.516 0.94627 53.516 53.142 54.088 0 63 18 6 0 0 0 0.009741 1 54604 45.603 29.721 1 157460000 1159 1667 1076 1089 1354 1354 AGVNTVTTLVENKK 14 Unmodified _AGVNTVTTLVENKK_ 0 0 1 P62424 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-MSMS 210214_Eclipse_Hela_QC 491.947906494141 3 491.947229 1472.81986 0.17775 8.7442E-05 0.16494 8.1143E-05 0.34269 0.00016859 491.947298297297 39.685 0.92148 39.685 39.341 40.263 0 57 18 5 0 0 0 0.027868 1 35030 31.319 23.775 1 51017000 1160 1667 1077 1090 1355 1355 AGVNTVTTLVENKK 14 Unmodified _AGVNTVTTLVENKK_ 0 0 1 P62424 P62424 P62424 RPL7A 60S ribosomal protein L7a MULTI-SECPEP 210214_Eclipse_Hela_QC 737.368713378906 2 737.417205 1472.81986 0.54108 0.000399 0.26645 0.00019649 0.80753 0.00059549 737.91890544302 39.625 0.48922 39.625 39.426 39.915 0 22 9 3 0 0 0 0.0074651 1 35184 62.408 49.054 1 5875700 1161 1667 1077 1090 1356 1356 AGVSFSGHR 9 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AGVSFSGHR_ 1 0 0 Q16643 Q16643 Q16643 DBN1 Drebrin MULTI-MSMS 210214_Eclipse_Hela_QC 480.238555908203 2 480.238316 958.462078 0.20969 0.0001007 0.25463 0.00012228 0.46432 0.00022298 480.238337290156 30.395 0.69738 30.395 30.076 30.773 0 27 13 3 0 0 0 0.00029475 1 22065 95.531 65.957 1 12132000 1162 2242 1078 1091 1357 1357 AGVSQVLNR 9 Unmodified _AGVSQVLNR_ 0 0 0 P30876 P30876 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 MULTI-MSMS 210214_Eclipse_Hela_QC 472.270263671875 2 472.269616 942.524678 0.34497 0.00016292 0.57483 0.00027148 0.9198 0.00043439 472.269483788917 28.214 0.29807 28.214 28.09 28.388 0 9 5 2 0 0 0 0.011198 1 18933 52.786 25.299 1 3441200 1163 1137 1079 1092 1358 1358 AGVSVYGIVK 10 Unmodified _AGVSVYGIVK_ 0 0 0 Q96DG6 Q96DG6 Q96DG6 CMBL Carboxymethylenebutenolidase homolog MULTI-MSMS 210214_Eclipse_Hela_QC 496.792694091797 2 496.792392 991.570232 0.94868 0.00047129 0.44937 0.00022324 1.398 0.00069454 496.792561835477 53.232 0.69813 53.232 52.892 53.59 0 30 13 3 0 0 0 0.0048464 1 54269 58.981 37.681 1 10180000 1164 2999 1080 1093 1359 1359 AGVTCIVLPAENK 13 Unmodified _AGVTCIVLPAENK_ 0 0 0 P36776 P36776 P36776 LONP1 Lon protease homolog, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 686.870056152344 2 686.368669 1370.72279 0.87174 0.00059834 -0.015126 -1.0382E-05 0.85662 0.00058796 686.368477911038 59.146 0.94471 59.146 58.606 59.551 0 51 18 4 0 0 0 0.054291 1 62483 42.802 31.651 1 9829800 1165 1210 1081 1094 1360 1360 AGVVGPELHEQLLSAEK 17 Unmodified _AGVVGPELHEQLLSAEK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 592.988647460938 3 592.987864 1775.94176 1.2197 0.00072326 1.1811 0.00070038 2.4008 0.0014236 593.323558207316 56.719 1.0446 56.719 56.367 57.412 0 59 20 5 0 0 0 5.181E-05 2 59141 62.765 56.233 1 35535000 1166 2158 1082 1095 1361;1362 1362 AGVVTPGITEDQLWR 15 Unmodified _AGVVTPGITEDQLWR_ 0 0 0 Q9BWM7 Q9BWM7 Q9BWM7 SFXN3 Sideroflexin-3 MULTI-MSMS 210214_Eclipse_Hela_QC 821.434692382812 2 821.433387 1640.85222 1.1475 0.00094259 -0.2238 -0.00018384 0.92369 0.00075875 821.433292748487 80.677 0.74464 80.677 80.21 80.954 0 37 14 4 0 0 0 0.00017558 1 92704 89.548 72.522 1 10450000 1167 3333 1083 1096 1363 1363 AGWNAYIDNLMADGTCQDAAIVGYK 25 Acetyl (Protein N-term),Oxidation (M) _(Acetyl (Protein N-term))AGWNAYIDNLM(Oxidation (M))ADGTCQDAAIVGYK_ AGWNAYIDNLM(1)ADGTCQDAAIVGYK AGWNAYIDNLM(170)ADGTCQDAAIVGYK 1 1 0 CON__P02584;P07737 CON__P02584;P07737 P07737 PFN1 Profilin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 1388.62573242188 2 1388.12308 2774.23162 1.6116 0.0022372 0.29197 0.00040529 1.9036 0.0026424 1388.62409218087 108.73 0.34799 108.73 108.61 108.95 0 17 6 4 0 0 0 2.4121E-43 1 131659 171.46 160.98 1 23550000 + 1168 726;51 1084 1097 1364 1364 7 AGWNAYIDNLMADGTCQDAAIVGYK 25 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AGWNAYIDNLMADGTCQDAAIVGYK_ 1 0 0 CON__P02584;P07737 CON__P02584;P07737 P07737 PFN1 Profilin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 1380.62878417969 2 1380.12563 2758.2367 1.8737 0.002586 -0.7252 -0.0010009 1.1485 0.0015851 1380.62566102921 111.07 1.2451 111.07 110.6 111.84 0 64 24 4 0 0 0 1.8525E-121 1 134871 262.05 251 1 333020000 + 1169 726;51 1084 1098 1365 1365 AGYIIPLQGPGLTTTESR 18 Unmodified _AGYIIPLQGPGLTTTESR_ 0 0 0 P10253 P10253 P10253 GAA Lysosomal alpha-glucosidase;76 kDa lysosomal alpha-glucosidase;70 kDa lysosomal alpha-glucosidase MULTI-MSMS 210214_Eclipse_Hela_QC 938.007995605469 2 937.50454 1872.99453 1.5946 0.0014949 0.095748 8.9765E-05 1.6903 0.0015847 937.504338787336 85.761 0.74518 85.761 85.296 86.041 0 43 14 5 0 0 0 0.00018383 1 99754 90.614 78.345 1 9780900 1170 801 1085 1099 1366 1366 AGYITPVPGGVGPMTVAMLMK 21 Unmodified _AGYITPVPGGVGPMTVAMLMK_ 0 0 0 P13995 P13995 P13995 MTHFD2 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial;NAD-dependent methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase MULTI-MSMS 210214_Eclipse_Hela_QC 1046.0498046875 2 1045.54598 2089.07741 1.0968 0.0011468 2.9505 0.0030849 4.0473 0.0042317 1045.55077489553 107.07 0.64691 107.07 106.81 107.46 0 22 12 3 0 0 0 0.0024732 1 129630 37.594 29.683 1 14837000 1171 873 1086 1100 1367 1367 AGYKPVAIQTYPILGEK 17 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AGYKPVAIQTYPILGEK_ 1 0 1 Q8TED0 Q8TED0 Q8TED0 UTP15 U3 small nucleolar RNA-associated protein 15 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 946.025085449219 2 945.522202 1889.02985 0.80365 0.00075987 0.28646 0.00027086 1.0901 0.0010307 945.522391932867 86.502 0.59682 86.502 86.19 86.787 0 33 11 4 0 0 0 0.0026561 1 100792 41.052 35.446 1 8305400 1172 2809 1087 1101 1368 1368 AGYPQYVSEILEK 13 Unmodified _AGYPQYVSEILEK_ 0 0 0 P42704 P42704 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 748.884643554688 2 748.885207 1495.75586 1.432 0.0010724 -0.38275 -0.00028664 1.0492 0.00078576 748.885279806615 82.046 1.0426 82.046 81.402 82.444 0 67 20 4 0 0 0 0.00025343 2 95112 73.781 64.823 1 13830000 1173 1278 1088 1102 1369;1370 1370 AGYQDMPEYENFK 13 Unmodified _AGYQDMPEYENFK_ 0 0 0 Q15437 Q15437 Q15437 SEC23B Protein transport protein Sec23B MULTI-MSMS 210214_Eclipse_Hela_QC 796.342407226562 2 796.340306 1590.66606 1.5558 0.0012389 -0.27503 -0.00021902 1.2808 0.0010199 796.339956475495 59.626 0.54671 59.626 59.304 59.85 0 17 10 2 0 0 0 0.0042467 1 63310 51.092 49.681 1 4430000 1174 2190 1089 1103 1371 1371 AGYVDFENGQWATDDIPDDLNSIR 24 Unmodified _AGYVDFENGQWATDDIPDDLNSIR_ 0 0 0 P55265 P55265 P55265 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 210214_Eclipse_Hela_QC 1356.62170410156 2 1356.11463 2710.2147 1.2897 0.001749 1.4949 0.0020272 2.7846 0.0037762 1356.61792715316 105.9 0.19956 105.9 105.77 105.97 0 12 3 5 0 0 0 1.6111E-06 1 127839 99.451 81.75 1 17605000 1175 1540 1090 1104 1372 1372 AGYYFDGISR 10 Unmodified _AGYYFDGISR_ 0 0 0 CON__ENSEMBL:ENSBTAP00000016046 CON__ENSEMBL:ENSBTAP00000016046 CON__ENSEMBL:ENSBTAP00000016046 MSMS 210214_Eclipse_Hela_QC 574.773132324219 2 574.772188 1147.52982 NaN NaN NaN NaN NaN NaN NaN 57.066 1 57.066 56.566 57.566 0 0 0 0 0.029197 1 59797 53.327 37.124 1 + 1176 35 1091 1105 1373 1373 AHAAVWNAQEAQADFAK 17 Unmodified _AHAAVWNAQEAQADFAK_ 0 0 0 O00170 O00170 O00170 AIP AH receptor-interacting protein MULTI-MSMS 210214_Eclipse_Hela_QC 610.298889160156 3 609.963942 1826.87 0.98902 0.00060327 0.60622 0.00036977 1.5952 0.00097304 609.964112789685 47.299 0.74607 47.299 47.075 47.821 0 50 14 4 0 0 0 2.221E-06 1 46036 81.992 79.173 1 16590000 1177 133 1092 1106 1374 1374 AHAFAVQQK 9 Unmodified _AHAFAVQQK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 500.273223876953 2 500.272158 998.529764 1.1787 0.00058966 0.32077 0.00016047 1.4995 0.00075013 500.272280028257 17.382 1.3231 17.382 16.39 17.714 0 332 144 3 0 0 0 0.020596 1 3462 48.504 44.932 1 2470800 1178 2158 1093 1107 1375 1375 AHAMAQVDAWK 11 Unmodified _AHAMAQVDAWK_ 0 0 0 Q86TX2;P49753 Q86TX2 Q86TX2 ACOT1;ACOT2 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 614.80517578125 2 614.30059 1226.58663 0.1411 8.6679E-05 0.35675 0.00021915 0.49785 0.00030583 614.300250286312 29.057 0.73507 29.057 28.695 29.43 0 20 14 2 0 0 0 0.019857 1 20052 43.272 26.176 1 5755800 1179 2572 1094 1108 1376 1376 AHASPFSGALTPSAPPGPEMNR 22 Unmodified _AHASPFSGALTPSAPPGPEMNR_ 0 0 0 O15027 O15027 O15027 SEC16A Protein transport protein Sec16A MULTI-MSMS 210214_Eclipse_Hela_QC 731.691101074219 3 731.356622 2191.04804 0.8851 0.00064733 1.4546 0.0010638 2.3397 0.0017112 731.358528188504 60.005 1.045 60.005 59.304 60.349 0 52 20 5 0 0 0 0.00051364 1 63834 45.88 37.489 1 6332800 1180 232 1095 1109 1377 1377 AHATLLGLANMETR 14 Unmodified _AHATLLGLANMETR_ 0 0 0 Q8WUM0 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 MSMS 210214_Eclipse_Hela_QC 499.933441162109 3 499.932925 1496.77695 NaN NaN NaN NaN NaN NaN NaN 59.243 1 59.243 58.743 59.743 0 0 0 0 0.00067601 1 62864 70.889 63.164 1 1181 2828 1096 1110 1378 1378 AHAWPSPYK 9 Unmodified _AHAWPSPYK_ 0 0 0 Q8NFJ5 Q8NFJ5 Q8NFJ5 GPRC5A Retinoic acid-induced protein 3 MULTI-SECPEP 210214_Eclipse_Hela_QC 528.795776367188 2 528.766709 1055.51886 0.18783 9.9319E-05 -0.63005 -0.00033315 -0.44221 -0.00023383 528.767056362253 25.866 0.74652 25.866 25.611 26.358 0 24 14 2 0 0 0 0.00021312 1 15688 142.64 127.2 1 27130000 1182 2768 1097 1111 1379 1379 AHCVTLVQLSISCDHLIDK 19 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AHCVTLVQLSISCDHLIDK_ 1 0 0 Q99829 Q99829 Q99829 CPNE1 Copine-1 MULTI-MSMS 210214_Eclipse_Hela_QC 751.380737304688 3 751.045167 2250.11367 1.2422 0.00093295 -0.16266 -0.00012217 1.0795 0.00081078 751.045158980372 87.06 0.69576 87.06 86.787 87.483 0 46 13 6 0 0 0 0.00048166 1 101672 50.358 45.741 1 12996000 1183 3199 1098 1112 1380 1380 AHDGAEVCSAIFSK 14 Unmodified _AHDGAEVCSAIFSK_ 0 0 0 Q05048 Q05048 Q05048 CSTF1 Cleavage stimulation factor subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 497.902099609375 3 497.901402 1490.68238 0.066172 3.2947E-05 -0.00061103 -3.0423E-07 0.065561 3.2643E-05 497.901351793021 40.912 1.1435 40.912 40.611 41.755 0 37 22 3 0 0 0 0.00055062 1 36886 54.09 48.913 1 8834800 1184 1853 1099 1113 1381 1381 AHDGAEVCSAIFSK 14 Unmodified _AHDGAEVCSAIFSK_ 0 0 0 Q05048 Q05048 Q05048 CSTF1 Cleavage stimulation factor subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 746.347412109375 2 746.348465 1490.68238 0.67731 0.00050551 -0.012465 -9.3031E-06 0.66484 0.0004962 746.348233707132 40.907 0.44794 40.907 40.661 41.109 0 12 8 2 0 0 0 0.00026029 1 36970 87.184 73.415 1 2560600 1185 1853 1099 1113 1382 1382 AHDGGIYAISWSPDSTHLLSASGDK 25 Unmodified _AHDGGIYAISWSPDSTHLLSASGDK_ 0 0 0 O75083 O75083 O75083 WDR1 WD repeat-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 647.312622070312 4 647.062125 2584.21939 1.3084 0.00084661 -0.04794 -3.102E-05 1.2605 0.00081559 647.312864610737 77.541 0.89553 77.541 77.075 77.97 0 70 17 6 0 0 0 3.9791E-18 1 88187 116.74 109.55 1 33400000 1186 417 1100 1114 1383 1383 AHDGGIYAISWSPDSTHLLSASGDK 25 Unmodified _AHDGGIYAISWSPDSTHLLSASGDK_ 0 0 0 O75083 O75083 O75083 WDR1 WD repeat-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 862.748718261719 3 862.413741 2584.21939 1.6682 0.0014387 0.52245 0.00045056 2.1907 0.0018893 862.74854633835 77.5 0.79587 77.5 77.075 77.871 0 50 15 5 0 0 0 1.8809E-13 1 88203 81.373 78.491 1 10920000 1187 417 1100 1114 1384 1384 AHDGSVFTLCQMR 13 Unmodified _AHDGSVFTLCQMR_ 0 0 0 Q9HC35 Q9HC35 Q9HC35 EML4 Echinoderm microtubule-associated protein-like 4 MULTI-MSMS 210214_Eclipse_Hela_QC 507.9033203125 3 507.902749 1520.68642 0.83865 0.00042595 -0.49943 -0.00025366 0.33923 0.00017229 507.902716784677 50.148 0.69767 50.148 49.731 50.429 0 33 13 5 0 0 0 0.0042959 1 50156 33.204 23.361 1 4757900 1188 3553 1101 1115 1385 1385 AHDPSVRPSVDEILK 15 Unmodified _AHDPSVRPSVDEILK_ 0 0 1 Q8NB16 Q8NB16 Q8NB16 MLKL Mixed lineage kinase domain-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 554.965637207031 3 554.965171 1661.87368 0.42263 0.00023455 -0.060303 -3.3466E-05 0.36233 0.00020108 554.965089846763 43.309 0.64796 43.309 42.945 43.593 0 39 12 4 0 0 0 0.00090048 2 40459 46.408 34.493 1 17410000 1189 2721 1102 1116 1386;1387 1387 AHEILPNLVCCSAK 14 Unmodified _AHEILPNLVCCSAK_ 0 0 0 P50990 P50990 P50990 CCT8 T-complex protein 1 subunit theta MULTI-MSMS 210214_Eclipse_Hela_QC 538.271789550781 3 537.937571 1610.79088 0.55296 0.00029746 -0.36412 -0.00019588 0.18883 0.00010158 537.937635866419 52.121 1.1454 52.121 51.548 52.693 0 66 22 5 0 0 0 3.5384E-05 1 52563 73.156 66.428 1 71271000 1190 1428 1103 1117 1388 1388 AHEILPNLVCCSAK 14 Unmodified _AHEILPNLVCCSAK_ 0 0 0 P50990 P50990 P50990 CCT8 T-complex protein 1 subunit theta MULTI-MSMS 210214_Eclipse_Hela_QC 806.904968261719 2 806.402718 1610.79088 0.90132 0.00072682 0.10245 8.2612E-05 1.0038 0.00080944 806.40305589597 52.114 0.59746 52.114 51.797 52.394 0 33 11 4 0 0 0 1.5376E-06 1 52658 107.85 93.428 1 11094000 1191 1428 1103 1117 1389 1389 AHELIEAEGIEDIEK 15 Unmodified _AHELIEAEGIEDIEK_ 0 0 0 Q9NWH9 Q9NWH9 Q9NWH9 SLTM SAFB-like transcription modulator MULTI-MSMS 210214_Eclipse_Hela_QC 565.953308105469 3 565.952708 1694.8363 1.4495 0.00082036 -0.146 -8.2631E-05 1.3035 0.00073773 565.952711034799 60.702 0.64627 60.702 60.349 60.995 0 19 12 2 0 0 0 0.0032989 1 64957 28.549 20.834 1 4519200 1192 3702 1104 1118 1390 1390 AHEPTYFTVDCAEAGQGDVSIGIK 24 Unmodified _AHEPTYFTVDCAEAGQGDVSIGIK_ 0 0 0 P21333 P21333 P21333 FLNA Filamin-A MULTI-MSMS 210214_Eclipse_Hela_QC 855.740478515625 3 855.735716 2564.18532 0.99019 0.00084734 0.11003 9.4153E-05 1.1002 0.00094149 856.070299281916 73.81 2.57 73.81 73.459 76.029 0 181 51 6 0 0 0 5.9001E-14 4 83093 116.45 112.65 1 54787000 1193 995 1105 1119 1391;1392;1393;1394 1391 AHEQALAELTK 11 Unmodified _AHEQALAELTK_ 0 0 0 Q15477 Q15477 Q15477 SKIV2L Helicase SKI2W MULTI-MSMS 210214_Eclipse_Hela_QC 605.822570800781 2 605.824952 1209.63535 0.38595 0.00023382 -1.3414 -0.00081267 -0.95548 -0.00057886 605.823146909416 27.577 0.44292 27.577 27.353 27.796 0 10 8 2 0 0 0 0.00058562 1 17934 78.136 42.781 1 4854800 1194 2192 1106 1120 1395 1395 AHEVGAQGGPPVAQVEQDLPISR 23 Unmodified _AHEVGAQGGPPVAQVEQDLPISR_ 0 0 0 Q14676 Q14676 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 785.742309570312 3 785.7399 2354.19787 1.3693 0.0010759 0.24322 0.00019111 1.6125 0.001267 785.739975850448 67.86 0.59603 67.86 67.561 68.157 0 23 11 3 0 0 0 0.018413 1 74958 26.84 19.393 1 2631200 1195 2098 1107 1121 1396 1396 AHFGLPSVEAEDK 13 Unmodified _AHFGLPSVEAEDK_ 0 0 0 Q9BXS5 Q9BXS5 Q9BXS5 AP1M1 AP-1 complex subunit mu-1 MULTI-MSMS 210214_Eclipse_Hela_QC 700.346557617188 2 700.346249 1398.67794 1.3407 0.00093897 -0.10316 -7.2246E-05 1.2376 0.00086672 700.346331498025 46.124 0.64706 46.124 45.781 46.428 0 31 12 3 0 0 0 0.00020553 1 44239 78.655 72.932 1 10535000 1196 3344 1108 1122 1397 1397 AHFGLPSVEAEDK 13 Unmodified _AHFGLPSVEAEDK_ 0 0 0 Q9BXS5 Q9BXS5 Q9BXS5 AP1M1 AP-1 complex subunit mu-1 MULTI-MSMS 210214_Eclipse_Hela_QC 467.233642578125 3 467.233258 1398.67794 0.89035 0.000416 -0.23201 -0.0001084 0.65834 0.0003076 467.232950753054 46.093 0.54749 46.093 45.831 46.379 0 18 10 2 0 0 0 0.00012017 1 44350 60.628 51.416 1 6559300 1197 3344 1108 1122 1398 1398 AHFNLDESGVLSLDR 15 Unmodified _AHFNLDESGVLSLDR_ 0 0 0 Q9Y4L1 Q9Y4L1 Q9Y4L1 HYOU1 Hypoxia up-regulated protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 558.281799316406 3 558.281159 1671.82165 0.86741 0.00048426 0.179 9.9931E-05 1.0464 0.00058419 558.281424398863 71.978 0.99495 71.978 71.617 72.612 0 44 19 3 0 0 0 1.8536E-07 2 80789 86.497 78.112 1 11213000 1198 4089 1109 1123 1399;1400 1400 AHFPLDVQWNDLDYMDSR 18 Unmodified _AHFPLDVQWNDLDYMDSR_ 0 0 0 P10253 P10253 P10253 GAA Lysosomal alpha-glucosidase;76 kDa lysosomal alpha-glucosidase;70 kDa lysosomal alpha-glucosidase MULTI-MSMS 210214_Eclipse_Hela_QC 741.673156738281 3 741.337227 2220.98985 1.8285 0.0013555 0.076935 5.7035E-05 1.9054 0.0014126 741.671875737276 97.537 0.74576 97.537 97.218 97.964 0 37 14 3 0 0 0 1.859E-12 1 116065 101.15 97.958 1 8647200 1199 801 1110 1124 1401 1401 AHFQNFPNGVTDFIK 15 Unmodified _AHFQNFPNGVTDFIK_ 0 0 0 Q92973 Q92973 Q92973 TNPO1 Transportin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 579.293823242188 3 578.958128 1733.85255 1.0681 0.00061837 0.10936 6.3318E-05 1.1774 0.00068169 578.958208206018 73.634 1.2949 73.634 73.11 74.405 0 73 25 4 0 0 0 2.8735E-07 1 82685 92.457 79.624 1 34027000 1200 2927 1111 1125 1402 1402 AHFTIWDK 8 Unmodified _AHFTIWDK_ 0 0 0 Q9NYK5 Q9NYK5 Q9NYK5 MRPL39 39S ribosomal protein L39, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 509.261047363281 2 509.261259 1016.50797 0.14957 7.6168E-05 0.34688 0.00017665 0.49645 0.00025282 509.261428877329 40.407 1.1442 40.407 39.915 41.059 0 43 22 3 0 0 0 0.0020032 1 36176 106.36 92.979 1 7471800 1201 3744 1112 1126 1403 1403 AHGFTFTR 8 Unmodified _AHGFTFTR_ 0 0 0 P08559 P08559 P08559 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 468.738250732422 2 468.737951 935.46135 -0.21698 -0.00010171 -0.15794 -7.4035E-05 -0.37492 -0.00017574 468.737846237017 25.089 0.54729 25.089 24.865 25.412 0 18 10 2 0 0 0 0.00045785 1 14403 125.25 112.26 1 44946000 1202 749 1113 1127 1404 1404 AHGGYSVFAGVGER 14 Unmodified _AHGGYSVFAGVGER_ 0 0 0 P06576 P06576 P06576 ATP5B ATP synthase subunit beta, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 704.3466796875 2 703.844207 1405.67386 0.67666 0.00047626 0.014456 1.0175E-05 0.69111 0.00048644 704.34561492513 40.672 0.94523 40.672 40.263 41.208 0 63 18 5 0 0 0 6.5969E-07 2 36654 113.69 104 1 36252000 1203 699 1114 1128 1405;1406 1406 AHGLEVEPSALEQGFR 16 Unmodified _AHGLEVEPSALEQGFR_ 0 0 0 Q9BSH5 Q9BSH5 Q9BSH5 HDHD3 Haloacid dehalogenase-like hydrolase domain-containing protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 580.963928222656 3 580.628559 1738.86385 0.81412 0.0004727 -0.25408 -0.00014753 0.56003 0.00032517 580.962854637944 63.847 0.49768 63.847 63.573 64.071 0 15 9 2 0 0 0 0.027223 1 69312 18.926 11.335 1 2613700 1204 3257 1115 1129 1407 1407 AHGLLAEENR 10 Unmodified _AHGLLAEENR_ 0 0 0 Q14980 Q14980 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 555.288696289062 2 555.288537 1108.56252 -0.032407 -1.7995E-05 -0.033163 -1.8415E-05 -0.065569 -3.641E-05 555.288499059104 21.186 0.34902 21.186 21.011 21.36 0 14 6 3 0 0 0 0.00064199 1 8872 83.948 64.853 1 17592000 1205 2122 1116 1130 1408 1408 AHGPGLEGGLVGK 13 Unmodified _AHGPGLEGGLVGK_ 0 0 0 O75369 O75369 O75369 FLNB Filamin-B MULTI-MSMS 210214_Eclipse_Hela_QC 596.328491210938 2 596.327662 1190.64077 0.65584 0.00039109 0.20888 0.00012456 0.86471 0.00051565 596.327865462114 27.682 0.9353 27.682 27.452 28.388 0 37 18 4 0 0 0 4.2311E-13 1 18046 141.88 125.21 1 33877000 1206 445 1117 1131 1409 1409 AHGPGLEGGLVGK 13 Unmodified _AHGPGLEGGLVGK_ 0 0 0 O75369 O75369 O75369 FLNB Filamin-B MULTI-MSMS 210214_Eclipse_Hela_QC 397.887725830078 3 397.887533 1190.64077 -0.0045824 -1.8233E-06 -0.19475 -7.7491E-05 -0.19934 -7.9314E-05 397.887419206387 27.676 0.63683 27.676 27.403 28.04 0 31 12 4 0 0 0 0.00013038 1 18052 49.28 28.993 1 32900000 1207 445 1117 1131 1410 1410 AHGPGLEGGLVGKPAEFTIDTK 22 Unmodified _AHGPGLEGGLVGKPAEFTIDTK_ 0 0 1 O75369 O75369 O75369 FLNB Filamin-B MULTI-MSMS 210214_Eclipse_Hela_QC 549.543212890625 4 549.293022 2193.14298 0.86855 0.00047709 -0.046304 -2.5435E-05 0.82224 0.00045165 549.543700338985 59.595 0.84492 59.595 59.254 60.099 0 57 16 5 0 0 0 1.214E-06 1 63143 81.665 73.171 1 34468000 1208 445 1118 1132 1411 1411 AHGPGLEGGLVGKPAEFTIDTK 22 Unmodified _AHGPGLEGGLVGKPAEFTIDTK_ 0 0 1 O75369 O75369 O75369 FLNB Filamin-B MULTI-MSMS 210214_Eclipse_Hela_QC 732.390563964844 3 732.054937 2193.14298 1.2913 0.00094529 0.33101 0.00024232 1.6223 0.0011876 732.389582694172 59.602 0.64616 59.602 59.304 59.95 0 33 12 4 0 0 0 0.00010534 1 63288 63.69 48.6 1 9301000 1209 445 1118 1132 1412 1412 AHGSSILACAPLYSWR 16 Unmodified _AHGSSILACAPLYSWR_ 0 0 0 P08648 P08648 P08648 ITGA5 Integrin alpha-5;Integrin alpha-5 heavy chain;Integrin alpha-5 light chain MULTI-MSMS 210214_Eclipse_Hela_QC 597.300476074219 3 596.966518 1787.87772 1.4437 0.00086184 -1.3968 -0.00083384 0.046908 2.8003E-05 597.299046826309 73.031 0.54803 73.031 72.712 73.26 0 31 10 4 0 0 0 0.0011919 1 82138 49.595 33.776 1 3479100 1210 755 1119 1133 1413 1413 AHGVSSYDTVISR 13 Unmodified _AHGVSSYDTVISR_ 0 0 0 P01130 P01130 P01130 LDLR Low-density lipoprotein receptor MULTI-MSMS 210214_Eclipse_Hela_QC 696.349731445312 2 696.349323 1390.68409 1.0046 0.00069956 -0.2789 -0.00019421 0.72572 0.00050535 696.348988186787 30.516 0.34853 30.516 30.275 30.623 0 10 6 2 0 0 0 0.011035 1 22177 44.309 15.911 1 2996100 1211 637 1120 1134 1414 1414 AHIAFKPTVAQQR 13 Unmodified _AHIAFKPTVAQQR_ 0 0 1 CON__Q9TRI1 CON__Q9TRI1 CON__Q9TRI1 MULTI-MSMS 210214_Eclipse_Hela_QC 733.916442871094 2 733.914967 1465.81538 0.29463 0.00021623 0.10605 7.783E-05 0.40068 0.00029406 733.914874799821 24.024 0.41983 24.024 23.849 24.269 0 21 8 3 0 0 0 1.8999E-36 1 12841 209.73 203.81 1 58050000 + 1212 114 1121 1135 1415 1415 AHIAFKPTVAQQR 13 Unmodified _AHIAFKPTVAQQR_ 0 0 1 CON__Q9TRI1 CON__Q9TRI1 CON__Q9TRI1 MULTI-MSMS 210214_Eclipse_Hela_QC 489.612548828125 3 489.612404 1465.81538 -0.12074 -5.9115E-05 0.038532 1.8866E-05 -0.082207 -4.0249E-05 489.612425752003 24.024 0.56962 24.024 23.849 24.419 0 37 11 4 0 0 0 4.2329E-58 1 12870 191.29 184.25 1 203830000 + 1213 114 1121 1135 1416 1416 AHIANPSGASTECFVTDNADGTYQVEYTPFEK 32 Unmodified _AHIANPSGASTECFVTDNADGTYQVEYTPFEK_ 0 0 0 O75369 O75369 O75369 FLNB Filamin-B MULTI-MSMS 210214_Eclipse_Hela_QC 1174.19604492188 3 1173.85969 3518.55724 0.68344 0.00080227 0.015199 1.7841E-05 0.69864 0.00082011 1174.19401710958 79.694 1.243 79.694 79.314 80.557 0 123 24 8 0 0 0 5.1313E-20 2 91258 111.24 110.71 1 158730000 1214 445 1122 1136 1417;1418 1417 AHIAQLCEK 9 Unmodified _AHIAQLCEK_ 0 0 0 Q00610;P53675 Q00610;P53675 Q00610 CLTC;CLTCL1 Clathrin heavy chain 1;Clathrin heavy chain 2 MULTI-MSMS 210214_Eclipse_Hela_QC 535.277038574219 2 535.276583 1068.53861 0.34181 0.00018296 -0.16126 -8.6319E-05 0.18055 9.6644E-05 535.276509893974 20.241 0.69678 20.241 20.066 20.762 0 39 13 4 0 0 0 8.7103E-16 1 7376 189.82 159.64 1 103610000 1215 1802;1503 1123 1137 1419 1419 AHILACAPSNSGADLLCQR 19 Unmodified _AHILACAPSNSGADLLCQR_ 0 0 0 Q9HCE1 Q9HCE1 Q9HCE1 MOV10 Putative helicase MOV-10 MULTI-MSMS 210214_Eclipse_Hela_QC 685.669189453125 3 685.335052 2052.98333 0.86018 0.00058951 -0.52351 -0.00035878 0.33667 0.00023073 685.669480259101 55.098 0.49745 55.098 54.824 55.322 0 24 9 4 0 0 0 3.2516E-13 2 57050 96.666 91.687 1 10376000 1216 3558 1124 1138 1420;1421 1421 AHINLVR 7 Unmodified _AHINLVR_ 0 0 0 Q5JTH9 Q5JTH9 Q5JTH9 RRP12 RRP12-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 411.7509765625 2 411.750862 821.487171 -0.53019 -0.00021831 1.0847 0.00044661 0.55447 0.0002283 411.750928782167 21.869 0.5475 21.869 21.559 22.107 0 20 10 3 0 0 0 0.010025 1 9807 79.833 27.559 1 16230000 1217 2329 1125 1139 1422 1422 AHIVFDFHQAADGIQEQQR 19 Unmodified _AHIVFDFHQAADGIQEQQR_ 0 0 0 P30520 P30520 P30520 ADSS Adenylosuccinate synthetase isozyme 2 MULTI-MSMS 210214_Eclipse_Hela_QC 553.525512695312 4 553.273892 2209.06646 0.50927 0.00028177 0.065927 3.6476E-05 0.5752 0.00031824 553.524635992037 59.406 1.2936 59.406 58.606 59.9 0 54 25 4 0 0 0 0.0071427 1 62955 24.594 18.158 1 12950000 1218 1127 1126 1140 1423 1423 AHLALEEDLNSEFR 14 Unmodified _AHLALEEDLNSEFR_ 0 0 0 P46100 P46100 P46100 ATRX Transcriptional regulator ATRX MULTI-MSMS 210214_Eclipse_Hela_QC 548.605895996094 3 548.605643 1642.7951 0.57049 0.00031297 0.08403 4.61E-05 0.65452 0.00035907 548.60556815286 64.854 0.54764 64.854 64.556 65.104 0 16 10 2 0 0 0 0.0002142 1 70735 48.467 43.918 1 2715600 1219 1304 1127 1141 1424 1424 AHLGTALK 8 Unmodified _AHLGTALK_ 0 0 0 P62266 P62266 P62266 RPS23 40S ribosomal protein S23 MULTI-MSMS 210214_Eclipse_Hela_QC 405.74560546875 2 405.745245 809.475937 -0.081804 -3.3192E-05 -0.21459 -8.7068E-05 -0.29639 -0.00012026 405.745321964362 19.045 1.3808 19.045 18.635 20.016 0 52 27 4 0 0 0 0.002029 1 5655 106.14 13.822 1 238160000 1220 1651 1128 1142 1425 1425 AHLLADMAHISGLVAAK 17 Unmodified _AHLLADMAHISGLVAAK_ 0 0 0 P34897 P34897 P34897 SHMT2 Serine hydroxymethyltransferase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 573.318664550781 3 573.31878 1716.93451 1.0629 0.00060937 0.75375 0.00043214 1.8166 0.0010415 573.319883798936 73.63 1.0984 73.63 73.11 74.209 0 69 21 5 0 0 0 0.00011419 1 82747 66.289 50.697 1 25252000 1221 1172 1129 1143 1426 1426 AHLMEIQVNGGTVAEK 16 Oxidation (M) _AHLM(Oxidation (M))EIQVNGGTVAEK_ AHLM(1)EIQVNGGTVAEK AHLM(52)EIQVNGGTVAEK 0 1 0 P39023 P39023 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 210214_Eclipse_Hela_QC 571.960388183594 3 571.62605 1711.85632 0.47029 0.00026883 -0.37144 -0.00021232 0.098852 5.6506E-05 571.960355558639 34.691 0.53363 34.691 34.411 34.945 0 33 11 4 0 0 0 0.00070466 1 27951 51.888 41.831 1 12805000 1222 1232 1130 1144 1427 1427 326 AHLMEIQVNGGTVAEK 16 Oxidation (M) _AHLM(Oxidation (M))EIQVNGGTVAEK_ AHLM(1)EIQVNGGTVAEK AHLM(50)EIQVNGGTVAEK 0 1 0 P39023 P39023 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 210214_Eclipse_Hela_QC 571.626647949219 3 571.62605 1711.85632 0.91827 0.00052491 0.68443 0.00039124 1.6027 0.00091615 571.626449902741 47.504 0.94472 47.504 46.877 47.821 0 43 18 3 0 0 0 0.0010631 1 46243 50.376 39.909 1 8470000 1223 1232 1130 1144 1428 1428 326 AHLMEIQVNGGTVAEK 16 Unmodified _AHLMEIQVNGGTVAEK_ 0 0 0 P39023 P39023 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 210214_Eclipse_Hela_QC 848.939636230469 2 848.937979 1695.8614 1.317 0.001118 0.10214 8.6709E-05 1.4191 0.0012047 848.938214681146 47.528 0.59681 47.528 47.175 47.771 0 38 11 4 0 0 0 2.0134E-07 1 46147 134.08 119.39 1 12635000 1224 1232 1130 1145 1429 1429 AHLMEIQVNGGTVAEK 16 Unmodified _AHLMEIQVNGGTVAEK_ 0 0 0 P39023 P39023 P39023 RPL3 60S ribosomal protein L3 MULTI-MSMS 210214_Eclipse_Hela_QC 566.295043945312 3 566.294411 1695.8614 0.85275 0.00048291 -0.23891 -0.00013529 0.61384 0.00034762 566.294437258067 47.544 1.6807 47.544 46.677 48.358 0 94 33 4 0 0 0 3.4271E-12 2 46232 132.44 119.32 1 167880000 1225 1232 1130 1145 1430;1431 1430 AHLQGPAGASVAGPQTSEAFAITVR 25 Unmodified _AHLQGPAGASVAGPQTSEAFAITVR_ 0 0 0 Q6UVK1 Q6UVK1 Q6UVK1 CSPG4 Chondroitin sulfate proteoglycan 4 MULTI-MSMS 210214_Eclipse_Hela_QC 813.428955078125 3 812.759183 2435.25572 1.2964 0.0010537 -0.10554 -8.5779E-05 1.1909 0.00096788 813.093370562256 68.456 0.54691 68.456 68.157 68.704 0 30 10 4 0 0 0 2.6336E-05 1 75638 63.63 60.416 1 8753100 1226 2476 1131 1146 1432 1432 AHLSENELEALEK 13 Unmodified _AHLSENELEALEK_ 0 0 0 P98175 P98175 P98175 RBM10 RNA-binding protein 10 MULTI-MSMS 210214_Eclipse_Hela_QC 741.877685546875 2 741.87537 1481.73619 1.0563 0.00078366 0.10774 7.9932E-05 1.1641 0.00086359 741.875644100936 47.053 0.64684 47.053 46.727 47.374 0 32 12 4 0 0 0 8.0992E-06 1 45569 103.91 78.524 1 10941000 1227 1789 1132 1147 1433 1433 AHLSENELEALEK 13 Unmodified _AHLSENELEALEK_ 0 0 0 P98175 P98175 P98175 RBM10 RNA-binding protein 10 MULTI-MSMS 210214_Eclipse_Hela_QC 494.919647216797 3 494.919339 1481.73619 0.64225 0.00031786 2.5677 0.0012708 3.2099 0.0015886 494.920750474859 47.05 0.84563 47.05 46.628 47.473 0 26 16 2 0 0 0 0.03625 1 45770 17.86 4.9823 1 7031200 1228 1789 1132 1147 1434 1434 AHLTFPK 7 Unmodified _AHLTFPK_ 0 0 0 P62253 P62253 P62253 UBE2G1 Ubiquitin-conjugating enzyme E2 G1;Ubiquitin-conjugating enzyme E2 G1, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 407.234527587891 2 407.234513 812.454474 -0.33234 -0.00013534 0.55415 0.00022567 0.22181 9.0329E-05 407.234748473271 24.578 0.29832 24.578 24.369 24.667 0 7 5 2 0 0 0 0.024697 1 13710 60.39 31.818 1 4581400 1229 1647 1133 1148 1435 1435 AHLTNQYMQR 10 Unmodified _AHLTNQYMQR_ 0 0 0 Q13310 Q13310 Q13310 PABPC4 Polyadenylate-binding protein 4 MULTI-MSMS 210214_Eclipse_Hela_QC 631.309265136719 2 631.308946 1260.60334 0.59978 0.00037864 1.6205 0.001023 2.2203 0.0014017 631.310406011384 21.684 0.94597 21.684 21.161 22.107 0 47 18 4 0 0 0 4.082E-34 1 9445 220.71 174.38 1 52882000 1230 1970 1134 1149 1436 1436 AHLVAVFNEYQR 12 Unmodified _AHLVAVFNEYQR_ 0 0 0 P50995 P50995 P50995 ANXA11 Annexin A11 MULTI-MSMS 210214_Eclipse_Hela_QC 482.921142578125 3 482.921126 1445.74155 0.43181 0.00020853 0.74257 0.0003586 1.1744 0.00056713 482.921397669694 49.336 0.94277 49.336 49.088 50.03 0 41 18 4 0 0 0 9.7382E-12 1 48802 117.67 96.042 1 9637200 1231 1430 1135 1150 1437 1437 AHLVAVFNEYQR 12 Unmodified _AHLVAVFNEYQR_ 0 0 0 P50995 P50995 P50995 ANXA11 Annexin A11 MULTI-MSMS 210214_Eclipse_Hela_QC 723.879638671875 2 723.87805 1445.74155 0.83743 0.00060619 1.501 0.0010865 2.3384 0.0016927 723.878855807095 49.398 0.34886 49.398 49.137 49.486 0 8 6 2 0 0 0 0.024242 1 49005 37.191 22.04 1 1173400 1232 1430 1135 1150 1438 1438 AHMNSVLMGMK 11 Unmodified _AHMNSVLMGMK_ 0 0 0 Q9Y3E7 Q9Y3E7 Q9Y3E7 CHMP3 Charged multivesicular body protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 609.793029785156 2 609.793229 1217.5719 0.23769 0.00014494 0.14256 8.6932E-05 0.38025 0.00023187 609.793201200941 35.615 0.63239 35.615 35.293 35.925 0 22 12 2 0 0 0 0.00055616 1 29274 78.934 66.307 1 3335800 1233 4069 1136 1151 1439 1439 AHNVPVLVCCETYK 14 Unmodified _AHNVPVLVCCETYK_ 0 0 0 Q9UI10 Q9UI10 Q9UI10 EIF2B4 Translation initiation factor eIF-2B subunit delta MULTI-MSMS 210214_Eclipse_Hela_QC 563.941772460938 3 563.941092 1688.80145 0.36561 0.00020618 -0.30234 -0.0001705 0.063268 3.5679E-05 563.940990326616 42.329 0.79382 42.329 42.002 42.796 0 43 15 4 0 0 0 0.0060169 1 38790 38.376 32.078 1 11855000 1234 3879 1137 1152 1440 1440 AHPEPGTWDSFLEK 14 Unmodified _AHPEPGTWDSFLEK_ 0 0 0 P0DMN0;P0DMM9 P0DMN0 P0DMN0 SULT1A4;SULT1A3 Sulfotransferase 1A4;Sulfotransferase 1A3 MULTI-MSMS 210214_Eclipse_Hela_QC 538.591735839844 3 538.591334 1612.75217 0.25383 0.00013671 0.26019 0.00014014 0.51402 0.00027685 538.591458462823 61.634 0.54771 61.634 61.342 61.89 0 33 10 4 0 0 0 0.00030349 1 66143 47.774 43.672 1 9272900 1235 791 1138 1153 1441 1441 AHPVFYQGTYSQALNDAK 18 Unmodified _AHPVFYQGTYSQALNDAK_ 0 0 0 Q96CS3 Q96CS3 Q96CS3 FAF2 FAS-associated factor 2 MULTI-MSMS 210214_Eclipse_Hela_QC 670.99755859375 3 670.66204 2008.96429 0.8758 0.00058737 0.080625 5.4072E-05 0.95643 0.00064144 670.996333440066 53.034 0.69807 53.034 52.743 53.441 0 21 13 2 0 0 0 4.7507E-05 1 54049 72.184 62.396 1 14539000 1236 2992 1139 1154 1442 1442 AHQILVLQEGK 11 Unmodified _AHQILVLQEGK_ 0 0 0 Q03519 Q03519 Q03519 TAP2 Antigen peptide transporter 2 MULTI-MSMS 210214_Eclipse_Hela_QC 618.86083984375 2 618.358962 1234.70337 0.50568 0.00031269 0.030749 1.9014E-05 0.53643 0.0003317 618.359042471834 32.041 0.44305 32.041 31.818 32.261 0 14 8 2 0 0 0 0.035222 1 24436 36.422 22.968 1 4754700 1237 1842 1140 1155 1443 1443 AHQITDESLESTRR 14 Unmodified _AHQITDESLESTRR_ 0 0 1 O00161 O00161 O00161 SNAP23 Synaptosomal-associated protein 23 MULTI-MSMS 210214_Eclipse_Hela_QC 548.276428222656 3 548.276297 1641.80706 0.12915 7.0811E-05 0.3232 0.0001772 0.45235 0.00024802 548.276659240859 21.208 0.49839 21.208 21.061 21.559 0 15 9 3 0 0 0 0.047787 1 8908 29.328 24.78 1 3723900 1238 131 1141 1156 1444 1444 AHQLVLPPCDVVIK 14 Unmodified _AHQLVLPPCDVVIK_ 0 0 0 Q9NZB2;Q9NX05 Q9NZB2;Q9NX05 Q9NZB2 FAM120A;FAM120C Constitutive coactivator of PPAR-gamma-like protein 1;Constitutive coactivator of PPAR-gamma-like protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 530.635131835938 3 530.300838 1587.88068 -0.08001 -4.243E-05 -0.14338 -7.6036E-05 -0.22339 -0.00011847 530.635003440748 62.259 1.4338 62.259 61.741 63.174 0 45 28 2 0 0 0 0.011057 1 66986 35.809 27.632 1 7501000 1239 3760;3713 1142 1157 1445 1445 AHQLVMEGYK 10 Unmodified _AHQLVMEGYK_ 0 0 0 P60510 P60510 P60510 PPP4C Serine/threonine-protein phosphatase 4 catalytic subunit MULTI-SECPEP 210214_Eclipse_Hela_QC 588.266967773438 2 588.297516 1174.58048 0.56746 0.00033384 -0.54556 -0.00032095 0.021908 1.2888E-05 588.29711528103 25.736 0.29863 25.736 25.561 25.86 0 9 5 2 0 0 0 0.016227 1 15303 100.57 88.284 1 5380100 1240 1579 1143 1158 1446 1446 AHQLVMEGYNWCHDR 15 Unmodified _AHQLVMEGYNWCHDR_ 0 0 0 P62714;P67775 P62714;P67775 P67775 PPP2CB;PPP2CA Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform MULTI-MSMS 210214_Eclipse_Hela_QC 639.617919921875 3 639.2824 1914.82537 0.53477 0.00034187 -0.32993 -0.00021092 0.20484 0.00013095 639.282605784637 42.195 1.241 42.195 41.854 43.095 0 59 24 4 0 0 0 9.178E-05 1 38655 55.186 54 1 10337000 1241 1672;1722 1144 1159 1447 1447 AHQLVMEGYNWCHDR 15 Unmodified _AHQLVMEGYNWCHDR_ 0 0 0 P62714;P67775 P62714;P67775 P67775 PPP2CB;PPP2CA Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform MULTI-MSMS 210214_Eclipse_Hela_QC 479.964935302734 4 479.713619 1914.82537 0.22047 0.00010576 -0.078148 -3.7489E-05 0.14232 6.8274E-05 479.71364393785 42.233 0.84241 42.233 41.904 42.746 0 45 16 4 0 0 0 0.00013891 1 38663 53.995 49.752 1 8937300 1242 1672;1722 1144 1159 1448 1448 AHQTGIHATEELK 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AHQTGIHATEELK_ 1 0 0 Q6IBS0 Q6IBS0 Q6IBS0 TWF2 Twinfilin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 738.877075195312 2 738.875704 1475.73686 1.0227 0.00075564 -0.15895 -0.00011745 0.86374 0.00063819 738.875788988436 25.621 0.29864 25.621 25.462 25.761 0 20 5 6 0 0 0 1.4166E-23 1 15198 167.71 126.99 1 16058000 1243 2420 1145 1160 1449 1449 AHQVVEDGYEFFAK 14 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 P62136;P62140;P36873 P62136;P62140;P36873 P62140 PPP1CA;PPP1CB;PPP1CC Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 210214_Eclipse_Hela_QC 547.598022460938 3 547.263217 1638.76782 0.61102 0.00033439 0.15913 8.7087E-05 0.77015 0.00042147 547.263508265535 59.374 1.0445 59.374 59.055 60.099 0 71 20 5 0 0 0 0.0001869 2 62820 49.216 44.825 1 55435000 1244 1640;1639;1212 1146 1161 1450;1451 1450 AHQVVEDGYEFFAK 14 Unmodified _AHQVVEDGYEFFAK_ 0 0 0 P62136;P62140;P36873 P62136;P62140;P36873 P62140 PPP1CA;PPP1CB;PPP1CC Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit MULTI-MSMS 210214_Eclipse_Hela_QC 820.392028808594 2 820.391187 1638.76782 1.0868 0.00089159 -0.88081 -0.00072261 0.20597 0.00016898 820.390126514503 59.404 0.84539 59.404 59.055 59.9 0 31 16 2 0 0 0 5.7859E-38 1 63053 200.93 194.64 1 29823000 1245 1640;1639;1212 1146 1161 1452 1452 AHSIQIMK 8 Oxidation (M) _AHSIQIM(Oxidation (M))K_ AHSIQIM(1)K AHSIQIM(120)K 0 1 0 Q02543 Q02543 Q02543 RPL18A 60S ribosomal protein L18a MULTI-MSMS 210214_Eclipse_Hela_QC 472.756927490234 2 472.25512 942.495686 0.10188 4.8112E-05 -0.10695 -5.0508E-05 -0.0050725 -2.3955E-06 472.255041854573 22.277 0.44676 22.277 22.107 22.553 0 17 8 3 0 0 0 0.0018384 1 10428 117.1 81.479 1 13451000 1246 1829 1147 1162 1453 1453 475 AHSIQIMK 8 Unmodified _AHSIQIMK_ 0 0 0 Q02543 Q02543 Q02543 RPL18A 60S ribosomal protein L18a MULTI-MSMS 210214_Eclipse_Hela_QC 464.257904052734 2 464.257662 926.500772 0.19969 9.2705E-05 -0.11162 -5.1822E-05 0.088063 4.0884E-05 464.257645361084 22.28 0.64599 22.28 22.057 22.703 0 36 12 5 0 0 0 0.0018906 1 10514 107.29 59.552 1 238070000 1247 1829 1147 1163 1454 1454 AHSPMIAVGSDDSSPNAMAK 20 Unmodified _AHSPMIAVGSDDSSPNAMAK_ 0 0 0 Q96EE3 Q96EE3 Q96EE3 SEH1L Nucleoporin SEH1 MULTI-MSMS 210214_Eclipse_Hela_QC 662.974182128906 3 662.64003 1984.89826 0.48013 0.00031815 0.70425 0.00046666 1.1844 0.00078482 662.640076558774 41.019 0.59662 41.019 40.76 41.357 0 34 11 5 0 0 0 1.8584E-06 1 37016 65.022 47.322 1 15911000 1248 3009 1148 1164 1455 1455 AHSSMVGVNLPQK 13 Oxidation (M) _AHSSM(Oxidation (M))VGVNLPQK_ AHSSM(1)VGVNLPQK AHSSM(130)VGVNLPQK 0 1 0 P00558 P00558 P00558 PGK1 Phosphoglycerate kinase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 692.356872558594 2 692.356093 1382.69763 0.4638 0.00032112 0.10243 7.0919E-05 0.56623 0.00039204 692.356226543395 24.518 0.646 24.518 24.269 24.915 0 31 12 3 0 0 0 2.6189E-08 1 13515 125.7 89.364 1 16642000 1249 630 1149 1165 1456 1456 69 AHSSMVGVNLPQK 13 Oxidation (M) _AHSSM(Oxidation (M))VGVNLPQK_ AHSSM(1)VGVNLPQK AHSSM(64)VGVNLPQK 0 1 0 P00558 P00558 P00558 PGK1 Phosphoglycerate kinase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 461.906707763672 3 461.906488 1382.69763 0.21219 9.8012E-05 -0.20402 -9.424E-05 0.008167 3.7724E-06 461.906436621536 31.694 0.69511 31.694 31.371 32.066 0 34 13 4 0 0 0 0.00039693 1 23665 63.966 63.966 1 32920000 1250 630 1149 1165 1457 1457 69 AHSSMVGVNLPQK 13 Unmodified _AHSSMVGVNLPQK_ 0 0 0 P00558 P00558 P00558 PGK1 Phosphoglycerate kinase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 684.860046386719 2 684.358636 1366.70272 0.6466 0.0004425 -0.42289 -0.00028941 0.22371 0.0001531 684.358541802828 31.693 1.2892 31.693 31.172 32.461 0 79 25 6 0 0 0 2.3455E-86 2 23555 267.45 258.12 1 332850000 1251 630 1149 1166 1458;1459 1458 AHSSMVGVNLPQK 13 Unmodified _AHSSMVGVNLPQK_ 0 0 0 P00558 P00558 P00558 PGK1 Phosphoglycerate kinase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 456.574737548828 3 456.57485 1366.70272 0.12932 5.9043E-05 -0.37217 -0.00016992 -0.24285 -0.00011088 456.57485086767 31.694 1.3886 31.694 31.222 32.61 0 99 27 6 0 0 0 6.1721E-24 2 23564 140.24 127.45 1 375580000 1252 630 1149 1166 1460;1461 1460 AHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLR 37 Unmodified _AHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLR_ 0 0 0 P46937 P46937 P46937 YAP1 Transcriptional coactivator YAP1 MULTI-MSMS 210214_Eclipse_Hela_QC 884.725036621094 4 884.472037 3533.85904 1.4188 0.0012549 0.35833 0.00031693 1.7771 0.0015718 884.723050804944 76.006 0.62701 76.006 75.751 76.378 0 52 12 6 0 0 0 2.0425E-10 2 86268 68.304 66.721 1 12965000 1253 1321 1150 1167 1462;1463 1463 AHTDFFEAFK 10 Unmodified _AHTDFFEAFK_ 0 0 0 P61201 P61201 P61201 COPS2 COP9 signalosome complex subunit 2 MULTI-SECPEP 210214_Eclipse_Hela_QC 607.30517578125 2 606.787838 1211.56112 0.44512 0.00027009 0.30459 0.00018482 0.74971 0.00045492 607.289778223178 58.649 0.59692 58.649 58.308 58.905 0 28 11 4 0 0 0 0.016935 1 61951 90.761 81.547 1 11888000 1254 1608 1151 1168 1464 1464 AHTMTDDVTFWK 12 Unmodified _AHTMTDDVTFWK_ 0 0 0 Q00610 Q00610 Q00610 CLTC Clathrin heavy chain 1 MULTI-MSMS 210214_Eclipse_Hela_QC 726.3359375 2 726.334827 1450.6551 1.197 0.00086941 -0.12485 -9.0681E-05 1.0721 0.00077873 726.334762956555 57.335 1.0952 57.335 57.064 58.159 0 69 21 5 0 0 0 6.4231E-08 1 60046 120.76 110.76 1 41240000 1255 1802 1152 1169 1465 1465 AHTMTDDVTFWK 12 Unmodified _AHTMTDDVTFWK_ 0 0 0 Q00610 Q00610 Q00610 CLTC Clathrin heavy chain 1 MULTI-MSMS 210214_Eclipse_Hela_QC 484.893737792969 3 484.558977 1450.6551 0.68851 0.00033362 -0.040851 -1.9795E-05 0.64766 0.00031383 484.558961634818 57.39 0.59762 57.39 57.113 57.711 0 27 11 3 0 0 0 0.0070045 1 60180 31.348 28.785 1 3720700 1256 1802 1152 1169 1466 1466 AHTSSTQLQEELEK 14 Unmodified _AHTSSTQLQEELEK_ 0 0 0 Q9Y6Y8 Q9Y6Y8 Q9Y6Y8 SEC23IP SEC23-interacting protein MULTI-MSMS 210214_Eclipse_Hela_QC 801.39697265625 2 800.894291 1599.77403 1.2911 0.0010341 -0.13482 -0.00010798 1.1563 0.00092608 800.894125277116 28.154 0.34822 28.154 27.99 28.338 0 17 6 3 0 0 0 0.01121 1 18842 40.727 34.882 1 6231200 1257 4169 1153 1170 1467 1467 AHTSSTQLQEELEK 14 Unmodified _AHTSSTQLQEELEK_ 0 0 0 Q9Y6Y8 Q9Y6Y8 Q9Y6Y8 SEC23IP SEC23-interacting protein MULTI-MSMS 210214_Eclipse_Hela_QC 534.266296386719 3 534.265286 1599.77403 0.63999 0.00034192 0.3538 0.00018902 0.99379 0.00053095 534.265572912817 28.17 0.44772 28.17 27.94 28.388 0 17 8 3 0 0 0 0.045883 1 18847 17.238 12.886 1 4915500 1258 4169 1153 1170 1468 1468 AHTVLAASCAR 11 Unmodified _AHTVLAASCAR_ 0 0 0 Q8WUY1 Q8WUY1 Q8WUY1 THEM6 Protein THEM6 MULTI-MSMS 210214_Eclipse_Hela_QC 578.798156738281 2 578.798214 1155.58188 0.49322 0.00028547 -0.41414 -0.0002397 0.079077 4.577E-05 578.798355033747 19.416 0.49812 19.416 19.219 19.718 0 17 8 3 0 0 0 1.3966E-10 2 6244 136.57 100.17 1 11897000 1259 2835 1154 1171 1469;1470 1470 AHVFECNLESSVESIISPK 19 Unmodified _AHVFECNLESSVESIISPK_ 0 0 0 O60216 O60216 O60216 RAD21 Double-strand-break repair protein rad21 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 716.356384277344 3 716.021016 2145.04122 1.0984 0.00078651 0.13932 9.9754E-05 1.2378 0.00088626 716.355255235057 89.884 0.94394 89.884 89.412 90.356 0 53 18 4 0 0 0 0.001951 1 105335 37.285 33.737 1 10801000 1260 351 1155 1172 1471 1471 AHVIVMAATNRPNSIDPALR 20 Unmodified _AHVIVMAATNRPNSIDPALR_ 0 0 1 P55072 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase MULTI-MSMS 210214_Eclipse_Hela_QC 537.546020507812 4 537.294199 2145.14769 0.7006 0.00037643 -0.98622 -0.00052989 -0.28563 -0.00015347 537.293344598005 49.54 1.3906 49.54 49.237 50.628 0 62 27 5 0 0 0 1.6805E-05 2 49092 69.935 61.443 1 21843000 1261 1531 1156 1173 1472;1473 1473 AHVIVMAATNRPNSIDPALR 20 Unmodified _AHVIVMAATNRPNSIDPALR_ 0 0 1 P55072 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase MULTI-MSMS 210214_Eclipse_Hela_QC 716.392578125 3 716.056507 2145.14769 0.79594 0.00056994 0.024002 1.7187E-05 0.81995 0.00058713 716.39101348547 49.534 0.64407 49.534 49.187 49.831 0 43 12 5 0 0 0 0.0002243 1 49101 61.167 56.814 1 10488000 1262 1531 1156 1173 1474 1474 AHVLHFGK 8 Unmodified _AHVLHFGK_ 0 0 0 Q9BTE3 Q9BTE3 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein MULTI-MSMS 210214_Eclipse_Hela_QC 454.758331298828 2 454.758687 907.502821 0.11362 5.1668E-05 -0.24543 -0.00011161 -0.13182 -5.9945E-05 454.758533741462 20.257 0.29872 20.257 20.115 20.414 0 11 5 3 0 0 0 0.0035181 1 7505 86.086 73.038 1 7908900 1263 3271 1157 1174 1475 1475 AHVVPCFDASK 11 Unmodified _AHVVPCFDASK_ 0 0 0 P21333 P21333 P21333 FLNA Filamin-A MULTI-MSMS 210214_Eclipse_Hela_QC 615.800720214844 2 615.800423 1229.58629 0.30009 0.00018479 0.15646 9.6348E-05 0.45655 0.00028114 615.800465409619 29.339 1.3311 29.339 28.894 30.225 0 62 26 4 0 0 0 0.00029651 1 20290 86.18 77.486 1 113530000 1264 995 1158 1175 1476 1476 AHVVPCFDASK 11 Unmodified _AHVVPCFDASK_ 0 0 0 P21333 P21333 P21333 FLNA Filamin-A MULTI-MSMS 210214_Eclipse_Hela_QC 410.869781494141 3 410.869374 1229.58629 -0.048547 -1.9947E-05 1.8157 0.00074601 1.7671 0.00072606 410.869388626536 29.357 0.54661 29.357 29.082 29.628 0 32 10 4 0 0 0 0.0016608 1 20461 42.243 30.71 1 8663200 1265 995 1158 1175 1477 1477 AHVYCEGNDVYDVMLNQTNLQFNNNK 26 Unmodified _AHVYCEGNDVYDVMLNQTNLQFNNNK_ 0 0 0 Q9UGN5 Q9UGN5 Q9UGN5 PARP2 Poly [ADP-ribose] polymerase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 1034.47106933594 3 1034.13443 3099.38147 1.342 0.0013878 -0.54035 -0.00055879 0.80164 0.000829 1034.46839243942 85.215 0.44732 85.215 84.997 85.445 0 32 8 6 0 0 0 9.9366E-05 2 99229 52.483 49.654 1 3992400 1266 3851 1159 1176 1478;1479 1479 AIAALISEK 9 Unmodified _AIAALISEK_ 0 0 0 Q8IXB1 Q8IXB1 Q8IXB1 DNAJC10 DnaJ homolog subfamily C member 10 MULTI-MSMS 210214_Eclipse_Hela_QC 458.279907226562 2 458.279118 914.543683 0.35101 0.00016086 0.48378 0.00022171 0.83479 0.00038257 458.279329653748 44.569 0.4469 44.569 44.339 44.786 0 14 8 2 0 0 0 0.014358 1 42127 51.346 28.854 1 3598200 1267 2634 1160 1177 1480 1480 AIACVVTACSAELEK 15 Unmodified _AIACVVTACSAELEK_ 0 0 0 Q5VYK3 Q5VYK3 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 811.400329589844 2 811.399841 1620.78513 0.98626 0.00080025 -1.0585 -0.00085886 -0.072224 -5.8603E-05 811.400117075446 58.778 0.5475 58.778 58.507 59.055 0 29 10 4 0 0 0 7.6575E-05 1 62231 84.479 80.181 1 7836200 1268 2385 1161 1178 1481 1481 AIADTGANVVVTGGK 15 Unmodified _AIADTGANVVVTGGK_ 0 0 0 P50990 P50990 P50990 CCT8 T-complex protein 1 subunit theta MULTI-MSMS 210214_Eclipse_Hela_QC 686.875549316406 2 686.875173 1371.73579 0.76229 0.0005236 0.0081973 5.6305E-06 0.77049 0.00052923 686.875145525207 43.568 0.74722 43.568 43.194 43.942 0 57 14 5 0 0 0 3.426E-05 2 40439 116.03 78.834 1 136070000 1269 1428 1162 1179 1482;1483 1482 AIAEGLGSELLVGTTK 16 Unmodified _AIAEGLGSELLVGTTK_ 0 0 0 Q32P44 Q32P44 Q32P44 EML3 Echinoderm microtubule-associated protein-like 3 MULTI-MSMS 210214_Eclipse_Hela_QC 779.939392089844 2 779.93797 1557.86139 1.6972 0.0013237 0.6287 0.00049035 2.3259 0.001814 779.938336212225 81.427 0.39731 81.427 81.252 81.65 0 17 7 3 0 0 0 0.0033637 1 93890 48.004 30.14 1 3754500 1270 2275 1163 1180 1484 1484 AIAELGIYPAVDPLDSTSR 19 Unmodified _AIAELGIYPAVDPLDSTSR_ 0 0 0 P06576 P06576 P06576 ATP5B ATP synthase subunit beta, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 995.022277832031 2 994.520387 1987.02622 2.0056 0.0019946 -0.59728 -0.000594 1.4083 0.0014006 995.020906938566 101.62 1.84 101.62 101.1 102.94 0 141 36 7 0 0 0 1.5873E-13 4 121565 164.53 133.64 1 261080000 1271 699 1164 1181 1485;1486;1487;1488 1486 AIAFLQQPR 9 Unmodified _AIAFLQQPR_ 0 0 0 P22102 P22102 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase MULTI-MSMS 210214_Eclipse_Hela_QC 522.303527832031 2 522.303458 1042.59236 0.29493 0.00015404 0.24539 0.00012817 0.54032 0.00028221 522.303562832732 54.85 1.0884 54.85 54.333 55.421 0 56 21 5 0 0 0 2.3089E-05 2 56547 130.05 98.761 1 45208000 1272 1006 1165 1182 1489;1490 1490 AIAFTQYPQYSCSTTGSSLNAIYR 24 Unmodified _AIAFTQYPQYSCSTTGSSLNAIYR_ 0 0 0 P22830 P22830 P22830 FECH Ferrochelatase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1350.64489746094 2 1350.14213 2698.26972 1.7309 0.0023369 0.45758 0.00061779 2.1884 0.0029547 1350.64434661509 86.979 0.49675 86.979 86.687 87.184 0 29 9 5 0 0 0 0.00087816 1 101520 45.863 39.565 1 2896800 1273 1015 1166 1183 1491 1491 AIAGVINQPYYNYEAGPDAVLGR 23 Unmodified _AIAGVINQPYYNYEAGPDAVLGR_ 0 0 0 O95861 O95861 O95861 BPNT1 3(2),5-bisphosphate nucleotidase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1226.623046875 2 1226.11879 2450.22302 2.4619 0.0030186 0.59517 0.00072975 3.0571 0.0037483 1226.62063697978 93.612 0.69561 93.612 93.24 93.936 0 38 13 4 0 0 0 1.8934E-09 2 110699 91.207 82.608 1 8798300 1274 604 1167 1184 1492;1493 1492 AIAHYEQSADYYK 13 Unmodified _AIAHYEQSADYYK_ 0 0 0 P54920;Q9H115 P54920 P54920 NAPA;NAPB Alpha-soluble NSF attachment protein;Beta-soluble NSF attachment protein MULTI-MSMS 210214_Eclipse_Hela_QC 520.244384765625 3 520.243934 1557.70997 0.39355 0.00020474 1.2146 0.00063191 1.6082 0.00083666 520.245144640227 29.762 0.99412 29.762 29.43 30.424 0 41 19 4 0 0 0 0.00011166 2 21014 61.212 56.896 1 10547000 1275 1524 1168 1185 1494;1495 1494 AIAHYEQSADYYK 13 Unmodified _AIAHYEQSADYYK_ 0 0 0 P54920;Q9H115 P54920 P54920 NAPA;NAPB Alpha-soluble NSF attachment protein;Beta-soluble NSF attachment protein MULTI-MSMS 210214_Eclipse_Hela_QC 779.862609863281 2 779.862263 1557.70997 1.1415 0.0008902 -0.13189 -0.00010286 1.0096 0.00078735 779.861936160597 29.77 0.59626 29.77 29.43 30.026 0 22 11 3 0 0 0 0.0010352 2 21041 61.65 54.27 1 4864500 1276 1524 1168 1185 1496;1497 1496 AIAIASDMQDDFISPCGACR 20 Unmodified _AIAIASDMQDDFISPCGACR_ 0 0 0 P32320 P32320 P32320 CDA Cytidine deaminase MULTI-MSMS 210214_Eclipse_Hela_QC 1099.98950195312 2 1099.48738 2196.96021 0.84986 0.00093441 -0.052763 -5.8012E-05 0.7971 0.0008764 1099.98930960993 86.91 0.64619 86.91 86.588 87.234 0 60 12 6 0 0 0 1.7125E-49 1 101276 185.59 180.42 1 32077000 1277 1158 1169 1186 1498 1498 AIAIPVDLDSQVNNLFLK 18 Unmodified _AIAIPVDLDSQVNNLFLK_ 0 0 0 Q14643 Q14643 Q14643 ITPR1 Inositol 1,4,5-trisphosphate receptor type 1 MULTI-MSMS 210214_Eclipse_Hela_QC 985.552856445312 2 985.55149 1969.08843 1.3437 0.0013243 -0.028196 -2.7789E-05 1.3155 0.0012965 985.551709848168 107.43 0.29817 107.43 107.26 107.56 0 12 5 3 0 0 0 0.0024051 1 129947 46.592 41.609 1 15873000 1278 2094 1170 1187 1499 1499 AIALQPENPMAHFLLGR 17 Unmodified _AIALQPENPMAHFLLGR_ 0 0 0 Q96TC7 Q96TC7 Q96TC7 RMDN3 Regulator of microtubule dynamics protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 626.673034667969 3 626.673334 1876.99817 0.39593 0.00024812 -0.16745 -0.00010494 0.22848 0.00014318 627.007541497186 95.875 0.80161 95.875 95.521 96.323 0 38 16 3 0 0 0 0.00021705 1 113785 53.828 49.86 1 10720000 1279 3153 1171 1188 1500 1500 AIANECQANFISIK 14 Unmodified _AIANECQANFISIK_ 0 0 0 P55072 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase MULTI-MSMS 210214_Eclipse_Hela_QC 789.9013671875 2 789.900865 1577.78718 0.2957 0.00023358 0.062043 4.9008E-05 0.35775 0.00028258 789.900981119465 62.234 0.88679 62.234 61.89 62.777 0 56 17 5 0 0 0 3.7845E-14 1 66906 146.16 136.84 1 76004000 1280 1531 1172 1189 1501 1501 AIAVLTSGGDAQGMNAAVR 19 Unmodified _AIAVLTSGGDAQGMNAAVR_ 0 0 0 P08237 P08237 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type MULTI-MSMS 210214_Eclipse_Hela_QC 901.466735839844 2 901.464892 1800.91523 0.019927 1.7964E-05 0.31768 0.00028638 0.33761 0.00030434 901.966933738797 62.22 0.44171 62.22 61.94 62.381 0 18 8 3 0 0 0 7.7889E-06 1 66944 85.288 79.056 1 7632200 1281 744 1173 1190 1502 1502 AIAVMEEFR 9 Unmodified _AIAVMEEFR_ 0 0 0 Q96DT5 Q96DT5 Q96DT5 DNAH11 Dynein heavy chain 11, axonemal MULTI-MSMS 210214_Eclipse_Hela_QC 533.273803710938 2 533.273509 1064.53247 0.52269 0.00027874 0.085305 4.5491E-05 0.60799 0.00032423 533.273549580984 78.742 0.79571 78.742 78.369 79.165 0 38 15 3 0 0 0 0.015192 1 90001 50.966 34.411 1 11534000 1282 3002 1174 1191 1503 1503 AIAVTVQEMVTK 12 Unmodified _AIAVTVQEMVTK_ 0 0 0 Q9Y490 Q9Y490 Q9Y490 TLN1 Talin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 645.861511230469 2 645.360313 1288.70607 1.4071 0.00090812 -0.23889 -0.00015417 1.1683 0.00075395 645.360475353041 60.538 0.59695 60.538 60.299 60.896 0 16 11 2 0 0 0 0.041835 1 64835 34.532 10.013 1 4685100 1283 4084 1175 1192 1504 1504 AIAYLFPSGLFEK 13 Unmodified _AIAYLFPSGLFEK_ 0 0 0 P82933 P82933 P82933 MRPS9 28S ribosomal protein S9, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 728.39794921875 2 728.397753 1454.78095 0.93323 0.00067976 -0.29716 -0.00021645 0.63606 0.00046331 728.397492239841 105.45 0.39865 105.45 105.33 105.72 0 22 7 5 0 0 0 1.8573E-06 1 127140 114.83 104.53 1 30795000 1284 1771 1176 1193 1505 1505 AICIPEGAK 9 Unmodified _AICIPEGAK_ 0 0 0 Q6PI48 Q6PI48 Q6PI48 DARS2 Aspartate--tRNA ligase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 479.755218505859 2 479.754953 957.495352 0.35873 0.0001721 -0.21772 -0.00010445 0.14101 6.7652E-05 479.754750138235 34.335 0.74448 34.335 33.916 34.661 0 33 15 4 0 0 0 0.0060431 1 27484 62.573 46.025 1 11778000 1285 2460 1177 1194 1506 1506 AIDDNMSLDEIEK 13 Unmodified _AIDDNMSLDEIEK_ 0 0 0 P31327 P31327 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 746.847106933594 2 746.845421 1491.67629 1.0369 0.00077443 -0.15231 -0.00011375 0.88463 0.00066068 746.84552407524 66.645 1.2386 66.645 65.95 67.189 0 82 24 6 0 0 0 3.5084E-37 2 73072 199.68 190.32 1 197870000 1286 1141 1178 1195 1507;1508 1508 AIDDNMSLDEIEK 13 Oxidation (M) _AIDDNM(Oxidation (M))SLDEIEK_ AIDDNM(1)SLDEIEK AIDDNM(100)SLDEIEK 0 1 0 P31327 P31327 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 754.844787597656 2 754.842878 1507.6712 0.97221 0.00073387 -0.11031 -8.327E-05 0.8619 0.0006506 754.84290539135 66.672 0.54771 66.672 66.398 66.946 0 33 10 4 0 0 0 2.1664E-05 1 73223 103.34 85.478 1 9868500 1287 1141 1178 1196 1509 1509 292 AIDDSSASISLAQLTK 16 Unmodified _AIDDSSASISLAQLTK_ 0 0 0 Q7Z6E9 Q7Z6E9 Q7Z6E9 RBBP6 E3 ubiquitin-protein ligase RBBP6 MULTI-MSMS 210214_Eclipse_Hela_QC 810.428039550781 2 810.427967 1618.84138 0.993 0.00080476 0.46054 0.00037323 1.4535 0.001178 810.428024509785 78.766 0.44733 78.766 78.568 79.015 0 20 8 3 0 0 0 0.00026931 1 90175 83.314 62.537 1 5912000 1288 2554 1179 1197 1510 1510 AIDENNEPTACFLIR 15 Unmodified _AIDENNEPTACFLIR_ 0 0 0 Q9P2R3 Q9P2R3 Q9P2R3 ANKFY1 Rabankyrin-5 MULTI-MSMS 210214_Eclipse_Hela_QC 882.429870605469 2 881.925068 1761.83558 1.2532 0.0011053 -2.3745 -0.0020941 -1.1212 -0.00098885 881.923023394149 74.531 0.74474 74.531 74.158 74.903 0 26 14 2 0 0 0 4.5528E-05 1 84071 90.685 76.266 1 5890000 1289 3806 1180 1198 1511 1511 AIDIYEQVGTNAMDSPLLK 19 Unmodified _AIDIYEQVGTNAMDSPLLK_ 0 0 0 P54920 P54920 P54920 NAPA Alpha-soluble NSF attachment protein MULTI-MSMS 210214_Eclipse_Hela_QC 1039.53002929688 2 1039.52735 2077.04016 1.8178 0.0018896 1.1553 0.001201 2.9731 0.0030906 1040.03021054604 97.839 0.54601 97.839 97.616 98.162 0 28 10 4 0 0 0 0.035719 1 116643 39.219 32.089 1 3402400 1290 1524 1181 1199 1512 1512 AIDLFTDAIK 10 Unmodified _AIDLFTDAIK_ 0 0 0 P50502;Q8IZP2;Q8NFI4 P50502 P50502 ST13;ST13P4;ST13P5 Hsc70-interacting protein;Putative protein FAM10A4;Putative protein FAM10A5 MULTI-MSMS 210214_Eclipse_Hela_QC 554.290649414062 2 553.808239 1105.60193 0.96671 0.00053537 -0.033607 -1.8612E-05 0.9331 0.00051676 553.808258328651 81.718 0.99381 81.718 81.302 82.296 0 49 19 4 0 0 0 9.1814E-06 2 94177 123.35 89.352 1 40218000 1291 1416 1182 1200 1513;1514 1514 AIDLMNALMR 10 Unmodified _AIDLMNALMR_ 0 0 0 Q96SI9 Q96SI9 Q96SI9 STRBP Spermatid perinuclear RNA-binding protein MULTI-MSMS 210214_Eclipse_Hela_QC 574.803894042969 2 574.301744 1146.58893 1.4375 0.00082556 -0.71211 -0.00040897 0.72539 0.00041659 574.301693938053 91.571 0.74565 91.571 91.3 92.046 0 38 14 4 0 0 0 0.006223 1 107851 54.157 33.637 1 3953900 1292 3137 1183 1201 1515 1515 AIDTIYQTTDFSGIR 15 Unmodified _AIDTIYQTTDFSGIR_ 0 0 0 O14672 O14672 O14672 ADAM10 Disintegrin and metalloproteinase domain-containing protein 10 MULTI-MSMS 210214_Eclipse_Hela_QC 851.432312011719 2 850.928134 1699.84172 1.6696 0.0014207 2.1391 0.0018203 3.8088 0.003241 850.929274548712 79.339 0.54717 79.339 79.065 79.612 0 26 10 4 0 0 0 9.7365E-05 1 91045 101.93 89.715 1 5305400 1293 199 1184 1202 1516 1516 AIDTTQLFSLPK 12 Unmodified _AIDTTQLFSLPK_ 0 0 0 Q16822 Q16822 Q16822 PCK2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 667.872741699219 2 667.371735 1332.72892 0.69129 0.00046135 -0.73186 -0.00048843 -0.040572 -2.7076E-05 667.371154341041 88.288 0.93449 88.288 87.93 88.865 0 48 18 4 0 0 0 5.7078E-08 1 103138 122.26 93.859 1 30031000 1294 2256 1185 1203 1517 1517 AIEALHGHELRPGR 14 Unmodified _AIEALHGHELRPGR_ 0 0 1 Q96PK6 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 MULTI-MSMS 210214_Eclipse_Hela_QC 519.28662109375 3 519.286579 1554.83791 0.055317 2.8725E-05 0.17082 8.8704E-05 0.22614 0.00011743 519.286694005774 22.778 0.49852 22.778 22.553 23.052 0 23 9 4 0 0 0 2.116E-19 1 11099 140.08 131.05 1 33829000 1295 3111 1186 1204 1518 1518 AIEAVAISPWK 11 Unmodified _AIEAVAISPWK_ 0 0 0 Q9H4A4 Q9H4A4 Q9H4A4 RNPEP Aminopeptidase B MULTI-MSMS 210214_Eclipse_Hela_QC 592.838134765625 2 592.837331 1183.66011 0.90777 0.00053816 0.070367 4.1716E-05 0.97814 0.00057988 592.837330675615 71.622 0.84636 71.622 71.268 72.115 0 39 16 3 0 0 0 0.00055599 1 80095 78.939 61.699 1 19060000 1296 3467 1187 1205 1519 1519 AIEDEGGNPDEIEITSEGNK 20 Unmodified _AIEDEGGNPDEIEITSEGNK_ 0 0 0 Q15424 Q15424 Q15424 SAFB Scaffold attachment factor B1 MULTI-MSMS 210214_Eclipse_Hela_QC 1058.98046875 2 1058.97948 2115.9444 1.1808 0.0012505 0.19588 0.00020743 1.3767 0.0014579 1059.48143379938 56.095 0.69755 56.095 55.819 56.517 0 43 13 5 0 0 0 0.00025814 1 58297 69.108 63.93 1 26237000 1297 2184 1188 1206 1520 1520 AIEDEGGNPDEIEITSEGNKK 21 Unmodified _AIEDEGGNPDEIEITSEGNKK_ 0 0 1 Q15424 Q15424 Q15424 SAFB Scaffold attachment factor B1 MULTI-MSMS 210214_Eclipse_Hela_QC 749.357238769531 3 749.020398 2244.03936 1.1339 0.00084932 -0.14056 -0.00010528 0.99334 0.00074403 749.02044319733 43.883 0.49788 43.883 43.643 44.141 0 28 9 4 0 0 0 0.00011449 1 41316 41.136 37.849 1 14550000 1298 2184 1189 1207 1521 1521 AIEDYINEFSVR 12 Unmodified _AIEDYINEFSVR_ 0 0 0 CON__Q3MHN2;P02748 CON__Q3MHN2 CON__Q3MHN2 C9 Complement component C9;Complement component C9a;Complement component C9b MULTI-MSMS 210214_Eclipse_Hela_QC 728.361938476562 2 728.359356 1454.70416 1.2944 0.00094276 -0.32031 -0.0002333 0.97405 0.00070946 728.35895037355 91.128 0.69601 91.128 90.803 91.499 0 40 13 4 0 0 0 5.3424E-05 1 107176 98.943 87.791 1 12546000 + 1299 96 1190 1208 1522 1522 AIEEGIPAFTCEEYVK 16 Unmodified _AIEEGIPAFTCEEYVK_ 0 0 0 Q9Y2L1 Q9Y2L1 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 MULTI-MSMS 210214_Eclipse_Hela_QC 928.94384765625 2 928.44276 1854.87097 0.68334 0.00063444 0.067912 6.3052E-05 0.75125 0.0006975 928.442277254786 80.349 0.79417 80.349 80.01 80.805 0 52 15 5 0 0 0 0.024608 1 92208 34.501 31.179 1 17801000 1300 4006 1191 1209 1523 1523 AIEEGVNHMWTVSAFQQHPR 20 Unmodified _AIEEGVNHMWTVSAFQQHPR_ 0 0 0 P46926;Q8TDQ7 P46926;Q8TDQ7 P46926 GNPDA1;GNPDA2 Glucosamine-6-phosphate isomerase 1;Glucosamine-6-phosphate isomerase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 585.2861328125 4 585.035285 2336.11203 1.3772 0.0008057 -0.74043 -0.00043318 0.63674 0.00037252 585.285470807704 60.895 0.89458 60.895 60.349 61.243 0 55 17 5 0 0 0 0.056705 1 64962 14.105 9.7527 1 12770000 1301 1319;2806 1192 1210 1524 1524 AIEEIAGVGVPELINSPK 18 Unmodified _AIEEIAGVGVPELINSPK_ 0 0 0 Q9BXW9 Q9BXW9 Q9BXW9 FANCD2 Fanconi anemia group D2 protein MULTI-MSMS 210214_Eclipse_Hela_QC 918.509460449219 2 918.509291 1835.00403 1.493 0.0013714 -0.20749 -0.00019058 1.2856 0.0011808 918.508926798255 95 0.64636 95 94.676 95.323 0 19 12 2 0 0 0 0.00389 1 112641 55.452 49.846 1 4362600 1302 3348 1193 1211 1525 1525 AIEFLSAFK 9 Unmodified _AIEFLSAFK_ 0 0 0 Q32P41 Q32P41 Q32P41 TRMT5 tRNA (guanine(37)-N1)-methyltransferase MULTI-MSMS 210214_Eclipse_Hela_QC 513.288208007812 2 513.286943 1024.55933 1.4859 0.00076268 -0.2375 -0.0001219 1.2484 0.00064078 513.286726121204 83.357 0.64702 83.357 83.006 83.653 0 24 11 3 0 0 0 0.0068059 1 96530 60.59 40.953 1 1998000 1303 2274 1194 1212 1526 1526 AIEGFNQSSHQK 12 Unmodified _AIEGFNQSSHQK_ 0 0 0 Q16222 Q16222 Q16222 UAP1 UDP-N-acetylhexosamine pyrophosphorylase;UDP-N-acetylgalactosamine pyrophosphorylase;UDP-N-acetylglucosamine pyrophosphorylase MULTI-MSMS 210214_Eclipse_Hela_QC 673.82958984375 2 673.32839 1344.64223 0.44265 0.00029805 0.16795 0.00011309 0.61061 0.00041114 673.328423253991 19.693 0.34859 19.693 19.518 19.867 0 14 6 3 0 0 0 7.0526E-08 1 6647 123.88 109.88 1 8766900 1304 2226 1195 1213 1527 1527 AIEHADGGVAAGVAVLDNPYPV 22 Unmodified _AIEHADGGVAAGVAVLDNPYPV_ 0 0 0 P48637 P48637 P48637 GSS Glutathione synthetase MULTI-MSMS 210214_Eclipse_Hela_QC 1068.54602050781 2 1068.04202 2134.06948 1.3602 0.0014528 -0.9832 -0.0010501 0.37703 0.00040269 1068.54256088781 92.718 1.3431 92.718 92.195 93.538 0 77 26 4 0 0 0 9.8976E-08 2 109325 113.65 113.65 1 20866000 1305 1347 1196 1214 1528;1529 1529 AIEINPDSAQPYK 13 Unmodified _AIEINPDSAQPYK_ 0 0 0 P50502;Q8IZP2;Q8NFI4 P50502 P50502 ST13;ST13P4;ST13P5 Hsc70-interacting protein;Putative protein FAM10A4;Putative protein FAM10A5 MULTI-MSMS 210214_Eclipse_Hela_QC 723.368103027344 2 723.367181 1444.71981 1.2927 0.00093509 -0.076793 -5.5549E-05 1.2159 0.00087954 723.367222094424 50.306 1.1418 50.306 49.585 50.727 0 56 22 4 0 0 0 0.00011733 1 50075 110.38 102.44 1 49039000 1306 1416 1197 1215 1530 1530 AIELFSVGQGPAK 13 Unmodified _AIELFSVGQGPAK_ 0 0 0 P30419 P30419 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 658.866027832031 2 658.864077 1315.7136 1.1323 0.00074602 0.86354 0.00056896 1.9958 0.001315 658.864740296652 69.945 0.69664 69.945 69.576 70.273 0 38 12 4 0 0 0 1.0445E-08 1 77800 125.48 89.536 1 18983000 1307 1125 1198 1216 1531 1531 AIELLQEFSDQHPENAAEIK 20 Unmodified _AIELLQEFSDQHPENAAEIK_ 0 0 0 O76094 O76094 O76094 SRP72 Signal recognition particle subunit SRP72 MULTI-MSMS 210214_Eclipse_Hela_QC 761.717468261719 3 761.38149 2281.12264 1.1152 0.0008491 0.92013 0.00070057 2.0353 0.0015497 761.716487244471 80.673 0.94347 80.673 80.21 81.153 0 63 18 7 0 0 0 3.1383E-07 1 92702 95.094 87.7 1 14827000 1308 510 1199 1217 1532 1532 AIELWYHDPACTTPVLK 17 Unmodified _AIELWYHDPACTTPVLK_ 0 0 0 Q9UIA9 Q9UIA9 Q9UIA9 XPO7 Exportin-7 MSMS 210214_Eclipse_Hela_QC 672.008728027344 3 672.008271 2013.00298 NaN NaN NaN NaN NaN NaN NaN 77.265 1 77.265 76.765 77.765 0 0 0 0 3.7931E-05 1 88059 74.772 59.534 1 1309 3883 1200 1218 1533 1533 AIELYNDK 8 Unmodified _AIELYNDK_ 0 0 0 Q96BN8 Q96BN8 Q96BN8 OTULIN Ubiquitin thioesterase otulin MULTI-MSMS 210214_Eclipse_Hela_QC 483.250335693359 2 483.250557 964.486562 0.33065 0.00015979 -0.022655 -1.0948E-05 0.308 0.00014884 483.250450568108 33.536 0.48708 33.536 33.231 33.718 0 16 9 2 0 0 0 0.0085404 1 26494 69.198 39.822 1 10156000 1310 2976 1201 1219 1534 1534 AIEMLGGELGSK 12 Unmodified _AIEMLGGELGSK_ 0 0 0 P07954 P07954 P07954 FH Fumarate hydratase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 602.816833496094 2 602.815738 1203.61692 1.1364 0.00068506 0.093893 5.66E-05 1.2303 0.00074166 602.815869143006 60.987 0.99397 60.987 60.647 61.641 0 66 19 5 0 0 0 1.286E-05 2 65098 107.83 53.423 1 63619000 1311 735 1202 1220 1535;1536 1536 AIEPNDYTGK 10 Unmodified _AIEPNDYTGK_ 0 0 0 O75223 O75223 O75223 GGCT Gamma-glutamylcyclotransferase MULTI-MSMS 210214_Eclipse_Hela_QC 554.269226074219 2 554.269478 1106.5244 0.01128 6.252E-06 0.0014578 8.0799E-07 0.012738 7.06E-06 554.269543272834 26.388 0.84698 26.388 26.158 27.005 0 38 16 4 0 0 0 0.00048426 1 16248 86.205 61.386 1 30000000 1312 433 1203 1221 1537 1537 AIEPPPLDAVIEAEHTLR 18 Unmodified _AIEPPPLDAVIEAEHTLR_ 0 0 0 Q08211 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A MULTI-MSMS 210214_Eclipse_Hela_QC 657.689208984375 3 657.689707 1970.04729 1.1892 0.00078212 0.17717 0.00011653 1.3664 0.00089864 658.024099427776 95.548 1.5963 95.548 94.826 96.422 0 109 25 6 0 0 0 9.7639E-06 3 113029 87.16 81.951 1 108290000 1313 1882 1204 1222 1538;1539;1540 1539 AIEQADLLQEEAETPR 16 Unmodified _AIEQADLLQEEAETPR_ 0 0 0 P56377 P56377 P56377 AP1S2 AP-1 complex subunit sigma-2 MULTI-MSMS 210214_Eclipse_Hela_QC 907.456237792969 2 906.952337 1811.89012 2.0798 0.0018863 0.50258 0.00045582 2.5824 0.0023421 907.454269997821 65.627 0.39783 65.627 65.354 65.751 0 14 7 3 0 0 0 0.00048986 1 71798 73.848 59.429 1 3031000 1314 1555 1205 1223 1541 1541 AIEQADLLQEEDESPR 16 Unmodified _AIEQADLLQEEDESPR_ 0 0 0 P61966 P61966 P61966 AP1S1 AP-1 complex subunit sigma-1A MULTI-MSMS 210214_Eclipse_Hela_QC 921.938720703125 2 921.939427 1841.8643 1.0034 0.00092506 0.19433 0.00017916 1.1977 0.0011042 921.939491080031 59.975 0.54843 59.975 59.75 60.299 0 31 10 4 0 0 0 3.793E-05 1 63789 112.43 104.86 1 13476000 1315 1632 1206 1224 1542 1542 AIESLVK 7 Unmodified _AIESLVK_ 0 0 0 Q13485;Q12772 Q13485 Q13485 SMAD4;SREBF2 Mothers against decapentaplegic homolog 4;Sterol regulatory element-binding protein 2;Processed sterol regulatory element-binding protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 380.234191894531 2 380.234179 758.453805 0.10434 3.9672E-05 0.31423 0.00011948 0.41857 0.00015915 380.234252623059 30.549 1.245 30.549 29.678 30.923 0 54 24 4 0 0 0 0.041686 1 22492 50.539 2.4239 1 71658000 1316 1996 1207 1225 1543 1543 AIESMEQQLSELK 13 Unmodified _AIESMEQQLSELK_ 0 0 0 P12270 P12270 P12270 TPR Nucleoprotein TPR MULTI-MSMS 210214_Eclipse_Hela_QC 753.881286621094 2 753.379431 1504.74431 1.1362 0.00085603 0.33108 0.00024943 1.4673 0.0011055 753.379896985689 71.334 0.64808 71.334 70.919 71.567 0 37 12 4 0 0 0 7.2191E-09 1 79651 128.17 102.23 1 13535000 1317 849 1208 1226 1544 1544 AIETFSGK 8 Unmodified _AIETFSGK_ 0 0 0 Q9NZI8 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 426.726470947266 2 426.726718 851.438883 -0.73328 -0.00031291 0.49099 0.00020952 -0.24229 -0.00010339 426.726844233768 25.189 0.49745 25.189 24.815 25.313 0 15 9 2 0 0 0 0.021214 1 14277 52.716 22.531 1 9596000 1318 3763 1209 1227 1545 1545 AIETLIK 7 Unmodified _AIETLIK_ 0 0 0 Q9HCY8 Q9HCY8 Q9HCY8 S100A14 Protein S100-A14 MULTI-MSMS 210214_Eclipse_Hela_QC 394.249725341797 2 394.249829 786.485105 0.27211 0.00010728 -1.0881 -0.00042898 -0.81599 -0.00032171 394.249170832349 39.799 1.4087 39.799 39.302 40.711 0 48 28 3 0 0 0 0.020064 1 35274 64.803 7.3398 1 7941500 1319 3564 1210 1228 1546 1546 AIETQCYVVAAAQCGR 16 Unmodified _AIETQCYVVAAAQCGR_ 0 0 0 Q86X76 Q86X76 Q86X76 NIT1 Nitrilase homolog 1 MULTI-MSMS 210214_Eclipse_Hela_QC 899.427307128906 2 898.924545 1795.83454 1.3062 0.0011741 0.153 0.00013753 1.4592 0.0013117 898.924957601691 57.061 0.49689 57.061 56.815 57.312 0 29 9 4 0 0 0 2.9791E-08 1 59730 116.77 110.53 1 5412600 1320 2599 1211 1229 1547 1547 AIEVLSDEHAR 11 Unmodified _AIEVLSDEHAR_ 0 0 0 Q9HCS7 Q9HCS7 Q9HCS7 XAB2 Pre-mRNA-splicing factor SYF1 MULTI-MSMS 210214_Eclipse_Hela_QC 413.882568359375 3 413.882448 1238.62551 0.19913 8.2416E-05 -0.43776 -0.00018118 -0.23863 -9.8764E-05 413.882128140749 28.192 0.49725 28.192 27.94 28.437 0 20 9 3 0 0 0 0.055538 1 18927 16.472 8.0725 1 3219000 1321 3562 1212 1230 1548 1548 AIFAGYK 7 Unmodified _AIFAGYK_ 0 0 0 P18077 P18077 P18077 RPL35A 60S ribosomal protein L35a MULTI-MSMS 210214_Eclipse_Hela_QC 385.2158203125 2 385.215789 768.417025 0.11004 4.2388E-05 -0.15849 -6.1054E-05 -0.048455 -1.8666E-05 385.215679395266 35.378 1.1788 35.378 34.995 36.174 0 56 23 4 0 0 0 0.049386 1 28798 48.174 14.482 1 149400000 1322 948 1213 1231 1549 1549 AIFDTPDEDPNYNPLPEERPGGFAWGEGQR 30 Unmodified _AIFDTPDEDPNYNPLPEERPGGFAWGEGQR_ 0 0 1 Q9GZP9 Q9GZP9 Q9GZP9 DERL2 Derlin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 1125.85437011719 3 1125.51648 3373.5276 0.99172 0.0011162 -3.3318 -0.00375 -2.3401 -0.0026338 1125.8467624087 94.602 1.0392 94.602 93.936 94.975 0 35 20 2 0 0 0 1.4304E-08 1 112137 83.362 80.731 1 10318000 1323 3390 1214 1232 1550 1550 AIFENTLSTYPK 12 Unmodified _AIFENTLSTYPK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 692.864196777344 2 692.361367 1382.70818 0.63269 0.00043805 0.27275 0.00018884 0.90544 0.00062689 692.361527790731 64.006 0.54793 64.006 63.722 64.27 0 31 10 4 0 0 0 0.00027022 1 69445 81.338 74.747 1 10072000 1324 2102 1215 1233 1551 1551 AIFLAAQK 8 Unmodified _AIFLAAQK_ 0 0 0 Q9Y3B7 Q9Y3B7 Q9Y3B7 MRPL11 39S ribosomal protein L11, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 431.263458251953 2 431.263271 860.511988 -0.26421 -0.00011394 0.35283 0.00015216 0.088621 3.8219E-05 431.263346461115 38.354 0.69004 38.354 38.045 38.735 0 22 13 2 0 0 0 0.0095162 1 33298 67.741 40.62 1 5131100 1325 4052 1216 1234 1552 1552 AIFQTIQNR 9 Unmodified _AIFQTIQNR_ 0 0 0 O95373 O95373 O95373 IPO7 Importin-7 MULTI-MSMS 210214_Eclipse_Hela_QC 545.804382324219 2 545.803823 1089.59309 0.38849 0.00021204 0.12362 6.747E-05 0.5121 0.00027951 545.803845476489 42.472 0.89557 42.472 42.099 42.995 0 53 17 4 0 0 0 8.2096E-06 2 38905 138.24 100.08 1 74335000 1326 564 1217 1235 1553;1554 1554 AIFTGYYGK 9 Unmodified _AIFTGYYGK_ 0 0 0 P09543 P09543 P09543 CNP 2,3-cyclic-nucleotide 3-phosphodiesterase MULTI-MSMS 210214_Eclipse_Hela_QC 510.264251708984 2 510.263468 1018.51238 0.47684 0.00024331 0.15391 7.8534E-05 0.63074 0.00032185 510.263496631062 49.829 0.59389 49.829 49.585 50.179 0 29 11 3 0 0 0 0.043298 1 49538 38.16 9.6735 1 4670100 1327 778 1218 1236 1555 1555 AIFTTGQGASAVGLTAYVQR 20 Unmodified _AIFTTGQGASAVGLTAYVQR_ 0 0 0 P49736 P49736 P49736 MCM2 DNA replication licensing factor MCM2 MULTI-MSMS 210214_Eclipse_Hela_QC 1006.53796386719 2 1006.034 2010.05344 1.3499 0.001358 -0.79644 -0.00080124 0.55345 0.00055679 1006.53454544374 85.122 1.0937 85.122 84.401 85.494 0 58 21 4 0 0 0 5.4578E-22 2 98858 150.16 126.42 1 14943000 1328 1387 1219 1237 1556;1557 1557 AIFYINK 7 Unmodified _AIFYINK_ 0 0 0 CON__Q58D62 CON__Q58D62 CON__Q58D62 MULTI-MSMS 210214_Eclipse_Hela_QC 434.750396728516 2 434.749996 867.485439 0.21225 9.2277E-05 -0.26902 -0.00011696 -0.056764 -2.4678E-05 434.749865550431 48.143 1.6639 48.143 47.424 49.088 0 69 33 4 0 0 0 0.0064829 1 47080 91.093 52.101 1 55109000 + 1329 106 1220 1238 1558 1558 AIGDHFYK 8 Unmodified _AIGDHFYK_ 0 0 0 O15355 O15355 O15355 PPM1G Protein phosphatase 1G MULTI-MSMS 210214_Eclipse_Hela_QC 475.740112304688 2 475.74016 949.465767 0.067006 3.1878E-05 -0.02745 -1.3059E-05 0.039556 1.8819E-05 475.740182068595 25.786 0.54673 25.786 25.611 26.158 0 21 10 4 0 0 0 0.041245 1 15398 45.081 30.668 1 25949000 1330 264 1221 1239 1559 1559 AIGIEPSLATYHHIIR 16 Unmodified _AIGIEPSLATYHHIIR_ 0 0 0 Q96EY7 Q96EY7 Q96EY7 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 448.754272460938 4 448.503252 1789.9839 0.63039 0.00028273 -0.33334 -0.0001495 0.29705 0.00013323 448.753666200905 59.648 0.99463 59.648 59.005 59.999 0 40 19 3 0 0 0 0.043094 1 63546 21.233 21.233 1 6784700 1331 3022 1222 1240 1560 1560 AIGSASEGAQSSLQEVYHK 19 Unmodified _AIGSASEGAQSSLQEVYHK_ 0 0 0 P28066 P28066 P28066 PSMA5 Proteasome subunit alpha type-5 MULTI-MSMS 210214_Eclipse_Hela_QC 654.991394042969 3 654.656954 1960.94903 0.60691 0.00039732 0.04168 2.7286E-05 0.64859 0.0004246 654.65704203451 43.52 1.0453 43.52 43.095 44.141 0 90 20 6 0 0 0 4.835E-36 3 40399 135.27 125.31 1 282530000 1332 1082 1223 1241 1561;1562;1563 1562 AIGSASEGAQSSLQEVYHK 19 Unmodified _AIGSASEGAQSSLQEVYHK_ 0 0 0 P28066 P28066 P28066 PSMA5 Proteasome subunit alpha type-5 MULTI-MSMS 210214_Eclipse_Hela_QC 981.482116699219 2 981.481793 1960.94903 0.80708 0.00079213 -0.0039847 -3.9109E-06 0.80309 0.00078822 981.481921512006 43.519 0.59742 43.519 43.194 43.792 0 34 11 4 0 0 0 9.5981E-07 1 40569 99.531 83.393 1 11398000 1333 1082 1223 1241 1564 1564 AIGTAYAVLSNPEK 14 Unmodified _AIGTAYAVLSNPEK_ 0 0 0 Q9NXW2 Q9NXW2 Q9NXW2 DNAJB12 DnaJ homolog subfamily B member 12 MULTI-MSMS 210214_Eclipse_Hela_QC 717.3857421875 2 717.385374 1432.75619 0.64245 0.00046089 -1.9597 -0.0014059 -1.3173 -0.00094498 717.385668370248 58.646 0.34859 58.646 58.507 58.856 0 14 6 3 0 0 0 0.045841 1 62251 32.329 13.086 1 4334100 1334 3732 1224 1242 1565 1565 AIGTDEDLAHSSIR 14 Unmodified _AIGTDEDLAHSSIR_ 0 0 0 Q9Y697 Q9Y697 Q9Y697 NFS1 Cysteine desulfurase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 495.582855224609 3 495.582838 1483.72669 -0.16695 -8.2737E-05 0.71928 0.00035647 0.55234 0.00027373 495.583075100162 36.068 0.44101 36.068 35.832 36.273 0 16 8 2 0 0 0 3.2847E-05 1 29996 73.91 56.244 1 12455000 1335 4141 1225 1243 1566 1566 AIGTEPDSDVLSEIMHSFAK 20 Unmodified _AIGTEPDSDVLSEIMHSFAK_ 0 0 0 O00410 O00410 O00410 IPO5 Importin-5 MULTI-MSMS 210214_Eclipse_Hela_QC 716.684692382812 3 716.349021 2146.02524 1.8073 0.0012947 0.023821 1.7064E-05 1.8311 0.0013117 716.683337951026 106.74 0.4401 106.74 106.57 107.01 0 31 8 5 0 0 0 1.1613E-30 1 128917 166.36 146.54 1 226210000 1336 154 1226 1244 1567 1567 AIGTEPDTDVLSEIMNSFAK 20 Unmodified _AIGTEPDTDVLSEIMNSFAK_ 0 0 0 O60518 O60518 O60518 RANBP6 Ran-binding protein 6 MULTI-MSMS 210214_Eclipse_Hela_QC 1070.037109375 2 1069.51973 2137.0249 0.88437 0.00094585 -0.31529 -0.0003372 0.56908 0.00060864 1070.02181843347 109.77 0.29939 109.77 109.55 109.85 0 10 5 3 0 0 0 2.2164E-06 1 133067 85.42 73.806 1 9800700 1337 375 1227 1245 1568 1568 AIGVKPPR 8 Unmodified _AIGVKPPR_ 0 0 1 P55072 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase MULTI-MSMS 210214_Eclipse_Hela_QC 419.268707275391 2 419.268887 836.523222 -0.036483 -1.5296E-05 0.024393 1.0227E-05 -0.01209 -5.069E-06 419.26886728787 20.239 1.4434 20.239 19.319 20.762 0 66 28 4 0 0 0 0.046224 1 7643 96.666 52.055 1 48771000 1338 1531 1228 1246 1569 1569 AIGVLTSGGDAQGMNAAVR 19 Unmodified _AIGVLTSGGDAQGMNAAVR_ 0 0 0 P17858;Q01813 P17858;Q01813 Q01813 PFKL;PFKP ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase, platelet type MULTI-MSMS 210214_Eclipse_Hela_QC 894.958923339844 2 894.457067 1786.89958 1.5174 0.0013572 0.17387 0.00015552 1.6912 0.0015127 894.457265639513 60.478 0.6972 60.478 60.149 60.846 0 41 13 4 0 0 0 2.7268E-05 1 64348 110.31 93.392 1 38945000 1339 1821;942 1229 1247 1570 1570 AIHSWLTR 8 Unmodified _AIHSWLTR_ 0 0 0 P28070 P28070 P28070 PSMB4 Proteasome subunit beta type-4 MULTI-MSMS 210214_Eclipse_Hela_QC 492.274841308594 2 492.274701 982.534849 0.57635 0.00028372 0.36598 0.00018016 0.94233 0.00046389 492.274912242785 30.001 1.1439 30.001 29.43 30.573 0 44 22 3 0 0 0 0.0010977 1 21351 113.91 79.097 1 28773000 1340 1083 1230 1248 1571 1571 AIHTAPVATMAFDPTSTLLATGGCDGAVR 29 Unmodified _AIHTAPVATMAFDPTSTLLATGGCDGAVR_ 0 0 0 Q12788 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 968.148986816406 3 967.812631 2900.41606 1.6078 0.0015561 -0.52843 -0.00051143 1.0794 0.0010446 968.48010496949 94.013 0.64658 94.013 93.687 94.334 0 61 12 7 0 0 0 1.1281E-23 1 111316 126.59 114.16 1 17777000 1341 1908 1231 1249 1572 1572 AIHVLDVEQGQLER 14 Unmodified _AIHVLDVEQGQLER_ 0 0 0 Q9H6Y2 Q9H6Y2 Q9H6Y2 WDR55 WD repeat-containing protein 55 MULTI-MSMS 210214_Eclipse_Hela_QC 536.289855957031 3 536.289766 1605.84747 1.2865 0.00068992 0.28776 0.00015432 1.5742 0.00084425 536.290039588965 53.979 0.3983 53.979 53.79 54.188 0 17 7 3 0 0 0 0.011499 1 55455 35.657 15.818 1 5264600 1342 3491 1232 1250 1573 1573 AIIASNIMYIVGQYPR 16 Unmodified _AIIASNIMYIVGQYPR_ 0 0 0 O14980 O14980 O14980 XPO1 Exportin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 904.992004394531 2 904.990014 1807.96548 1.4902 0.0013486 0.18081 0.00016363 1.671 0.0015123 905.491639747077 105.35 0.29881 105.35 105.23 105.53 0 20 5 5 0 0 0 1.5189E-31 1 127018 227.37 218.97 1 35764000 1343 229 1233 1251 1574 1574 AIIDGAVR 8 Unmodified _AIIDGAVR_ 0 0 0 REV__Q6NSI4 REV__Q6NSI4 MULTI-MSMS 210214_Eclipse_Hela_QC 407.742706298828 2 407.742702 813.470852 -0.092792 -3.7835E-05 -2.2273 -0.00090818 -2.3201 -0.00094601 407.742623255721 46.813 0.64668 46.813 46.478 47.125 0 29 12 4 0 0 0 0.04219 1 45203 44.721 11.363 1 5355600 + 1344 4183 1234 1252 1575 1575 AIIEEYLHLNDMK 13 Unmodified _AIIEEYLHLNDMK_ 0 0 0 Q04637 Q04637 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 MULTI-MSMS 210214_Eclipse_Hela_QC 530.607116699219 3 530.272836 1587.79668 0.99952 0.00053002 -0.17946 -9.5162E-05 0.82006 0.00043486 530.272827784651 79.214 0.84583 79.214 78.816 79.662 0 55 16 5 0 0 0 8.5276E-05 1 90633 84.169 79.09 1 22629000 1345 1847 1235 1253 1576 1576 AIIEEYLHLNDMK 13 Unmodified _AIIEEYLHLNDMK_ 0 0 0 Q04637 Q04637 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 MULTI-MSMS 210214_Eclipse_Hela_QC 795.408142089844 2 794.905616 1587.79668 1.7886 0.0014217 0.19523 0.00015519 1.9838 0.0015769 794.905739506232 79.23 0.74631 79.23 78.717 79.463 0 27 14 3 0 0 0 0.001771 1 90655 53.683 47.837 1 6276700 1346 1847 1235 1253 1577 1577 AIIIFVPVPQLK 12 Unmodified _AIIIFVPVPQLK_ 0 0 0 P62081 P62081 P62081 RPS7 40S ribosomal protein S7 MULTI-MSMS 210214_Eclipse_Hela_QC 669.43212890625 2 669.431399 1336.84824 1.0264 0.00068713 0.031717 2.1232E-05 1.0582 0.00070836 669.431344961438 106.5 0.49045 106.5 106.32 106.81 0 25 9 5 0 0 0 3.1672E-08 1 128580 127.56 127.56 1 197020000 1347 1638 1236 1254 1578 1578 AIILAAAPGEK 11 Unmodified _AIILAAAPGEK_ 0 0 0 P26358 P26358 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 527.319274902344 2 527.318774 1052.623 0.19829 0.00010456 0.15799 8.3312E-05 0.35628 0.00018787 527.318734261355 46.553 0.6964 46.553 46.28 46.976 0 22 13 2 0 0 0 0.0020479 1 44885 64.04 59.284 1 8033300 1348 1056 1237 1255 1579 1579 AIIPSHLAYGK 11 Unmodified _AIIPSHLAYGK_ 0 0 0 Q9NYL4 Q9NYL4 Q9NYL4 FKBP11 Peptidyl-prolyl cis-trans isomerase FKBP11 MULTI-MSMS 210214_Eclipse_Hela_QC 390.560821533203 3 390.560758 1168.66044 0.59174 0.00023111 -0.57602 -0.00022497 0.015722 6.1404E-06 390.560624930432 41.775 0.89174 41.775 41.407 42.298 0 43 17 4 0 0 0 0.0017662 1 37950 55.314 40.635 1 16425000 1349 3746 1238 1256 1580 1580 AILCAIQNLEER 12 Unmodified _AILCAIQNLEER_ 0 0 0 Q9NU22 Q9NU22 Q9NU22 MDN1 Midasin MULTI-MSMS 210214_Eclipse_Hela_QC 715.377868652344 2 715.377026 1428.7395 1.3944 0.00099749 1.2311 0.00088073 2.6255 0.0018782 715.377893566982 74.529 0.54581 74.529 74.158 74.704 0 15 10 2 0 0 0 0.02323 1 84315 37.344 20.673 1 2000900 1350 3654 1239 1257 1581 1581 AILCLLLGGVER 12 Unmodified _AILCLLLGGVER_ 0 0 0 P25205 P25205 P25205 MCM3 DNA replication licensing factor MCM3 MULTI-MSMS 210214_Eclipse_Hela_QC 657.885620117188 2 657.384122 1312.75369 1.0233 0.00067268 -0.053479 -3.5156E-05 0.96978 0.00063752 657.384127401703 104.21 0.64677 104.21 103.88 104.53 0 26 12 3 0 0 0 0.00019041 1 125338 86.624 49.931 1 2672900 1351 1040 1240 1258 1582 1582 AILEQNFR 8 Unmodified _AILEQNFR_ 0 0 0 Q14134 Q14134 Q14134 TRIM29 Tripartite motif-containing protein 29 MULTI-MSMS 210214_Eclipse_Hela_QC 495.772277832031 2 495.771991 989.529429 0.20873 0.00010348 2.2614 0.0011211 2.4701 0.0012246 495.771702883213 40.519 0.99442 40.519 39.716 40.711 0 42 19 3 0 0 0 0.0033594 1 36443 88.643 53.926 1 10849000 1352 2053 1241 1259 1583 1583 AILFLPMSAK 10 Unmodified _AILFLPMSAK_ 0 0 0 P09038 P09038 P09038 FGF2 Fibroblast growth factor 2 MULTI-MSMS 210214_Eclipse_Hela_QC 545.820495605469 2 545.820095 1089.62564 0.92625 0.00050557 -0.21721 -0.00011856 0.70904 0.00038701 545.819994613096 85.583 0.4963 85.583 85.395 85.891 0 25 9 3 0 0 0 0.0056234 1 99634 56.258 56.258 1 3098300 1353 766 1242 1260 1584 1584 AILGSVER 8 Unmodified _AILGSVER_ 0 0 0 P26639;A2RTX5 P26639 P26639 TARS;TARSL2 Threonine--tRNA ligase, cytoplasmic;Probable threonine--tRNA ligase 2, cytoplasmic MULTI-MSMS 210214_Eclipse_Hela_QC 422.747924804688 2 422.747985 843.481417 0.13429 5.677E-05 0.60249 0.0002547 0.73678 0.00031147 422.748264459974 30.798 1.0963 30.798 30.325 31.421 0 45 21 4 0 0 0 0.00019503 1 22423 139.28 47.695 1 85554000 1354 1063 1243 1261 1585 1585 AILILDNDGDR 11 Unmodified _AILILDNDGDR_ 0 0 0 P61923 P61923 P61923 COPZ1 Coatomer subunit zeta-1 MULTI-MSMS 210214_Eclipse_Hela_QC 607.82275390625 2 607.822409 1213.63027 0.19419 0.00011804 0.19382 0.00011781 0.38802 0.00023584 607.822470041028 61.716 0.7462 61.716 61.243 61.989 0 30 14 3 0 0 0 2.5052E-05 1 66210 109.11 94.953 1 19973000 1355 1627 1244 1262 1586 1586 AILLLQTAEDQDTYNVAIR 19 Unmodified _AILLLQTAEDQDTYNVAIR_ 0 0 0 Q6PGP7 Q6PGP7 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 MULTI-MSMS 210214_Eclipse_Hela_QC 1074.57470703125 2 1074.07078 2146.127 1.0645 0.0011434 0.33508 0.0003599 1.3996 0.0015033 1074.57272694061 96.944 0.44772 96.944 96.721 97.168 0 14 8 2 0 0 0 0.0029515 1 115399 54.7 47.155 1 2114100 1356 2459 1245 1263 1587 1587 AILNGIDSINK 11 Unmodified _AILNGIDSINK_ 0 0 0 Q9UQE7 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 579.329345703125 2 579.32987 1156.64519 0.6728 0.00038977 -1.2393 -0.00071794 -0.56646 -0.00032817 579.329448289055 56.515 1.0457 56.515 55.77 56.815 0 34 20 3 0 0 0 0.00013434 1 59004 96.331 57.369 1 10371000 1357 3980 1246 1264 1588 1588 AILPCIK 7 Unmodified _AILPCIK_ 0 0 0 P60842 P60842 P60842 EIF4A1 Eukaryotic initiation factor 4A-I MULTI-MSMS 210214_Eclipse_Hela_QC 407.746185302734 2 407.746399 813.478245 0.15555 6.3427E-05 0.30633 0.0001249 0.46188 0.00018833 407.746528144448 49.708 1.042 49.708 49.088 50.13 0 57 20 4 0 0 0 0.040066 1 49871 51.036 0 1 66254000 1358 1583 1247 1265 1589 1589 AILPCQDTPSVK 12 Unmodified _AILPCQDTPSVK_ 0 0 0 P09960 P09960 P09960 LTA4H Leukotriene A-4 hydrolase MSMS 210214_Eclipse_Hela_QC 664.848327636719 2 664.84757 1327.68059 NaN NaN NaN NaN NaN NaN NaN 46.174 1 46.174 45.674 46.674 0 0 0 0 0.00012319 1 44432 105.2 78.065 1 1359 786 1248 1266 1590 1590 AILQATLR 8 Unmodified _AILQATLR_ 0 0 0 Q12904 Q12904 Q12904 AIMP1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 MULTI-MSMS 210214_Eclipse_Hela_QC 443.279449462891 2 443.279452 884.544351 0.33779 0.00014974 -0.041955 -1.8598E-05 0.29584 0.00013114 443.279456816207 42.087 0.84223 42.087 41.755 42.597 0 33 16 3 0 0 0 0.043775 1 38487 44.117 1.6423 1 27767000 1360 1920 1249 1267 1591 1591 AILQENGCLSDSDMFSQAGLR 21 Unmodified _AILQENGCLSDSDMFSQAGLR_ 0 0 0 P42704 P42704 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1156.53637695312 2 1156.53592 2311.05728 1.1952 0.0013823 0.057456 6.645E-05 1.2526 0.0014487 1157.03757407023 88.658 0.58975 88.658 88.325 88.914 0 53 11 6 0 0 0 2.7645E-14 1 103679 164.81 157.75 1 28670000 1361 1278 1250 1268 1592 1592 AILQHLGLESTCDDSIIVK 19 Unmodified _AILQHLGLESTCDDSIIVK_ 0 0 0 P52789 P52789 P52789 HK2 Hexokinase-2 MULTI-MSMS 210214_Eclipse_Hela_QC 705.041198730469 3 704.705028 2111.09326 1.1189 0.00078851 -0.6551 -0.00046165 0.46382 0.00032686 705.371558467057 77.884 0.69759 77.884 77.572 78.269 0 35 13 5 0 0 0 0.023694 1 88901 19.42 9.0439 1 5350100 1362 1483 1251 1269 1593 1593 AILSNEATK 9 Unmodified _AILSNEATK_ 0 0 0 A0AVT1 A0AVT1 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 MULTI-MSMS 210214_Eclipse_Hela_QC 473.763610839844 2 473.763832 945.513111 0.10356 4.9063E-05 0.44402 0.00021036 0.54758 0.00025942 473.763803987252 22.918 0.64775 22.918 22.553 23.201 0 36 12 5 0 0 0 0.042987 1 11041 38.302 19.52 1 23482000 1363 5 1252 1270 1594 1594 AILSTKPPGTFLLR 14 Unmodified _AILSTKPPGTFLLR_ 0 0 1 P40763 P40763 P40763 STAT3 Signal transducer and activator of transcription 3 MULTI-MSMS 210214_Eclipse_Hela_QC 505.308502197266 3 505.30821 1512.9028 -0.12504 -6.3184E-05 0.4177 0.00021106 0.29266 0.00014788 505.308445287928 68.801 0.67308 68.801 68.604 69.277 0 32 13 3 0 0 0 0.017737 1 76309 37.998 29.657 1 5940900 1364 1244 1253 1271 1595 1595 AILTAAIVDADR 12 Unmodified _AILTAAIVDADR_ 0 0 0 Q9Y5S2 Q9Y5S2 Q9Y5S2 CDC42BPB Serine/threonine-protein kinase MRCK beta MULTI-MSMS 210214_Eclipse_Hela_QC 614.848571777344 2 614.848427 1227.6823 0.72657 0.00044673 -3.0269 -0.0018611 -2.3003 -0.0014143 615.34748208956 68.48 0.59644 68.48 68.107 68.704 0 23 11 3 0 0 0 0.014772 1 75705 43.77 15.371 1 4967400 1365 4122 1254 1272 1596 1596 AILTMTQLYK 10 Unmodified _AILTMTQLYK_ 0 0 0 Q92797 Q92797 Q92797 SYMPK Symplekin MULTI-MSMS 210214_Eclipse_Hela_QC 591.835693359375 2 591.333567 1180.65258 1.0577 0.00062545 -0.12812 -7.5762E-05 0.92957 0.00054969 591.333328488065 69.85 0.59693 69.85 69.626 70.223 0 17 11 2 0 0 0 0.030662 1 77844 40.352 24.149 1 2674200 1366 2909 1255 1273 1597 1597 AILVDLEPGTMDSVR 15 Unmodified _AILVDLEPGTMDSVR_ 0 0 0 P07437;Q9BVA1;Q13885;Q13509 P07437;Q9BVA1;Q13509 P07437 TUBB;TUBB2B;TUBB2A;TUBB3 Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-3 chain MULTI-MSMS 210214_Eclipse_Hela_QC 808.422790527344 2 808.42163 1614.82871 1.1012 0.00089026 -0.66089 -0.00053428 0.44034 0.00035598 808.421485055308 86.066 1.5902 86.066 85.594 87.184 0 111 31 7 0 0 0 1.0589E-10 2 99961 158.3 112.77 1 864660000 1367 722;2039;2001 1256 1274 1598;1599 1598 AILVDLEPGTMDSVR 15 Oxidation (M) _AILVDLEPGTM(Oxidation (M))DSVR_ AILVDLEPGTM(1)DSVR AILVDLEPGTM(110)DSVR 0 1 0 P07437;Q9BVA1;Q13885;Q13509 P07437;Q9BVA1;Q13509 P07437 TUBB;TUBB2B;TUBB2A;TUBB3 Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-3 chain MULTI-MSMS 210214_Eclipse_Hela_QC 816.418579101562 2 816.419088 1630.82362 1.2175 0.00099398 -0.082382 -6.7258E-05 1.1351 0.00092672 816.41915385696 86.066 0.89482 86.066 85.693 86.588 0 60 17 5 0 0 0 1.2396E-06 2 100168 106.67 71.975 1 38768000 1368 722;2039;2001 1256 1275 1600;1601 1600 137 AILVVFANK 9 Unmodified _AILVVFANK_ 0 0 0 P40616 P40616 P40616 ARL1 ADP-ribosylation factor-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 487.804809570312 2 487.805303 973.596052 0.43135 0.00021042 -0.089137 -4.3481E-05 0.34222 0.00016694 487.805180063443 66.427 0.94559 66.427 65.751 66.697 0 29 18 3 0 0 0 0.043358 1 73185 38.133 20.285 1 2646100 1369 1242 1257 1276 1602 1602 AILYLNTGYQR 11 Unmodified _AILYLNTGYQR_ 0 0 0 CON__ENSEMBL:ENSBTAP00000024146 CON__ENSEMBL:ENSBTAP00000024146 CON__ENSEMBL:ENSBTAP00000024146 MULTI-MSMS 210214_Eclipse_Hela_QC 656.356750488281 2 656.356419 1310.69829 0.2319 0.00015221 0.42057 0.00027604 0.65247 0.00042825 656.356723064731 61.616 0.64699 61.616 61.293 61.94 0 31 12 3 0 0 0 1.7191E-05 1 66071 111.95 92.16 1 18442000 + 1370 38 1258 1277 1603 1603 AILYNYR 7 Unmodified _AILYNYR_ 0 0 0 CON__Q2UVX4 CON__Q2UVX4 CON__Q2UVX4 MULTI-MSMS 210214_Eclipse_Hela_QC 456.750701904297 2 456.750527 911.486502 -0.027303 -1.2471E-05 0.56719 0.00025906 0.53989 0.00024659 456.750654736413 39.035 0.78968 39.035 38.636 39.426 0 36 16 3 0 0 0 0.0028958 1 34062 113.07 63.861 1 33781000 + 1371 92 1259 1278 1604 1604 AIMEMPSFYSHGLPR 15 Unmodified _AIMEMPSFYSHGLPR_ 0 0 0 P55265 P55265 P55265 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-MSMS 210214_Eclipse_Hela_QC 579.621215820312 3 579.281337 1734.82218 0.46561 0.00026972 0.76262 0.00044177 1.2282 0.00071149 579.616367535374 75.197 0.89748 75.197 74.803 75.701 0 52 17 4 0 0 0 0.00015195 2 85106 66.797 48.701 1 14875000 1372 1540 1260 1279 1605;1606 1606 AIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNR 34 Unmodified _AIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNR_ 0 0 0 P24752 P24752 P24752 ACAT1 Acetyl-CoA acetyltransferase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1245.55407714844 3 1244.88024 3731.6189 2.7434 0.0034152 -0.55778 -0.00069437 2.1856 0.0027209 1245.54813596657 101.38 0.59695 101.38 101.05 101.64 0 43 11 6 0 0 0 0.028086 1 121508 17.606 12.55 1 2525200 1373 1037 1261 1280 1607 1607 AIMTYVSSFYHAFSGAQK 18 Unmodified _AIMTYVSSFYHAFSGAQK_ 0 0 0 P12814;O43707 P12814;O43707 O43707 ACTN1;ACTN4 Alpha-actinin-1;Alpha-actinin-4 MULTI-MSMS 210214_Eclipse_Hela_QC 669.994262695312 3 669.992621 2006.95603 1.4173 0.00094961 -0.72829 -0.00048795 0.68905 0.00046166 669.992121782563 94.97 0.69611 94.97 94.627 95.323 0 45 13 5 0 0 0 0.032667 1 112474 23.87 19.627 1 7838300 1374 329;853 1262 1281 1608 1608 AIMYEETTYSK 11 Unmodified _AIMYEETTYSK_ 0 0 0 P52701 P52701 P52701 MSH6 DNA mismatch repair protein Msh6 MULTI-MSMS 210214_Eclipse_Hela_QC 668.311096191406 2 668.310486 1334.60642 0.75608 0.0005053 1.5887 0.0010617 2.3448 0.001567 668.31255438112 40.136 0.89489 40.136 39.766 40.661 0 35 17 4 0 0 0 0.00046741 1 35875 81.338 68.548 1 18739000 1375 1477 1263 1282 1609 1609 AINCATSGVVGLVNCLR 17 Unmodified _AINCATSGVVGLVNCLR_ 0 0 0 P49327 P49327 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 210214_Eclipse_Hela_QC 902.966674804688 2 902.463838 1802.91312 0.93608 0.00084478 -0.23299 -0.00021027 0.70309 0.00063451 902.464109508933 86.736 0.74519 86.736 86.389 87.134 0 56 14 5 0 0 0 8.5978E-08 1 100992 110.08 94.187 1 27179000 1376 1365 1264 1283 1610 1610 AINFNFGYAK 10 Unmodified _AINFNFGYAK_ 0 0 0 P47897 P47897 P47897 QARS Glutamine--tRNA ligase MULTI-MSMS 210214_Eclipse_Hela_QC 572.7939453125 2 572.792924 1143.57129 0.93895 0.00053782 0.023793 1.3629E-05 0.96274 0.00055145 572.793047351213 68.132 0.99405 68.132 67.759 68.753 0 38 19 3 0 0 0 0.00047246 1 75150 86.794 74.004 1 15540000 1377 1331 1265 1284 1611 1611 AINPINTFTK 10 Unmodified _AINPINTFTK_ 0 0 0 Q07960 Q07960 Q07960 ARHGAP1 Rho GTPase-activating protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 559.814147949219 2 559.813856 1117.61316 0.96775 0.00054176 0.035381 1.9807E-05 1.0031 0.00056157 559.813859760951 54.377 0.63673 54.377 54.088 54.725 0 30 12 3 0 0 0 0.00064199 1 55936 83.948 59.025 1 16118000 1378 1880 1266 1285 1612 1612 AINQGGLTSVAVR 13 Unmodified _AINQGGLTSVAVR_ 0 0 0 P60900 P60900 P60900 PSMA6 Proteasome subunit alpha type-6 MULTI-MSMS 210214_Eclipse_Hela_QC 643.365234375 2 643.364776 1284.715 0.92341 0.00059409 0.20391 0.00013119 1.1273 0.00072528 643.364936737115 45.11 0.84584 45.11 44.786 45.632 0 57 16 5 0 0 0 8.8211E-09 1 42710 150.1 117.26 1 142920000 1379 1586 1267 1286 1613 1613 AINQIAAALFTIHK 14 Unmodified _AINQIAAALFTIHK_ 0 0 0 Q9Y2A7 Q9Y2A7 Q9Y2A7 NCKAP1 Nck-associated protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 504.295440673828 3 504.296192 1509.86675 0.66042 0.00033305 -0.38697 -0.00019515 0.27345 0.0001379 504.295927533898 87.06 0.54651 87.06 86.737 87.284 0 27 10 3 0 0 0 0.056152 1 101591 13.418 8.8702 1 3384700 1380 4001 1268 1287 1614 1614 AINQQTGAFVEISR 14 Unmodified _AINQQTGAFVEISR_ 0 0 0 Q92945 Q92945 Q92945 KHSRP Far upstream element-binding protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 767.403869628906 2 767.404629 1532.79471 1.3115 0.0010065 -0.0096385 -7.3966E-06 1.3019 0.00099908 767.404561838822 55.846 0.99562 55.846 55.521 56.517 0 58 19 4 0 0 0 7.8992E-05 1 57941 86.911 61.289 1 41878000 1381 2925 1269 1288 1615 1615 AINTFFAK 8 Unmodified _AINTFFAK_ 0 0 0 Q71RC2 Q71RC2 Q71RC2 LARP4 La-related protein 4 MULTI-MSMS 210214_Eclipse_Hela_QC 456.252960205078 2 456.252903 910.491253 0.33995 0.0001551 0.4867 0.00022206 0.82664 0.00037716 456.2530414885 49.205 0.54794 49.205 48.888 49.436 0 16 10 2 0 0 0 0.007794 1 48757 71.141 58.093 1 2526000 1382 2503 1270 1289 1616 1616 AINVLLEGNPDTHSWEMVGK 20 Unmodified _AINVLLEGNPDTHSWEMVGK_ 0 0 0 Q14157 Q14157 Q14157 UBAP2L Ubiquitin-associated protein 2-like MULTI-MSMS 210214_Eclipse_Hela_QC 737.704711914062 3 737.368527 2209.08375 0.080975 5.9708E-05 0.21903 0.0001615 0.3 0.00022121 737.368533983912 82.436 0.71011 82.436 82.047 82.757 0 30 15 3 0 0 0 0.02674 1 95056 24.679 2.8759 1 18520000 1383 2061 1271 1290 1617 1617 AIPDLTAPVAAVQAAVSNLVR 21 Unmodified _AIPDLTAPVAAVQAAVSNLVR_ 0 0 0 P18206 P18206 P18206 VCL Vinculin MULTI-MSMS 210214_Eclipse_Hela_QC 1039.09680175781 2 1038.59422 2075.17389 1.9268 0.0020012 0.50643 0.00052597 2.4332 0.0025271 1039.09615266828 110.62 0.59811 110.62 110.4 111 0 42 11 6 0 0 0 1.9709E-20 1 134185 179.56 170.27 1 73623000 1384 952 1272 1291 1618 1618 AIPDLTAPVAAVQAAVSNLVR 21 Unmodified _AIPDLTAPVAAVQAAVSNLVR_ 0 0 0 P18206 P18206 P18206 VCL Vinculin MULTI-MSMS 210214_Eclipse_Hela_QC 693.066711425781 3 692.731906 2075.17389 1.8191 0.0012601 0.22484 0.00015575 2.0439 0.0014159 692.732415704101 110.63 0.29951 110.63 110.45 110.75 0 19 5 5 0 0 0 0.00081636 1 134276 42.64 32.718 1 4115900 1385 952 1272 1291 1619 1619 AIPMLVDVLQDTR 13 Unmodified _AIPMLVDVLQDTR_ 0 0 0 Q9BU89 Q9BU89 Q9BU89 DOHH Deoxyhypusine hydroxylase MULTI-MSMS 210214_Eclipse_Hela_QC 735.904602050781 2 735.902876 1469.7912 1.4874 0.0010946 0.0079527 5.8524E-06 1.4953 0.0011004 735.902857361272 105 0.49937 105 104.73 105.23 0 24 9 4 0 0 0 0.0011505 2 126475 73.781 59.546 1 9815300 1386 3284 1273 1292 1620;1621 1620 AIPNNQVLGK 10 Unmodified _AIPNNQVLGK_ 0 0 0 O60869 O60869 O60869 EDF1 Endothelial differentiation-related factor 1 MULTI-MSMS 210214_Eclipse_Hela_QC 527.807739257812 2 527.306198 1052.59784 0.066051 3.4829E-05 -0.042262 -2.2285E-05 0.023789 1.2544E-05 527.306232077536 29.307 0.88354 29.307 28.894 29.778 0 51 17 4 0 0 0 0.0060934 1 20124 54.611 34.091 1 35768000 1387 402 1274 1293 1622 1622 AIPNQGEILVIR 12 Unmodified _AIPNQGEILVIR_ 0 0 0 P50570 P50570 P50570 DNM2 Dynamin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 661.894104003906 2 661.893169 1321.77178 0.73552 0.00048684 -0.31175 -0.00020635 0.42377 0.00028049 661.8929719199 69.49 0.54784 69.49 69.228 69.776 0 26 10 3 0 0 0 0.017724 1 77124 41.399 30.248 1 4891500 1388 1419 1275 1294 1623 1623 AIPQLQGYLR 10 Unmodified _AIPQLQGYLR_ 0 0 0 Q02878 Q02878 Q02878 RPL6 60S ribosomal protein L6 MULTI-MSMS 210214_Eclipse_Hela_QC 579.835144042969 2 579.835123 1157.65569 0.57746 0.00033483 0.10724 6.218E-05 0.6847 0.00039701 579.83520796359 68.728 1.4695 68.728 68.256 69.726 0 86 29 5 0 0 0 0.00046925 3 75755 86.953 62.059 1 238720000 1389 1834 1276 1295 1624;1625;1626 1624 AIPTVNHSGTFSPQAPVPTTVPVVDVR 27 Unmodified _AIPTVNHSGTFSPQAPVPTTVPVVDVR_ 0 0 0 Q16513 Q16513 Q16513 PKN2 Serine/threonine-protein kinase N2 MULTI-MSMS 210214_Eclipse_Hela_QC 930.168212890625 3 929.499369 2785.47628 0.96868 0.00090038 0.23049 0.00021424 1.1992 0.0011146 930.168241782783 83.02 0.54817 83.02 82.757 83.306 0 28 10 3 0 0 0 0.041749 1 96040 15.888 12.846 1 8576800 1390 2228 1277 1296 1627 1627 AIPVSPSAVEEDEDEDGHTVVATAR 25 Unmodified _AIPVSPSAVEEDEDEDGHTVVATAR_ 0 0 0 Q07157 Q07157 Q07157 TJP1 Tight junction protein ZO-1 MULTI-MSMS 210214_Eclipse_Hela_QC 865.749450683594 3 865.412066 2593.21437 0.93242 0.00080693 0.11921 0.00010316 1.0516 0.00091009 865.74662421103 61.318 0.49703 61.318 61.094 61.591 0 30 9 4 0 0 0 0.012418 1 65803 29.47 27.157 1 7233200 1391 1874 1278 1297 1628 1628 AIQCVNNVVVDGR 13 Unmodified _AIQCVNNVVVDGR_ 0 0 0 O95628 O95628 O95628 CNOT4 CCR4-NOT transcription complex subunit 4 MULTI-MSMS 210214_Eclipse_Hela_QC 722.372680664062 2 722.372275 1442.73 0.85092 0.00061468 0.17162 0.00012397 1.0225 0.00073865 722.873822730927 44.389 0.34706 44.389 44.19 44.537 0 15 6 3 0 0 0 0.00019533 2 41922 79.693 59.931 1 2906000 1392 584 1279 1298 1629;1630 1630 AIQDAILEVLK 11 Unmodified _AIQDAILEVLK_ 0 0 0 Q86Y56 Q86Y56 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal MULTI-MSMS 210214_Eclipse_Hela_QC 606.864440917969 2 606.863546 1211.71254 0.8797 0.00053386 0.10573 6.4165E-05 0.98544 0.00059803 606.863656028887 103.86 0.7464 103.86 103.43 104.18 0 36 14 3 0 0 0 0.00022544 1 124712 90.629 69.122 1 4369200 1393 2606 1280 1299 1631 1631 AIQDHLLEVEQSK 13 Unmodified _AIQDHLLEVEQSK_ 0 0 0 P12270 P12270 P12270 TPR Nucleoprotein TPR MULTI-MSMS 210214_Eclipse_Hela_QC 755.399597167969 2 755.399012 1508.78347 0.82237 0.00062122 -0.12806 -9.6736E-05 0.69431 0.00052448 755.398623149498 48.155 0.43716 48.155 47.971 48.408 0 17 8 3 0 0 0 7.9534E-05 2 47278 107.18 98.221 1 2839000 1394 849 1281 1300 1632;1633 1633 AIQDPAFSDGIR 12 Unmodified _AIQDPAFSDGIR_ 0 0 0 Q7Z6Z7 Q7Z6Z7 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 MSMS 210214_Eclipse_Hela_QC 645.328552246094 2 645.327859 1288.64116 NaN NaN NaN NaN NaN NaN NaN 53.82 1 53.82 53.32 54.32 0 0 0 0 0.028666 1 55223 47.894 24.574 1 1395 2557 1282 1301 1634 1634 AIQGGTSHHLGQNFSK 16 Unmodified _AIQGGTSHHLGQNFSK_ 0 0 0 P07814 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 210214_Eclipse_Hela_QC 561.285400390625 3 561.285015 1680.83322 0.35886 0.00020142 0.30799 0.00017287 0.66685 0.00037429 561.285071222435 20.489 0.5481 20.489 20.264 20.812 0 28 10 4 0 0 0 2.0796E-11 2 7739 103.61 92.839 1 70846000 1396 728 1283 1302 1635;1636 1636 AIQGGTSHHLGQNFSK 16 Unmodified _AIQGGTSHHLGQNFSK_ 0 0 0 P07814 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 210214_Eclipse_Hela_QC 841.425659179688 2 841.423884 1680.83322 0.86063 0.00072415 0.033925 2.8545E-05 0.89455 0.0007527 841.423943984504 20.489 0.34863 20.489 20.314 20.663 0 22 6 5 0 0 0 7.2205E-31 1 7761 170.95 150.82 1 22168000 1397 728 1283 1302 1637 1637 AIQGGTSHHLGQNFSK 16 Unmodified _AIQGGTSHHLGQNFSK_ 0 0 0 P07814 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase MULTI-MSMS 210214_Eclipse_Hela_QC 421.215362548828 4 421.21558 1680.83322 0.020556 8.6583E-06 -0.34682 -0.00014609 -0.32627 -0.00013743 421.215495527646 20.489 0.24887 20.489 20.364 20.613 0 12 4 4 0 0 0 0.040635 1 7813 15.155 11.053 1 8410200 1398 728 1283 1302 1638 1638 AIQINPAFADAHSNLASIHK 20 Unmodified _AIQINPAFADAHSNLASIHK_ 0 0 0 O15294 O15294 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit MULTI-MSMS 210214_Eclipse_Hela_QC 530.784973144531 4 530.282723 2117.10179 0.38138 0.00020224 0.42837 0.00022715 0.80974 0.00042939 530.533581065397 58.714 0.5969 58.714 58.408 59.005 0 33 11 4 0 0 0 0.00071536 2 62037 45.347 37.414 1 11871000 1399 259 1284 1303 1639;1640 1639 AIQLNPSYIR 10 Unmodified _AIQLNPSYIR_ 0 0 0 Q99614 Q99614 Q99614 TTC1 Tetratricopeptide repeat protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 587.833129882812 2 587.83258 1173.65061 0.986 0.0005796 -0.13195 -7.7563E-05 0.85405 0.00050204 587.83248091267 57.736 0.49776 57.736 57.462 57.96 0 29 9 4 0 0 0 0.0045263 1 60608 73.665 73.665 1 13037000 1400 3177 1285 1304 1641 1641 AIQLNSNSVQALLLK 15 Unmodified _AIQLNSNSVQALLLK_ 0 0 0 Q9UJX3 Q9UJX3 Q9UJX3 ANAPC7 Anaphase-promoting complex subunit 7 MULTI-MSMS 210214_Eclipse_Hela_QC 806.976623535156 2 806.475054 1610.93556 1.3768 0.0011104 0.27479 0.00022161 1.6516 0.001332 806.475269055688 92.32 0.44835 92.32 92.046 92.494 0 24 8 4 0 0 0 0.001709 1 108801 52.247 37.275 1 6901200 1401 3899 1286 1305 1642 1642 AIQLSGAEQLEALK 14 Unmodified _AIQLSGAEQLEALK_ 0 0 0 Q9BT78 Q9BT78 Q9BT78 COPS4 COP9 signalosome complex subunit 4 MULTI-MSMS 210214_Eclipse_Hela_QC 735.913757324219 2 735.911756 1469.80896 1.1003 0.0008097 0.22681 0.00016691 1.3271 0.00097661 735.911814404993 73.413 0.59793 73.413 73.11 73.708 0 36 11 4 0 0 0 5.9563E-14 1 82672 143.79 110.6 1 15020000 1402 3266 1287 1306 1643 1643 AIQTGEELFFDYR 13 Unmodified _AIQTGEELFFDYR_ 0 0 0 Q15910 Q15910 Q15910 EZH2 Histone-lysine N-methyltransferase EZH2 MULTI-MSMS 210214_Eclipse_Hela_QC 795.385375976562 2 794.885738 1587.75692 1.373 0.0010914 -0.42981 -0.00034165 0.94317 0.00074971 795.386741765264 87.088 1.4415 87.088 86.489 87.93 0 39 28 2 0 0 0 0.046304 1 101670 33.057 15.193 1 11837000 1403 2221 1288 1307 1644 1644 AIQTLGYFPVGDGDFPHQK 19 Unmodified _AIQTLGYFPVGDGDFPHQK_ 0 0 0 Q5VYK3 Q5VYK3 Q5VYK3 ECM29 Proteasome-associated protein ECM29 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 697.683776855469 3 697.349573 2089.02689 1.5016 0.0010471 0.0659 4.5955E-05 1.5675 0.0010931 697.683769474331 79.278 0.79591 79.278 78.916 79.712 0 40 15 3 0 0 0 7.4354E-06 1 90696 63.337 59.676 1 16249000 1404 2385 1289 1308 1645 1645 AIQTVSCLLQGPCDAGNR 18 Unmodified _AIQTVSCLLQGPCDAGNR_ 0 0 0 Q9H3U1 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A MULTI-MSMS 210214_Eclipse_Hela_QC 980.974060058594 2 980.472391 1958.93023 0.98284 0.00096364 0.50887 0.00049893 1.4917 0.0014626 980.473343212143 71.393 0.69803 71.393 70.969 71.667 0 34 13 4 0 0 0 2.4072E-05 1 79824 109.84 102.87 1 7437600 1405 3461 1290 1309 1646 1646 AIRPQIDLK 9 Unmodified _AIRPQIDLK_ 0 0 1 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 210214_Eclipse_Hela_QC 527.324829101562 2 527.324391 1052.63423 0.42609 0.00022469 0.36492 0.00019243 0.79101 0.00041712 527.324563114604 31.893 0.54227 31.893 31.619 32.162 0 31 10 4 0 0 0 0.010615 1 23989 94.114 53.846 1 24644000 1406 1752 1291 1310 1647 1647 AISAANLHLR 10 Unmodified _AISAANLHLR_ 0 0 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 210214_Eclipse_Hela_QC 533.312377929688 2 533.311815 1064.60908 0.5225 0.00027865 -0.55884 -0.00029804 -0.036346 -1.9384E-05 533.311581484604 34.232 0.34846 34.232 34.016 34.364 0 11 6 2 0 0 0 0.035813 1 27510 37.549 25.835 1 2996700 1407 2450 1292 1311 1648 1648 AISEAQESVTK 11 Unmodified _AISEAQESVTK_ 0 0 0 Q6PJT7 Q6PJT7 Q6PJT7 ZC3H14 Zinc finger CCCH domain-containing protein 14 MULTI-MSMS 210214_Eclipse_Hela_QC 582.302978515625 2 581.801143 1161.58773 0.38292 0.00022279 0.85892 0.00049972 1.2418 0.0007225 581.801560781057 21.812 0.34806 21.812 21.659 22.007 0 10 6 2 0 0 0 0.00044478 1 9705 81.95 63.965 1 6849600 1408 2465 1293 1312 1649 1649 AISEPNFSVAYANMCR 16 Unmodified _AISEPNFSVAYANMCR_ 0 0 0 Q04637 Q04637 Q04637 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 MULTI-MSMS 210214_Eclipse_Hela_QC 915.921752929688 2 915.419096 1828.82364 1.2392 0.0011344 -0.21363 -0.00019556 1.0256 0.00093886 915.419312460565 76.375 0.79653 76.375 75.88 76.676 0 46 15 4 0 0 0 0.0055223 1 86617 43.604 37.762 1 14018000 1409 1847 1294 1313 1650 1650 AISGLEQDQPAR 12 Unmodified _AISGLEQDQPAR_ 0 0 0 O75312 O75312 O75312 ZPR1 Zinc finger protein ZPR1 MSMS 210214_Eclipse_Hela_QC 642.831298828125 2 642.830766 1283.64698 NaN NaN NaN NaN NaN NaN NaN 30.038 1 30.038 29.538 30.538 0 0 0 0 0.0011558 1 21470 86.624 49.149 1 1410 436 1295 1314 1651 1651 AISGVHTVR 9 Unmodified _AISGVHTVR_ 0 0 0 P41091;Q2VIR3 P41091 P41091 EIF2S3;EIF2S3L Eukaryotic translation initiation factor 2 subunit 3;Putative eukaryotic translation initiation factor 2 subunit 3-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 470.774078369141 2 470.272158 938.529764 0.51063 0.00024014 0.47943 0.00022546 0.99007 0.0004656 470.272381052849 18.194 0.49647 18.194 17.924 18.42 0 62 19 4 0 0 0 0.032197 1 4302 43.218 21.516 1 25371000 1411 1252 1296 1315 1652 1652 AISHEHSPSDLEAHFVPLVK 20 Unmodified _AISHEHSPSDLEAHFVPLVK_ 0 0 0 P30153 P30153 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform MULTI-MSMS 210214_Eclipse_Hela_QC 554.290649414062 4 554.039193 2212.12767 0.77351 0.00042856 0.052707 2.9202E-05 0.82622 0.00045776 554.289991677408 55.295 1.8914 55.295 54.426 56.318 0 128 37 6 0 0 0 1.4651E-05 1 56971 73.918 59.663 1 64083000 1412 1121 1297 1316 1653 1653 AISNNEADAVTLDGGLVYEAGLKPNNLK 28 Unmodified _AISNNEADAVTLDGGLVYEAGLKPNNLK_ 0 0 1 CON__Q0IIK2;CON__Q29443 CON__Q0IIK2 CON__Q0IIK2 MULTI-MSMS 210214_Eclipse_Hela_QC 963.168823242188 3 962.832965 2885.47707 1.2269 0.0011813 0.31084 0.00029928 1.5377 0.0014805 963.167336285464 85.122 0.54724 85.122 84.798 85.346 0 42 10 5 0 0 0 0.0010218 1 98861 38.146 34.932 1 11499000 + 1413 77 1298 1317 1654 1654 AISSASSPQSPGDALR 16 Unmodified _AISSASSPQSPGDALR_ 0 0 0 Q96KR1 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein MULTI-MSMS 210214_Eclipse_Hela_QC 772.389343261719 2 772.389176 1542.7638 0.3347 0.00025852 -0.10074 -7.781E-05 0.23396 0.00018071 772.389131342953 35.851 0.7821 35.851 35.54 36.322 0 32 15 3 0 0 0 2.3594E-05 1 29656 95.018 84.787 1 15735000 1414 3091 1299 1318 1655 1655 AISSDMFFGR 10 Unmodified _AISSDMFFGR_ 0 0 0 Q8N6H7 Q8N6H7 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 565.770324707031 2 565.768591 1129.52263 1.2387 0.00070084 -0.28866 -0.00016331 0.95007 0.00053752 565.768245318195 70.217 0.8456 70.217 69.875 70.72 0 30 16 3 0 0 0 0.0083649 1 78181 52.482 38.325 1 6583800 1415 2698 1300 1319 1656 1656 AISSSAISK 9 Unmodified _AISSSAISK_ 0 0 0 Q8N684 Q8N684 Q8N684 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 MULTI-MSMS 210214_Eclipse_Hela_QC 432.245025634766 2 432.245275 862.475997 0.037682 1.6288E-05 -0.00053998 -2.3341E-07 0.037142 1.6054E-05 432.245214979326 20.489 0.29869 20.489 20.364 20.663 0 10 5 3 0 0 0 0.0006804 1 7791 93.162 63.824 1 10345000 1416 2697 1301 1320 1657 1657 AISSTEAVLNNR 12 Unmodified _AISSTEAVLNNR_ 0 0 0 Q5T8P6;Q9P2N5 Q5T8P6;Q9P2N5 Q5T8P6 RBM26;RBM27 RNA-binding protein 26;RNA-binding protein 27 MULTI-MSMS 210214_Eclipse_Hela_QC 638.340393066406 2 637.838591 1273.66263 0.030647 1.9548E-05 -0.089519 -5.7099E-05 -0.058872 -3.7551E-05 637.838436760302 36.099 0.58607 36.099 35.786 36.372 0 27 11 3 0 0 0 1.3124E-08 1 29965 131.44 103.04 1 22666000 1417 2363;3805 1302 1321 1658 1658 AISSYFVSTMSSSIK 15 Unmodified _AISSYFVSTMSSSIK_ 0 0 0 O75367 O75367 O75367 H2AFY Core histone macro-H2A.1 MULTI-MSMS 210214_Eclipse_Hela_QC 804.907470703125 2 804.402906 1606.79126 1.5777 0.0012691 0.30477 0.00024516 1.8825 0.0015143 804.904929730079 81.444 1.1427 81.444 81.004 82.147 0 67 22 6 0 0 0 5.3331E-05 2 93727 106.01 88.143 1 36260000 1418 443 1303 1322 1659;1660 1660 AISTPETPLTK 11 Unmodified _AISTPETPLTK_ 0 0 0 Q14181 Q14181 Q14181 POLA2 DNA polymerase alpha subunit B MULTI-MSMS 210214_Eclipse_Hela_QC 579.32470703125 2 579.324254 1156.63395 0.65489 0.00037939 0.44935 0.00026032 1.1042 0.00063971 579.324541096731 42.104 0.6927 42.104 41.655 42.348 0 27 13 3 0 0 0 0.022308 1 38503 41.664 24.424 1 9162000 1419 2065 1304 1323 1661 1661 AISYHLVQK 9 Unmodified _AISYHLVQK_ 0 0 0 Q969Z0 Q969Z0 Q969Z0 TBRG4 Protein TBRG4 MSMS 210214_Eclipse_Hela_QC 529.802856445312 2 529.803291 1057.59203 NaN NaN NaN NaN NaN NaN NaN 26.728 1 26.728 26.228 27.228 0 0 0 0 0.012177 1 16742 74.184 46.302 1 1420 2953 1305 1324 1662 1662 AITDGQAGFGNDTLSK 16 Unmodified _AITDGQAGFGNDTLSK_ 0 0 0 Q7Z739 Q7Z739 Q7Z739 YTHDF3 YTH domain-containing family protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 797.890502929688 2 797.889009 1593.76346 1.7464 0.0013934 -1.1764 -0.00093865 0.56994 0.00045475 797.890448913222 50.424 0.9452 50.424 49.981 50.926 0 36 18 3 0 0 0 3.0631E-05 2 50438 92.925 75.061 1 7817100 1421 2558 1306 1325 1663;1664 1663 AITFFTEDDKPLLR 14 Unmodified _AITFFTEDDKPLLR_ 0 0 1 Q9Y2R4 Q9Y2R4 Q9Y2R4 DDX52 Probable ATP-dependent RNA helicase DDX52 MULTI-MSMS 210214_Eclipse_Hela_QC 556.301391601562 3 555.966401 1664.87737 0.76576 0.00042574 0.058421 3.248E-05 0.82418 0.00045822 556.300867460091 77.171 0.64648 77.171 76.975 77.622 0 27 12 3 0 0 0 0.015093 1 88007 40.552 36.004 1 1922000 1422 4012 1307 1326 1665 1665 AITGASLADIMAK 13 Oxidation (M) _AITGASLADIM(Oxidation (M))AK_ AITGASLADIM(1)AK AITGASLADIM(78)AK 0 1 0 P83731 P83731 P83731 RPL24 60S ribosomal protein L24 MULTI-MSMS 210214_Eclipse_Hela_QC 639.342590332031 2 639.34212 1276.66969 0.78668 0.00050296 0.12561 8.0306E-05 0.91229 0.00058327 639.342143998673 56.491 0.79581 56.491 56.168 56.964 0 41 15 3 0 0 0 0.0005417 1 58933 78.136 59.763 1 12903000 1423 1775 1308 1327 1666 1666 466 AITGASLADIMAK 13 Oxidation (M) _AITGASLADIM(Oxidation (M))AK_ AITGASLADIM(1)AK AITGASLADIM(63)AK 0 1 0 P83731 P83731 P83731 RPL24 60S ribosomal protein L24 MULTI-MSMS 210214_Eclipse_Hela_QC 639.843566894531 2 639.34212 1276.66969 0.81429 0.00052061 -1.876 -0.0011994 -1.0617 -0.00067879 639.342067465861 76.346 0.59717 76.346 76.029 76.627 0 38 11 4 0 0 0 0.0022446 1 86604 63.408 45.544 1 13051000 1424 1775 1308 1327 1667 1667 466 AITGASLADIMAK 13 Unmodified _AITGASLADIMAK_ 0 0 0 P83731 P83731 P83731 RPL24 60S ribosomal protein L24 MULTI-MSMS 210214_Eclipse_Hela_QC 631.345153808594 2 631.344663 1260.67477 0.79161 0.00049978 -0.72923 -0.00046039 0.062379 3.9383E-05 631.34446267965 76.353 1.4437 76.353 75.93 77.373 0 98 28 5 0 0 0 0.00075072 2 87293 64.73 44.163 1 278600000 1425 1775 1308 1328 1668;1669 1669 AITHLNNNFMFGQK 14 Unmodified _AITHLNNNFMFGQK_ 0 0 0 P14866 P14866 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L MULTI-MSMS 210214_Eclipse_Hela_QC 545.942993164062 3 545.608442 1633.8035 0.95843 0.00052293 -0.44479 -0.00024268 0.51364 0.00028025 545.608334595302 53.723 1.3337 53.723 53.291 54.625 0 86 26 5 0 0 0 1.745E-30 2 54873 155.86 147.68 1 83072000 1426 890 1309 1329 1670;1671 1670 AITIAGIPQSIIECVK 16 Unmodified _AITIAGIPQSIIECVK_ 0 0 0 Q15366 Q15366 Q15366 PCBP2 Poly(rC)-binding protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 857.489685058594 2 856.984398 1711.95424 1.4844 0.0012721 -0.059684 -5.1148E-05 1.4247 0.001221 856.98465852467 103.56 1.1938 103.56 103.09 104.28 0 73 23 5 0 0 0 0.00027513 2 124158 67.385 57.155 1 63669000 1427 2175 1310 1330 1672;1673 1672 AITIAGVPQSVTECVK 16 Unmodified _AITIAGVPQSVTECVK_ 0 0 0 Q15365 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 836.952819824219 2 836.950555 1671.88656 1.6839 0.0014094 -0.10907 -9.1285E-05 1.5749 0.0013181 836.950597235258 72.984 0.89713 72.984 72.612 73.509 0 66 17 6 0 0 0 2.7458E-07 3 81859 131.17 125.57 1 95506000 1428 2174 1311 1331 1674;1675;1676 1675 AITIANQTNCPLYITK 16 Unmodified _AITIANQTNCPLYITK_ 0 0 0 Q16555 Q16555 Q16555 DPYSL2 Dihydropyrimidinase-related protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 910.982421875 2 910.982386 1819.95022 1.2934 0.0011783 1.1807 0.0010756 2.4741 0.0022539 911.485580508641 68.48 0.92139 68.48 68.207 69.128 0 58 18 5 0 0 0 2.5206E-11 1 75701 128.28 118.6 1 45720000 1429 2234 1312 1332 1677 1677 AITPAYPANHADIIFDITDGNLR 23 Unmodified _AITPAYPANHADIIFDITDGNLR_ 0 0 0 CON__ENSEMBL:ENSBTAP00000016046 CON__ENSEMBL:ENSBTAP00000016046 CON__ENSEMBL:ENSBTAP00000016046 MULTI-MSMS 210214_Eclipse_Hela_QC 833.763549804688 3 833.427322 2497.26014 0.95647 0.00079715 0.46146 0.00038459 1.4179 0.0011817 833.427751264241 99.214 0.69611 99.214 98.859 99.555 0 57 13 5 0 0 0 1.3021E-09 1 118321 85.945 81.783 1 18004000 + 1430 35 1313 1333 1678 1678 AITSGGITYQDQPWHADCFVCVTCSK 26 Unmodified _AITSGGITYQDQPWHADCFVCVTCSK_ 0 0 0 Q13642 Q13642 Q13642 FHL1 Four and a half LIM domains protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1001.44793701172 3 1001.11409 3000.32045 1.3561 0.0013576 -0.41619 -0.00041665 0.93987 0.00094092 1001.44845190441 80.776 0.69544 80.776 80.458 81.153 0 48 13 6 0 0 0 4.7636E-05 2 92836 57.61 55.579 1 12910000 1431 2028 1314 1334 1679;1680 1680 AITVFSPDGHLFQVEYAQEAVK 22 Unmodified _AITVFSPDGHLFQVEYAQEAVK_ 0 0 0 O14818;Q8TAA3 O14818 O14818 PSMA7;PSMA8 Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like MULTI-MSMS 210214_Eclipse_Hela_QC 817.737487792969 3 817.084785 2448.23253 1.9601 0.0016015 0.085227 6.9637E-05 2.0453 0.0016712 817.41903601168 93.414 1.3917 93.414 93.041 94.433 0 106 27 7 0 0 0 3.5423E-29 2 110567 153.82 138.58 1 93812000 1432 211 1315 1335 1681;1682 1682 AITVQEIAVLK 11 Unmodified _AITVQEIAVLK_ 0 0 0 Q96PZ0 Q96PZ0 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 592.866027832031 2 592.866089 1183.71762 0.96658 0.00057306 -0.28155 -0.00016692 0.68503 0.00040613 592.865946043228 74.099 0.44833 74.099 73.857 74.306 0 14 8 2 0 0 0 0.0022225 2 83672 63.184 41.909 1 2151700 1433 3114 1316 1336 1683;1684 1683 AITYNAMLAETSTVFHQNDVK 21 Unmodified _AITYNAMLAETSTVFHQNDVK_ 0 0 0 Q9BUB7 Q9BUB7 Q9BUB7 TMEM70 Transmembrane protein 70, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 785.055053710938 3 785.054609 2352.142 1.1304 0.00088745 -0.66324 -0.00052068 0.46718 0.00036677 785.388014271442 85.37 0.74507 85.37 85.047 85.792 0 44 14 4 0 0 0 0.00010957 1 99338 54.225 49.872 1 14624000 1434 3285 1317 1337 1685 1685 AITYQIAK 8 Unmodified _AITYQIAK_ 0 0 0 Q9NQZ2 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 MULTI-MSMS 210214_Eclipse_Hela_QC 454.265930175781 2 454.26601 906.517468 0.0065694 2.9842E-06 0.62103 0.00028211 0.6276 0.0002851 454.266021121589 32.844 0.52069 32.844 32.561 33.081 0 23 10 3 0 0 0 0.01558 1 25474 58.687 40.362 1 4248200 1435 3607 1318 1338 1686 1686 AIVAESLNNTSIK 13 Unmodified _AIVAESLNNTSIK_ 0 0 0 P35251 P35251 P35251 RFC1 Replication factor C subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 680.377807617188 2 680.377549 1358.74054 0.93605 0.00063687 -0.40073 -0.00027265 0.53532 0.00036422 680.377130647234 48.271 0.53088 48.271 48.02 48.551 0 21 10 3 0 0 0 0.00097488 1 47414 62.303 50.096 1 7348700 1436 1184 1319 1339 1687 1687 AIVAGDQNVEYK 12 Unmodified _AIVAGDQNVEYK_ 0 0 0 Q13642 Q13642 Q13642 FHL1 Four and a half LIM domains protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 653.836547851562 2 653.835517 1305.65648 0.58834 0.00038468 0.58417 0.00038195 1.1725 0.00076663 653.8357962393 34.811 0.64115 34.811 34.502 35.144 0 34 13 4 0 0 0 6.7092E-06 1 28118 112.75 99.937 1 18627000 1437 2028 1320 1340 1688 1688 AIVAIENPADVSVISSR 17 Unmodified _AIVAIENPADVSVISSR_ 0 0 0 P08865 P08865 P08865 RPSA 40S ribosomal protein SA MULTI-MSMS 210214_Eclipse_Hela_QC 870.979187011719 2 870.978158 1739.94176 1.2072 0.0010515 0.025444 2.2161E-05 1.2327 0.0010736 870.978135546751 82.83 1.309 82.83 82.444 83.753 0 113 27 6 0 0 0 1.9464E-46 3 95503 196.38 187.06 1 281690000 1438 762 1321 1341 1689;1690;1691 1689 AIVDALPPPCESACTVPTDVDK 22 Unmodified _AIVDALPPPCESACTVPTDVDK_ 0 0 0 Q15181 Q15181 Q15181 PPA1 Inorganic pyrophosphatase MULTI-MSMS 210214_Eclipse_Hela_QC 1178.56506347656 2 1178.06398 2354.1134 1.4334 0.0016886 -0.51401 -0.00060554 0.91936 0.0010831 1178.56509544391 77.647 1.1444 77.647 77.175 78.319 0 125 22 8 0 0 0 1.1922E-06 2 89014 83.54 76.959 1 92120000 1439 2162 1322 1342 1692;1693 1693 AIVDCGFEHPSEVQHECIPQAILGMDVLCQAK 32 Unmodified _AIVDCGFEHPSEVQHECIPQAILGMDVLCQAK_ 0 0 0 O00148;Q13838 O00148;Q13838 O00148 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B MULTI-MSMS 210214_Eclipse_Hela_QC 914.18408203125 4 913.682021 3650.69898 1.728 0.0015788 -0.78042 -0.00071306 0.94757 0.00086578 914.182732107942 97.293 1.5909 97.293 96.621 98.212 0 180 31 10 0 0 0 1.4783E-09 2 115575 77.276 75.572 1 228700000 1440 127;2036 1323 1343 1694;1695 1694 AIVDCGFEHPSEVQHECIPQAILGMDVLCQAK 32 Unmodified _AIVDCGFEHPSEVQHECIPQAILGMDVLCQAK_ 0 0 0 O00148;Q13838 O00148;Q13838 O00148 DDX39A;DDX39B ATP-dependent RNA helicase DDX39A;Spliceosome RNA helicase DDX39B MULTI-MSMS 210214_Eclipse_Hela_QC 1218.57873535156 3 1217.90694 3650.69898 1.5856 0.0019311 0.57734 0.00070314 2.1629 0.0026342 1218.91015597428 97.307 0.84552 97.307 96.969 97.815 0 46 16 5 0 0 0 2.2224E-05 1 115790 49.486 47.221 1 5500600 1441 127;2036 1323 1343 1696 1696 AIVDGNLK 8 Unmodified _AIVDGNLK_ 0 0 0 O75369;P21333 O75369;P21333 O75369 FLNB;FLNA Filamin-B;Filamin-A MULTI-MSMS 210214_Eclipse_Hela_QC 415.242340087891 2 415.242535 828.470518 0.036308 1.5077E-05 -1.5718 -0.00065269 -1.5355 -0.00063761 415.242411853506 27.965 0.83587 27.965 27.601 28.437 0 39 16 3 0 0 0 0.028008 1 18392 50.127 6.665 1 59507000 1442 445;995 1324 1344 1697 1697 AIVEFLSNLAR 11 Unmodified _AIVEFLSNLAR_ 0 0 0 Q13112 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B MULTI-MSMS 210214_Eclipse_Hela_QC 616.855285644531 2 616.853512 1231.69247 0.28139 0.00017357 0.50288 0.0003102 0.78427 0.00048378 617.355579445525 95.913 0.45412 95.913 95.72 96.174 0 21 9 3 0 0 0 0.0037762 1 113883 55.567 27.168 1 3127900 1443 1944 1325 1345 1698 1698 AIVFSGCGR 9 Unmodified _AIVFSGCGR_ 0 0 0 Q9BUL9 Q9BUL9 Q9BUL9 RPP25 Ribonuclease P protein subunit p25 MULTI-MSMS 210214_Eclipse_Hela_QC 483.744964599609 2 483.744919 965.475285 0.25437 0.00012305 0.35601 0.00017222 0.61038 0.00029527 483.74479364544 32.994 0.68673 32.994 32.79 33.477 0 22 13 2 0 0 0 0.023717 2 25595 47.082 18.659 1 5897600 1444 3292 1326 1346 1699;1700 1699 AIVFVVDSAAFQR 13 Unmodified _AIVFVVDSAAFQR_ 0 0 0 Q9Y5M8 Q9Y5M8 Q9Y5M8 SRPRB Signal recognition particle receptor subunit beta MULTI-MSMS 210214_Eclipse_Hela_QC 711.889343261719 2 711.890626 1421.7667 1.1148 0.00079363 -1.8948 -0.0013489 -0.77999 -0.00055527 711.888722704743 87.491 0.44737 87.491 87.234 87.681 0 21 8 3 0 0 0 0.015282 1 102266 52.49 29.418 1 2333600 1445 4119 1327 1347 1701 1701 AIVICPTDEDLK 12 Unmodified _AIVICPTDEDLK_ 0 0 0 Q9BUJ2 Q9BUJ2 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 687.351440429688 2 687.352685 1372.69082 1.0849 0.00074569 -0.56512 -0.00038844 0.51976 0.00035726 687.352010695679 59.675 0.74586 59.675 59.353 60.099 0 44 14 4 0 0 0 0.019618 1 63335 52.725 43.02 1 24128000 1446 3289 1328 1348 1702 1702 AIVNVIGMHK 10 Unmodified _AIVNVIGMHK_ 0 0 0 O75533 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 541.313415527344 2 541.312969 1080.61138 0.3655 0.00019785 0.34695 0.00018781 0.71244 0.00038565 541.312971382523 40.467 0.59699 40.467 40.164 40.76 0 24 11 3 0 0 0 0.00042228 1 36250 89.296 80.966 1 7989100 1447 466 1329 1349 1703 1703 AIVPLEAR 8 Unmodified _AIVPLEAR_ 0 0 0 O14776 O14776 O14776 TCERG1 Transcription elongation regulator 1 MULTI-MSMS 210214_Eclipse_Hela_QC 434.766479492188 2 434.766178 867.517802 0.16125 7.0107E-05 0.9701 0.00042177 1.1314 0.00049187 434.766271083175 42.699 0.84592 42.699 42.149 42.995 0 37 16 3 0 0 0 0.0099908 1 39301 67.032 35.743 1 10616000 1448 208 1330 1350 1704 1704 AIVQLVNER 9 Unmodified _AIVQLVNER_ 0 0 0 Q15102 Q15102 Q15102 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma MULTI-MSMS 210214_Eclipse_Hela_QC 521.306091308594 2 521.306198 1040.59784 0.32642 0.00017016 0.46564 0.00024274 0.79206 0.0004129 521.306650340582 45.485 1.1944 45.485 44.986 46.18 0 38 23 3 0 0 0 0.00069736 1 43429 92.47 33.866 1 6714300 1449 2154 1331 1351 1705 1705 AIVQQWLEYR 10 Unmodified _AIVQQWLEYR_ 0 0 0 O43324 O43324 O43324 EEF1E1 Eukaryotic translation elongation factor 1 epsilon-1 MULTI-MSMS 210214_Eclipse_Hela_QC 653.352783203125 2 653.351137 1304.68772 0.86432 0.0005647 0.17462 0.00011409 1.0389 0.00067879 653.351200286227 76.121 0.69675 76.121 75.83 76.527 0 29 13 3 0 0 0 0.00020724 3 86278 100.02 61.241 1 16282000 1450 299 1332 1352 1706;1707;1708 1707 AIVSSGTLGDR 11 Unmodified _AIVSSGTLGDR_ 0 0 0 Q03701 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 210214_Eclipse_Hela_QC 538.290588378906 2 538.290745 1074.56694 0.46133 0.00024833 0.19277 0.00010377 0.65411 0.0003521 538.29081820406 31.644 0.54684 31.644 31.321 31.868 0 22 10 3 0 0 0 0.00043236 1 23691 82.287 55.033 1 9287900 1451 1843 1333 1353 1709 1709 AIVWGMQTR 9 Unmodified _AIVWGMQTR_ 0 0 0 P53396 P53396 P53396 ACLY ATP-citrate synthase MULTI-MSMS 210214_Eclipse_Hela_QC 531.2822265625 2 531.281669 1060.54878 1.0344 0.00054954 0.31659 0.0001682 1.351 0.00071774 531.28183757764 54.06 0.8855 54.06 53.59 54.476 0 36 17 3 0 0 0 0.0015069 1 55434 81.548 62.817 1 12916000 1452 1495 1334 1354 1710 1710 AIWNVINWENVTER 14 Unmodified _AIWNVINWENVTER_ 0 0 0 P04179 P04179 P04179 SOD2 Superoxide dismutase [Mn], mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 872.94580078125 2 872.444286 1742.87402 1.3671 0.0011927 0.90841 0.00079254 2.2755 0.0019853 872.444309883483 104.08 1.4423 104.08 103.28 104.73 0 84 28 4 0 0 0 1.1145E-06 1 124876 110.66 87.744 1 31241000 1453 661 1335 1355 1711 1711 AIYAALSGNLK 11 Unmodified _AIYAALSGNLK_ 0 0 0 P57740 P57740 P57740 NUP107 Nuclear pore complex protein Nup107 MULTI-MSMS 210214_Eclipse_Hela_QC 560.822021484375 2 560.821681 1119.62881 0.37957 0.00021287 0.7709 0.00043234 1.1505 0.00064521 560.822024778207 56.442 0.34873 56.442 56.268 56.617 0 10 6 2 0 0 0 0.0041456 1 58962 53.756 26.502 1 4777200 1454 1566 1336 1356 1712 1712 AIYAYALQVFPSK 13 Unmodified _AIYAYALQVFPSK_ 0 0 0 O94906 O94906 O94906 PRPF6 Pre-mRNA-processing factor 6 MULTI-MSMS 210214_Eclipse_Hela_QC 735.904357910156 2 735.903202 1469.79185 1.2451 0.00091626 0.045033 3.314E-05 1.2901 0.0009494 735.903239683475 90.428 0.44746 90.428 90.157 90.604 0 16 8 2 0 0 0 0.00023022 1 106192 76.143 68.864 1 3194700 1455 525 1337 1357 1713 1713 AIYDFEAAEDNELTFK 16 Unmodified _AIYDFEAAEDNELTFK_ 0 0 0 Q92783 Q92783 Q92783 STAM Signal transducing adapter molecule 1 MULTI-MSMS 210214_Eclipse_Hela_QC 938.43798828125 2 938.435989 1874.85742 1.6704 0.0015675 0.21497 0.00020173 1.8853 0.0017693 938.436331740949 91.425 0.59606 91.425 91.151 91.748 0 33 11 4 0 0 0 0.003715 1 107745 47.288 39.721 1 4067200 1456 2906 1338 1358 1714 1714 AIYDIERPDLITYEPFYTSGYDDK 24 Unmodified _AIYDIERPDLITYEPFYTSGYDDK_ 0 0 1 O14639 O14639 O14639 ABLIM1 Actin-binding LIM protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 962.460205078125 3 962.123634 2883.34907 1.7332 0.0016676 0.30317 0.00029169 2.0364 0.0019592 962.792321127851 102.75 0.69538 102.75 102.44 103.14 0 51 13 6 0 0 0 0.00021022 1 123290 37.896 35.389 1 5197600 1457 193 1339 1359 1715 1715 AIYDTPCIQAESEK 14 Unmodified _AIYDTPCIQAESEK_ 0 0 0 O00232 O00232 O00232 PSMD12 26S proteasome non-ATPase regulatory subunit 12 MULTI-MSMS 210214_Eclipse_Hela_QC 812.881103515625 2 812.879795 1623.74504 0.81521 0.00066267 0.084915 6.9026E-05 0.90013 0.0007317 812.879946916435 52.25 0.64697 52.25 51.946 52.593 0 43 12 5 0 0 0 2.1869E-14 1 53121 147.91 139.6 1 27947000 1458 140 1340 1360 1716 1716 AIYELAISQPR 11 Unmodified _AIYELAISQPR_ 0 0 0 Q9BZJ0 Q9BZJ0 Q9BZJ0 CRNKL1 Crooked neck-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 630.852416992188 2 630.85097 1259.68739 1.1289 0.00071217 0.72027 0.00045438 1.8492 0.0011666 630.851482955625 65.356 0.59778 65.356 65.154 65.751 0 27 11 3 0 0 0 0.00083626 1 71430 71.349 59.986 1 2970100 1459 3372 1341 1361 1717 1717 AIYEVLFR 8 Unmodified _AIYEVLFR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 506.288848876953 2 505.78711 1009.55967 0.13362 6.7581E-05 -0.42252 -0.00021371 -0.2889 -0.00014612 505.786752443278 80.005 0.59752 80.005 79.612 80.21 0 23 11 3 0 0 0 0.010017 1 91713 66.993 50.839 1 3153000 1460 2158 1342 1362 1718 1718 AIYFDGDFGQIVR 13 Unmodified _AIYFDGDFGQIVR_ 0 0 0 Q96RP9 Q96RP9 Q96RP9 GFM1 Elongation factor G, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 750.880065917969 2 750.877716 1499.74088 1.5595 0.001171 -3.6743 -0.0027589 -2.1147 -0.0015879 750.874302274177 91.609 0.84508 91.609 91.052 91.897 0 48 16 4 0 0 0 9.0095E-05 1 108012 91.584 75.381 1 7313900 1461 3124 1343 1363 1719 1719 AIYHDLEQSIR 11 Unmodified _AIYHDLEQSIR_ 0 0 0 Q9UNF0 Q9UNF0 Q9UNF0 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 448.902191162109 3 448.901731 1343.68336 0.44916 0.00020163 0.68418 0.00030713 1.1333 0.00050876 448.902102082789 44.534 0.49688 44.534 44.339 44.836 0 26 9 4 0 0 0 0.011758 2 42003 39.58 30.125 1 13005000 1462 3953 1344 1364 1720;1721 1720 AIYNNMK 7 Unmodified _AIYNNMK_ 0 0 0 P16615;O14983 P16615 P16615 ATP2A2;ATP2A1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 427.188873291016 2 427.215463 852.416374 0.089408 3.8197E-05 0.38884 0.00016612 0.47825 0.00020432 427.215647995669 22.977 0.54807 22.977 22.703 23.251 0 18 10 2 0 0 0 0.0079925 2 11341 84.025 51.096 1 17341000 1463 922 1345 1365 1722;1723 1722 AIYQATYR 8 Unmodified _AIYQATYR_ 0 0 0 P28074 P28074 P28074 PSMB5 Proteasome subunit beta type-5 MULTI-MSMS 210214_Eclipse_Hela_QC 493.259155273438 2 493.258717 984.50288 -0.51384 -0.00025346 0.62131 0.00030646 0.10747 5.301E-05 493.258971086489 28.528 0.65538 28.528 28.239 28.894 0 27 13 3 0 0 0 0.00045785 1 19184 125.25 98.29 1 46646000 1464 1085 1346 1366 1724 1724 AIYQVYNALQEK 12 Unmodified _AIYQVYNALQEK_ 0 0 0 Q15018 Q15018 Q15018 FAM175B BRISC complex subunit Abro1 MULTI-MSMS 210214_Eclipse_Hela_QC 720.381286621094 2 720.380091 1438.74563 0.50105 0.00036095 0.38701 0.00027879 0.88806 0.00063974 720.380354645458 64.139 0.48772 64.139 63.871 64.359 0 20 9 3 0 0 0 0.00026874 1 69711 94.297 76.432 1 4205400 1465 2131 1347 1367 1725 1725 AKPAMPQDSVPSPR 14 Unmodified _AKPAMPQDSVPSPR_ 0 0 1 P53396 P53396 P53396 ACLY ATP-citrate synthase MULTI-MSMS 210214_Eclipse_Hela_QC 494.591735839844 3 494.257409 1479.7504 0.24493 0.00012106 0.86281 0.00042645 1.1077 0.00054751 494.591478896599 27.846 0.88564 27.846 27.303 28.189 0 45 17 4 0 0 0 0.003904 1 18472 33.724 22.778 1 6346300 1466 1495 1348 1368 1726 1726 AKPPPGGGEQEPPPPPAPQDVEMK 24 Unmodified _AKPPPGGGEQEPPPPPAPQDVEMK_ 0 0 1 O43242 O43242 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 MULTI-MSMS 210214_Eclipse_Hela_QC 818.074829101562 3 817.40553 2449.19476 1.0269 0.00083943 -0.06713 -5.4873E-05 0.95981 0.00078456 817.73994791565 43.023 1.2448 43.023 42.448 43.692 0 96 24 5 0 0 0 0.0014126 3 39563 43.888 40.923 1 41473000 1467 291 1349 1369 1727;1728;1729 1728 AKPSPAPPSTTTAPDASGPQK 21 Unmodified _AKPSPAPPSTTTAPDASGPQK_ 0 0 1 P40855 P40855 P40855 PEX19 Peroxisomal biogenesis factor 19 MULTI-MSMS 210214_Eclipse_Hela_QC 669.678588867188 3 669.344488 2005.01163 0.61425 0.00041115 -0.19251 -0.00012885 0.42174 0.00028229 669.678631816709 22.778 0.34869 22.778 22.603 22.952 0 18 6 4 0 0 0 0.0026326 1 11138 41.136 35.707 1 8457000 1468 1246 1350 1370 1730 1730 AKPVATAPIPGTPWCVVWTGDER 23 Unmodified _AKPVATAPIPGTPWCVVWTGDER_ 0 0 1 O14776 O14776 O14776 TCERG1 Transcription elongation regulator 1 MULTI-MSMS 210214_Eclipse_Hela_QC 837.09716796875 3 836.761648 2507.26311 1.3236 0.0011076 0.028984 2.4253E-05 1.3526 0.0011318 837.09609574927 90.431 0.99432 90.431 90.057 91.052 0 62 19 5 0 0 0 0.0057762 1 106152 36.736 28.932 1 12382000 1469 208 1351 1371 1731 1731 AKPVLEDLR 9 Unmodified _AKPVLEDLR_ 0 0 1 CON__P15497 CON__P15497 CON__P15497 MULTI-SECPEP 210214_Eclipse_Hela_QC 520.766418457031 2 520.808574 1039.60259 -0.54058 -0.00028154 0.75589 0.00039367 0.21531 0.00011214 520.80896844546 28.569 0.556 28.569 28.288 28.844 0 37 11 4 0 0 0 0.047776 1 19493 86.67 53.12 1 71647000 + 1470 64 1352 1372 1732 1732 AKPVNSKPDSAYR 13 Unmodified _AKPVNSKPDSAYR_ 0 0 2 O95573 O95573 O95573 ACSL3 Long-chain-fatty-acid--CoA ligase 3 MULTI-MSMS 210214_Eclipse_Hela_QC 478.256988525391 3 478.256285 1431.74703 0.039445 1.8865E-05 0.78542 0.00037563 0.82487 0.0003945 478.256631621289 16.166 0.15611 16.166 16.035 16.191 0 10 4 3 0 0 0 0.0020067 1 2558 71.558 55.802 1 10110000 1471 581 1353 1373 1733 1733 AKPYEGSILEADCDILIPAASEK 23 Unmodified _AKPYEGSILEADCDILIPAASEK_ 0 0 1 P00367 P00367 P00367 GLUD1 Glutamate dehydrogenase 1, mitochondrial MSMS 210214_Eclipse_Hela_QC 830.75341796875 3 830.752595 2489.23596 NaN NaN NaN NaN NaN NaN NaN 84.3 1 84.3 83.8 84.8 0 0 0 0 0.00078599 1 97841 51.301 44.426 1 1472 620 1354 1374 1734 1734 AKQEELEAALQR 12 Unmodified _AKQEELEAALQR_ 0 0 1 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__P08729 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 210214_Eclipse_Hela_QC 693.372314453125 2 693.372798 1384.73104 0.67401 0.00046734 -1.7011 -0.0011795 -1.0271 -0.00071217 693.372407329364 32.614 0.39057 32.614 32.361 32.752 0 18 7 3 0 0 0 0.0021852 1 25080 91.584 66.808 1 3923400 + 1473 60;93 1355 1375 1735 1735 AKVDEFPLCGHMVSDEYEQLSSEALEAAR 29 Unmodified _AKVDEFPLCGHMVSDEYEQLSSEALEAAR_ 0 0 1 P27635 P27635 P27635 RPL10 60S ribosomal protein L10 MULTI-MSMS 210214_Eclipse_Hela_QC 821.635559082031 4 821.132687 3280.50164 0.87467 0.00071822 -0.50269 -0.00041278 0.37198 0.00030544 821.633904782033 95.897 1.0002 95.897 95.372 96.372 0 85 20 7 0 0 0 1.5762E-07 1 113715 70.213 64.118 1 37463000 1474 1073 1356 1376 1736 1736 ALAAAGYDVEK 11 Unmodified _ALAAAGYDVEK_ 0 0 0 P16403;P10412;P16402;P22492;Q02539 P16403 P16403 HIST1H1C;HIST1H1E;HIST1H1D;HIST1H1T;HIST1H1A Histone H1.2;Histone H1.4;Histone H1.3;Histone H1t;Histone H1.1 MULTI-MSMS 210214_Eclipse_Hela_QC 554.789855957031 2 554.287671 1106.56079 0.23329 0.00012931 -0.79912 -0.00044294 -0.56584 -0.00031364 554.28762786535 35.465 2.5015 35.465 35.045 37.546 0 177 50 6 0 0 0 3.534E-05 3 28873 105.4 54.715 1 2662600000 1475 919 1357 1377 1737;1738;1739 1737 ALAAAGYDVEK 11 Unmodified _ALAAAGYDVEK_ 0 0 0 P16403;P10412;P16402;P22492;Q02539 P16403 P16403 HIST1H1C;HIST1H1E;HIST1H1D;HIST1H1T;HIST1H1A Histone H1.2;Histone H1.4;Histone H1.3;Histone H1t;Histone H1.1 MULTI-MSMS 210214_Eclipse_Hela_QC 554.66455078125 2 554.287671 1106.56079 0.16924 9.3805E-05 0.21403 0.00011863 0.38326 0.00021244 554.287757194197 38.065 0.94504 38.065 37.447 38.392 0 46 18 3 0 0 0 0.029307 2 32419 37.344 16.824 1 33481000 1476 919 1357 1377 1740;1741 1741 ALAAEMTDYFSR 12 Unmodified _ALAAEMTDYFSR_ 0 0 0 Q8N3C0 Q8N3C0 Q8N3C0 ASCC3 Activating signal cointegrator 1 complex subunit 3 MULTI-MSMS 210214_Eclipse_Hela_QC 687.821472167969 2 687.821552 1373.62855 0.66054 0.00045433 -1.1219 -0.00077167 -0.46137 -0.00031734 687.820884809244 75.349 0.44817 75.349 75.153 75.601 0 20 8 3 0 0 0 0.0015827 1 85610 61.161 35.602 1 2655700 1477 2678 1358 1378 1742 1742 ALAAGGVGSIVR 12 Unmodified _ALAAGGVGSIVR_ 0 0 0 O15511 O15511 O15511 ARPC5 Actin-related protein 2/3 complex subunit 5 MULTI-MSMS 210214_Eclipse_Hela_QC 535.819519042969 2 535.819473 1069.62439 1.0686 0.0005726 0.1669 8.9427E-05 1.2355 0.00066203 535.819519815631 47.299 0.74588 47.299 46.976 47.722 0 32 14 3 0 0 0 0.00040786 1 45915 72.643 26.925 1 16413000 1478 278 1359 1379 1743 1743 ALAAGGYDVEK 11 Unmodified _ALAAGGYDVEK_ 0 0 0 P16401 P16401 P16401 HIST1H1B Histone H1.5 MULTI-MSMS 210214_Eclipse_Hela_QC 547.280151367188 2 547.279846 1092.54514 0.27241 0.00014909 0.057324 3.1372E-05 0.32974 0.00018046 547.279881325372 32.777 1.3141 32.777 32.261 33.576 0 67 26 4 0 0 0 4.4579E-05 1 25188 102.06 84.676 1 179780000 1479 918 1360 1380 1744 1744 ALAAPAAEEK 10 Unmodified _ALAAPAAEEK_ 0 0 0 Q01650 Q01650 Q01650 SLC7A5 Large neutral amino acids transporter small subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 485.763916015625 2 485.763832 969.513111 0.22339 0.00010852 0.70223 0.00034112 0.92563 0.00044964 485.763825567188 22.05 0.64544 22.05 21.808 22.454 0 34 12 4 0 0 0 0.00014705 1 9958 104.2 92.838 1 45257000 1480 1818 1361 1381 1745 1745 ALAAQLPVLPR 11 Unmodified _ALAAQLPVLPR_ 0 0 0 Q96GK7 Q96GK7 Q96GK7 FAHD2A Fumarylacetoacetate hydrolase domain-containing protein 2A MULTI-MSMS 210214_Eclipse_Hela_QC 574.861877441406 2 574.861141 1147.70773 0.73286 0.00042129 -0.040889 -2.3505E-05 0.69197 0.00039778 574.861074853329 73.399 0.5979 73.399 73.06 73.658 0 28 11 3 0 0 0 0.009663 1 82518 49.96 34.298 1 5184800 1481 3045 1362 1382 1746 1746 ALAAVPSAGSVQR 13 Unmodified _ALAAVPSAGSVQR_ 0 0 0 Q14160 Q14160 Q14160 SCRIB Protein scribble homolog MULTI-MSMS 210214_Eclipse_Hela_QC 613.846374511719 2 613.846219 1225.67788 0.21669 0.00013301 -0.1174 -7.2068E-05 0.099286 6.0946E-05 613.846102685369 38.165 0.49754 38.165 37.894 38.392 0 21 9 3 0 0 0 0.010462 1 33216 44.882 22.169 1 4540500 1482 2062 1363 1383 1747 1747 ALADDDFLTVTGK 13 Unmodified _ALADDDFLTVTGK_ 0 0 0 P33991 P33991 P33991 MCM4 DNA replication licensing factor MCM4 MULTI-MSMS 210214_Eclipse_Hela_QC 683.348388671875 2 683.348457 1364.68236 0.32773 0.00022395 1.6703 0.0011414 1.998 0.0013653 683.349368833166 74.729 0.69856 74.729 74.554 75.253 0 36 13 4 0 0 0 0.00087211 1 84605 63.415 40.702 1 38998000 1483 1168 1364 1384 1748 1748 ALADHSMAQTPR 12 Unmodified _ALADHSMAQTPR_ 0 0 0 P08240 P08240 P08240 SRPR Signal recognition particle receptor subunit alpha MSMS 210214_Eclipse_Hela_QC 649.320861816406 2 649.319511 1296.62447 NaN NaN NaN NaN NaN NaN NaN 21.845 1 21.845 21.345 22.345 0 0 0 0 0.0019478 1 9734 78.655 49.182 1 1484 746 1365 1385 1749 1749 ALADIVIPQEYGITK 15 Unmodified _ALADIVIPQEYGITK_ 0 0 0 O43314 O43314 O43314 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 815.956420898438 2 815.956163 1629.89777 1.3613 0.0011107 -0.27379 -0.0002234 1.0875 0.00088732 815.955966287224 91.021 0.44754 91.021 90.803 91.251 0 19 8 3 0 0 0 0.0059939 1 107252 45.359 27.048 1 3740800 1485 298 1366 1386 1750 1750 ALADTENLR 9 Unmodified _ALADTENLR_ 0 0 0 Q9HAV7 Q9HAV7 Q9HAV7 GRPEL1 GrpE protein homolog 1, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 501.765075683594 2 501.764363 1001.51417 0.15554 7.8047E-05 0.66048 0.0003314 0.81602 0.00040945 501.764600565021 29.065 0.68474 29.065 28.645 29.33 0 34 13 3 0 0 0 0.0045594 1 19763 66.429 40.49 1 23988000 1486 3540 1367 1387 1751 1751 ALADVATVLGR 11 Unmodified _ALADVATVLGR_ 0 0 0 Q92542 Q92542 Q92542 NCSTN Nicastrin MULTI-MSMS 210214_Eclipse_Hela_QC 543.320617675781 2 543.319306 1084.62406 0.7928 0.00043074 -0.33107 -0.00017988 0.46173 0.00025087 543.319192427851 72.242 0.59695 72.242 71.916 72.513 0 33 11 4 0 0 0 0.00078981 1 80920 72.607 37.312 1 8583200 1487 2881 1368 1388 1752 1752 ALADVEVTYTVQR 13 Unmodified _ALADVEVTYTVQR_ 0 0 0 P52888 P52888 P52888 THOP1 Thimet oligopeptidase MULTI-MSMS 210214_Eclipse_Hela_QC 732.889099121094 2 732.888281 1463.76201 1.0378 0.0007606 0.015678 1.149E-05 1.0535 0.00077209 732.88821327745 62.709 0.69571 62.709 62.479 63.174 0 40 13 4 0 0 0 0.00022103 1 67669 90.685 71.905 1 10109000 1488 1485 1369 1389 1753 1753 ALADYIR 7 Unmodified _ALADYIR_ 0 0 0 Q9BS26 Q9BS26 Q9BS26 ERP44 Endoplasmic reticulum resident protein 44 MULTI-MSMS 210214_Eclipse_Hela_QC 411.229522705078 2 411.229428 820.444303 0.25848 0.0001063 0.4804 0.00019755 0.73888 0.00030385 411.229543988287 48.348 0.61943 48.348 48.07 48.689 0 28 12 3 0 0 0 0.029891 1 47439 55.441 0 1 9245200 1489 3251 1370 1390 1754 1754 ALADYIR 7 Unmodified _ALADYIR_ 0 0 0 Q9BS26 Q9BS26 Q9BS26 ERP44 Endoplasmic reticulum resident protein 44 MULTI-MSMS 210214_Eclipse_Hela_QC 411.229827880859 2 411.229428 820.444303 0.19391 7.9743E-05 0.013784 5.6685E-06 0.2077 8.5412E-05 411.229429761575 49.904 0.8932 49.904 49.436 50.329 0 37 17 3 0 0 0 0.012602 1 49660 74.517 0 1 7448600 1490 3251 1370 1390 1755 1755 ALAEGVLLR 9 Unmodified _ALAEGVLLR_ 0 0 0 P48637 P48637 P48637 GSS Glutathione synthetase MULTI-MSMS 210214_Eclipse_Hela_QC 471.292938232422 2 471.292559 940.570566 0.31238 0.00014722 0.40584 0.00019127 0.71822 0.00033849 471.292992607408 54.852 0.84594 54.852 54.426 55.272 0 42 16 4 0 0 0 0.0075411 1 56646 58.679 18.476 1 12273000 1491 1347 1371 1391 1756 1756 ALAELFGLLVK 11 Unmodified _ALAELFGLLVK_ 0 0 0 Q7Z6Z7 Q7Z6Z7 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 MULTI-MSMS 210214_Eclipse_Hela_QC 587.366088867188 2 587.365724 1172.7169 0.8154 0.00047894 -0.11779 -6.9185E-05 0.69761 0.00040975 587.365473338872 107.65 0.29842 107.65 107.46 107.76 0 10 5 3 0 0 0 0.024308 1 130227 40.352 36.513 1 5596600 1492 2557 1372 1392 1757 1757 ALAETGIAVPSYYNPAAVNPMK 22 Unmodified _ALAETGIAVPSYYNPAAVNPMK_ 0 0 0 Q7L4I2 Q7L4I2 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 1140.09045410156 2 1139.08283 2276.1511 1.3378 0.0015239 0.26814 0.00030544 1.606 0.0018293 1139.58449151847 91.686 0.59662 91.686 91.4 91.996 0 34 11 4 0 0 0 0.035677 2 108044 28.632 23.455 1 5479100 1493 2517 1373 1393 1758;1759 1759 ALAEVDVISLEQGK 14 Unmodified _ALAEVDVISLEQGK_ 0 0 0 O15213 O15213 O15213 WDR46 WD repeat-containing protein 46 MULTI-MSMS 210214_Eclipse_Hela_QC 736.405944824219 2 736.403763 1470.79297 1.1719 0.00086298 0.42962 0.00031637 1.6015 0.0011793 736.403939302989 77.895 0.59784 77.895 77.622 78.219 0 17 11 2 0 0 0 8.4591E-05 1 88801 85.813 70.241 1 9421800 1494 251 1374 1394 1760 1760 ALAEYVVQQEGAK 13 Unmodified _ALAEYVVQQEGAK_ 0 0 0 Q8WVX9 Q8WVX9 Q8WVX9 FAR1 Fatty acyl-CoA reductase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 703.369934082031 2 703.369724 1404.72489 0.84379 0.0005935 -0.54603 -0.00038406 0.29776 0.00020944 703.369293967063 48.591 0.43098 48.591 48.408 48.839 0 14 8 2 0 0 0 0.00020553 1 47908 78.655 62.993 1 3709500 1495 2843 1375 1395 1761 1761 ALAFHPVEPVLVTASEDHTLK 21 Unmodified _ALAFHPVEPVLVTASEDHTLK_ 0 0 0 Q13033 Q13033 Q13033 STRN3 Striatin-3 MULTI-MSMS 210214_Eclipse_Hela_QC 569.560119628906 4 569.308672 2273.20558 1.2158 0.00069217 -0.30895 -0.00017589 0.90687 0.00051629 569.559207391785 71.086 0.59801 71.086 70.82 71.418 0 29 11 4 0 0 0 0.045782 1 79521 16.716 13.379 1 4967700 1496 1935 1376 1396 1762 1762 ALAGCDFLTISPK 13 Unmodified _ALAGCDFLTISPK_ 0 0 0 P37837 P37837 P37837 TALDO1 Transaldolase MULTI-MSMS 210214_Eclipse_Hela_QC 696.864074707031 2 696.86322 1391.71189 1.0098 0.0007037 -0.26056 -0.00018158 0.74925 0.00052212 696.863134719911 77.899 0.69759 77.899 77.572 78.269 0 54 13 5 0 0 0 2.6351E-06 1 88806 113.47 87.913 1 115970000 1497 1222 1377 1397 1763 1763 ALAILSQPTPSLVVDHER 18 Unmodified _ALAILSQPTPSLVVDHER_ 0 0 0 Q6PL18 Q6PL18 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 649.36279296875 3 649.361702 1945.06328 1.0582 0.00068714 0.26679 0.00017325 1.325 0.00086039 649.36195666612 75.527 0.62695 75.527 75.253 75.88 0 34 12 4 0 0 0 0.026026 1 85727 26.837 23.117 1 8457600 1498 2468 1378 1398 1764 1764 ALAIYEGQLGPDNPNVAR 18 Unmodified _ALAIYEGQLGPDNPNVAR_ 0 0 0 Q9NSK0 Q9NSK0 Q9NSK0 KLC4 Kinesin light chain 4 MULTI-MSMS 210214_Eclipse_Hela_QC 949.995300292969 2 949.491964 1896.96938 1.6174 0.0015357 0.45059 0.00042783 2.068 0.0019636 949.49179258858 71.066 0.39877 71.066 70.87 71.268 0 17 7 3 0 0 0 0.046549 1 79523 41.401 32.447 1 2512300 1499 3644 1379 1399 1765 1765 ALALDCEMVGVGPK 14 Unmodified _ALALDCEMVGVGPK_ 0 0 0 Q9GZR2 Q9GZR2 Q9GZR2 REXO4 RNA exonuclease 4 MULTI-MSMS 210214_Eclipse_Hela_QC 730.369079589844 2 730.367812 1458.72107 1.6223 0.0011849 -0.37696 -0.00027532 1.2454 0.00090958 730.367834364679 70.94 0.69751 70.94 70.72 71.418 0 35 13 4 0 0 0 1.8358E-06 1 79235 105.86 78.749 1 8577900 1500 3391 1380 1400 1766 1766 ALALNCFAPINDQEGAEAK 19 Unmodified _ALALNCFAPINDQEGAEAK_ 0 0 0 Q96T88 Q96T88 Q96T88 UHRF1 E3 ubiquitin-protein ligase UHRF1 MULTI-MSMS 210214_Eclipse_Hela_QC 1016.99523925781 2 1016.49385 2030.97314 1.2438 0.0012643 -0.36625 -0.00037229 0.87751 0.00089199 1016.99521661787 78.538 0.59654 78.538 78.269 78.866 0 35 11 4 0 0 0 0.0018297 1 89852 63.76 58.376 1 12300000 1501 3150 1381 1401 1767 1767 ALALQLQNQR 10 Unmodified _ALALQLQNQR_ 0 0 0 Q9P0U3 Q9P0U3 Q9P0U3 SENP1 Sentrin-specific protease 1 MULTI-MSMS 210214_Eclipse_Hela_QC 577.8359375 2 577.835654 1153.65676 0.76143 0.00043998 0.18156 0.00010491 0.94298 0.00054489 577.835716817278 43.649 0.29813 43.649 43.494 43.792 0 9 5 2 0 0 0 0.00014464 1 40859 104.45 81.019 1 2442300 1502 3790 1382 1402 1768 1768 ALAMGYKPK 9 Unmodified _ALAMGYKPK_ 0 0 1 P55084 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase MULTI-MSMS 210214_Eclipse_Hela_QC 489.776062011719 2 489.775688 977.536823 0.57426 0.00028126 -1.1368 -0.00055679 -0.56256 -0.00027553 489.774744376549 23.124 0.44847 23.124 22.853 23.301 0 19 8 3 0 0 0 0.058211 1 11590 68.915 53.476 1 13260000 1503 1533 1383 1403 1769 1769 ALANESGLNFLAIK 14 Unmodified _ALANESGLNFLAIK_ 0 0 0 Q8NB90 Q8NB90 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 MULTI-MSMS 210214_Eclipse_Hela_QC 730.910339355469 2 730.909016 1459.80348 1.4806 0.0010822 -0.12182 -8.9039E-05 1.3588 0.00099314 730.90898077827 87.832 0.5969 87.832 87.433 88.03 0 29 11 3 0 0 0 0.00033844 1 102568 67.726 53.428 1 4172100 1504 2723 1384 1404 1770 1770 ALANSLACQGK 11 Unmodified _ALANSLACQGK_ 0 0 0 P04075 P04075 P04075 ALDOA Fructose-bisphosphate aldolase A MULTI-MSMS 210214_Eclipse_Hela_QC 566.792846679688 2 566.792598 1131.57064 0.67618 0.00038325 -0.16991 -9.6302E-05 0.50627 0.00028695 566.792629798476 25.635 0.99526 25.635 25.363 26.358 0 44 19 4 0 0 0 1.8605E-30 1 15044 208.37 140.39 1 628440000 1505 655 1385 1405 1771 1771 ALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEK 43 Unmodified _ALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEK_ 0 0 0 P05386 P05386 P05386 RPLP1 60S acidic ribosomal protein P1 MULTI-MSMS 210214_Eclipse_Hela_QC 1270.98669433594 3 1270.31441 3807.92139 2.2723 0.0028866 -0.51376 -0.00065263 1.7586 0.002234 1270.98199018273 103.26 1.3427 103.26 102.84 104.18 0 153 26 9 0 0 0 2.3547E-16 1 123835 70.346 68.708 1 255250000 1506 685 1386 1406 1772 1772 ALAPEYAK 8 Unmodified _ALAPEYAK_ 0 0 0 P07237 P07237 P07237 P4HB Protein disulfide-isomerase MULTI-MSMS 210214_Eclipse_Hela_QC 431.737091064453 2 431.737086 861.459619 -0.29819 -0.00012874 0.74357 0.00032103 0.44538 0.00019229 431.737420976616 24.691 0.84406 24.691 24.469 25.313 0 38 16 4 0 0 0 0.0088156 1 13760 68.787 11.506 1 152180000 1507 717 1387 1407 1773 1773 ALAPLLLAFVTK 12 Unmodified _ALAPLLLAFVTK_ 0 0 0 P46060 P46060 P46060 RANGAP1 Ran GTPase-activating protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 628.903564453125 2 628.902474 1255.7904 2.3481 0.0014768 -1.0547 -0.0006633 1.2935 0.00081346 628.901769340182 108.23 0.29868 108.23 108.11 108.41 0 16 5 4 0 0 0 0.00018292 1 131038 87.298 82.515 1 15994000 1508 1301 1388 1408 1774 1774 ALAPPDVHHER 11 Unmodified _ALAPPDVHHER_ 0 0 0 Q8NEW0 Q8NEW0 Q8NEW0 SLC30A7 Zinc transporter 7 MULTI-MSMS 210214_Eclipse_Hela_QC 414.550689697266 3 414.551033 1240.63127 -0.14794 -6.1327E-05 -0.87195 -0.00036147 -1.0199 -0.00042279 414.550959271802 20.144 0.79564 20.144 19.767 20.563 0 32 15 3 0 0 0 0.03891 1 7537 28.764 19.332 1 3185500 1509 2759 1389 1409 1775 1775 ALAPTWEQLALGLEHSETVK 20 Unmodified _ALAPTWEQLALGLEHSETVK_ 0 0 0 Q8NBS9 Q8NBS9 Q8NBS9 TXNDC5 Thioredoxin domain-containing protein 5 MULTI-MSMS 210214_Eclipse_Hela_QC 732.057495117188 3 731.723188 2192.14773 2.0031 0.0014657 0.22554 0.00016504 2.2286 0.0016308 732.057628245944 100.28 1.1936 100.28 99.754 100.95 0 41 23 2 0 0 0 4.048E-06 1 119637 81.356 67.194 1 60604000 1510 2735 1390 1410 1776 1776 ALAQEDQGAGEVER 14 Unmodified _ALAQEDQGAGEVER_ 0 0 0 O15020 O15020 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 MULTI-MSMS 210214_Eclipse_Hela_QC 736.853454589844 2 736.852426 1471.6903 0.92381 0.00068071 0.11602 8.5487E-05 1.0398 0.0007662 736.852653978621 25.704 0.24906 25.704 25.512 25.761 0 8 4 2 0 0 0 0.0002136 1 15315 69.979 53.406 1 3450600 1511 231 1391 1411 1777 1777 ALAQLSLSR 9 Unmodified _ALAQLSLSR_ 0 0 0 Q6XQN6 Q6XQN6 Q6XQN6 NAPRT Nicotinate phosphoribosyltransferase MULTI-MSMS 210214_Eclipse_Hela_QC 479.788299560547 2 479.787641 957.56073 0.60935 0.00029236 0.073829 3.5422E-05 0.68318 0.00032778 479.787621715725 47.505 0.64654 47.505 47.125 47.771 0 28 12 3 0 0 0 0.0030512 1 46174 71.379 14.099 1 6291800 1512 2488 1392 1412 1778 1778 ALASGTEASSTDPGAPGGPGGAEGPMAK 28 Unmodified _ALASGTEASSTDPGAPGGPGGAEGPMAK_ 0 0 0 Q16763 Q16763 Q16763 UBE2S Ubiquitin-conjugating enzyme E2 S MULTI-MSMS 210214_Eclipse_Hela_QC 1221.56872558594 2 1221.06609 2440.11763 1.086 0.001326 0.38515 0.00047029 1.4711 0.0017963 1222.06885536092 46.526 0.39788 46.526 46.28 46.677 0 19 7 4 0 0 0 0.028637 1 44829 30.536 27.973 1 4049000 1513 2251 1393 1413 1779 1779 ALASIDSK 8 Unmodified _ALASIDSK_ 0 0 0 P18206 P18206 P18206 VCL Vinculin MULTI-MSMS 210214_Eclipse_Hela_QC 403.231048583984 2 402.726718 803.438883 -0.031001 -1.2485E-05 3.4139 0.0013749 3.3829 0.0013624 402.727440077828 22.919 1.2445 22.919 22.156 23.401 0 32 24 2 0 0 0 0.0068895 2 11304 74.255 21.956 1 17801000 1514 952 1394 1414 1780;1781 1780 ALASILLQDHIR 12 Unmodified _ALASILLQDHIR_ 0 0 0 Q6DD88 Q6DD88 Q6DD88 ATL3 Atlastin-3 MULTI-MSMS 210214_Eclipse_Hela_QC 450.6015625 3 450.601504 1348.78268 -0.25759 -0.00011607 -0.20376 -9.1815E-05 -0.46136 -0.00020789 450.60140158804 67.043 0.61613 67.043 66.747 67.363 0 28 12 4 0 0 0 0.04522 1 73655 20.009 6.2005 1 11606000 1515 2408 1395 1415 1782 1782 ALASILLQDHIR 12 Unmodified _ALASILLQDHIR_ 0 0 0 Q6DD88 Q6DD88 Q6DD88 ATL3 Atlastin-3 MULTI-MSMS 210214_Eclipse_Hela_QC 675.399047851562 2 675.398618 1348.78268 0.44803 0.0003026 -0.2978 -0.00020113 0.15024 0.00010147 675.398613896541 67.021 0.43211 67.021 66.797 67.229 0 12 8 2 0 0 0 0.00038817 1 73860 73.887 66.991 1 5738000 1516 2408 1395 1415 1783 1783 ALASLMTYK 9 Unmodified _ALASLMTYK_ 0 0 0 P00367;P49448 P00367 P00367 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 499.273345947266 2 499.272978 996.531403 0.80742 0.00040312 0.28219 0.00014089 1.0896 0.00054401 499.273088865927 54.463 0.88514 54.463 54.088 54.973 0 37 17 4 0 0 0 0.011865 1 55949 52.482 20.34 1 20319000 1517 620 1396 1416 1784 1784 ALASQLQDSLK 11 Unmodified _ALASQLQDSLK_ 0 0 0 P18206 P18206 P18206 VCL Vinculin MULTI-MSMS 210214_Eclipse_Hela_QC 587.328002929688 2 587.327328 1172.6401 0.71925 0.00042244 -1.7915 -0.0010522 -1.0722 -0.00062975 587.325514056726 49.756 1.0423 49.756 49.187 50.229 0 52 20 5 0 0 0 2.4058E-13 1 49511 160.59 119.81 1 51836000 1518 952 1397 1417 1785 1785 ALAVGGLGSIIR 12 Unmodified _ALAVGGLGSIIR_ 0 0 0 Q9BPX5 Q9BPX5 Q9BPX5 ARPC5L Actin-related protein 2/3 complex subunit 5-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 563.851196289062 2 563.850773 1125.68699 0.60131 0.00033905 -4.1018 -0.0023128 -3.5005 -0.0019737 563.848464946944 78.543 0.99538 78.543 77.92 78.916 0 53 19 3 0 0 0 0.00029181 1 89991 79.974 54.415 1 20435000 1519 3210 1398 1418 1786 1786 ALAVSDLNR 9 Unmodified _ALAVSDLNR_ 0 0 0 P11498 P11498 P11498 PC Pyruvate carboxylase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 479.769500732422 2 479.769448 957.524344 0.018658 8.9516E-06 0.20437 9.8052E-05 0.22303 0.000107 479.769463967345 36.282 0.69221 36.282 35.878 36.571 0 33 13 3 0 0 0 0.019295 1 30216 49.097 5.3625 1 20855000 1520 835 1399 1419 1787 1787 ALAVVYGPHEIR 12 Unmodified _ALAVVYGPHEIR_ 0 0 0 Q9NPD3 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 MULTI-MSMS 210214_Eclipse_Hela_QC 442.250885009766 3 442.250583 1323.72992 0.42495 0.00018794 0.13757 6.0841E-05 0.56252 0.00024878 442.250672376407 43.612 0.59762 43.612 43.344 43.942 0 36 11 4 0 0 0 0.053355 1 40689 18.731 7.1983 1 14914000 1521 3583 1400 1420 1788 1788 ALAYFEQLK 9 Unmodified _ALAYFEQLK_ 0 0 0 O43592 O43592 O43592 XPOT Exportin-T MULTI-MSMS 210214_Eclipse_Hela_QC 541.798034667969 2 541.797675 1081.5808 0.6735 0.0003649 0.086858 4.706E-05 0.76036 0.00041196 541.797651568719 63.63 0.79663 63.63 63.274 64.071 0 43 15 4 0 0 0 0.0068491 1 68982 60.478 46.898 1 16087000 1522 314 1401 1421 1789 1789 ALCDLGPWVK 10 Unmodified _ALCDLGPWVK_ 0 0 0 Q8N0U8 Q8N0U8 Q8N0U8 VKORC1L1 Vitamin K epoxide reductase complex subunit 1-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 580.3056640625 2 579.802434 1157.59032 0.72225 0.00041876 0.085365 4.9495E-05 0.80762 0.00046826 579.802555169822 72.347 0.89569 72.347 72.015 72.911 0 40 17 3 0 0 0 0.0060463 1 81127 54.776 41.322 1 7088300 1523 2663 1402 1422 1790 1790 ALCDNVDTR 9 Unmodified _ALCDNVDTR_ 0 0 0 P49589 P49589 P49589 CARS Cysteine--tRNA ligase, cytoplasmic MULTI-MSMS 210214_Eclipse_Hela_QC 532.246032714844 2 532.24548 1062.47641 0.52736 0.00028069 -0.99034 -0.0005271 -0.46297 -0.00024641 532.245470422029 23.111 0.59809 23.111 22.803 23.401 0 24 11 3 0 0 0 0.057948 1 11723 35.445 14.82 1 14857000 1524 1378 1403 1423 1791 1791 ALCDPLEEVR 10 Unmodified _ALCDPLEEVR_ 0 0 0 Q92616 Q92616 Q92616 GCN1L1 Translational activator GCN1 MULTI-MSMS 210214_Eclipse_Hela_QC 601.799072265625 2 601.297713 1200.58087 0.36916 0.00022198 -0.039949 -2.4021E-05 0.32922 0.00019796 601.297776608732 61.602 0.69661 61.602 61.293 61.989 0 42 13 4 0 0 0 0.00094132 1 66076 80.239 59.337 1 15502000 1525 2894 1404 1424 1792 1792 ALCDVGTAISCSR 13 Unmodified _ALCDVGTAISCSR_ 0 0 0 Q9BQB6 Q9BQB6 Q9BQB6 VKORC1 Vitamin K epoxide reductase complex subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 705.329895019531 2 705.329218 1408.64388 1.2479 0.0008802 -0.16249 -0.00011461 1.0854 0.00076559 705.329266436871 47.584 0.5965 47.584 47.324 47.921 0 32 11 4 0 0 0 1.7594E-08 1 46314 119.53 99.742 1 18526000 1526 3224 1405 1425 1793 1793 ALCELESGIPAAESQIVYAERPLTDNHR 28 Unmodified _ALCELESGIPAAESQIVYAERPLTDNHR_ 0 0 1 Q5TDH0 Q5TDH0 Q5TDH0 DDI2 Protein DDI1 homolog 2 MULTI-MSMS 210214_Eclipse_Hela_QC 785.642456054688 4 785.642379 3138.54041 0.93652 0.00073577 -0.18013 -0.00014151 0.75639 0.00059426 785.893206352704 84.115 0.74707 84.115 83.703 84.45 0 47 14 5 0 0 0 0.00042904 1 97349 39.783 29.267 1 8850000 1527 2369 1406 1426 1794 1794 ALCGLDESK 9 Unmodified _ALCGLDESK_ 0 0 0 P36776 P36776 P36776 LONP1 Lon protease homolog, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 496.739379882812 2 496.739499 991.464446 0.16021 7.9581E-05 0.051405 2.5535E-05 0.21161 0.00010512 496.739611511417 26.587 0.84637 26.587 26.308 27.154 0 40 16 3 0 0 0 0.00047065 1 16608 101.72 60.219 1 19199000 1528 1210 1407 1427 1795 1795 ALCIDQLDVFLQK 13 Unmodified _ALCIDQLDVFLQK_ 0 0 0 Q5T8P6 Q5T8P6 Q5T8P6 RBM26 RNA-binding protein 26 MULTI-MSMS 210214_Eclipse_Hela_QC 781.916809082031 2 781.915984 1561.81741 1.0388 0.00081228 0.037465 2.9294E-05 1.0763 0.00084157 781.91579988963 105.6 0.39878 105.6 105.48 105.87 0 9 7 2 0 0 0 0.00097488 1 127426 62.303 55.919 1 11796000 1529 2363 1408 1428 1796 1796 ALCLKPEIEYGR 12 Unmodified _ALCLKPEIEYGR_ 0 0 1 CON__Q28065 CON__Q28065 CON__Q28065 MULTI-MSMS 210214_Eclipse_Hela_QC 483.590972900391 3 483.590388 1447.74933 0.36255 0.00017532 0.097863 4.7326E-05 0.46041 0.00022265 483.590442847874 51.866 0.64741 51.866 51.548 52.195 0 21 12 2 0 0 0 0.00024923 1 52418 71.176 63.141 1 11202000 + 1530 81 1409 1429 1797 1797 ALCQITDSTMLQAIER 16 Unmodified _ALCQITDSTMLQAIER_ 0 0 0 Q9Y678 Q9Y678 Q9Y678 COPG1 Coatomer subunit gamma-1 MULTI-MSMS 210214_Eclipse_Hela_QC 925.484008789062 2 925.460961 1848.90737 1.532 0.0014178 1.1492 0.0010636 2.6812 0.0024814 925.963490557385 89.884 1.2422 89.884 89.461 90.704 0 69 24 5 0 0 0 5.0405E-11 2 105431 122.39 98.787 1 23817000 1531 4138 1410 1430 1798;1799 1798 ALCQKPEISNGK 12 Unmodified _ALCQKPEISNGK_ 0 0 1 CON__ENSEMBL:ENSBTAP00000034412 CON__ENSEMBL:ENSBTAP00000034412 CON__ENSEMBL:ENSBTAP00000034412 MULTI-MSMS 210214_Eclipse_Hela_QC 672.85107421875 2 672.850644 1343.68673 0.35209 0.00023691 -0.73137 -0.0004921 -0.37927 -0.0002552 672.850534634651 19.296 0.44803 19.296 19.12 19.568 0 19 8 4 0 0 0 0.0293 1 6165 66.27 54.78 1 5127400 + 1532 41 1411 1431 1800 1800 ALCSFVTEDEVEWMR 15 Unmodified _ALCSFVTEDEVEWMR_ 0 0 0 P82933 P82933 P82933 MRPS9 28S ribosomal protein S9, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 936.421447753906 2 936.418762 1870.82297 1.4829 0.0013886 -0.46438 -0.00043485 1.0185 0.00095374 936.919773355069 95.205 0.54644 95.205 94.975 95.521 0 34 10 4 0 0 0 0.00078188 1 112936 56.225 50.732 1 4876200 1533 1771 1412 1432 1801 1801 ALCYLVLK 8 Unmodified _ALCYLVLK_ 0 0 0 Q15785 Q15785 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 MULTI-MSMS 210214_Eclipse_Hela_QC 490.285308837891 2 490.285889 978.557224 0.56288 0.00027597 -0.52786 -0.0002588 0.035019 1.7169E-05 490.285614923168 65.178 0.84673 65.178 64.755 65.602 0 38 16 3 0 0 0 0.026097 1 71003 50.855 35.416 1 12765000 1534 2214 1413 1433 1802 1802 ALDADIYSAIPTEK 14 Unmodified _ALDADIYSAIPTEK_ 0 0 0 Q8N999 Q8N999 Q8N999 C12orf29 Uncharacterized protein C12orf29 MULTI-MSMS 210214_Eclipse_Hela_QC 753.889587402344 2 753.887946 1505.76134 0.71115 0.00053613 0.22216 0.00016749 0.93331 0.00070361 753.888569440134 76.817 0.39832 76.817 76.577 76.975 0 16 7 3 0 0 0 0.0031429 1 87349 51.092 43.446 1 2963300 1535 2714 1414 1434 1803 1803 ALDCSSSIR 9 Unmodified _ALDCSSSIR_ 0 0 0 O94776 O94776 O94776 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 210214_Eclipse_Hela_QC 504.742645263672 2 504.742573 1007.47059 0.10739 5.4204E-05 0.22119 0.00011164 0.32858 0.00016585 504.742652193287 22.778 0.54821 22.778 22.553 23.102 0 13 10 2 0 0 0 0.00074181 1 11103 90.657 57.816 1 10680000 1536 513 1415 1435 1804 1804 ALDDISESIK 10 Unmodified _ALDDISESIK_ 0 0 0 Q9Y3B8 Q9Y3B8 Q9Y3B8 REXO2 Oligoribonuclease, mitochondrial MSMS 210214_Eclipse_Hela_QC 545.785095214844 2 545.784961 1089.55537 NaN NaN NaN NaN NaN NaN NaN 50.813 1 50.813 50.313 51.313 0 0 0 0 0.0066824 1 50983 78.939 49.563 1 1537 4053 1416 1436 1805 1805 ALDDMISTLK 10 Unmodified _ALDDMISTLK_ 0 0 0 P49368 P49368 P49368 CCT3 T-complex protein 1 subunit gamma MULTI-MSMS 210214_Eclipse_Hela_QC 553.79248046875 2 553.791732 1105.56891 0.60432 0.00033467 0.54988 0.00030452 1.1542 0.00063918 553.792121546416 73.385 1.6933 73.385 72.214 73.907 0 48 33 2 0 0 0 0.00034577 2 82809 93.111 59.314 1 68881000 1538 1369 1417 1437 1806;1807 1807 ALDEGDIALLK 11 Unmodified _ALDEGDIALLK_ 0 0 0 P35998 P35998 P35998 PSMC2 26S protease regulatory subunit 7 MULTI-MSMS 210214_Eclipse_Hela_QC 579.324645996094 2 579.324254 1156.63395 0.738 0.00042754 0.13993 8.1067E-05 0.87793 0.00050861 579.32429992122 72.24 0.94569 72.24 71.916 72.861 0 57 18 5 0 0 0 2.6069E-05 1 80939 108.74 54.775 1 34655000 1539 1201 1418 1438 1808 1808 ALDELFEAIEQK 12 Unmodified _ALDELFEAIEQK_ 0 0 0 Q27J81 Q27J81 Q27J81 INF2 Inverted formin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 703.3642578125 2 703.364107 1404.71366 1.1635 0.00081836 0.045063 3.1695E-05 1.2086 0.00085005 703.364135210166 100.83 0.69696 100.83 100.6 101.3 0 37 13 4 0 0 0 0.0013536 1 120742 74.944 59.282 1 5923200 1540 2264 1419 1439 1809 1809 ALDEVTSSQPPPLPPPPPPAQETQEPSPILDSEETR 36 Unmodified _ALDEVTSSQPPPLPPPPPPAQETQEPSPILDSEETR_ 0 0 0 Q16643 Q16643 Q16643 DBN1 Drebrin MULTI-MSMS 210214_Eclipse_Hela_QC 1283.97546386719 3 1282.96885 3845.88471 2.1741 0.0027893 0.72339 0.00092808 2.8975 0.0037174 1283.63824599132 94.813 1.0385 94.813 94.334 95.372 0 73 20 6 0 0 0 0.046013 1 112223 12.499 10.954 1 3366100 1541 2242 1420 1440 1810 1810 ALDFIASK 8 Unmodified _ALDFIASK_ 0 0 0 P12814;Q08043;O43707 P12814;O43707 O43707 ACTN1;ACTN3;ACTN4 Alpha-actinin-1;Alpha-actinin-3;Alpha-actinin-4 MULTI-MSMS 210214_Eclipse_Hela_QC 433.578399658203 2 432.744911 863.475269 0.30852 0.00013351 0.023446 1.0146E-05 0.33197 0.00014366 432.744870294508 48.906 1.1286 48.906 48.457 49.585 0 55 22 4 0 0 0 0.0030272 3 47991 93.992 44.402 1 47640000 1542 329;853 1421 1441 1811;1812;1813 1812 ALDGAFTEENR 11 Unmodified _ALDGAFTEENR_ 0 0 0 Q9Y490 Q9Y490 Q9Y490 TLN1 Talin-1 MSMS 210214_Eclipse_Hela_QC 611.7880859375 2 611.788566 1221.56258 NaN NaN NaN NaN NaN NaN NaN 38.226 1 38.226 37.726 38.726 0 0 0 0 0.0040514 1 33137 76.228 49.771 1 1543 4084 1422 1442 1814 1814 ALDGPEQMELEEGK 14 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ALDGPEQMELEEGK_ 1 0 0 P62195 P62195 P62195 PSMC5 26S protease regulatory subunit 8 MULTI-MSMS 210214_Eclipse_Hela_QC 794.365173339844 2 794.363978 1586.7134 1.8423 0.0014634 -0.058945 -4.6824E-05 1.7833 0.0014166 794.364064716366 81.795 0.49637 81.795 81.501 81.998 0 27 9 4 0 0 0 6.8086E-05 1 94231 78.548 64.779 1 6619900 1544 1643 1423 1443 1815 1815 ALDIAENEMPGLMR 14 Unmodified _ALDIAENEMPGLMR_ 0 0 0 P23526 P23526 P23526 AHCY Adenosylhomocysteinase MULTI-MSMS 210214_Eclipse_Hela_QC 780.381652832031 2 780.381451 1558.74835 1.2422 0.00096941 -0.57725 -0.00045047 0.66498 0.00051894 780.381417678652 83.131 1.1824 83.131 82.521 83.703 0 65 24 5 0 0 0 1.922E-47 1 96095 215.87 189.2 1 114870000 1545 1026 1424 1444 1816 1816 ALDIDLDKPLADSEK 15 Unmodified _ALDIDLDKPLADSEK_ 0 0 1 O14617 O14617 O14617 AP3D1 AP-3 complex subunit delta-1 MULTI-MSMS 210214_Eclipse_Hela_QC 548.289184570312 3 548.28932 1641.84613 0.50405 0.00027636 0.4426 0.00024267 0.94664 0.00051904 548.289417728346 64.721 0.73126 64.721 64.472 65.203 0 31 14 4 0 0 0 0.0032803 1 70577 51.03 39.339 1 7403500 1546 192 1425 1445 1817 1817 ALDIPLVK 8 Unmodified _ALDIPLVK_ 0 0 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 210214_Eclipse_Hela_QC 434.778656005859 2 434.778754 867.542954 0.5371 0.00023352 0.16208 7.047E-05 0.69918 0.00030399 434.778716738791 67.735 0.79379 67.735 67.363 68.157 0 34 15 3 0 0 0 0.04829 1 74607 42.396 19.359 1 17892000 1547 2450 1426 1446 1818 1818 ALDLADMITR 10 Unmodified _ALDLADMITR_ 0 0 0 P49916 P49916 P49916 LIG3 DNA ligase 3 MULTI-MSMS 210214_Eclipse_Hela_QC 559.797729492188 2 559.797349 1117.58014 0.80851 0.0004526 -0.33311 -0.00018647 0.4754 0.00026613 559.797098617266 85.122 0.59726 85.122 84.748 85.346 0 26 11 3 0 0 0 0.0054889 1 98866 56.729 37.635 1 4641100 1548 1405 1427 1447 1819 1819 ALDLDSSCK 9 Unmodified _ALDLDSSCK_ 0 0 0 P31948 P31948 P31948 STIP1 Stress-induced-phosphoprotein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 504.736755371094 2 504.736957 1007.45936 0.13545 6.8369E-05 0.31697 0.00015999 0.45243 0.00022836 504.737138946881 27.527 1.0345 27.527 26.955 27.99 0 42 20 3 0 0 0 3.3797E-06 1 17752 145.63 89.623 1 95010000 1549 1153 1428 1448 1820 1820 ALDLFSDNAPPPELLEIINEDIAK 24 Unmodified _ALDLFSDNAPPPELLEIINEDIAK_ 0 0 0 Q15084 Q15084 Q15084 PDIA6 Protein disulfide-isomerase A6 MULTI-MSMS 210214_Eclipse_Hela_QC 880.127197265625 3 879.793448 2636.35851 0.94701 0.00083317 0.50111 0.00044087 1.4481 0.001274 880.12838565872 110.88 0.39799 110.88 110.65 111.05 0 23 6 5 0 0 0 4.6437E-07 1 134579 77.689 77.689 1 14272000 1550 2153 1429 1449 1821 1821 ALDLLDK 7 Unmodified _ALDLLDK_ 0 0 0 P28482 P28482 P28482 MAPK1 Mitogen-activated protein kinase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 394.231323242188 2 394.231636 786.448719 0.3132 0.00012347 -0.29222 -0.0001152 0.020984 8.2725E-06 394.231441616828 48.68 0.68031 48.68 48.457 49.137 0 20 13 2 0 0 0 0.055076 1 48116 46.426 3.9513 1 2966800 1551 1091 1430 1450 1822 1822 ALDLLNNK 8 Unmodified _ALDLLNNK_ 0 0 0 Q9H583 Q9H583 Q9H583 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 450.761047363281 2 450.761092 899.507631 0.40588 0.00018295 -0.37592 -0.00016945 0.029957 1.3504E-05 450.760999705423 44.498 1.2432 44.498 43.892 45.135 0 60 24 4 0 0 0 0.013655 1 41398 61.561 22.755 1 89886000 1552 3476 1431 1451 1823 1823 ALDLLYGMVSK 11 Unmodified _ALDLLYGMVSK_ 0 0 0 O14617 O14617 O14617 AP3D1 AP-3 complex subunit delta-1 MULTI-MSMS 210214_Eclipse_Hela_QC 605.331970214844 2 605.331024 1208.6475 0.91037 0.00055107 0.008525 5.1605E-06 0.91889 0.00055623 605.331054141815 89.842 0.99339 89.842 89.461 90.455 0 32 19 2 0 0 0 0.00028942 1 105324 86.624 77.23 1 3683800 1553 192 1432 1452 1824 1824 ALDLNLK 7 Unmodified _ALDLNLK_ 0 0 0 P14927 P14927 P14927 UQCRB Cytochrome b-c1 complex subunit 7 MULTI-MSMS 210214_Eclipse_Hela_QC 393.740264892578 2 393.739628 785.464704 0.57903 0.00022799 -0.64166 -0.00025265 -0.062627 -2.4659E-05 393.739661008888 47.456 0.74615 47.456 47.175 47.921 0 39 14 4 0 0 0 0.014123 1 46170 71.378 8.3995 1 20528000 1554 893 1433 1453 1825 1825 ALDMEDFK 8 Unmodified _ALDMEDFK_ 0 0 0 CON__Q9TRI1 CON__Q9TRI1 CON__Q9TRI1 MULTI-MSMS 210214_Eclipse_Hela_QC 484.723907470703 2 484.723318 967.432083 0.47491 0.0002302 0.72733 0.00035256 1.2022 0.00058275 484.723717915352 53.014 1.0966 53.014 52.593 53.69 0 57 21 4 0 0 0 0.012771 1 53898 62.88 49.892 1 71986000 + 1555 114 1434 1454 1826 1826 ALDMLDAEK 9 Unmodified _ALDMLDAEK_ 0 0 0 Q9HAV4 Q9HAV4 Q9HAV4 XPO5 Exportin-5 MULTI-MSMS 210214_Eclipse_Hela_QC 503.249450683594 2 503.2497 1004.48485 0.53905 0.00027128 -0.13398 -6.7427E-05 0.40507 0.00020385 503.249448996532 48.345 0.62249 48.345 48.02 48.643 0 28 12 3 0 0 0 0.0082911 1 47379 56.729 35.782 1 9803900 1556 3539 1435 1455 1827 1827 ALDMSYDHKPEDEVELAR 18 Unmodified _ALDMSYDHKPEDEVELAR_ 0 0 1 O15355 O15355 O15355 PPM1G Protein phosphatase 1G MULTI-MSMS 210214_Eclipse_Hela_QC 530.502014160156 4 530.25066 2116.97353 0.82262 0.00043619 -0.21537 -0.0001142 0.60724 0.00032199 530.501398829521 51.521 0.89632 51.521 51.05 51.946 0 61 17 6 0 0 0 0.0021298 1 51861 30.534 26.873 1 32476000 1557 264 1436 1456 1828 1828 ALDMSYDHKPEDEVELAR 18 Unmodified _ALDMSYDHKPEDEVELAR_ 0 0 1 O15355 O15355 O15355 PPM1G Protein phosphatase 1G MULTI-MSMS 210214_Eclipse_Hela_QC 706.666748046875 3 706.665121 2116.97353 1.3712 0.00096897 0.085873 6.0683E-05 1.4571 0.0010297 706.66521718425 51.523 0.54734 51.523 51.249 51.797 0 19 10 2 0 0 0 0.00015141 1 51913 81.317 72.063 1 13853000 1558 264 1436 1456 1829 1829 ALDPPQLQVISNAMNLLR 18 Unmodified _ALDPPQLQVISNAMNLLR_ 0 0 0 Q7Z478 Q7Z478 Q7Z478 DHX29 ATP-dependent RNA helicase DHX29 MULTI-MSMS 210214_Eclipse_Hela_QC 997.051025390625 2 997.048592 1992.08263 1.3638 0.0013598 0.41808 0.00041684 1.7819 0.0017766 997.048753806097 108.98 0.19898 108.98 108.85 109.05 0 8 3 3 0 0 0 0.0048141 1 132027 38.189 29.46 1 4558500 1559 2544 1437 1457 1830 1830 ALDQSDNDMSAVYR 14 Unmodified _ALDQSDNDMSAVYR_ 0 0 0 Q49A26 Q49A26 Q49A26 GLYR1 Putative oxidoreductase GLYR1 MULTI-MSMS 210214_Eclipse_Hela_QC 792.852111816406 2 792.851569 1583.68859 1.3125 0.0010406 -1.0922 -0.00086597 0.2203 0.00017467 792.850489942699 48.417 0.47588 48.417 48.12 48.596 0 21 9 3 0 0 0 4.6629E-05 2 47638 93.258 83.026 1 5111000 1560 2283 1438 1458 1831;1832 1832 ALDSDMQTLVYENYNK 16 Unmodified _ALDSDMQTLVYENYNK_ 0 0 0 Q9UID3 Q9UID3 Q9UID3 VPS51 Vacuolar protein sorting-associated protein 51 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 952.9443359375 2 952.440748 1902.86694 0.91043 0.00086713 -0.017562 -1.6727E-05 0.89286 0.0008504 952.441391178841 78.674 0.44728 78.674 78.419 78.866 0 18 8 3 0 0 0 0.0073316 1 90038 39.917 26.489 1 3239500 1561 3885 1439 1459 1833 1833 ALDSNSLENDDLSAPGREPGHFNPESR 27 Unmodified _ALDSNSLENDDLSAPGREPGHFNPESR_ 0 0 1 Q32MZ4 Q32MZ4 Q32MZ4 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 732.093017578125 4 731.84059 2923.33326 1.4873 0.0010885 -0.20397 -0.00014927 1.2834 0.00093922 732.091502102902 54.098 1.1843 54.098 53.341 54.526 0 56 23 5 0 0 0 0.0094517 1 55654 32.434 26.531 1 9460200 1562 2272 1440 1460 1834 1834 ALDSVVSDR 9 Unmodified _ALDSVVSDR_ 0 0 0 Q8NCG7 Q8NCG7 Q8NCG7 DAGLB Sn1-specific diacylglycerol lipase beta MULTI-MSMS 210214_Eclipse_Hela_QC 481.252014160156 2 481.251089 960.487624 0.13552 6.5218E-05 -0.35096 -0.0001689 -0.21544 -0.00010368 481.251263837431 31.269 0.74634 31.269 30.873 31.619 0 22 14 2 0 0 0 0.038489 1 23188 40.352 19.797 1 4154800 1563 2743 1441 1461 1835 1835 ALDTLIQSGPALSHLVSQTTAQMGQPQAPMGSYQR 35 Unmodified _ALDTLIQSGPALSHLVSQTTAQMGQPQAPMGSYQR_ 0 0 0 Q9HCD5 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 MULTI-MSMS 210214_Eclipse_Hela_QC 1228.95434570312 3 1228.28205 3681.82431 2.1081 0.0025894 0.43473 0.00053397 2.5429 0.0031233 1228.61677260469 104.96 0.39951 104.96 104.73 105.13 0 22 7 5 0 0 0 1.1936E-10 1 126455 77.733 76.008 1 14343000 1564 3557 1442 1462 1836 1836 ALDTMNFDVIK 11 Oxidation (M) _ALDTM(Oxidation (M))NFDVIK_ ALDTM(1)NFDVIK ALDTM(92)NFDVIK 0 1 0 Q13310;P11940 Q13310;P11940 P11940 PABPC4;PABPC1 Polyadenylate-binding protein 4;Polyadenylate-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 641.822509765625 2 641.821021 1281.62749 0.43792 0.00028107 0.3585 0.00023009 0.79642 0.00051116 641.821386250704 64.581 0.73407 64.581 64.27 65.004 0 28 15 3 0 0 0 0.00052894 2 70298 91.867 56.511 1 11176000 1565 842;1970 1443 1463 1837;1838 1838 200 ALDTMNFDVIK 11 Unmodified _ALDTMNFDVIK_ 0 0 0 Q13310;P11940 Q13310;P11940 P11940 PABPC4;PABPC1 Polyadenylate-binding protein 4;Polyadenylate-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 633.822937011719 2 633.823563 1265.63257 1.0345 0.00065569 -0.16999 -0.00010774 0.86451 0.00054794 633.823571858184 79.138 1.6415 79.138 78.369 80.01 0 111 32 5 0 0 0 1.0129E-05 2 90411 114.5 81.656 1 159160000 1566 842;1970 1443 1464 1839;1840 1839 ALDVADLQK 9 Unmodified _ALDVADLQK_ 0 0 0 Q6NUQ4 Q6NUQ4 Q6NUQ4 TMEM214 Transmembrane protein 214 MULTI-MSMS 210214_Eclipse_Hela_QC 486.772888183594 2 486.771657 971.528761 0.92696 0.00045122 0.27589 0.00013429 1.2029 0.00058551 486.771740932802 45.243 0.69632 45.243 44.986 45.682 0 20 13 2 0 0 0 0.0023962 1 43142 75.692 14.797 1 10049000 1567 2429 1444 1465 1841 1841 ALDVGSGSGILTACFAR 17 Unmodified _ALDVGSGSGILTACFAR_ 0 0 0 P22061 P22061 P22061 PCMT1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase MULTI-MSMS 210214_Eclipse_Hela_QC 848.431884765625 2 847.930154 1693.84575 1.1659 0.00098861 -1.7481 -0.0014823 -0.58219 -0.00049366 847.930980479105 86.368 0.74582 86.368 86.041 86.787 0 38 14 4 0 0 0 1.5572E-07 1 100643 126.1 107.79 1 10811000 1568 1004 1445 1466 1842 1842 ALDVIQAGK 9 Unmodified _ALDVIQAGK_ 0 0 0 O75937 O75937 O75937 DNAJC8 DnaJ homolog subfamily C member 8 MULTI-MSMS 210214_Eclipse_Hela_QC 457.769134521484 2 457.768917 913.523281 0.1172 5.3648E-05 -3.5201 -0.0016114 -3.4029 -0.0015578 457.769002984546 34.972 0.49246 34.972 34.75 35.243 0 30 9 4 0 0 0 0.00078128 1 28579 89.046 49.089 1 25917000 1569 499 1446 1467 1843 1843 ALDVMVSTFHK 11 Oxidation (M) _ALDVM(Oxidation (M))VSTFHK_ ALDVM(1)VSTFHK ALDVM(87)VSTFHK 0 1 0 P26447 P26447 P26447 S100A4 Protein S100-A4 MULTI-MSMS 210214_Eclipse_Hela_QC 632.323974609375 2 632.323731 1262.63291 0.058118 3.675E-05 0.07579 4.7924E-05 0.13391 8.4674E-05 632.323756185505 41.382 0.59618 41.382 41.059 41.655 0 21 11 2 0 0 0 0.00074434 1 37514 86.624 66.838 1 11656000 1570 1060 1447 1468 1844 1844 273 ALDVMVSTFHK 11 Oxidation (M) _ALDVM(Oxidation (M))VSTFHK_ ALDVM(1)VSTFHK ALDVM(54)VSTFHK 0 1 0 P26447 P26447 P26447 S100A4 Protein S100-A4 MULTI-MSMS 210214_Eclipse_Hela_QC 421.884887695312 3 421.884913 1262.63291 0.23477 9.9048E-05 -0.011262 -4.7511E-06 0.22351 9.4297E-05 421.884919249498 52.537 0.79653 52.537 52.096 52.892 0 45 15 4 0 0 0 0.0019331 1 53219 54.471 45.984 1 29633000 1571 1060 1447 1468 1845 1845 273 ALDVMVSTFHK 11 Oxidation (M) _ALDVM(Oxidation (M))VSTFHK_ ALDVM(1)VSTFHK ALDVM(77)VSTFHK 0 1 0 P26447 P26447 P26447 S100A4 Protein S100-A4 MULTI-SECPEP 210214_Eclipse_Hela_QC 422.569213867188 3 421.884913 1262.63291 -0.35041 -0.00014783 0.081438 3.4358E-05 -0.26898 -0.00011348 421.884942699977 41.382 0.94409 41.382 41.009 41.953 0 53 18 4 0 0 0 0.0028724 1 37666 76.843 64.63 1 61376000 1572 1060 1447 1468 1846 1846 273 ALDVMVSTFHK 11 Unmodified _ALDVMVSTFHK_ 0 0 0 P26447 P26447 P26447 S100A4 Protein S100-A4 MULTI-MSMS 210214_Eclipse_Hela_QC 416.553070068359 3 416.553274 1246.63799 0.29401 0.00012247 -0.32939 -0.00013721 -0.035379 -1.4737E-05 416.553375989153 52.543 2.0918 52.543 52.046 54.138 0 124 41 6 0 0 0 0.00086344 3 53899 64.906 51.898 1 420580000 1573 1060 1447 1469 1847;1848;1849 1848 ALDVMVSTFHK 11 Unmodified _ALDVMVSTFHK_ 0 0 0 P26447 P26447 P26447 S100A4 Protein S100-A4 MULTI-MSMS 210214_Eclipse_Hela_QC 624.326782226562 2 624.326273 1246.63799 0.61118 0.00038157 0.16389 0.00010232 0.77506 0.00048389 624.326544823164 52.543 1.4947 52.543 52.096 53.59 0 98 29 5 0 0 0 1.764E-07 4 53195 142.92 114.52 1 207780000 1574 1060 1447 1469 1850;1851;1852;1853 1851 ALDYYMLR 8 Unmodified _ALDYYMLR_ 0 0 0 Q9Y490 Q9Y490 Q9Y490 TLN1 Talin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 522.763671875 2 522.762778 1043.511 1.0677 0.00055815 0.5894 0.00030811 1.6571 0.00086627 522.763181118604 65.796 0.39779 65.796 65.453 65.851 0 19 7 3 0 0 0 0.040424 1 71894 45.394 20.304 1 6800600 1575 4084 1448 1470 1854 1854 ALEAANADLEVK 12 Unmodified _ALEAANADLEVK_ 0 0 0 CON__P08730-1 CON__P08730-1 CON__P08730-1 MULTI-MSMS 210214_Eclipse_Hela_QC 622.329956054688 2 622.330067 1242.64558 0.30428 0.00018936 0.059374 3.695E-05 0.36365 0.00022631 622.330186370887 42.471 1.3899 42.471 41.854 43.244 0 67 27 4 0 0 0 7.3788E-16 1 38969 166.33 4.691 1 70099000 + 1576 61 1449 1471 1855 1855 ALEAFETFK 9 Unmodified _ALEAFETFK_ 0 0 0 Q00796 Q00796 Q00796 SORD Sorbitol dehydrogenase MULTI-MSMS 210214_Eclipse_Hela_QC 528.273254394531 2 528.274032 1054.53351 -0.04955 -2.6176E-05 0.24906 0.00013157 0.19951 0.00010539 528.274067913826 62.327 0.78743 62.327 61.989 62.777 0 40 15 4 0 0 0 0.0019949 2 67049 78.334 60.01 1 35323000 1577 1807 1450 1472 1856;1857 1856 ALEAFETFKK 10 Unmodified _ALEAFETFKK_ 0 0 1 Q00796 Q00796 Q00796 SORD Sorbitol dehydrogenase MULTI-MSMS 210214_Eclipse_Hela_QC 592.321350097656 2 592.321514 1182.62847 0.76474 0.00045297 -0.28538 -0.00016904 0.47935 0.00028393 592.321225776369 43.581 0.64691 43.581 43.145 43.792 0 27 12 3 0 0 0 0.016618 2 40619 56.258 34.127 1 5819300 1578 1807 1451 1473 1858;1859 1858 ALEALVAK 8 Unmodified _ALEALVAK_ 0 0 0 P14550 P14550 P14550 AKR1A1 Alcohol dehydrogenase [NADP(+)] MULTI-MSMS 210214_Eclipse_Hela_QC 407.7548828125 2 407.755278 813.496004 -0.38723 -0.0001579 0.23629 9.635E-05 -0.15094 -6.1546E-05 407.755358602388 37.72 0.64809 37.72 37.397 38.045 0 26 12 3 0 0 0 0.0070751 1 32323 73.616 40.259 1 17799000 1579 881 1452 1474 1860 1860 ALEATTEHIR 10 Unmodified _ALEATTEHIR_ 0 0 0 Q9Y490 Q9Y490 Q9Y490 TLN1 Talin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 570.803527832031 2 570.80402 1139.59349 0.43465 0.0002481 -0.5496 -0.00031371 -0.11494 -6.5611E-05 570.803718287183 22.429 0.49754 22.429 22.255 22.753 0 13 9 2 0 0 0 1.499E-05 1 10593 117.89 82.594 1 13448000 1580 4084 1453 1475 1861 1861 ALEATTEHIR 10 Unmodified _ALEATTEHIR_ 0 0 0 Q9Y490 Q9Y490 Q9Y490 TLN1 Talin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 380.871246337891 3 380.871772 1139.59349 -0.1407 -5.3589E-05 -0.067765 -2.581E-05 -0.20846 -7.9398E-05 380.871644744547 22.425 0.34818 22.425 22.255 22.603 0 18 6 4 0 0 0 0.00076423 1 10603 70.1 49.813 1 9976600 1581 4084 1453 1475 1862 1862 ALEAVFGK 8 Unmodified _ALEAVFGK_ 0 0 0 P38159 P38159 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 417.7392578125 2 417.739628 833.464704 0.54132 0.00022613 0.018351 7.666E-06 0.55967 0.0002338 417.739594255796 45.983 1.095 45.983 45.582 46.677 0 56 21 4 0 0 0 0.0036917 1 43919 85.265 19.593 1 71212000 1582 1224 1454 1476 1863 1863 ALECFCQAASEVGK 14 Unmodified _ALECFCQAASEVGK_ 0 0 0 Q12769 Q12769 Q12769 NUP160 Nuclear pore complex protein Nup160 MULTI-MSMS 210214_Eclipse_Hela_QC 785.357421875 2 785.355433 1568.69631 1.4613 0.0011476 2.307 0.0018118 3.7683 0.0029594 785.358354500875 57.971 0.89604 57.971 57.562 58.458 0 37 17 4 0 0 0 0.00016183 1 60937 76.332 59.661 1 6070000 1583 1907 1455 1477 1864 1864 ALEDAFLAIDAK 12 Unmodified _ALEDAFLAIDAK_ 0 0 0 O15355 O15355 O15355 PPM1G Protein phosphatase 1G MULTI-MSMS 210214_Eclipse_Hela_QC 638.843383789062 2 638.84281 1275.67107 0.74388 0.00047522 0.52395 0.00033472 1.2678 0.00080994 638.843135855046 86.9 0.99444 86.9 86.588 87.582 0 42 19 3 0 0 0 0.00024858 1 101394 103.31 79.883 1 26504000 1584 264 1456 1478 1865 1865 ALEDFLASLR 10 Unmodified _ALEDFLASLR_ 0 0 0 Q8WXH0 Q8WXH0 Q8WXH0 SYNE2 Nesprin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 567.8115234375 2 567.811313 1133.60807 1.7226 0.00097813 -0.056871 -3.2292E-05 1.6658 0.00094584 567.81116020102 101.61 0.49744 101.61 101.35 101.84 0 20 9 3 0 0 0 0.016083 1 121741 48.283 24.128 1 713940 1585 2862 1457 1479 1866 1866 ALEDLAGFK 9 Unmodified _ALEDLAGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 210214_Eclipse_Hela_QC 482.261474609375 2 482.260925 962.507297 0.011724 5.6539E-06 -0.12615 -6.084E-05 -0.11443 -5.5186E-05 482.260995519554 61.755 0.6447 61.755 61.442 62.087 0 30 12 4 0 0 0 0.00097286 1 66306 85.064 49.184 1 6183400 1586 1300 1458 1480 1867 1867 ALEDLVDFK 9 Unmodified _ALEDLVDFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 210214_Eclipse_Hela_QC 525.280090332031 2 525.279315 1048.54408 0.96071 0.00050464 0.24527 0.00012883 1.206 0.00063347 525.279417033027 79.289 0.54719 79.289 78.965 79.513 0 19 10 2 0 0 0 0.003958 1 90834 67.993 52.494 1 8686200 1587 1300 1459 1481 1868 1868 ALEDMFDALEGK 12 Unmodified _ALEDMFDALEGK_ 0 0 0 P23786 P23786 P23786 CPT2 Carnitine O-palmitoyltransferase 2, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 669.817626953125 2 669.815935 1337.61732 1.9208 0.0012866 -0.52495 -0.00035162 1.3958 0.00093494 669.815667716974 101.37 0.64672 101.37 101.05 101.69 0 41 12 4 0 0 0 1.3594E-05 2 121306 107.24 104.53 1 10167000 1588 1030 1460 1482 1869;1870 1869 ALEEAGFK 8 Unmodified _ALEEAGFK_ 0 0 0 P17655 P17655 P17655 CAPN2 Calpain-2 catalytic subunit MULTI-MSMS 210214_Eclipse_Hela_QC 432.726196289062 2 432.726718 863.438883 -0.29552 -0.00012788 -0.19472 -8.4261E-05 -0.49024 -0.00021214 432.72652187629 26.321 0.34883 26.321 26.158 26.507 0 9 6 2 0 0 0 0.050241 1 16136 41.652 8.1019 1 6488100 1589 936 1461 1483 1871 1871 ALEEAGFK 8 Unmodified _ALEEAGFK_ 0 0 0 P17655 P17655 P17655 CAPN2 Calpain-2 catalytic subunit MULTI-MSMS 210214_Eclipse_Hela_QC 432.726867675781 2 432.726718 863.438883 -0.027467 -1.1886E-05 -0.35085 -0.00015182 -0.37831 -0.00016371 432.726653427968 28.313 0.43543 28.313 28.09 28.525 0 14 8 2 0 0 0 0.0034438 1 18981 87.284 16.143 1 15689000 1590 936 1461 1483 1872 1872 ALEEAMEQK 9 Unmodified _ALEEAMEQK_ 0 0 0 P35579 P35579 P35579 MYH9 Myosin-9 MULTI-MSMS 210214_Eclipse_Hela_QC 524.750427246094 2 524.752607 1047.49066 -0.86991 -0.00045649 0.046965 2.4645E-05 -0.82295 -0.00043184 524.752664886664 25.319 0.74619 25.319 24.915 25.661 0 24 14 2 0 0 0 3.3254E-05 1 14638 126.62 107.84 1 35030000 1591 1191 1462 1484 1873 1873 ALEEEEDDRPYDPEEEYDPER 21 Unmodified _ALEEEEDDRPYDPEEEYDPER_ 0 0 1 Q9BTC0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 MULTI-MSMS 210214_Eclipse_Hela_QC 876.031188964844 3 875.69642 2624.06743 1.2213 0.0010695 0.51694 0.00045268 1.7383 0.0015222 876.031354886328 56.093 0.54823 56.093 55.869 56.417 0 33 10 5 0 0 0 0.048118 1 58370 29.136 28.058 1 7753000 1592 3267 1463 1485 1874 1874 ALEEELAGLK 10 Unmodified _ALEEELAGLK_ 0 0 0 O95347 O95347 O95347 SMC2 Structural maintenance of chromosomes protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 536.798461914062 2 536.797872 1071.58119 1.2791 0.00068662 0.23341 0.00012529 1.5125 0.00081191 536.797905042342 60.923 0.64555 60.923 60.548 61.193 0 33 12 4 0 0 0 0.0022745 1 65114 67.993 30.801 1 14589000 1593 560 1464 1486 1875 1875 ALEEELEDLELGL 13 Unmodified _ALEEELEDLELGL_ 0 0 0 Q9BRP8 Q9BRP8 Q9BRP8 WIBG Partner of Y14 and mago MULTI-MSMS 210214_Eclipse_Hela_QC 1473.78527832031 1 1472.73665 1471.72937 2.9549 0.0043518 -0.88263 -0.0012999 2.0723 0.003052 1472.73612816755 110.72 0.14969 110.72 110.6 110.75 0 4 2 2 0 0 0 0.017596 1 134373 68.016 53.044 1 2046000 1594 3239 1465 1487 1876 1876 ALEEGLTPQEICDK 14 Unmodified _ALEEGLTPQEICDK_ 0 0 0 P56192 P56192 P56192 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 210214_Eclipse_Hela_QC 801.888854980469 2 801.88762 1601.76069 1.6986 0.0013621 0.1651 0.00013239 1.8637 0.0014945 801.887923537395 56.89 0.64603 56.89 56.567 57.213 0 39 12 4 0 0 0 1.3045E-30 2 59553 194.17 180.77 1 37223000 1595 1551 1466 1488 1877;1878 1877 ALEENNNFSK 10 Unmodified _ALEENNNFSK_ 0 0 0 Q93045 Q93045 Q93045 STMN2 Stathmin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 583.278137207031 2 583.277835 1164.54112 0.46313 0.00027013 0.083318 4.8598E-05 0.54645 0.00031873 583.27789970728 22.224 0.94493 22.224 21.957 22.902 0 47 18 4 0 0 0 6.4177E-13 2 10233 176.79 0 1 138470000 1596 2935 1467 1489 1879;1880 1879 ALEESESSQLISPPLAQAIR 20 Unmodified _ALEESESSQLISPPLAQAIR_ 0 0 0 P42166 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 210214_Eclipse_Hela_QC 1069.86267089844 2 1070.06823 2138.12191 0.81179 0.00086867 0.39381 0.0004214 1.2056 0.0012901 1070.5700637037 87.358 0.79504 87.358 86.886 87.681 0 59 15 5 0 0 0 2.3657E-20 2 101923 183.79 174.25 1 18546000 1597 1266 1468 1490 1881;1882 1882 ALEESNYELEGK 12 Unmodified _ALEESNYELEGK_ 0 0 0 CON__P13645;P13645;CON__P02535-1 CON__P13645 CON__P13645 KRT10 Keratin, type I cytoskeletal 10 MULTI-MSMS 210214_Eclipse_Hela_QC 691.829528808594 2 691.327721 1380.64089 0.30848 0.00021326 0.33381 0.00023077 0.64229 0.00044403 691.327889131538 39.493 0.7374 39.493 39.227 39.965 0 51 15 5 0 0 0 7.2757E-06 1 34759 112.3 100.93 1 77129000 + 1598 63 1469 1491 1883 1883 ALEEVPIHIEDPPFPSLR 18 Unmodified _ALEEVPIHIEDPPFPSLR_ 0 0 0 Q5VZK9 Q5VZK9 Q5VZK9 LRRC16A Leucine-rich repeat-containing protein 16A MULTI-MSMS 210214_Eclipse_Hela_QC 687.368469238281 3 687.033474 2058.07859 1.5829 0.0010875 0.47385 0.00032555 2.0567 0.001413 687.034001783898 95.448 0.64314 95.448 95.173 95.816 0 34 12 4 0 0 0 0.014918 1 113251 31.801 26.483 1 4475000 1599 2387 1470 1492 1884 1884 ALEFAPACHR 10 Unmodified _ALEFAPACHR_ 0 0 0 Q99615 Q99615 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 MULTI-MSMS 210214_Eclipse_Hela_QC 586.287170410156 2 586.287482 1170.56041 0.42534 0.00024937 -0.076211 -4.4682E-05 0.34913 0.00020469 586.287487073623 28.756 0.55658 28.756 28.525 29.082 0 21 11 3 0 0 0 0.0011799 1 19629 77.282 57.646 1 6472100 1600 3178 1471 1493 1885 1885 ALEFAPACHR 10 Unmodified _ALEFAPACHR_ 0 0 0 Q99615 Q99615 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 MULTI-MSMS 210214_Eclipse_Hela_QC 391.193969726562 3 391.19408 1170.56041 0.30792 0.00012046 -0.33159 -0.00012972 -0.023673 -9.2609E-06 391.193910315244 28.734 0.42458 28.734 28.563 28.988 0 14 8 2 0 0 0 0.02275 1 19632 26.889 20.001 1 7338100 1601 3178 1471 1493 1886 1886 ALEFGEPVLLVGDTGCGK 18 Unmodified _ALEFGEPVLLVGDTGCGK_ 0 0 0 Q9NU22 Q9NU22 Q9NU22 MDN1 Midasin MULTI-MSMS 210214_Eclipse_Hela_QC 931.974365234375 2 931.471851 1860.92915 2.0996 0.0019557 0.69108 0.00064372 2.7907 0.0025995 931.97383663268 97.679 0.54651 97.679 97.417 97.964 0 24 10 3 0 0 0 0.0012026 1 116283 62.89 53.203 1 3480900 1602 3654 1472 1494 1887 1887 ALEFIPSDQQNEMVR 15 Unmodified _ALEFIPSDQQNEMVR_ 0 0 0 Q14671 Q14671 Q14671 PUM1 Pumilio homolog 1 MULTI-MSMS 210214_Eclipse_Hela_QC 888.932495117188 2 888.932893 1775.85123 1.6001 0.0014224 -0.68971 -0.00061311 0.91036 0.00080925 888.932778437539 73.452 0.39835 73.452 73.26 73.658 0 24 7 4 0 0 0 0.0024276 1 82802 51.092 40.482 1 3343400 1603 2097 1473 1495 1888 1888 ALEFVQTESQK 11 Unmodified _ALEFVQTESQK_ 0 0 0 Q14789 Q14789 Q14789 GOLGB1 Golgin subfamily B member 1 MULTI-SECPEP 210214_Eclipse_Hela_QC 640.65771484375 2 640.330067 1278.64558 0.58631 0.00037543 0.32873 0.0002105 0.91504 0.00058593 640.330424614595 42.781 0.49762 42.781 42.448 42.945 0 20 9 3 0 0 0 0.029046 1 39508 71.614 53.389 1 5365800 1604 2112 1474 1496 1889 1889 ALEGLVYR 8 Unmodified _ALEGLVYR_ 0 0 0 Q9Y4R8 Q9Y4R8 Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 460.764221191406 2 460.763635 919.512717 0.76695 0.00035338 0.09383 4.3233E-05 0.86078 0.00039662 460.763694761125 50.204 0.69707 50.204 49.831 50.528 0 19 13 2 0 0 0 0.040424 1 50049 45.394 19.944 1 3406600 1605 4093 1475 1497 1890 1890 ALEGTLSELAAETDLPVVFVK 21 Unmodified _ALEGTLSELAAETDLPVVFVK_ 0 0 0 Q16881 Q16881 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic MULTI-MSMS 210214_Eclipse_Hela_QC 1102.10107421875 2 1101.59883 2201.18312 0.5886 0.0006484 0.17906 0.00019725 0.76766 0.00084565 1102.10067074472 108.63 0.29796 108.63 108.51 108.8 0 13 5 3 0 0 0 6.0154E-10 1 131573 113.35 113.35 1 21519000 1606 2261 1476 1498 1891 1891 ALEHAFQLEHIMDLTR 16 Unmodified _ALEHAFQLEHIMDLTR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 210214_Eclipse_Hela_QC 481.748809814453 4 481.749093 1922.96727 -0.069577 -3.3519E-05 -0.38747 -0.00018666 -0.45705 -0.00022018 481.999636456715 80.352 0.64457 80.352 80.111 80.755 0 30 12 3 0 0 0 0.024794 1 92365 26.365 21.363 1 5593500 1607 2070 1477 1499 1892 1892 ALEHFTDLYDIK 12 Unmodified _ALEHFTDLYDIK_ 0 0 0 Q00610 Q00610 Q00610 CLTC Clathrin heavy chain 1 MULTI-MSMS 210214_Eclipse_Hela_QC 488.917083740234 3 488.917158 1463.72965 0.61121 0.00029883 0.32149 0.00015718 0.9327 0.00045601 488.917268966234 68.575 1.1208 68.575 68.207 69.327 0 68 22 5 0 0 0 6.102E-05 1 75716 79.633 65.28 1 66926000 1608 1802 1478 1500 1893 1893 ALEHFTDLYDIK 12 Unmodified _ALEHFTDLYDIK_ 0 0 0 Q00610 Q00610 Q00610 CLTC Clathrin heavy chain 1 MULTI-MSMS 210214_Eclipse_Hela_QC 732.872924804688 2 732.872099 1463.72965 1.0466 0.00076702 0.22376 0.00016399 1.2703 0.000931 732.872165448157 68.573 0.72501 68.573 68.256 68.981 0 42 14 4 0 0 0 3.8153E-18 1 75768 178.08 133.77 1 31063000 1609 1802 1478 1500 1894 1894 ALEHSALAINHK 12 Unmodified _ALEHSALAINHK_ 0 0 0 P17812;Q9NRF8 P17812;Q9NRF8 P17812 CTPS1;CTPS2 CTP synthase 1;CTP synthase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 435.24267578125 3 435.242088 1302.70443 -0.11265 -4.903E-05 0.11576 5.0382E-05 0.0031061 1.3519E-06 435.242162678211 21.485 0.49838 21.485 21.161 21.659 0 20 9 3 0 0 0 1.8141E-12 1 9229 148.28 134.02 1 48893000 1610 939;3619 1479 1501 1895 1895 ALEHSALAINHK 12 Unmodified _ALEHSALAINHK_ 0 0 0 P17812;Q9NRF8 P17812;Q9NRF8 P17812 CTPS1;CTPS2 CTP synthase 1;CTP synthase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 652.360473632812 2 652.359493 1302.70443 0.22465 0.00014655 0.10064 6.5651E-05 0.32529 0.0002122 652.359461062821 21.485 0.29895 21.485 21.31 21.609 0 9 5 2 0 0 0 1.8049E-23 1 9247 216.12 183.12 1 16211000 1611 939;3619 1479 1501 1896 1896 ALEHVDGTHVCQLPEDQK 18 Unmodified _ALEHVDGTHVCQLPEDQK_ 0 0 0 P16144 P16144 P16144 ITGB4 Integrin beta-4 MULTI-MSMS 210214_Eclipse_Hela_QC 692.999755859375 3 692.665344 2074.9742 0.73314 0.00050782 -0.15769 -0.00010922 0.57545 0.0003986 692.999471652049 32.307 0.3493 32.307 32.162 32.511 0 12 6 2 0 0 0 0.058452 1 24844 10.246 6.8577 1 5045200 1612 911 1480 1502 1897 1897 ALEIIPR 7 Unmodified _ALEIIPR_ 0 0 0 Q99832 Q99832 Q99832 CCT7 T-complex protein 1 subunit eta MULTI-MSMS 210214_Eclipse_Hela_QC 406.25537109375 2 406.255446 810.496338 0.41749 0.00016961 2.7152 0.0011031 3.1327 0.0012727 406.255455954979 50.927 1.5173 50.927 49.981 51.498 0 81 30 5 0 0 0 0.0070962 1 50954 86.086 31.561 1 71058000 1613 3200 1481 1503 1898 1898 ALEIPGEELPGVCSAR 16 Unmodified _ALEIPGEELPGVCSAR_ 0 0 0 P22570 P22570 P22570 FDXR NADPH:adrenodoxin oxidoreductase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 849.932861328125 2 849.429987 1696.84542 1.4482 0.0012302 0.054606 4.6384E-05 1.5028 0.0012765 849.932279017726 79.171 1.0445 79.171 78.419 79.463 0 33 20 3 0 0 0 0.00028471 1 90644 67.022 56.499 1 7183600 1614 1011 1482 1504 1899 1899 ALEIYQTK 8 Unmodified _ALEIYQTK_ 0 0 0 Q07866 Q07866 Q07866 KLC1 Kinesin light chain 1 MULTI-MSMS 210214_Eclipse_Hela_QC 483.771209716797 2 483.26875 964.522947 0.36517 0.00017648 0.65776 0.00031787 1.0229 0.00049435 483.268925312786 34.707 0.5917 34.707 34.502 35.094 0 28 12 3 0 0 0 0.0051544 1 28141 80.229 44.044 1 7051100 1615 1878 1483 1505 1900 1900 ALELDPDNETYK 12 Unmodified _ALELDPDNETYK_ 0 0 0 O43765 O43765 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha MULTI-MSMS 210214_Eclipse_Hela_QC 704.336120605469 2 704.335546 1406.65654 0.83353 0.00058708 -0.21298 -0.00015001 0.62055 0.00043708 704.335461410245 52.338 0.64708 52.338 51.996 52.643 0 33 12 3 0 0 0 4.1964E-05 1 52989 99.973 94.432 1 22817000 1616 336 1484 1506 1901 1901 ALELDQER 8 Unmodified _ALELDQER_ 0 0 0 P35241 P35241 P35241 RDX Radixin MULTI-MSMS 210214_Eclipse_Hela_QC 487.752227783203 2 487.251089 972.487624 0.28886 0.00014075 -0.23877 -0.00011634 0.050086 2.4405E-05 487.25104768053 29.032 0.90454 29.032 28.525 29.43 0 61 18 4 0 0 0 0.0064588 1 19950 75.738 34.236 1 49589000 1617 1180 1485 1507 1902 1902 ALELDQERK 9 Unmodified _ALELDQERK_ 0 0 1 P35241 P35241 P35241 RDX Radixin MULTI-MSMS 210214_Eclipse_Hela_QC 551.299255371094 2 551.29857 1100.58259 0.39574 0.00021817 0.59928 0.00033038 0.99501 0.00054855 551.298864234513 21.377 0.39864 21.377 21.21 21.609 0 18 7 4 0 0 0 0.0022129 1 9061 90.37 31.389 1 6952400 1618 1180 1486 1508 1903 1903 ALELDSNLYR 10 Unmodified _ALELDSNLYR_ 0 0 0 P35579 P35579 P35579 MYH9 Myosin-9 MULTI-MSMS 210214_Eclipse_Hela_QC 597.31201171875 2 597.311677 1192.6088 0.8377 0.00050037 0.042396 2.5323E-05 0.88009 0.00052569 597.31161497313 61.318 0.74549 61.318 60.896 61.641 0 39 14 3 0 0 0 6.3676E-05 2 65507 112.84 85.588 1 73287000 1619 1191 1487 1509 1904;1905 1904 ALELEEFQYIGESQGYDIMEPAAK 24 Unmodified _ALELEEFQYIGESQGYDIMEPAAK_ 0 0 0 P43246 P43246 P43246 MSH2 DNA mismatch repair protein Msh2 MULTI-MSMS 210214_Eclipse_Hela_QC 1366.64794921875 2 1366.14401 2730.27346 1.4503 0.0019813 0.52608 0.0007187 1.9764 0.0027 1366.64640058926 106.33 0.199 106.33 106.22 106.42 0 9 3 3 0 0 0 5.2945E-13 1 128409 111.43 105.27 1 17121000 1620 1289 1488 1510 1906 1906 ALELENDR 8 Unmodified _ALELENDR_ 0 0 0 Q03252 Q03252 Q03252 LMNB2 Lamin-B2 MULTI-MSMS 210214_Eclipse_Hela_QC 480.242797851562 2 480.243264 958.471974 -0.081915 -3.9339E-05 -0.3257 -0.00015641 -0.40761 -0.00019575 480.24313220127 27.44 0.39725 27.44 27.254 27.651 0 16 7 3 0 0 0 0.0028346 1 17704 97.093 62.269 1 15887000 1621 1839 1489 1511 1907 1907 ALELEQER 8 Unmodified _ALELEQER_ 0 0 0 P26038 P26038 P26038 MSN Moesin MULTI-MSMS 210214_Eclipse_Hela_QC 494.259033203125 2 494.258914 986.503274 0.2076 0.00010261 0.19034 9.4075E-05 0.39794 0.00019668 494.258964695368 29.057 1.083 29.057 28.695 29.778 0 48 21 3 0 0 0 0.0018462 1 19809 107.66 42.627 1 174350000 1622 1054 1490 1512 1908 1908 ALELEQERK 9 Unmodified _ALELEQERK_ 0 0 1 P26038 P26038 P26038 MSN Moesin MULTI-MSMS 210214_Eclipse_Hela_QC 558.306274414062 2 558.306395 1114.59824 0.27082 0.0001512 0.14405 8.0424E-05 0.41487 0.00023163 558.306468314308 21.411 0.54831 21.411 21.111 21.659 0 30 10 4 0 0 0 4.4077E-06 1 8940 148.52 68.616 1 57938000 1623 1054 1491 1513 1909 1909 ALELNMLSLK 10 Unmodified _ALELNMLSLK_ 0 0 0 Q9Y617 Q9Y617 Q9Y617 PSAT1 Phosphoserine aminotransferase MULTI-MSMS 210214_Eclipse_Hela_QC 566.326843261719 2 566.325742 1130.63693 0.86203 0.00048819 -0.59461 -0.00033674 0.26742 0.00015145 566.325552106803 85.225 1.0933 85.225 84.848 85.941 0 65 21 5 0 0 0 0.00046215 1 98936 87.308 58.159 1 63917000 1624 4133 1492 1514 1910 1910 ALELNMLSLK 10 Oxidation (M) _ALELNM(Oxidation (M))LSLK_ ALELNM(1)LSLK ALELNM(46)LSLK 0 1 0 Q9Y617 Q9Y617 Q9Y617 PSAT1 Phosphoserine aminotransferase MULTI-MSMS 210214_Eclipse_Hela_QC 574.322998046875 2 574.323199 1146.63185 0.91122 0.00052333 -0.47917 -0.0002752 0.43205 0.00024813 574.322926032384 85.279 0.59654 85.279 84.948 85.544 0 22 11 3 0 0 0 0.051407 1 99136 46.158 11.35 1 2965900 1625 4133 1492 1515 1911 1911 530 ALELPLAASSIPR 13 Unmodified _ALELPLAASSIPR_ 0 0 0 Q66K74 Q66K74 Q66K74 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain MULTI-MSMS 210214_Eclipse_Hela_QC 669.393920898438 2 669.393002 1336.77145 1.4282 0.00095604 -0.23346 -0.00015627 1.1948 0.00079977 669.392955065442 84.86 0.54706 84.86 84.599 85.147 0 23 10 3 0 0 0 0.0010067 1 98557 61.958 51.726 1 5160200 1626 2396 1493 1516 1912 1912 ALELPLAASSIPRPR 15 Unmodified _ALELPLAASSIPRPR_ 0 0 1 Q66K74 Q66K74 Q66K74 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain MULTI-MSMS 210214_Eclipse_Hela_QC 531.31689453125 3 530.982385 1589.92533 0.52223 0.0002773 -0.10276 -5.4562E-05 0.41948 0.00022274 531.316479347828 74.082 0.74672 74.082 73.708 74.455 0 32 14 3 0 0 0 0.00051354 2 83718 65.472 53.326 1 5484900 1627 2396 1494 1517 1913;1914 1914 ALELTGLK 8 Unmodified _ALELTGLK_ 0 0 0 P19338 P19338 P19338 NCL Nucleolin MULTI-MSMS 210214_Eclipse_Hela_QC 422.761016845703 2 422.760561 843.506569 0.30746 0.00012998 0.11835 5.0033E-05 0.42581 0.00018002 422.760565516827 49.573 1.3908 49.573 49.187 50.578 0 79 27 6 0 0 0 0.0066415 2 48954 75.109 22.827 1 192490000 1628 964 1495 1518 1915;1916 1915 ALEMAIEAGAEDVK 14 Unmodified _ALEMAIEAGAEDVK_ 0 0 0 Q9BSH4 Q9BSH4 Q9BSH4 TACO1 Translational activator of cytochrome c oxidase 1 MULTI-SECPEP 210214_Eclipse_Hela_QC 723.379455566406 2 723.860874 1445.7072 1.5131 0.0010953 -0.78582 -0.00056883 0.72732 0.00052648 723.860672215241 65.426 0.49817 65.426 65.203 65.702 0 20 9 3 0 0 0 0.0349 1 71498 73.499 62.009 1 3668200 1629 3256 1496 1519 1917 1917 ALEMCPSCFQK 11 Unmodified _ALEMCPSCFQK_ 0 0 0 Q99614 Q99614 Q99614 TTC1 Tetratricopeptide repeat protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 685.799987792969 2 685.798708 1369.58286 1.2162 0.00083407 -0.34626 -0.00023747 0.86994 0.0005966 685.798858850854 50.222 0.59732 50.222 49.931 50.528 0 34 11 4 0 0 0 0.0017814 1 50026 65.347 60.896 1 9861700 1630 3177 1497 1520 1918 1918 ALEMVPLLTSTK 12 Unmodified _ALEMVPLLTSTK_ 0 0 0 P50748 P50748 P50748 KNTC1 Kinetochore-associated protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 652.360412597656 2 651.870514 1301.72647 0.4532 0.00029543 0.29662 0.00019336 0.74981 0.00048878 651.870537607093 84.425 0.54693 84.425 84.152 84.699 0 16 10 2 0 0 0 0.0035412 1 98011 52.79 25.048 1 2821400 1631 1423 1498 1521 1919 1919 ALENPDTASLLGR 13 Unmodified _ALENPDTASLLGR_ 0 0 0 Q9H3S7 Q9H3S7 Q9H3S7 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 MSMS 210214_Eclipse_Hela_QC 678.86181640625 2 678.859523 1355.70449 NaN NaN NaN NaN NaN NaN NaN 61.331 1 61.331 60.831 61.831 0 0 0 0 0.012406 1 65795 54.784 37.271 1 1632 3460 1499 1522 1920 1920 ALENVLSGK 9 Unmodified _ALENVLSGK_ 0 0 0 O43678 O43678 O43678 NDUFA2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 465.766326904297 2 465.766374 929.518196 0.18305 8.526E-05 0.20746 9.663E-05 0.39052 0.00018189 465.766336861678 40.392 0.69596 40.392 40.015 40.711 0 37 13 4 0 0 0 0.008814 1 36094 55.37 13.941 1 17051000 1633 326 1500 1523 1921 1921 ALEPLEGLETMR 12 Unmodified _ALEPLEGLETMR_ 0 0 0 P29372 P29372 P29372 MPG DNA-3-methyladenine glycosylase MULTI-MSMS 210214_Eclipse_Hela_QC 679.853454589844 2 679.852852 1357.69115 0.39607 0.00026927 -0.5488 -0.0003731 -0.15273 -0.00010383 679.852651772333 80.072 0.44793 80.072 79.811 80.259 0 20 8 3 0 0 0 0.0056553 1 91897 51.092 44.789 1 7034100 1634 1101 1501 1524 1922 1922 ALEPTGQSGEAVK 13 Unmodified _ALEPTGQSGEAVK_ 0 0 0 Q8WX92 Q8WX92 Q8WX92 NELFB Negative elongation factor B MSMS 210214_Eclipse_Hela_QC 643.833068847656 2 643.832974 1285.6514 NaN NaN NaN NaN NaN NaN NaN 24.22 1 24.22 23.72 24.72 0 0 0 0 0.0004022 1 13148 112.36 75.962 1 1635 2856 1502 1525 1923 1923 ALEQIDENLIYWPR 14 Unmodified _ALEQIDENLIYWPR_ 0 0 0 Q9BXY0 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 880.454467773438 2 880.454319 1758.89408 1.6895 0.0014876 0.35612 0.00031355 2.0457 0.0018011 880.956126209126 101.14 0.89575 101.14 100.75 101.64 0 39 17 3 0 0 0 0.00014895 1 120947 94.297 83.084 1 7538000 1636 3349 1503 1526 1924 1924 ALEQKPDDAQYYCQR 15 Unmodified _ALEQKPDDAQYYCQR_ 0 0 1 Q9Y2Z0 Q9Y2Z0 Q9Y2Z0 SUGT1 Suppressor of G2 allele of SKP1 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 629.291198730469 3 628.956347 1883.84721 0.43169 0.00027152 0.090211 5.6739E-05 0.5219 0.00032825 628.956400273549 28.313 0.43543 28.313 28.09 28.525 0 23 8 4 0 0 0 2.1484E-10 1 19028 92.265 81.926 1 18794000 1637 4026 1504 1527 1925 1925 ALEQLNGFELAGR 13 Unmodified _ALEQLNGFELAGR_ 0 0 0 Q14498;Q86U06 Q14498 Q14498 RBM39;RBM23 RNA-binding protein 39;Probable RNA-binding protein 23 MULTI-MSMS 210214_Eclipse_Hela_QC 709.877319335938 2 709.37534 1416.73613 0.63072 0.00044742 -0.016439 -1.1662E-05 0.61428 0.00043576 709.375548444031 75.176 0.947 75.176 74.754 75.701 0 73 18 6 0 0 0 2.0891E-09 1 85027 132.44 92.084 1 38279000 1638 2087 1505 1528 1926 1926 ALEQLNGFELAGRPMK 16 Unmodified _ALEQLNGFELAGRPMK_ 0 0 1 Q14498 Q14498 Q14498 RBM39 RNA-binding protein 39 MULTI-MSMS 210214_Eclipse_Hela_QC 591.981628417969 3 591.982056 1772.92434 0.57085 0.00033793 -0.29195 -0.00017283 0.27889 0.0001651 591.982608157146 67.469 0.96269 67.469 66.946 67.909 0 51 19 4 0 0 0 0.00078554 1 74495 43.297 33.882 1 16576000 1639 2087 1506 1529 1927 1927 ALEQQVEEMK 10 Unmodified _ALEQQVEEMK_ 0 0 0 P35579 P35579 P35579 MYH9 Myosin-9 MULTI-MSMS 210214_Eclipse_Hela_QC 602.798889160156 2 602.797546 1203.58054 0.20586 0.00012409 1.0844 0.00065369 1.2903 0.00077778 602.798517229192 38.492 0.94083 38.492 37.894 38.835 0 29 18 2 0 0 0 2.6183E-08 1 33346 149.65 118.28 1 32992000 1640 1191 1507 1530 1928 1928 ALESDMAPVLIMATNR 16 Unmodified _ALESDMAPVLIMATNR_ 0 0 0 Q9Y230 Q9Y230 Q9Y230 RUVBL2 RuvB-like 2 MULTI-MSMS 210214_Eclipse_Hela_QC 866.945556640625 2 866.44204 1730.86953 1.5685 0.001359 -0.56894 -0.00049295 0.9996 0.00086609 866.441911020383 96.743 0.79575 96.743 96.372 97.168 0 65 15 6 0 0 0 3.1826E-17 1 114889 180.18 151.47 1 40295000 1641 3984 1508 1531 1929 1929 ALESGDVNTVWK 12 Unmodified _ALESGDVNTVWK_ 0 0 0 P46940 P46940 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 210214_Eclipse_Hela_QC 659.836669921875 2 659.835517 1317.65648 0.97695 0.00064463 -0.098729 -6.5145E-05 0.87822 0.00057948 659.835450002529 53.764 0.94614 53.764 53.192 54.138 0 54 18 5 0 0 0 2.9781E-11 2 54952 134.59 104.02 1 56307000 1642 1322 1509 1532 1930;1931 1930 ALESLMTEFFHDCTTNER 18 Unmodified _ALESLMTEFFHDCTTNER_ 0 0 0 Q96QU8 Q96QU8 Q96QU8 XPO6 Exportin-6 MULTI-MSMS 210214_Eclipse_Hela_QC 734.660217285156 3 734.326111 2199.9565 1.3166 0.0009668 -0.27856 -0.00020455 1.038 0.00076225 734.660439682723 96.821 0.44781 96.821 96.571 97.019 0 21 8 3 0 0 0 0.042519 1 115203 20.091 16.371 1 1657600 1643 3121 1510 1533 1932 1932 ALESPERPFLAILGGAK 17 Unmodified _ALESPERPFLAILGGAK_ 0 0 1 P00558 P00558 P00558 PGK1 Phosphoglycerate kinase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 590.670776367188 3 590.336716 1767.98832 0.58452 0.00034506 -0.38642 -0.00022812 0.1981 0.00011694 590.336967442702 86.659 1.9889 86.659 86.14 88.129 0 150 39 7 0 0 0 9.2048E-18 2 101532 143.28 104.8 1 685120000 1644 630 1511 1534 1933;1934 1934 ALESPERPFLAILGGAK 17 Unmodified _ALESPERPFLAILGGAK_ 0 0 1 P00558 P00558 P00558 PGK1 Phosphoglycerate kinase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 885.504760742188 2 885.001436 1767.98832 1.1349 0.0010044 -0.70719 -0.00062587 0.42771 0.00037853 885.001338725694 86.662 1.0437 86.662 86.24 87.284 0 77 20 5 0 0 0 0.00049406 1 100805 113.77 96.825 1 22516000 1645 630 1511 1534 1935 1935 ALESSIAPIVIFASNR 16 Unmodified _ALESSIAPIVIFASNR_ 0 0 0 Q9Y265 Q9Y265 Q9Y265 RUVBL1 RuvB-like 1 MULTI-MSMS 210214_Eclipse_Hela_QC 844.473937988281 2 844.472512 1686.93047 1.307 0.0011037 -0.72987 -0.00061636 0.57714 0.00048738 844.471327103477 103.89 1.1939 103.89 103.48 104.68 0 73 23 5 0 0 0 1.8522E-16 1 124798 144.47 119.04 1 46036000 1646 3991 1512 1535 1936 1936 ALESSLWELQALQR 14 Unmodified _ALESSLWELQALQR_ 0 0 0 Q9BVI4 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 822.440490722656 2 822.441212 1642.86787 1.8714 0.0015391 -1.2092 -0.0009945 0.66219 0.00054461 822.439067521898 95.492 0.79196 95.492 95.025 95.816 0 38 15 4 0 0 0 0.020141 1 113434 36.417 4.4086 1 5625900 1647 3311 1513 1536 1937 1937 ALETDSVSGVSK 12 Unmodified _ALETDSVSGVSK_ 0 0 0 Q15022 Q15022 Q15022 SUZ12 Polycomb protein SUZ12 MSMS 210214_Eclipse_Hela_QC 596.807067871094 2 596.806425 1191.5983 NaN NaN NaN NaN NaN NaN NaN 28.509 1 28.509 28.009 29.009 0 0 0 0 0.0076167 1 19302 61.161 32.012 1 1648 2135 1514 1537 1938 1938 ALETLTGALFQRPPLIAAVK 20 Unmodified _ALETLTGALFQRPPLIAAVK_ 0 0 1 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 210214_Eclipse_Hela_QC 704.087341308594 3 703.75253 2108.23576 2.0043 0.0014106 -0.11348 -7.9864E-05 1.8909 0.0013307 704.086817396979 101.56 0.89497 101.56 101.15 102.04 0 72 17 5 0 0 0 1.6732E-06 1 121494 89.261 85.31 1 22692000 1649 400 1515 1538 1939 1939 ALEVAEYLTPVLK 13 Unmodified _ALEVAEYLTPVLK_ 0 0 0 Q9NT62 Q9NT62 Q9NT62 ATG3 Ubiquitin-like-conjugating enzyme ATG3 MULTI-MSMS 210214_Eclipse_Hela_QC 724.079528808594 2 723.416143 1444.81773 1.2884 0.00093206 -0.0067025 -4.8487E-06 1.2817 0.00092721 723.416181225634 98.822 0.59724 98.822 98.362 98.959 0 38 11 5 0 0 0 1.8043E-08 1 117805 119.16 107.99 1 13482000 1650 3646 1516 1539 1940 1940 ALEVFPEFAAAHSNLASVLQQQGK 24 Unmodified _ALEVFPEFAAAHSNLASVLQQQGK_ 0 0 0 O15294 O15294 O15294 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit MULTI-MSMS 210214_Eclipse_Hela_QC 852.781860351562 3 852.446605 2554.31799 2.0915 0.0017828 0.5007 0.00042682 2.5922 0.0022097 852.781247464398 100.34 0.64548 100.34 99.954 100.6 0 44 12 5 0 0 0 0.000162 1 120054 51.526 43.44 1 6058500 1651 259 1517 1540 1941 1941 ALEVYDLIR 9 Unmodified _ALEVYDLIR_ 0 0 0 Q9H5X1 Q9H5X1 Q9H5X1 FAM96A MIP18 family protein FAM96A MULTI-MSMS 210214_Eclipse_Hela_QC 546.309143066406 2 546.308406 1090.60226 0.57041 0.00031162 -2.6918 -0.0014705 -2.1213 -0.0011589 546.306699762791 82.645 0.71037 82.645 82.395 83.106 0 25 15 2 0 0 0 0.0030327 1 95531 71.501 25.075 1 5243900 1652 3479 1518 1541 1942 1942 ALEYTIYNQELNETR 15 Unmodified _ALEYTIYNQELNETR_ 0 0 0 Q9UQE7 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 929.462219238281 2 928.95488 1855.89521 1.1273 0.0010472 -0.053774 -4.9954E-05 1.0735 0.00099725 929.456235193913 69.518 0.69718 69.518 69.128 69.825 0 41 13 4 0 0 0 8.1338E-11 1 77089 152.85 141.64 1 17639000 1653 3980 1519 1542 1943 1943 ALEYVEAK 8 Unmodified _ALEYVEAK_ 0 0 0 Q14690 Q14690 Q14690 PDCD11 Protein RRP5 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 461.747650146484 2 461.74765 921.480748 0.20233 9.3423E-05 1.3089 0.00060438 1.5112 0.0006978 461.747614174947 29.663 0.69599 29.663 29.38 30.076 0 33 13 4 0 0 0 0.0068895 1 21002 74.255 46.55 1 10730000 1654 2102 1520 1543 1944 1944 ALFAGDIEEMEER 13 Unmodified _ALFAGDIEEMEER_ 0 0 0 Q9BQ52 Q9BQ52 Q9BQ52 ELAC2 Zinc phosphodiesterase ELAC protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 755.850952148438 2 755.348131 1508.68171 1.5588 0.0011775 0.19379 0.00014638 1.7526 0.0013238 755.348208412453 77.51 0.69626 77.51 77.125 77.821 0 31 13 3 0 0 0 0.00019756 1 88223 96.015 85.728 1 6357700 1655 3217 1521 1544 1945 1945 ALFAISCLVR 10 Unmodified _ALFAISCLVR_ 0 0 0 Q9NZL4 Q9NZL4 Q9NZL4 HSPBP1 Hsp70-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 575.327209472656 2 575.326076 1148.6376 1.132 0.00065125 -0.11239 -6.4659E-05 1.0196 0.00058659 575.325974838438 89.288 0.54717 89.288 88.914 89.461 0 18 10 2 0 0 0 0.0016465 1 104590 71.501 50.201 1 4219500 1656 3766 1522 1545 1946 1946 ALFDFNGNDEEDLPFK 16 Unmodified _ALFDFNGNDEEDLPFK_ 0 0 0 P46108 P46108 P46108 CRK Adapter molecule crk MULTI-MSMS 210214_Eclipse_Hela_QC 936.430969238281 2 935.928331 1869.84211 1.5081 0.0014114 0.34235 0.00032042 1.8504 0.0017319 935.928492148677 104.95 0.44948 104.95 104.73 105.18 0 30 8 5 0 0 0 5.6036E-11 1 126344 121.08 114.84 1 22438000 1657 1305 1523 1546 1947 1947 ALFEEVPELLTEAEK 15 Unmodified _ALFEEVPELLTEAEK_ 0 0 0 P31939 P31939 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase MULTI-MSMS 210214_Eclipse_Hela_QC 859.950012207031 2 859.448368 1716.88218 0.7125 0.00061236 -0.34676 -0.00029802 0.36575 0.00031434 859.949437313157 106.15 0.5477 106.15 106.02 106.57 0 31 10 5 0 0 0 6.2583E-23 2 128093 164.04 152.17 1 215460000 1658 1148 1524 1547 1948;1949 1949 ALFPGDSEIDQLFR 14 Unmodified _ALFPGDSEIDQLFR_ 0 0 0 P24941;Q00526 P24941 P24941 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 MSMS 210214_Eclipse_Hela_QC 804.40771484375 2 804.406837 1606.79912 NaN NaN NaN NaN NaN NaN NaN 106.52 1 106.52 106.02 107.02 0 0 0 0 1.7734E-06 1 128595 129.89 95.928 1 1659 1039 1525 1548 1950 1950 ALGAEIVR 8 Unmodified _ALGAEIVR_ 0 0 0 P0DN79;P35520 P0DN79 P0DN79 CBS Cystathionine beta-synthase MULTI-MSMS 210214_Eclipse_Hela_QC 414.750274658203 2 414.750527 827.486502 0.19728 8.1822E-05 -0.24218 -0.00010045 -0.044905 -1.8624E-05 414.750385132793 34.353 0.69486 34.353 33.966 34.661 0 29 14 3 0 0 0 0.003303 1 27556 89.55 44.1 1 12029000 1660 794 1526 1549 1951 1951 ALGALAAALR 10 Unmodified _ALGALAAALR_ 0 0 0 Q9Y6K5 Q9Y6K5 Q9Y6K5 OAS3 2-5-oligoadenylate synthase 3 MULTI-MSMS 210214_Eclipse_Hela_QC 463.793029785156 2 463.792727 925.5709 0.3681 0.00017072 -0.30642 -0.00014211 0.061684 2.8608E-05 463.792518124212 62.9 0.64622 62.9 62.578 63.224 0 28 12 3 0 0 0 0.0017119 1 67889 70.69 42.583 1 4367200 1661 4158 1527 1550 1952 1952 ALGALVDSCAPGLCPDWDSWDASK 24 Unmodified _ALGALVDSCAPGLCPDWDSWDASK_ 0 0 0 P21333 P21333 P21333 FLNA Filamin-A MULTI-MSMS 210214_Eclipse_Hela_QC 1296.58361816406 2 1296.08069 2590.14682 1.8085 0.002344 -0.30423 -0.00039431 1.5043 0.0019496 1296.58219012658 105.67 0.49849 105.67 105.53 106.02 0 33 9 6 0 0 0 1.8317E-32 2 127472 153.94 149.7 1 135580000 1662 995 1528 1551 1953;1954 1954 ALGALVDSCAPGLCPDWESWDPQK 24 Unmodified _ALGALVDSCAPGLCPDWESWDPQK_ 0 0 0 O75369 O75369 O75369 FLNB Filamin-B MULTI-MSMS 210214_Eclipse_Hela_QC 1336.12487792969 2 1336.60961 2671.20467 1.8524 0.0024759 0.05081 6.7913E-05 1.9032 0.0025439 1337.11141928058 105.85 0.39877 105.85 105.67 106.07 0 34 7 6 0 0 0 4.1314E-24 2 127659 136.81 132.5 1 88858000 1663 445 1529 1552 1955;1956 1955 ALGDLISATK 10 Unmodified _ALGDLISATK_ 0 0 0 Q9Y490 Q9Y490 Q9Y490 TLN1 Talin-1 MSMS 210214_Eclipse_Hela_QC 494.787414550781 2 494.787307 987.560061 NaN NaN NaN NaN NaN NaN NaN 57.699 1 57.699 57.199 58.199 0 0 0 0 0.0075532 1 60688 72.643 35.484 1 1664 4084 1530 1553 1957 1957 ALGEPITLFGEGPAER 16 Unmodified _ALGEPITLFGEGPAER_ 0 0 0 O43172 O43172 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 MULTI-MSMS 210214_Eclipse_Hela_QC 828.933837890625 2 828.933219 1655.85189 1.2934 0.0010721 0.61732 0.00051172 1.9107 0.0015839 828.933838910699 87.06 0.99444 87.06 86.588 87.582 0 44 19 3 0 0 0 0.0043162 1 101337 46.063 31.372 1 16814000 1665 287 1531 1554 1958 1958 ALGEYLER 8 Unmodified _ALGEYLER_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 210214_Eclipse_Hela_QC 475.750885009766 2 475.750724 949.486896 0.10871 5.1719E-05 0.12874 6.1246E-05 0.23745 0.00011297 475.750849372045 42.622 0.79638 42.622 42.249 43.045 0 26 15 2 0 0 0 0.056349 1 39261 39.324 25.605 1 25915000 1666 2070 1532 1555 1959 1959 ALGFPLER 8 Unmodified _ALGFPLER_ 0 0 0 O75390 O75390 O75390 CS Citrate synthase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 451.753082275391 2 451.758352 901.502152 0.6097 0.00027544 0.10094 4.5601E-05 0.71064 0.00032104 451.758342618323 61.104 0.894 61.104 60.647 61.541 0 34 17 3 0 0 0 0.0087299 2 65193 68.915 27.413 1 6938800 1667 449 1533 1556 1960;1961 1960 ALGFPLERPK 10 Unmodified _ALGFPLERPK_ 0 0 1 O75390 O75390 O75390 CS Citrate synthase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 376.891540527344 3 376.557236 1126.64988 -0.46887 -0.00017656 0.47216 0.0001778 0.0032918 1.2396E-06 376.557384512446 46.778 0.8456 46.778 46.379 47.224 0 48 16 4 0 0 0 0.00011719 2 45068 89.886 76.116 1 32476000 1668 449 1534 1557 1962;1963 1963 ALGFVSDR 8 Unmodified _ALGFVSDR_ 0 0 0 P30876 P30876 P30876 POLR2B DNA-directed RNA polymerase II subunit RPB2 MULTI-MSMS 210214_Eclipse_Hela_QC 432.731842041016 2 432.732335 863.450116 -0.066776 -2.8896E-05 -0.37445 -0.00016204 -0.44122 -0.00019093 432.732284552467 38.121 1.1406 38.121 37.35 38.491 0 66 22 4 0 0 0 0.015848 1 32803 58.286 1.1835 1 26321000 1669 1137 1535 1558 1964 1964 ALGGDVSDQSLESHSQK 17 Unmodified _ALGGDVSDQSLESHSQK_ 0 0 0 Q9UKJ3 Q9UKJ3 Q9UKJ3 GPATCH8 G patch domain-containing protein 8 MULTI-MSMS 210214_Eclipse_Hela_QC 586.949401855469 3 586.614867 1756.82277 0.4543 0.0002665 -0.10455 -6.1333E-05 0.34975 0.00020517 586.614862180565 28.057 0.39301 28.057 27.796 28.189 0 14 7 3 0 0 0 0.049454 1 18659 18.76 12.031 1 3452800 1670 3909 1536 1559 1965 1965 ALGGEDVR 8 Unmodified _ALGGEDVR_ 0 0 0 CON__P12763 CON__P12763 CON__P12763 MULTI-MSMS 210214_Eclipse_Hela_QC 408.714660644531 2 408.714142 815.413731 -0.13533 -5.531E-05 0.86958 0.00035541 0.73425 0.0003001 408.714619346127 20.489 0.7468 20.489 20.314 21.061 0 36 14 4 0 0 0 0.0073153 1 7730 72.789 26.126 1 74437000 + 1671 62 1537 1560 1966 1966 ALGHQLGR 8 Unmodified _ALGHQLGR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 210214_Eclipse_Hela_QC 426.246398925781 2 426.245944 850.477334 1.1351 0.00048381 0.27507 0.00011725 1.4101 0.00060106 426.245911528685 16.369 0.81125 16.369 16.191 17.002 0 103 66 2 0 0 0 0.0035181 1 2975 86.086 41.476 1 4553700 1672 2070 1538 1561 1967 1967 ALGLFSNDIPHVVR 14 Unmodified _ALGLFSNDIPHVVR_ 0 0 0 Q8NI36 Q8NI36 Q8NI36 WDR36 WD repeat-containing protein 36 MULTI-MSMS 210214_Eclipse_Hela_QC 513.622314453125 3 513.287697 1536.84126 0.605 0.00031054 -0.64782 -0.00033252 -0.042818 -2.1978E-05 513.287507852347 76.306 0.64704 76.306 75.98 76.627 0 33 12 4 0 0 0 0.0077818 1 86636 36.938 36.938 1 4694500 1673 2782 1539 1562 1968 1968 ALGLGVEQLPVVFEDVVLHQATILPK 26 Unmodified _ALGLGVEQLPVVFEDVVLHQATILPK_ 0 0 0 P49327 P49327 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 210214_Eclipse_Hela_QC 929.536987304688 3 929.200261 2784.57895 1.2792 0.0011886 0.70051 0.00065091 1.9797 0.0018395 929.534946331143 109.68 0.29939 109.68 109.55 109.85 0 16 5 5 0 0 0 0.00049202 1 132969 40.756 39.772 1 12593000 1674 1365 1540 1563 1969 1969 ALGLSTDDAYEELR 14 Unmodified _ALGLSTDDAYEELR_ 0 0 0 Q9UK61 Q9UK61 Q9UK61 FAM208A Protein FAM208A MULTI-MSMS 210214_Eclipse_Hela_QC 777.380493164062 2 776.87811 1551.74167 1.7888 0.0013897 -0.54671 -0.00042473 1.2421 0.00096494 776.877560306132 72.9 0.44813 72.9 72.662 73.11 0 18 8 3 0 0 0 0.00010748 2 81950 83 64.688 1 3167800 1675 3904 1541 1564 1970;1971 1970 ALGNNFYEYYVDDPPR 16 Unmodified _ALGNNFYEYYVDDPPR_ 0 0 0 P30047 P30047 P30047 GCHFR GTP cyclohydrolase 1 feedback regulatory protein MULTI-MSMS 210214_Eclipse_Hela_QC 967.506408691406 2 966.941773 1931.86899 0.71159 0.00068807 -0.14349 -0.00013875 0.5681 0.00054932 967.442944367723 82.209 0.67228 82.209 81.848 82.521 0 52 13 5 0 0 0 2.2792E-11 3 95013 128.85 114.61 1 32122000 1676 1113 1542 1565 1972;1973;1974 1973 ALGPEQLLR 9 Unmodified _ALGPEQLLR_ 0 0 0 P36915 P36915 P36915 GNL1 Guanine nucleotide-binding protein-like 1 MULTI-MSMS 210214_Eclipse_Hela_QC 498.795959472656 2 498.795466 995.57638 0.37022 0.00018467 0.10022 4.9989E-05 0.47044 0.00023465 498.79550853638 58.559 0.59735 58.559 58.209 58.806 0 28 11 3 0 0 0 0.004989 1 61761 65.313 29.875 1 3694800 1677 1213 1543 1566 1975 1975 ALGQAASDNSGPEDAK 16 Unmodified _ALGQAASDNSGPEDAK_ 0 0 0 Q15155 Q15155 Q15155 NOMO1 Nodal modulator 1 MULTI-MSMS 210214_Eclipse_Hela_QC 765.855895996094 2 765.855166 1529.69578 0.73318 0.00056151 0.24954 0.00019111 0.98272 0.00075262 765.855307883404 21.036 0.44832 21.036 20.862 21.31 0 16 8 3 0 0 0 0.0003048 1 8666 66.262 59.134 1 6367000 1678 2160 1544 1567 1976 1976 ALGQNPTNAEVLK 13 Unmodified _ALGQNPTNAEVLK_ 0 0 0 P60660;P14649 P60660;P14649 P60660 MYL6;MYL6B Myosin light polypeptide 6;Myosin light chain 6B MULTI-MSMS 210214_Eclipse_Hela_QC 678.372741699219 2 677.869891 1353.72523 0.31832 0.00021578 -0.25616 -0.00017364 0.062157 4.2134E-05 677.869652931916 39.3 1.08 39.3 38.935 40.015 0 68 22 4 0 0 0 3.4155E-13 2 34355 143.5 120.97 1 209260000 1679 1581;885 1545 1568 1977;1978 1977 ALGSDHCPITLYLAL 15 Unmodified _ALGSDHCPITLYLAL_ 0 0 0 P27695 P27695 P27695 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 822.426879882812 2 822.426716 1642.83888 0.64151 0.00052759 -0.36187 -0.00029761 0.27964 0.00022998 822.426672057121 105.96 0.29902 105.96 105.82 106.12 0 13 5 4 0 0 0 0.0072701 1 127905 43.308 36.924 1 17758000 1680 1075 1546 1569 1979 1979 ALGSEVQDASK 11 Unmodified _ALGSEVQDASK_ 0 0 0 Q9H2G2 Q9H2G2 Q9H2G2 SLK STE20-like serine/threonine-protein kinase MULTI-MSMS 210214_Eclipse_Hela_QC 552.780090332031 2 552.78021 1103.54587 0.54892 0.00030343 0.44935 0.00024839 0.99826 0.00055182 552.780318829739 23.198 0.44875 23.198 23.002 23.451 0 19 8 3 0 0 0 0.00025071 1 11699 89.047 69.953 1 5705000 1681 3438 1547 1570 1980 1980 ALGTAADLGTLAPR 14 Unmodified _ALGTAADLGTLAPR_ 0 0 0 Q96B70 Q96B70 Q96B70 LENG9 Leukocyte receptor cluster member 9 MULTI-MSMS 210214_Eclipse_Hela_QC 663.871520996094 2 663.872434 1325.73031 0.47516 0.00031544 -0.10192 -6.766E-05 0.37324 0.00024778 663.872161417828 65.826 0.44786 65.826 65.652 66.1 0 13 8 2 0 0 0 0.0010097 1 72287 57.019 39.155 1 1627900 1682 2971 1548 1571 1981 1981 ALGTEVIQLFPEK 13 Unmodified _ALGTEVIQLFPEK_ 0 0 0 O95831 O95831 O95831 AIFM1 Apoptosis-inducing factor 1, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 722.907165527344 2 722.905942 1443.79733 1.5379 0.0011117 0.48277 0.000349 2.0206 0.0014607 722.906304393367 91.776 0.89461 91.776 91.3 92.195 0 70 17 5 0 0 0 1.899E-08 1 108077 140.07 107.75 1 44734000 1683 601 1549 1572 1982 1982 ALGTLGMTTNEK 12 Unmodified _ALGTLGMTTNEK_ 0 0 0 Q5T4S7 Q5T4S7 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 MULTI-MSMS 210214_Eclipse_Hela_QC 618.318908691406 2 618.318645 1234.62274 0.21206 0.00013112 0.54759 0.00033858 0.75965 0.0004697 618.318991970139 40.402 0.64687 40.402 40.164 40.81 0 25 12 3 0 0 0 6.7092E-06 1 36309 112.75 80.814 1 7347000 1684 2358 1550 1573 1983 1983 ALGTPNNEVWPEVESLQDYK 20 Unmodified _ALGTPNNEVWPEVESLQDYK_ 0 0 0 P06493 P06493 P06493 CDK1 Cyclin-dependent kinase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1145.56066894531 2 1145.05532 2288.09609 1.6684 0.0019104 0.31733 0.00036336 1.9857 0.0022737 1145.55691781596 93.813 1.0439 93.813 93.24 94.284 0 82 20 5 0 0 0 2.755E-05 1 110831 69.716 54.685 1 18001000 1685 698 1551 1574 1984 1984 ALGVTALFDK 10 Unmodified _ALGVTALFDK_ 0 0 0 CON__ENSEMBL:ENSBTAP00000018574 CON__ENSEMBL:ENSBTAP00000018574 CON__ENSEMBL:ENSBTAP00000018574 MULTI-MSMS 210214_Eclipse_Hela_QC 517.797058105469 2 517.797675 1033.5808 0.05973 3.0928E-05 0.20731 0.00010735 0.26704 0.00013827 517.797716997879 75.028 1.0967 75.028 74.604 75.701 0 54 21 4 0 0 0 8.4784E-06 1 84757 124.23 83.879 1 63995000 + 1686 36 1552 1575 1985 1985 ALGVTEDR 8 Unmodified _ALGVTEDR_ 0 0 0 O95202 O95202 O95202 LETM1 LETM1 and EF-hand domain-containing protein 1, mitochondrial MSMS 210214_Eclipse_Hela_QC 430.727264404297 2 430.727249 859.439946 NaN NaN NaN NaN NaN NaN NaN 22.656 1 22.656 22.156 23.156 0 0 0 0 0.04323 1 10909 58.286 23.462 1 1687 544 1553 1576 1986 1986 ALGYFAVVTGK 11 Unmodified _ALGYFAVVTGK_ 0 0 0 O60313 O60313 O60313 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 MSMS 210214_Eclipse_Hela_QC 563.319458007812 2 563.318774 1124.623 NaN NaN NaN NaN NaN NaN NaN 71.262 1 71.262 70.762 71.762 0 0 0 0 0.011442 1 79700 60.518 25.223 1 1688 361 1554 1577 1987 1987 ALHFVFK 7 Unmodified _ALHFVFK_ 0 0 0 Q9HC38 Q9HC38 Q9HC38 GLOD4 Glyoxalase domain-containing protein 4 MULTI-MSMS 210214_Eclipse_Hela_QC 431.252777099609 2 431.252706 860.490859 0.18837 8.1233E-05 -0.010093 -4.3524E-06 0.17827 7.6881E-05 431.252638042467 41.929 0.99138 41.929 41.506 42.497 0 40 19 3 0 0 0 0.020618 1 38692 64.276 43.577 1 12909000 1689 3554 1555 1578 1988 1988 ALHGEATNSMASDNQPEGMISESLDNLESMMPNK 34 Unmodified _ALHGEATNSMASDNQPEGMISESLDNLESMMPNK_ 0 0 0 P55265 P55265 P55265 ADAR Double-stranded RNA-specific adenosine deaminase MULTI-SECPEP 210214_Eclipse_Hela_QC 1217.07604980469 3 1216.86888 3647.5848 0.89006 0.0010831 0.69153 0.0008415 1.5816 0.0019246 1217.20345527642 105.56 0.49854 105.56 105.38 105.87 0 43 9 6 0 0 0 0.0076242 1 127345 37.944 34.738 1 24824000 1690 1540 1556 1579 1989 1989 ALHLGNNVLQSLPSR 15 Unmodified _ALHLGNNVLQSLPSR_ 0 0 0 Q8IWT6 Q8IWT6 Q8IWT6 LRRC8A Volume-regulated anion channel subunit LRRC8A MULTI-MSMS 210214_Eclipse_Hela_QC 540.640319824219 3 540.305639 1617.89509 0.63137 0.00034113 -0.11393 -6.1555E-05 0.51745 0.00027958 540.305469022243 62.514 0.44311 62.514 62.334 62.777 0 20 8 3 0 0 0 0.0042243 1 67477 40.278 28.664 1 3857100 1691 2628 1557 1580 1990 1990 ALHLLEEYR 9 Unmodified _ALHLLEEYR_ 0 0 0 Q12959 Q12959 Q12959 DLG1 Disks large homolog 1 MULTI-MSMS 210214_Eclipse_Hela_QC 381.877044677734 3 381.876746 1142.60841 0.4171 0.00015928 0.38242 0.00014604 0.79951 0.00030532 382.21138141818 46.155 0.59713 46.155 45.981 46.578 0 18 11 2 0 0 0 0.010167 1 44478 40.352 15.498 1 3246500 1692 1927 1558 1581 1991 1991 ALHNLAQQAPEFSATQVFPR 20 Unmodified _ALHNLAQQAPEFSATQVFPR_ 0 0 0 Q9BTW9 Q9BTW9 Q9BTW9 TBCD Tubulin-specific chaperone D MULTI-MSMS 210214_Eclipse_Hela_QC 742.389587402344 3 742.38691 2224.1389 1.5444 0.0011465 0.11925 8.8529E-05 1.6636 0.001235 742.721374417676 73.053 0.6478 73.053 72.712 73.36 0 37 12 5 0 0 0 8.2809E-06 1 82051 63.578 59.14 1 10563000 1693 3279 1559 1582 1992 1992 ALHSVLQAVPLNELR 15 Unmodified _ALHSVLQAVPLNELR_ 0 0 0 Q16401 Q16401 Q16401 PSMD5 26S proteasome non-ATPase regulatory subunit 5 MULTI-MSMS 210214_Eclipse_Hela_QC 553.990173339844 3 553.98954 1658.94679 0.30722 0.0001702 0.32134 0.00017802 0.62856 0.00034822 554.32405756039 73.932 1.0455 73.932 73.559 74.604 0 59 20 5 0 0 0 5.1381E-16 1 83238 119.87 107.89 1 29225000 1694 2227 1560 1583 1993 1993 ALIAAQLDNAIEK 13 Unmodified _ALIAAQLDNAIEK_ 0 0 0 Q9BXY0 Q9BXY0 Q9BXY0 MAK16 Protein MAK16 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 685.388122558594 2 685.387916 1368.76128 0.18203 0.00012476 -0.040169 -2.7531E-05 0.14186 9.723E-05 685.387930556327 68.897 0.62361 68.897 68.554 69.178 0 26 12 3 0 0 0 5.4221E-06 3 76302 129.16 89.851 1 8243000 1695 3349 1561 1584 1994;1995;1996 1994 ALIAAQYSGAQVR 13 Unmodified _ALIAAQYSGAQVR_ 0 0 0 P26641 P26641 P26641 EEF1G Elongation factor 1-gamma MULTI-MSMS 210214_Eclipse_Hela_QC 674.373901367188 2 674.372601 1346.73065 1.205 0.00081263 -0.14128 -9.5273E-05 1.0637 0.00071736 674.372492056667 47.447 1.194 47.447 47.026 48.22 0 74 23 5 0 0 0 1.0318E-29 2 45969 192.26 111.82 1 221660000 1696 1065 1562 1585 1997;1998 1997 ALIADSGLK 9 Unmodified _ALIADSGLK_ 0 0 0 Q9P2R7 Q9P2R7 Q9P2R7 SUCLA2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 444.263824462891 2 444.263468 886.512382 -0.070189 -3.1182E-05 -0.15397 -6.8401E-05 -0.22415 -9.9584E-05 444.263494229699 37.862 1.2314 37.862 37.26 38.491 0 47 24 3 0 0 0 0.0015451 1 32527 81.296 30.33 1 11584000 1697 3807 1563 1586 1999 1999 ALIAGGGAPEIELALR 16 Unmodified _ALIAGGGAPEIELALR_ 0 0 0 P50991 P50991 P50991 CCT4 T-complex protein 1 subunit delta MULTI-MSMS 210214_Eclipse_Hela_QC 775.9482421875 2 775.948672 1549.88279 1.5925 0.0012357 0.27376 0.00021242 1.8662 0.0014481 775.948882263527 92.021 0.69636 92.021 91.648 92.345 0 38 13 3 0 0 0 3.9231E-05 1 108252 98.353 86.488 1 121230000 1698 1429 1564 1587 2000 2000 ALIAQLPSPAIDHEQLR 17 Unmodified _ALIAQLPSPAIDHEQLR_ 0 0 0 Q9UPN3 Q9UPN3 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 MULTI-SECPEP 210214_Eclipse_Hela_QC 624.304870605469 3 624.682775 1871.0265 0.74954 0.00046823 -0.0088546 -5.5313E-06 0.74069 0.00046269 624.682812891173 71.295 0.54865 71.295 71.118 71.667 0 16 10 2 0 0 0 0.057293 1 79843 46.319 34.55 1 3554500 1699 3969 1565 1588 2001 2001 ALIDPSSGLPNR 12 Unmodified _ALIDPSSGLPNR_ 0 0 0 Q92530 Q92530 Q92530 PSMF1 Proteasome inhibitor PI31 subunit MULTI-MSMS 210214_Eclipse_Hela_QC 620.339050292969 2 620.338227 1238.6619 0.70648 0.00043826 -0.034248 -2.1246E-05 0.67223 0.00041701 620.338056955544 56.175 0.94659 56.175 55.869 56.815 0 33 18 3 0 0 0 0.030022 1 58372 36.318 19.844 1 5254800 1700 2878 1566 1589 2002 2002 ALIDQEVK 8 Unmodified _ALIDQEVK_ 0 0 0 O75608 O75608 O75608 LYPLA1 Acyl-protein thioesterase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 458.260681152344 2 458.260925 914.507297 0.42279 0.00019375 -0.025314 -1.16E-05 0.39748 0.00018215 458.260859637358 31.925 0.59219 31.925 31.619 32.211 0 29 11 3 0 0 0 0.004896 1 24038 81.119 26.548 1 26948000 1701 470 1567 1590 2003 2003 ALIDSVIPK 9 Unmodified _ALIDSVIPK_ 0 0 0 P29466;Q5EG05 P29466 P29466 CASP1;CARD16 Caspase-1;Caspase-1 subunit p20;Caspase-1 subunit p10;Caspase recruitment domain-containing protein 16 MULTI-MSMS 210214_Eclipse_Hela_QC 478.294403076172 2 478.294768 954.574983 0.45693 0.00021855 0.047377 2.266E-05 0.50431 0.00024121 478.294704504032 69.394 0.74699 69.394 69.029 69.776 0 39 14 4 0 0 0 0.023717 1 76881 47.082 19.945 1 12750000 1702 1103 1568 1591 2004 2004 ALIDYENSNK 10 Unmodified _ALIDYENSNK_ 0 0 0 Q9Y5X3 Q9Y5X3 Q9Y5X3 SNX5 Sorting nexin-5 MULTI-MSMS 210214_Eclipse_Hela_QC 584.289855957031 2 583.788035 1165.56152 0.021772 1.271E-05 0.62088 0.00036246 0.64265 0.00037517 584.290024849336 36.073 0.78136 36.073 35.64 36.421 0 24 15 2 0 0 0 0.016677 1 30059 47.96 29.635 1 12010000 1703 4128 1569 1592 2005 2005 ALIEHEMK 8 Unmodified _ALIEHEMK_ 0 0 0 O95372 O95372 O95372 LYPLA2 Acyl-protein thioesterase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 485.754516601562 2 485.754953 969.495352 0.43349 0.00021057 0.11776 5.72E-05 0.55125 0.00026777 485.754882226682 21.638 0.39843 21.638 21.46 21.858 0 17 7 3 0 0 0 0.0027499 1 9447 98.458 31.465 1 16416000 1704 563 1570 1593 2006 2006 ALIEILATR 9 Unmodified _ALIEILATR_ 0 0 0 P08133 P08133 P08133 ANXA6 Annexin A6 MULTI-MSMS 210214_Eclipse_Hela_QC 500.313415527344 2 500.313492 998.612431 0.70092 0.00035068 0.12864 6.4359E-05 0.82956 0.00041504 500.313527486723 75.527 0.59766 75.527 75.153 75.751 0 21 11 3 0 0 0 0.0027656 1 85576 73.26 8.0079 1 3374100 1705 739 1571 1594 2007 2007 ALIESGLGTDFSPDVGYNGYTR 22 Unmodified _ALIESGLGTDFSPDVGYNGYTR_ 0 0 0 Q5JRX3 Q5JRX3 Q5JRX3 PITRM1 Presequence protease, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1166.5595703125 2 1166.55823 2331.10191 1.6197 0.0018894 -0.1474 -0.00017195 1.4723 0.0017175 1167.0595080085 93.126 0.39774 93.126 92.941 93.339 0 22 7 4 0 0 0 4.7864E-05 1 110078 66.285 51.254 1 3814800 1706 2325 1572 1595 2008 2008 ALIEVLQPLIAEHQAR 16 Unmodified _ALIEVLQPLIAEHQAR_ 0 0 0 P23381 P23381 P23381 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS MULTI-MSMS 210214_Eclipse_Hela_QC 601.349975585938 3 601.015866 1800.02577 0.59206 0.00035584 -0.16011 -9.6229E-05 0.43195 0.00025961 601.015903255109 89.585 1.0436 89.585 89.113 90.157 0 79 20 6 0 0 0 0.0010311 1 104852 50.305 43.735 1 103350000 1707 1022 1573 1596 2009 2009 ALIEVLQPLIAEHQAR 16 Unmodified _ALIEVLQPLIAEHQAR_ 0 0 0 P23381 P23381 P23381 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS MULTI-MSMS 210214_Eclipse_Hela_QC 901.522583007812 2 901.02016 1800.02577 0.68331 0.00061567 -0.15047 -0.00013557 0.53284 0.0004801 901.020189941772 89.585 0.44705 89.585 89.312 89.76 0 14 8 2 0 0 0 0.0083853 1 105089 53.237 47.853 1 4739700 1708 1022 1573 1596 2010 2010 ALIGDDVGLTSYK 13 Unmodified _ALIGDDVGLTSYK_ 0 0 0 Q53F19 Q53F19 Q53F19 C17orf85 Uncharacterized protein C17orf85 MULTI-MSMS 210214_Eclipse_Hela_QC 676.358215332031 2 676.358825 1350.7031 0.87859 0.00059424 -0.75854 -0.00051304 0.12005 8.1199E-05 676.358309901111 69.147 0.48132 69.147 68.896 69.377 0 21 9 3 0 0 0 0.0099108 1 76690 45.433 38.154 1 7124900 1709 2297 1574 1597 2011 2011 ALILSPTR 8 Unmodified _ALILSPTR_ 0 0 0 Q8TDD1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 MULTI-MSMS 210214_Eclipse_Hela_QC 435.773834228516 2 435.774003 869.533452 -0.050129 -2.1845E-05 0.0052515 2.2885E-06 -0.044878 -1.9556E-05 435.773985832404 41.065 0.69633 41.065 40.562 41.258 0 21 13 2 0 0 0 0.054319 1 37035 40.098 0 1 4039700 1710 2803 1575 1598 2012 2012 ALINADELASDVAGAEALLDR 21 Unmodified _ALINADELASDVAGAEALLDR_ 0 0 0 Q13813 Q13813 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1064.05407714844 2 1064.05004 2126.08553 1.0037 0.001068 1.6009 0.0017034 2.6046 0.0027714 1064.55318405657 109.08 0.84544 109.08 108.56 109.4 0 38 16 3 0 0 0 8.9821E-65 2 131684 214.53 191.41 1 60147000 1711 2034 1576 1599 2013;2014 2013 ALINMSSLPAQDK 13 Unmodified _ALINMSSLPAQDK_ 0 0 0 Q53F19 Q53F19 Q53F19 C17orf85 Uncharacterized protein C17orf85 MULTI-MSMS 210214_Eclipse_Hela_QC 694.366638183594 2 694.366127 1386.7177 0.95402 0.00066244 -0.39636 -0.00027522 0.55766 0.00038722 694.365811909882 63.445 0.44803 63.445 63.224 63.672 0 19 8 3 0 0 0 0.00028654 1 68648 84.17 55.771 1 3718100 1712 2297 1577 1600 2015 2015 ALINSPEGAVGR 12 Unmodified _ALINSPEGAVGR_ 0 0 0 O00115 O00115 O00115 DNASE2 Deoxyribonuclease-2-alpha MULTI-MSMS 210214_Eclipse_Hela_QC 592.826782226562 2 592.325119 1182.63569 0.76826 0.00045506 0.12914 7.6495E-05 0.8974 0.00053155 592.324867054938 42.088 0.79194 42.088 41.606 42.398 0 35 15 4 0 0 0 0.00041226 1 38497 72.365 45.111 1 19480000 1713 124 1578 1601 2016 2016 ALIPLALEGTDVGQTK 16 Unmodified _ALIPLALEGTDVGQTK_ 0 0 0 Q9H3U1 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A MULTI-MSMS 210214_Eclipse_Hela_QC 813.459716796875 2 813.45907 1624.90359 0.63736 0.00051846 0.30913 0.00025147 0.94649 0.00076993 813.459363204443 88.221 0.68575 88.221 87.88 88.566 0 35 13 4 0 0 0 6.5333E-05 2 103203 84.718 80.955 1 9935200 1714 3461 1579 1602 2017;2018 2018 ALIQCAK 7 Unmodified _ALIQCAK_ 0 0 0 P18206 P18206 P18206 VCL Vinculin MSMS 210214_Eclipse_Hela_QC 402.225463867188 2 402.225831 802.437109 NaN NaN NaN NaN NaN NaN NaN 21.791 1 21.791 21.291 22.291 0 0 0 0 0.049427 1 9657 63.642 13.336 1 1715 952 1580 1603 2019 2019 ALIQYFSPYVSADMHR 16 Unmodified _ALIQYFSPYVSADMHR_ 0 0 0 Q13098 Q13098 Q13098 GPS1 COP9 signalosome complex subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 633.648742675781 3 633.313694 1896.91925 1.1334 0.00071779 -0.18554 -0.0001175 0.94784 0.00060028 633.647975456172 84.77 0.84581 84.77 84.45 85.296 0 46 16 5 0 0 0 0.00026879 1 98384 55.755 51.05 1 12320000 1716 1942 1581 1604 2020 2020 ALISPFDVIK 10 Unmodified _ALISPFDVIK_ 0 0 0 Q9HC21 Q9HC21 Q9HC21 SLC25A19 Mitochondrial thiamine pyrophosphate carrier MULTI-MSMS 210214_Eclipse_Hela_QC 552.330810546875 2 551.828975 1101.6434 0.85362 0.00047105 0.84905 0.00046853 1.7027 0.00093958 551.829265235788 91.07 0.54689 91.07 90.803 91.35 0 23 10 3 0 0 0 0.032141 1 107257 39.547 3.6667 1 2887600 1717 3552 1582 1605 2021 2021 ALIVEPSR 8 Unmodified _ALIVEPSR_ 0 0 0 Q92499 Q92499 Q92499 DDX1 ATP-dependent RNA helicase DDX1 MULTI-MSMS 210214_Eclipse_Hela_QC 442.764068603516 2 442.763635 883.512717 0.34754 0.00015388 0.1085 4.804E-05 0.45604 0.00020192 442.763779913821 34.295 0.87947 34.295 33.966 34.845 0 37 18 3 0 0 0 0.011863 1 27365 64.236 30.721 1 32237000 1718 2875 1583 1606 2022 2022 ALIVLAHSER 10 Unmodified _ALIVLAHSER_ 0 0 0 P15559 P15559 P15559 NQO1 NAD(P)H dehydrogenase [quinone] 1 MULTI-MSMS 210214_Eclipse_Hela_QC 554.827026367188 2 554.827298 1107.64004 0.34652 0.00019226 -0.30921 -0.00017156 0.037311 2.0701E-05 554.82711639437 32.207 0.64323 32.207 31.917 32.561 0 21 12 2 0 0 0 0.0026457 1 24491 66.692 53.655 1 5216500 1719 903 1584 1607 2023 2023 ALIVVPYAEGVIPDEAK 17 Unmodified _ALIVVPYAEGVIPDEAK_ 0 0 0 Q05519 Q05519 Q05519 SRSF11 Serine/arginine-rich splicing factor 11 MULTI-MSMS 210214_Eclipse_Hela_QC 892.998718261719 2 892.495652 1782.97675 1.8537 0.0016544 0.46462 0.00041467 2.3183 0.0020691 892.49601091735 98.735 0.79616 98.735 98.311 99.108 0 59 15 5 0 0 0 3.954E-05 1 117499 86.313 77.124 1 34587000 1720 1856 1585 1608 2024 2024 ALLADIEAHYQDPSLPYPK 19 Unmodified _ALLADIEAHYQDPSLPYPK_ 0 0 0 Q12768 Q12768 Q12768 KIAA0196 WASH complex subunit strumpellin MULTI-MSMS 210214_Eclipse_Hela_QC 714.704772949219 3 714.368633 2140.08407 1.0546 0.00075339 0.66701 0.00047649 1.7216 0.0012299 714.703450032944 88.69 0.44438 88.69 88.37 88.815 0 19 8 3 0 0 0 0.0005372 2 103830 49.463 39.088 1 7321600 1721 1906 1586 1609 2025;2026 2026 ALLAEGVILR 10 Unmodified _ALLAEGVILR_ 0 0 0 Q9Y3D9 Q9Y3D9 Q9Y3D9 MRPS23 28S ribosomal protein S23, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 527.834899902344 2 527.834591 1053.65463 0.84193 0.0004444 1.6639 0.00087825 2.5058 0.0013227 527.834525126331 73.004 0.89681 73.004 72.662 73.559 0 47 17 4 0 0 0 0.0042957 2 81962 60.91 28.07 1 5478900 1722 4066 1587 1610 2027;2028 2027 ALLAEHLLK 9 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ALLAEHLLK_ 1 0 0 Q9NZD2 Q9NZD2 Q9NZD2 GLTP Glycolipid transfer protein MULTI-MSMS 210214_Eclipse_Hela_QC 525.3212890625 2 525.321317 1048.62808 0.63198 0.00033199 -0.19467 -0.00010226 0.43731 0.00022973 525.321118784687 90.188 0.54619 90.188 89.909 90.455 0 23 10 3 0 0 0 0.0026967 1 105923 63.48 44.749 1 2470300 1723 3761 1588 1611 2029 2029 ALLAGQAALLQALMELAPASAPAR 24 Unmodified _ALLAGQAALLQALMELAPASAPAR_ 0 0 0 Q9BTY7 Q9BTY7 Q9BTY7 HGH1 Protein HGH1 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 1174.224609375 2 1174.16194 2346.30934 1.302 0.0015287 1.3575 0.001594 2.6595 0.0031227 1174.16725264577 111.24 0.24927 111.24 111.15 111.39 0 8 4 3 0 0 0 0.052361 1 135074 22.475 17.091 1 1065800 1724 3281 1589 1612 2030 2030 ALLAMYTNQAEQCR 14 Unmodified _ALLAMYTNQAEQCR_ 0 0 0 O76094 O76094 O76094 SRP72 Signal recognition particle subunit SRP72 MULTI-MSMS 210214_Eclipse_Hela_QC 835.399719238281 2 834.895257 1667.77596 1.1032 0.00092104 0.10005 8.3535E-05 1.2032 0.0010046 834.89540763806 58.817 0.5476 58.817 58.557 59.104 0 31 10 4 0 0 0 3.2244E-09 1 62188 120.09 113.99 1 9188800 1725 510 1590 1613 2031 2031 ALLANALTSALR 12 Unmodified _ALLANALTSALR_ 0 0 0 P57088 P57088 P57088 TMEM33 Transmembrane protein 33 MULTI-MSMS 210214_Eclipse_Hela_QC 607.367736816406 2 607.366787 1212.71902 0.34103 0.00020713 0.085098 5.1686E-05 0.42613 0.00025882 607.366809373542 82.948 0.78148 82.948 82.673 83.454 0 41 15 4 0 0 0 2.8299E-08 1 95888 128.27 74.302 1 16863000 1726 1562 1591 1614 2032 2032 ALLANQDSGEVQQDPK 16 Unmodified _ALLANQDSGEVQQDPK_ 0 0 0 Q9NP81 Q9NP81 Q9NP81 SARS2 Serine--tRNA ligase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 856.927001953125 2 856.926123 1711.83769 0.67683 0.00057999 2.838 0.002432 3.5149 0.003012 856.927234473366 34.625 0.58349 34.625 34.411 34.995 0 25 12 3 0 0 0 0.003002 1 27944 48.741 33.475 1 7013400 1727 3576 1592 1615 2033 2033 ALLCYNR 7 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ALLCYNR_ 1 0 0 Q9UHD1 Q9UHD1 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 MULTI-SECPEP 210214_Eclipse_Hela_QC 952.0654296875 1 951.471663 950.464386 1.4343 0.0013647 0.29112 0.00027699 1.7254 0.0016417 951.47176875754 71.161 0.79738 71.161 70.72 71.518 0 27 15 2 0 0 0 0.016442 1 79765 89.775 70.97 1 8776800 1728 3861 1593 1616 2034 2034 ALLDASETTSTR 12 Unmodified _ALLDASETTSTR_ 0 0 0 Q14258 Q14258 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 MULTI-MSMS 210214_Eclipse_Hela_QC 632.82275390625 2 632.822606 1263.63066 0.33351 0.00021105 0.45298 0.00028665 0.78649 0.00049771 632.822870168346 36.456 0.64249 36.456 36.124 36.766 0 30 12 3 0 0 0 6.7092E-06 1 30427 112.75 96.546 1 24506000 1729 2078 1594 1617 2035 2035 ALLDFEDK 8 Unmodified _ALLDFEDK_ 0 0 0 Q14764 Q14764 Q14764 MVP Major vault protein MSMS 210214_Eclipse_Hela_QC 475.744995117188 2 475.745108 949.475663 NaN NaN NaN NaN NaN NaN NaN 60.984 1 60.984 60.484 61.484 0 0 0 0 0.012678 1 65305 75.854 38.127 1 1730 2111 1595 1618 2036 2036 ALLDGMGSCLFER 13 Unmodified _ALLDGMGSCLFER_ 0 0 0 Q13444 Q13444 Q13444 ADAM15 Disintegrin and metalloproteinase domain-containing protein 15 MULTI-MSMS 210214_Eclipse_Hela_QC 734.850524902344 2 734.849787 1467.68502 1.5197 0.0011167 -1.5612 -0.0011472 -0.041545 -3.053E-05 734.847959852946 92.495 0.647 92.495 92.245 92.892 0 19 12 2 0 0 0 0.0040709 1 109155 51.268 27.839 1 1685400 1731 1991 1596 1619 2037 2037 ALLDQLMGTAR 11 Unmodified _ALLDQLMGTAR_ 0 0 0 Q9NQ29 Q9NQ29 Q9NQ29 LUC7L Putative RNA-binding protein Luc7-like 1 MULTI-MSMS 210214_Eclipse_Hela_QC 594.825317382812 2 594.823898 1187.63324 1.0417 0.0006196 0.26786 0.00015933 1.3095 0.00077893 594.824352749669 85.581 0.89407 85.581 84.997 85.891 0 40 17 4 0 0 0 0.0020479 1 99580 64.04 39.885 1 4654400 1732 3591 1597 1620 2038 2038 ALLDSSENCDR 11 Unmodified _ALLDSSENCDR_ 0 0 0 Q5VT52 Q5VT52 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 640.282531738281 2 640.282791 1278.55103 0.43032 0.00027553 -0.41529 -0.00026591 0.015028 9.6223E-06 640.282328783923 27.746 0.2931 27.746 27.552 27.845 0 10 5 2 0 0 0 0.018263 1 18150 44.318 30.111 1 3808700 1733 2377 1598 1621 2039 2039 ALLDYGVTADAR 12 Unmodified _ALLDYGVTADAR_ 0 0 0 Q00653 Q00653 Q00653 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit MULTI-MSMS 210214_Eclipse_Hela_QC 632.830322265625 2 632.830234 1263.64592 -0.0071652 -4.5343E-06 -1.9314 -0.0012222 -1.9385 -0.0012268 632.829010692083 62.176 2.5788 62.176 61.342 63.921 0 124 51 3 0 0 0 0.00034736 1 66437 76.465 54.958 1 176980000 1734 1804 1599 1622 2040 2040 ALLEAFGTTGFQATNFGR 18 Unmodified _ALLEAFGTTGFQATNFGR_ 0 0 0 P49366 P49366 P49366 DHPS Deoxyhypusine synthase MULTI-SECPEP 210214_Eclipse_Hela_QC 951.418212890625 2 950.981232 1899.94791 1.6531 0.0015721 0.72749 0.00069183 2.3806 0.0022639 950.981612595435 98.187 0.54694 98.187 97.864 98.411 0 14 10 2 0 0 0 0.0084699 1 117060 56.122 42.443 1 2803100 1735 1368 1600 1623 2041 2041 ALLEAGALPNAPNSYGR 17 Unmodified _ALLEAGALPNAPNSYGR_ 0 0 0 P42771 P42771 P42771 CDKN2A Cyclin-dependent kinase inhibitor 2A MULTI-MSMS 210214_Eclipse_Hela_QC 857.452026367188 2 857.449568 1712.88458 1.3123 0.0011252 1.0094 0.00086551 2.3217 0.0019907 857.450173539314 69.212 0.87291 69.212 68.803 69.676 0 41 17 3 0 0 0 5.8458E-12 1 76760 126.76 93.54 1 31170000 1736 1281 1601 1624 2042 2042 ALLELQLEPEELYQTFQR 18 Unmodified _ALLELQLEPEELYQTFQR_ 0 0 0 P13639 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 210214_Eclipse_Hela_QC 1111.08386230469 2 1110.58098 2219.1474 1.048 0.0011639 0.81688 0.00090722 1.8649 0.0020711 1111.08314392891 107.53 0.2484 107.53 107.41 107.66 0 8 4 2 0 0 0 2.7438E-56 1 129998 203.82 190.1 1 39123000 1737 861 1602 1625 2043 2043 ALLELVPWR 9 Unmodified _ALLELVPWR_ 0 0 0 Q9UPN3 Q9UPN3 Q9UPN3 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 MULTI-MSMS 210214_Eclipse_Hela_QC 548.829284667969 2 548.829309 1095.64407 1.1984 0.0006577 -0.86991 -0.00047743 0.32846 0.00018027 548.828792382954 97.306 0.44796 97.306 97.069 97.517 0 15 8 2 0 0 0 0.032135 1 115897 43.246 33.658 1 818740 1738 3969 1603 1626 2044 2044 ALLEMAEEK 9 Unmodified _ALLEMAEEK_ 0 0 0 P40222 P40222 P40222 TXLNA Alpha-taxilin MULTI-MSMS 210214_Eclipse_Hela_QC 517.766784667969 2 517.26535 1032.51615 0.49213 0.00025456 -0.31154 -0.00016115 0.18059 9.3413E-05 517.265221038137 46.983 0.9452 46.983 46.677 47.623 0 32 18 2 0 0 0 0.0057175 1 45632 63.419 42.86 1 9693500 1739 1238 1604 1627 2045 2045 ALLEVLGR 8 Unmodified _ALLEVLGR_ 0 0 0 Q16775 Q16775 Q16775 HAGH Hydroxyacylglutathione hydrolase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 435.773834228516 2 435.774003 869.533452 -0.04349 -1.8952E-05 -3.0555 -0.0013315 -3.0989 -0.0013504 435.773940777703 65.918 0.6469 65.918 65.552 66.199 0 36 12 4 0 0 0 0.0039883 1 72171 84.244 42.742 1 6942000 1740 2254 1605 1628 2046 2046 ALLEVVQSGGK 11 Unmodified _ALLEVVQSGGK_ 0 0 0 O14818;Q8TAA3 O14818 O14818 PSMA7;PSMA8 Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like MULTI-MSMS 210214_Eclipse_Hela_QC 550.819946289062 2 550.819138 1099.62372 0.64051 0.0003528 0.54106 0.00029803 1.1816 0.00065083 550.819456258285 49.59 1.1924 49.59 49.187 50.38 0 63 23 4 0 0 0 1.9647E-05 2 48968 111.06 77.264 1 75702000 1741 211 1606 1629 2047;2048 2047 ALLEVYNMMSR 11 Unmodified _ALLEVYNMMSR_ 0 0 0 CON__Q3KUS7 CON__Q3KUS7 CON__Q3KUS7 MULTI-MSMS 210214_Eclipse_Hela_QC 664.333312988281 2 663.830866 1325.64718 0.73554 0.00048827 -0.14289 -9.4854E-05 0.59265 0.00039342 663.830820334453 83.031 0.79646 83.031 82.757 83.554 0 48 15 4 0 0 0 0.00021018 1 95977 91.584 79.348 1 15357000 + 1742 94 1607 1630 2049 2049 ALLFIPR 7 Unmodified _ALLFIPR_ 0 0 0 P08238 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 210214_Eclipse_Hela_QC 415.268737792969 2 415.268356 828.522159 0.52608 0.00021846 -0.12652 -5.254E-05 0.39956 0.00016592 415.268268811912 71.243 1.643 71.243 70.621 72.264 0 87 32 5 0 0 0 0.00036451 2 79682 148.12 44.708 1 131350000 1743 745 1608 1631 2050;2051 2050 ALLFIPR 7 Unmodified _ALLFIPR_ 0 0 0 P08238 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta MULTI-MSMS 210214_Eclipse_Hela_QC 415.268096923828 2 415.268356 828.522159 0.49922 0.00020731 -0.38416 -0.00015953 0.11506 4.778E-05 415.268164553108 72.711 0.74713 72.711 72.264 73.011 0 21 14 2 0 0 0 0.040066 1 81780 51.036 0 1 1621900 1744 745 1608 1631 2052 2052 ALLFSNNTQELHPDPFQTEDPFK 23 Unmodified _ALLFSNNTQELHPDPFQTEDPFK_ 0 0 0 Q9UBC2 Q9UBC2 Q9UBC2 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 MULTI-MSMS 210214_Eclipse_Hela_QC 897.106262207031 3 896.769525 2687.28675 0.69062 0.00061933 0.3339 0.00029943 1.0245 0.00091876 897.438121142883 95.854 0.7025 95.854 95.521 96.224 0 32 14 3 0 0 0 0.0028162 1 113721 36.246 33.09 1 13626000 1745 3813 1609 1632 2053 2053 ALLFVPR 7 Unmodified _ALLFVPR_ 0 0 0 P07900 P07900 P07900 HSP90AA1 Heat shock protein HSP 90-alpha MULTI-MSMS 210214_Eclipse_Hela_QC 408.260772705078 2 408.260531 814.506509 0.12948 5.2862E-05 0.25853 0.00010555 0.38802 0.00015841 408.260578765553 63.31 1.2941 63.31 62.926 64.22 0 68 25 4 0 0 0 0.0073713 2 68238 85.306 0 1 62068000 1746 730 1610 1633 2054;2055 2054 ALLGPALK 8 Unmodified _ALLGPALK_ 0 0 0 P35250 P35250 P35250 RFC2 Replication factor C subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 391.760009765625 2 391.760364 781.506175 0.60351 0.00023643 -0.023032 -9.0231E-06 0.58048 0.00022741 391.760296009203 43.833 0.74621 43.833 43.543 44.29 0 21 14 2 0 0 0 0.017645 1 41011 55.604 14.683 1 8790500 1747 1183 1611 1634 2056 2056 ALLGYADNQCK 11 Unmodified _ALLGYADNQCK_ 0 0 0 Q9HC38 Q9HC38 Q9HC38 GLOD4 Glyoxalase domain-containing protein 4 MULTI-MSMS 210214_Eclipse_Hela_QC 626.80322265625 2 626.803162 1251.59177 0.053508 3.3539E-05 -0.12476 -7.8199E-05 -0.07125 -4.466E-05 626.803129329466 38.556 0.93849 38.556 38.193 39.131 0 36 14 3 0 0 0 1.6612E-08 1 33429 133.23 128.03 1 38318000 1748 3554 1612 1635 2057 2057 ALLLDALR 8 Unmodified _ALLLDALR_ 0 0 0 Q8N2G8 Q8N2G8 Q8N2G8 GHDC GH3 domain-containing protein MULTI-MSMS 210214_Eclipse_Hela_QC 442.782012939453 2 442.781828 883.549102 0.91383 0.00040463 -0.10956 -4.8512E-05 0.80427 0.00035612 442.781751973136 75.737 0.42789 75.737 75.402 75.83 0 17 8 3 0 0 0 0.054319 1 85891 40.098 6.2852 1 2248200 1749 2674 1613 1636 2058 2058 ALLLEAQK 8 Unmodified _ALLLEAQK_ 0 0 0 Q96ER9 Q96ER9 Q96ER9 CCDC51 Coiled-coil domain-containing protein 51 MULTI-MSMS 210214_Eclipse_Hela_QC 443.273834228516 2 443.273835 884.533118 0.20037 8.8819E-05 -0.22541 -9.9917E-05 -0.025038 -1.1099E-05 443.273657706661 37.037 0.5412 37.037 36.718 37.26 0 18 10 2 0 0 0 0.0085552 1 31414 69.176 32.082 1 4965400 1750 3018 1614 1637 2059 2059 ALLLSTYIK 9 Unmodified _ALLLSTYIK_ 0 0 0 O95782;O94973 O95782;O94973 O95782 AP2A1;AP2A2 AP-2 complex subunit alpha-1;AP-2 complex subunit alpha-2 MULTI-MSMS 210214_Eclipse_Hela_QC 511.318389892578 2 511.318243 1020.62193 0.1802 9.214E-05 0.11648 5.9561E-05 0.29669 0.0001517 511.318255214635 73.901 0.64975 73.901 73.559 74.209 0 32 12 3 0 0 0 0.00095043 1 83214 85.212 85.212 1 8189400 1751 594;528 1615 1638 2060 2060 ALLLTDQHLYK 11 Unmodified _ALLLTDQHLYK_ 0 0 0 B0I1T2 B0I1T2 B0I1T2 MYO1G Unconventional myosin-Ig;Minor histocompatibility antigen HA-2 MULTI-MSMS 210214_Eclipse_Hela_QC 438.918334960938 3 438.918722 1313.73434 0.4146 0.00018198 -0.058571 -2.5708E-05 0.35603 0.00015627 438.918711387786 53.086 0.8476 53.086 52.743 53.59 0 38 16 4 0 0 0 0.0015267 1 54125 45.829 38.856 1 12819000 1752 27 1616 1639 2061 2061 ALLLTDQHLYK 11 Unmodified _ALLLTDQHLYK_ 0 0 0 B0I1T2 B0I1T2 B0I1T2 MYO1G Unconventional myosin-Ig;Minor histocompatibility antigen HA-2 MULTI-MSMS 210214_Eclipse_Hela_QC 658.375244140625 2 657.874445 1313.73434 0.7563 0.00049755 -0.4885 -0.00032137 0.2678 0.00017618 657.874416515702 53.051 0.94722 53.051 52.444 53.391 0 29 18 3 0 0 0 0.0040109 1 54160 54.416 41.063 1 4835100 1753 27 1616 1639 2062 2062 ALLLVPASVNCLR 13 Unmodified _ALLLVPASVNCLR_ 0 0 0 Q5SRE5 Q5SRE5 Q5SRE5 NUP188 Nucleoporin NUP188 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 713.416015625 2 713.415954 1424.81735 1.0211 0.00072849 -1.0832 -0.00077278 -0.062078 -4.4288E-05 713.415702793931 87.49 0.49722 87.49 87.184 87.681 0 24 9 4 0 0 0 0.013316 1 102174 46.462 41.766 1 3588400 1754 2341 1617 1640 2063 2063 ALLMCEACR 9 Unmodified _ALLMCEACR_ 0 0 0 P40938 P40938 P40938 RFC3 Replication factor C subunit 3 MULTI-MSMS 210214_Eclipse_Hela_QC 562.257385253906 2 562.256479 1122.49841 0.090417 5.0838E-05 -0.26434 -0.00014863 -0.17392 -9.7788E-05 562.256400288457 39.087 0.54336 39.087 38.835 39.378 0 22 11 2 0 0 0 0.0054142 1 34413 64.207 49.425 1 7916200 1755 1250 1618 1641 2064 2064 ALLNNSHYYHMAHGK 15 Unmodified _ALLNNSHYYHMAHGK_ 0 0 0 P09622 P09622 P09622 DLD Dihydrolipoyl dehydrogenase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 586.287353515625 3 585.950979 1754.83111 0.63502 0.00037209 1.9127 0.0011207 2.5477 0.0014928 586.287519769072 23.649 0.64786 23.649 23.351 23.999 0 22 12 3 0 0 0 0.0016663 1 12328 34.82 30.718 1 8137500 1756 780 1619 1642 2065 2065 ALLPHVLCK 9 Unmodified _ALLPHVLCK_ 0 0 0 Q1KMD3 Q1KMD3 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 525.810729980469 2 525.810062 1049.60557 0.55515 0.00029191 0.22762 0.00011968 0.78277 0.00041159 525.810202166325 43.756 0.59731 43.756 43.444 44.041 0 22 11 3 0 0 0 0.0080789 1 40914 57.281 41.137 1 6223500 1757 2263 1620 1643 2066 2066 ALLQEMPLTALLR 13 Unmodified _ALLQEMPLTALLR_ 0 0 0 P10155 P10155 P10155 TROVE2 60 kDa SS-A/Ro ribonucleoprotein MULTI-MSMS 210214_Eclipse_Hela_QC 734.932983398438 2 734.931437 1467.84832 1.4654 0.001077 0.050322 3.6983E-05 1.5157 0.0011139 735.432860801062 106.91 0.29842 106.91 106.76 107.06 0 10 5 2 0 0 0 6.4441E-09 1 129195 128.81 86.81 1 21015000 1758 799 1621 1644 2067 2067 ALLQEQFR 8 Unmodified _ALLQEQFR_ 0 0 0 Q9NUQ8 Q9NUQ8 Q9NUQ8 ABCF3 ATP-binding cassette sub-family F member 3 MULTI-MSMS 210214_Eclipse_Hela_QC 502.780334472656 2 502.779816 1003.54508 0.27768 0.00013961 -0.1156 -5.8119E-05 0.16208 8.1493E-05 502.77982015475 45.513 0.64639 45.513 45.135 45.781 0 17 12 2 0 0 0 0.038793 1 43496 46.016 16.64 1 5591200 1759 3663 1622 1645 2068 2068 ALLQQQPEDDSK 12 Unmodified _ALLQQQPEDDSK_ 0 0 0 Q9UHB9 Q9UHB9 Q9UHB9 SRP68 Signal recognition particle subunit SRP68 MULTI-MSMS 210214_Eclipse_Hela_QC 686.34228515625 2 686.341163 1370.66777 0.53068 0.00036423 -0.62666 -0.0004301 -0.095979 -6.5874E-05 686.341340178398 27.547 0.68645 27.547 27.303 27.99 0 36 13 4 0 0 0 2.5484E-08 1 17872 128.86 110.55 1 14444000 1760 3860 1623 1646 2069 2069 ALLQSSASR 9 Unmodified _ALLQSSASR_ 0 0 0 Q9UQ80 Q9UQ80 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 MULTI-MSMS 210214_Eclipse_Hela_QC 466.763488769531 2 466.761623 931.508694 0.21715 0.00010136 -0.52169 -0.00024351 -0.30454 -0.00014215 466.761370964938 22.38 1.0945 22.38 22.007 23.102 0 46 21 5 0 0 0 0.043265 1 10358 38.176 15.285 1 148200000 1761 3978 1624 1647 2070 2070 ALLQTHPEAQR 11 Unmodified _ALLQTHPEAQR_ 0 0 0 Q96CP2 Q96CP2 Q96CP2 FLYWCH2 FLYWCH family member 2 MULTI-MSMS 210214_Eclipse_Hela_QC 422.23193359375 3 421.898321 1262.67313 -0.00023357 -9.8545E-08 -0.59399 -0.00025061 -0.59423 -0.0002507 421.898198105786 22.429 0.59694 22.429 22.206 22.803 0 21 11 3 0 0 0 0.0018507 1 10599 45.077 35.335 1 13190000 1762 2991 1625 1648 2071 2071 ALLQTHPEAQR 11 Unmodified _ALLQTHPEAQR_ 0 0 0 Q96CP2 Q96CP2 Q96CP2 FLYWCH2 FLYWCH family member 2 MULTI-MSMS 210214_Eclipse_Hela_QC 632.343078613281 2 632.343843 1262.67313 0.4173 0.00026388 -0.63998 -0.00040469 -0.22268 -0.00014081 632.343409461292 22.429 0.29824 22.429 22.255 22.553 0 13 5 3 0 0 0 4.4563E-05 1 10601 102.07 88.298 1 10633000 1763 2991 1625 1648 2072 2072 ALLSDMVR 8 Unmodified _ALLSDMVR_ 0 0 0 O14776 O14776 O14776 TCERG1 Transcription elongation regulator 1 MULTI-MSMS 210214_Eclipse_Hela_QC 452.750030517578 2 452.74967 903.484787 0.23223 0.00010514 -0.1276 -5.7772E-05 0.10463 4.737E-05 452.749607303793 54.749 0.59691 54.749 54.426 55.023 0 22 11 2 0 0 0 0.0048443 1 56395 81.297 47.558 1 8361600 1764 208 1626 1649 2073 2073 ALLSGAGPADVYTFNFSK 18 Unmodified _ALLSGAGPADVYTFNFSK_ 0 0 0 Q13426 Q13426 Q13426 XRCC4 DNA repair protein XRCC4 MULTI-MSMS 210214_Eclipse_Hela_QC 929.478332519531 2 929.472709 1856.93086 1.2519 0.0011636 1.1031 0.0010253 2.3549 0.0021888 929.974850223805 95.79 0.55649 95.79 95.372 95.929 0 17 11 2 0 0 0 0.044465 1 113594 29.299 19.612 1 2927700 1765 1984 1627 1650 2074 2074 ALLSHDSGSDHLAFVR 16 Unmodified _ALLSHDSGSDHLAFVR_ 0 0 0 Q7L2E3 Q7L2E3 Q7L2E3 DHX30 Putative ATP-dependent RNA helicase DHX30 MULTI-MSMS 210214_Eclipse_Hela_QC 575.962646484375 3 575.62867 1723.86418 0.50794 0.00029238 -0.82494 -0.00047486 -0.317 -0.00018247 575.962391788693 46.785 0.39837 46.785 46.478 46.877 0 10 7 2 0 0 0 0.051538 1 45177 11.318 5.6587 1 3429400 1766 2514 1628 1651 2075 2075 ALLTLADGR 9 Unmodified _ALLTLADGR_ 0 0 0 P12429 P12429 P12429 ANXA3 Annexin A3 MULTI-MSMS 210214_Eclipse_Hela_QC 465.274719238281 2 465.274367 928.53418 0.33213 0.00015453 -0.13472 -6.2684E-05 0.1974 9.1847E-05 465.274244212251 52.119 1.0955 52.119 51.747 52.842 0 55 21 4 0 0 0 0.00082527 1 52635 87.251 48.445 1 40624000 1767 851 1629 1652 2076 2076 ALLTPVAIAAGR 12 Unmodified _ALLTPVAIAAGR_ 0 0 0 P00390 P00390 P00390 GSR Glutathione reductase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 576.859497070312 2 576.858598 1151.70264 1.2725 0.00073406 0.1142 6.5877E-05 1.3867 0.00079994 576.858742143363 71.045 0.74738 71.045 70.72 71.468 0 40 14 4 0 0 0 0.00018281 1 79233 87.308 70.531 1 19325000 1768 623 1630 1653 2077 2077 ALLVEPVINSYLLAER 16 Unmodified _ALLVEPVINSYLLAER_ 0 0 0 P21980 P21980 P21980 TGM2 Protein-glutamine gamma-glutamyltransferase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 901.019836425781 2 900.516919 1799.01929 0.60944 0.00054881 -0.4121 -0.0003711 0.19735 0.00017771 901.018604211926 106.25 0.29857 106.25 106.12 106.42 0 15 5 4 0 0 0 3.3035E-17 1 128301 149.26 134.38 1 64650000 1769 1001 1631 1654 2078 2078 ALLVQVVNK 9 Unmodified _ALLVQVVNK_ 0 0 0 Q03701 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 210214_Eclipse_Hela_QC 492.317169189453 2 492.316035 982.617516 0.47574 0.00023421 -0.21307 -0.0001049 0.26266 0.00012931 492.315857121171 49.296 0.54756 49.296 49.038 49.585 0 20 10 3 0 0 0 0.0052026 1 48830 64.757 41.715 1 6554000 1770 1843 1632 1655 2079 2079 ALLVTASQCQQPAENK 16 Unmodified _ALLVTASQCQQPAENK_ 0 0 0 Q01518 Q01518 Q01518 CAP1 Adenylyl cyclase-associated protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 879.947937011719 2 879.446168 1756.87778 0.62561 0.00055019 -0.01205 -1.0597E-05 0.61356 0.0005396 879.446302223862 38.159 1.0896 38.159 37.696 38.785 0 68 21 5 0 0 0 2.5426E-38 1 32824 191.33 175.44 1 93881000 1771 1816 1633 1656 2080 2080 ALLYEDALYTVLHR 14 Unmodified _ALLYEDALYTVLHR_ 0 0 0 Q70J99 Q70J99 Q70J99 UNC13D Protein unc-13 homolog D MULTI-MSMS 210214_Eclipse_Hela_QC 559.97412109375 3 559.638395 1675.89336 0.88367 0.00049454 0.19623 0.00010982 1.0799 0.00060436 559.638514995948 98.861 0.44746 98.861 98.66 99.108 0 15 8 2 0 0 0 0.033801 1 118032 27.969 16.707 1 1473600 1772 2500 1634 1657 2081 2081 ALLYTAVNQLAMGSSSAEDEK 21 Unmodified _ALLYTAVNQLAMGSSSAEDEK_ 0 0 0 Q6PGP7 Q6PGP7 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 MULTI-MSMS 210214_Eclipse_Hela_QC 1099.53869628906 2 1099.53591 2197.05726 0.66517 0.00073138 0.59327 0.00065232 1.2584 0.0013837 1099.53741070002 86.762 0.54681 86.762 86.439 86.986 0 20 10 3 0 0 0 0.03292 1 101254 29.937 18.678 1 2348900 1773 2459 1635 1658 2082 2082 ALMAPNLDSFGR 12 Unmodified _ALMAPNLDSFGR_ 0 0 0 Q9Y5B6 Q9Y5B6 Q9Y5B6 PAXBP1 PAX3- and PAX7-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 646.327331542969 2 646.326805 1290.63906 0.32909 0.0002127 1.0269 0.0006637 1.356 0.0008764 646.327541084849 75.178 0.29969 75.178 75.003 75.303 0 9 5 2 0 0 0 0.040395 1 85215 37.556 26.405 1 2899400 1774 4110 1636 1659 2083 2083 ALMDEVVK 8 Unmodified _ALMDEVVK_ 0 0 0 P00558 P00558 P00558 PGK1 Phosphoglycerate kinase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 452.744659423828 2 452.744053 903.473554 0.60528 0.00027404 -0.75434 -0.00034152 -0.14905 -6.7484E-05 452.743837734144 47.1 1.8903 47.1 46.28 48.17 0 92 37 4 0 0 0 0.0034941 2 45682 86.472 44.97 1 515160000 1775 630 1637 1660 2084;2085 2084 ALMDEVVK 8 Oxidation (M) _ALM(Oxidation (M))DEVVK_ ALM(1)DEVVK ALM(88)DEVVK 0 1 0 P00558 P00558 P00558 PGK1 Phosphoglycerate kinase 1 MULTI-SECPEP 210214_Eclipse_Hela_QC 460.736083984375 2 460.741511 919.468469 0.46935 0.00021625 -1.0308 -0.00047493 -0.56144 -0.00025868 460.740867554099 47.087 0.34784 47.087 46.827 47.175 0 11 6 2 0 0 0 0.03103 1 45828 87.754 48.536 1 19868000 1776 630 1637 1661 2086 2086 70 ALMDLLQLTR 10 Unmodified _ALMDLLQLTR_ 0 0 0 Q14807 Q14807 Q14807 KIF22 Kinesin-like protein KIF22 MULTI-MSMS 210214_Eclipse_Hela_QC 587.336975097656 2 587.336641 1172.65873 1.1353 0.00066679 0.067727 3.9778E-05 1.203 0.00070657 587.336724242321 103.38 0.49721 103.38 103.04 103.53 0 16 9 2 0 0 0 0.028646 1 124219 41.448 20.928 1 929140 1777 2114 1638 1662 2087 2087 ALMDSLGPEWR 11 Unmodified _ALMDSLGPEWR_ 0 0 0 Q15785 Q15785 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 MULTI-MSMS 210214_Eclipse_Hela_QC 638.315673828125 2 637.81353 1273.61251 0.69177 0.00044122 -0.64362 -0.00041051 0.048154 3.0713E-05 637.813586810252 78.139 0.89565 78.139 77.871 78.766 0 46 17 4 0 0 0 0.00073892 1 89168 73.985 54.891 1 18132000 1778 2214 1639 1663 2088 2088 ALMGLYHGQVLCK 13 Unmodified _ALMGLYHGQVLCK_ 0 0 0 P40939 P40939 P40939 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 210214_Eclipse_Hela_QC 497.594299316406 3 497.259985 1488.75813 0.7589 0.00037737 -0.27859 -0.00013853 0.48032 0.00023884 497.259857786894 53.623 0.9462 53.623 53.242 54.188 0 41 18 3 0 0 0 6.2753E-05 1 54878 89.403 75.146 1 20340000 1779 1251 1640 1664 2089 2089 ALMGLYHGQVLCK 13 Unmodified _ALMGLYHGQVLCK_ 0 0 0 P40939 P40939 P40939 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase MULTI-MSMS 210214_Eclipse_Hela_QC 745.386352539062 2 745.386339 1488.75813 1.3386 0.00099776 -0.98768 -0.0007362 0.3509 0.00026155 745.3853452633 53.665 0.64765 53.665 53.192 53.839 0 20 12 2 0 0 0 0.000136 1 54932 85.731 63.645 1 4789000 1780 1251 1640 1664 2090 2090 ALMLQGVDLLADAVAVTMGPK 21 Oxidation (M) _ALMLQGVDLLADAVAVTM(Oxidation (M))GPK_ ALMLQGVDLLADAVAVTM(1)GPK ALM(-130)LQGVDLLADAVAVTM(130)GPK 0 1 0 P10809 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1065.57678222656 2 1065.07088 2128.1272 1.6161 0.0017212 0.51774 0.00055143 2.1338 0.0022727 1065.57301773548 109.48 0.39892 109.48 109.3 109.7 0 18 7 3 0 0 0 5.5613E-20 1 132686 141 126.32 2 48797000 1781 813 1641 1665 2091 2091 180;181 ALMLQGVDLLADAVAVTMGPK 21 Oxidation (M) _ALM(Oxidation (M))LQGVDLLADAVAVTMGPK_ ALM(1)LQGVDLLADAVAVTMGPK ALM(150)LQGVDLLADAVAVTM(-150)GPK 0 1 0 P10809 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1065.57702636719 2 1065.07088 2128.1272 1.4558 0.0015505 -0.30115 -0.00032075 1.1546 0.0012298 1065.5719558377 110.22 0.49857 110.22 110.05 110.55 0 20 9 3 0 0 0 5.107E-28 2 133714 157.23 122.23 2 32293000 1782 813 1641 1665 2092;2093 2093 180;181 ALMLQGVDLLADAVAVTMGPK 21 Oxidation (M) _ALM(Oxidation (M))LQGVDLLADAVAVTMGPK_ ALM(1)LQGVDLLADAVAVTMGPK ALM(34)LQGVDLLADAVAVTM(-34)GPK 0 1 0 P10809 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1065.57348632812 2 1065.07088 2128.1272 1.6707 0.0017794 -0.32578 -0.00034698 1.3449 0.0014324 1065.07083561783 111.42 0.34887 111.42 111.3 111.64 0 22 6 5 0 0 0 1.531E-06 1 135404 91.441 77.724 2 8435400 1783 813 1641 1665 2094 2094 180;181 ALMLQGVDLLADAVAVTMGPK 21 Unmodified _ALMLQGVDLLADAVAVTMGPK_ 0 0 0 P10809 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1057.51354980469 2 1057.07342 2112.13228 1.7064 0.0018038 -0.87335 -0.00092319 0.83305 0.0008806 1057.57410623318 111.42 0.69733 111.42 111.25 111.94 0 61 13 7 0 0 0 9.2857E-79 2 135328 227.41 227.41 1 214900000 1784 813 1641 1666 2095;2096 2095 ALMLQGVDLLADAVAVTMGPK 21 Unmodified _ALMLQGVDLLADAVAVTMGPK_ 0 0 0 P10809 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 705.386413574219 3 705.051371 2112.13228 1.7783 0.0012538 -0.81142 -0.00057209 0.96685 0.00068168 705.051010931788 111.43 0.39862 111.43 111.25 111.64 0 25 7 5 0 0 0 4.6518E-29 1 135363 126.22 122.5 1 16538000 1785 813 1641 1666 2097 2097 ALMQVVDFLSR 11 Unmodified _ALMQVVDFLSR_ 0 0 0 Q9GZT8 Q9GZT8 Q9GZT8 NIF3L1 NIF3-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 639.84765625 2 639.847373 1277.68019 1.0894 0.00069707 -0.87173 -0.00055777 0.2177 0.00013929 639.846813838543 100.67 0.54668 100.67 100.3 100.85 0 23 10 3 0 0 0 0.019491 1 120359 43.512 30.475 1 2986500 1786 3396 1642 1667 2098 2098 ALNALCDGLIDELNQALK 18 Unmodified _ALNALCDGLIDELNQALK_ 0 0 0 P30084 P30084 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 986.517700195312 2 986.014415 1970.01428 1.3495 0.0013306 -0.12958 -0.00012777 1.2199 0.0012029 986.516421206099 107.78 0.79726 107.78 107.46 108.26 0 45 15 6 0 0 0 1.597E-66 1 130291 218.85 180.45 1 115490000 1787 1117 1643 1668 2099 2099 ALNEALK 7 Unmodified _ALNEALK_ 0 0 0 P49588 P49588 P49588 AARS Alanine--tRNA ligase, cytoplasmic MULTI-MSMS 210214_Eclipse_Hela_QC 379.724151611328 2 379.723978 757.433404 -0.10173 -3.8631E-05 0.38265 0.0001453 0.28092 0.00010667 379.724093317553 22.99 0.39858 22.99 22.803 23.201 0 16 7 3 0 0 0 0.0073468 1 11374 85.357 18.363 1 35584000 1788 1377 1644 1669 2100 2100 ALNEVFIGESLSSR 14 Unmodified _ALNEVFIGESLSSR_ 0 0 0 Q4G0N4 Q4G0N4 Q4G0N4 NADK2 NAD kinase 2, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 761.398742675781 2 761.399012 1520.78347 0.73641 0.0005607 -0.5831 -0.00044398 0.1533 0.00011672 761.39859647548 77.006 0.54768 77.006 76.726 77.274 0 24 10 3 0 0 0 1.7413E-06 1 87717 106.49 82.505 1 6492500 1789 2286 1645 1670 2101 2101 ALNHEIEELEK 11 Unmodified _ALNHEIEELEK_ 0 0 0 O95347 O95347 O95347 SMC2 Structural maintenance of chromosomes protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 442.229705810547 3 442.229625 1323.66705 0.087446 3.8671E-05 -0.30845 -0.0001364 -0.221 -9.7733E-05 442.229486891735 38.904 0.54408 38.904 38.539 39.083 0 29 10 3 0 0 0 0.00098407 1 33867 53.448 47.984 1 14902000 1790 560 1646 1671 2102 2102 ALNHEIEELEK 11 Unmodified _ALNHEIEELEK_ 0 0 0 O95347 O95347 O95347 SMC2 Structural maintenance of chromosomes protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 662.841552734375 2 662.840799 1323.66705 0.50445 0.00033437 0.49944 0.00033105 1.0039 0.00066542 662.841049780437 38.799 0.7262 38.799 38.539 39.265 0 29 14 3 0 0 0 3.6926E-05 1 33938 104.82 69.379 1 5980400 1791 560 1646 1671 2103 2103 ALNILQSTNMAFGK 14 Unmodified _ALNILQSTNMAFGK_ 0 0 0 P40937 P40937 P40937 RFC5 Replication factor C subunit 5 MULTI-MSMS 210214_Eclipse_Hela_QC 754.40185546875 2 754.400501 1506.78645 1.1297 0.00085222 -0.28373 -0.00021405 0.84594 0.00063818 754.400331504156 83.778 0.54738 83.778 83.454 84.002 0 27 10 3 0 0 0 0.0022295 1 96965 66.595 46.989 1 11519000 1792 1249 1647 1672 2104 2104 ALNLAYSSIYGSYR 14 Unmodified _ALNLAYSSIYGSYR_ 0 0 0 Q7L576 Q7L576 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 789.904724121094 2 789.401555 1576.78856 0.85355 0.00067379 -0.15474 -0.00012215 0.69881 0.00055164 789.401301080194 76.879 0.49814 76.879 76.627 77.125 0 20 9 3 0 0 0 0.00067186 1 87655 62.408 52.403 1 3601100 1793 2518 1648 1673 2105 2105 ALNLFQGSVEDTTGSQSLAALLNK 24 Unmodified _ALNLFQGSVEDTTGSQSLAALLNK_ 0 0 0 P43246 P43246 P43246 MSH2 DNA mismatch repair protein Msh2 MULTI-MSMS 210214_Eclipse_Hela_QC 1239.65246582031 2 1239.14774 2476.28093 2.661 0.0032974 -0.15256 -0.00018904 2.5084 0.0031083 1239.64922977287 106.66 0.29111 106.66 106.57 106.86 0 19 5 5 0 0 0 2.1574E-32 2 128852 151.72 126 1 49349000 1794 1289 1649 1674 2106;2107 2107 ALNMAIPGGPK 11 Unmodified _ALNMAIPGGPK_ 0 0 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 210214_Eclipse_Hela_QC 534.797729492188 2 534.797152 1067.57975 0.62055 0.00033187 0.27174 0.00014532 0.89229 0.00047719 534.797307649847 52.87 0.59841 52.87 52.543 53.142 0 30 11 4 0 0 0 0.001507 1 53827 66.692 41.769 1 11835000 1795 2450 1650 1675 2108 2108 ALNQEQVIAVHIDNGFMR 18 Unmodified _ALNQEQVIAVHIDNGFMR_ 0 0 0 P49915 P49915 P49915 GMPS GMP synthase [glutamine-hydrolyzing] MULTI-MSMS 210214_Eclipse_Hela_QC 685.687194824219 3 685.686191 2054.03674 0.75599 0.00051837 0.10695 7.3331E-05 0.86293 0.0005917 686.020458378577 78.094 0.89662 78.094 77.572 78.468 0 62 17 5 0 0 0 2.2793E-05 1 89156 81.317 72.386 1 25586000 1796 1404 1651 1676 2109 2109 ALNRPPTYPTK 11 Unmodified _ALNRPPTYPTK_ 0 0 1 P55010 P55010 P55010 EIF5 Eukaryotic translation initiation factor 5 MULTI-MSMS 210214_Eclipse_Hela_QC 629.351989746094 2 629.351137 1256.68772 0.59542 0.00037473 0.010722 6.7477E-06 0.60614 0.00038147 629.351243522058 23.069 0.54824 23.069 22.753 23.301 0 24 10 4 0 0 0 0.00039666 1 11403 109.29 72.099 1 15410000 1797 1525 1652 1677 2110 2110 ALNRPPTYPTK 11 Unmodified _ALNRPPTYPTK_ 0 0 1 P55010 P55010 P55010 EIF5 Eukaryotic translation initiation factor 5 MULTI-MSMS 210214_Eclipse_Hela_QC 419.902954101562 3 419.903183 1256.68772 0.2038 8.5578E-05 0.43695 0.00018348 0.64075 0.00026905 419.903326568308 23.042 0.69768 23.042 22.703 23.401 0 32 13 3 0 0 0 0.034996 1 11450 29.55 10.418 1 14988000 1798 1525 1652 1677 2111 2111 ALNSAANNVYQYGR 14 Unmodified _ALNSAANNVYQYGR_ 0 0 0 Q9H330 Q9H330 Q9H330 TMEM245 Transmembrane protein 245 MULTI-MSMS 210214_Eclipse_Hela_QC 771.382202148438 2 770.878778 1539.743 1.01 0.00077857 -0.70165 -0.00054089 0.30833 0.00023769 770.878140735662 42.878 0.54765 42.878 42.647 43.194 0 21 10 3 0 0 0 0.00013492 1 39772 98.048 91.515 1 4837900 1799 3451 1653 1678 2112 2112 ALNVEPDGTGLTCSLAPNIISQL 23 Unmodified _ALNVEPDGTGLTCSLAPNIISQL_ 0 0 0 P30044 P30044 P30044 PRDX5 Peroxiredoxin-5, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1192.61608886719 2 1192.11231 2382.21008 1.9132 0.0022807 -0.89039 -0.0010614 1.0228 0.0012193 1192.61253894823 109.92 0.59846 109.92 109.75 110.35 0 49 11 7 0 0 0 1.9154E-17 1 133304 123.72 115.74 1 334310000 1800 1111 1654 1679 2113 2113 ALNVEPDGTGLTCSLAPNIISQL 23 Unmodified _ALNVEPDGTGLTCSLAPNIISQL_ 0 0 0 P30044 P30044 P30044 PRDX5 Peroxiredoxin-5, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1192.61633300781 2 1192.11231 2382.21008 2.2586 0.0026925 -1.6358 -0.0019501 0.62279 0.00074244 1192.61223294631 110.53 0.39903 110.53 110.3 110.7 0 22 7 5 0 0 0 0.055121 1 134132 22.606 9.4692 1 6669400 1801 1111 1654 1679 2114 2114 ALPASETPK 9 Unmodified _ALPASETPK_ 0 0 0 O76021 O76021 O76021 RSL1D1 Ribosomal L1 domain-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 457.252807617188 2 457.2531 912.491647 0.068075 3.1128E-05 -0.45719 -0.00020905 -0.38912 -0.00017793 457.253033419342 20.986 0.64756 20.986 20.663 21.31 0 26 12 3 0 0 0 0.0060532 1 8394 62.546 17.152 1 42605000 1802 506 1655 1680 2115 2115 ALPAVQQNNLDEDLIR 16 Unmodified _ALPAVQQNNLDEDLIR_ 0 0 0 P22314 P22314 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 MULTI-MSMS 210214_Eclipse_Hela_QC 905.480224609375 2 904.978689 1807.94283 1.5303 0.0013849 -0.18869 -0.00017076 1.3417 0.0012142 904.978463415339 75.527 0.77655 75.527 75.253 76.029 0 65 15 6 0 0 0 6.2163E-82 1 85510 258.92 238.49 1 168460000 1803 1009 1656 1681 2116 2116 ALPAVQQNNLDEDLIRK 17 Unmodified _ALPAVQQNNLDEDLIRK_ 0 0 1 P22314 P22314 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 MULTI-MSMS 210214_Eclipse_Hela_QC 969.028259277344 2 969.026171 1936.03779 1.7654 0.0017107 0.26758 0.00025929 2.0329 0.00197 969.02638034169 60.688 0.44775 60.688 60.398 60.846 0 17 8 3 0 0 0 0.00010902 1 64902 87.363 78.634 1 2589700 1804 1009 1657 1682 2117 2117 ALPCIVDVR 9 Unmodified _ALPCIVDVR_ 0 0 0 Q6YN16 Q6YN16 Q6YN16 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 521.789306640625 2 521.789327 1041.5641 0.27795 0.00014503 -0.059782 -3.1193E-05 0.21817 0.00011384 521.789288250692 62.951 0.74572 62.951 62.528 63.274 0 37 14 4 0 0 0 0.0086208 1 67932 55.872 40.721 1 19635000 1805 2492 1658 1683 2118 2118 ALPCIVDVRDEQQISAAVEK 20 Unmodified _ALPCIVDVRDEQQISAAVEK_ 0 0 1 Q6YN16 Q6YN16 Q6YN16 HSDL2 Hydroxysteroid dehydrogenase-like protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 748.058654785156 3 747.72297 2240.14708 1.2217 0.00091346 -0.10946 -8.1849E-05 1.1122 0.00083161 748.057196833051 77.895 0.44838 77.895 77.622 78.07 0 14 8 2 0 0 0 0.0036296 1 88897 38.453 34.859 1 5517800 1806 2492 1659 1684 2119 2119 ALPDMEVVGLNFSSATTPELLLK 23 Unmodified _ALPDMEVVGLNFSSATTPELLLK_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1223.6552734375 2 1223.15091 2444.28726 1.4353 0.0017556 0.84388 0.0010322 2.2792 0.0027878 1223.65367660936 108.48 0.34781 108.48 108.36 108.7 0 19 6 5 0 0 0 2.4029E-06 1 131376 70.784 66.153 1 25650000 1807 2070 1660 1685 2120 2120 ALPEFFNGK 9 Unmodified _ALPEFFNGK_ 0 0 0 Q8TAQ2;Q92922 Q8TAQ2;Q92922 Q8TAQ2 SMARCC2;SMARCC1 SWI/SNF complex subunit SMARCC2;SWI/SNF complex subunit SMARCC1 MULTI-MSMS 210214_Eclipse_Hela_QC 511.768157958984 2 511.768917 1021.52328 0.14157 7.245E-05 0.11822 6.0502E-05 0.25979 0.00013295 511.768764053792 62.348 0.88893 62.348 62.087 62.976 0 28 17 3 0 0 0 0.0056942 1 67244 63.48 42.925 1 7641700 1808 2786;2923 1661 1686 2121 2121 ALPFWNEEIVPQIK 14 Unmodified _ALPFWNEEIVPQIK_ 0 0 0 P18669;P15259;Q8N0Y7 P18669 P18669 PGAM1;PGAM2;PGAM4 Phosphoglycerate mutase 1;Phosphoglycerate mutase 2;Probable phosphoglycerate mutase 4 MULTI-MSMS 210214_Eclipse_Hela_QC 842.960632324219 2 842.458873 1682.90319 1.3874 0.0011688 -0.68925 -0.00058067 0.69811 0.00058813 842.959683541387 105.25 1.0467 105.25 105.03 106.07 0 71 20 5 0 0 0 4.5378E-30 1 126781 183 166.38 1 1473500000 1809 956 1662 1687 2122 2122 ALPGMGTTIDVILINGR 17 Unmodified _ALPGMGTTIDVILINGR_ 0 0 0 O60841 O60841 O60841 EIF5B Eukaryotic translation initiation factor 5B MULTI-MSMS 210214_Eclipse_Hela_QC 871.489929199219 2 870.987472 1739.96039 1.0173 0.00088609 0.41497 0.00036144 1.4323 0.0012475 871.488839939669 105.65 0.29903 105.65 105.48 105.77 0 12 5 3 0 0 0 5.0648E-05 1 127447 84.718 70.56 1 8259100 1810 401 1663 1688 2123 2123 ALPLEAEVAPVK 12 Unmodified _ALPLEAEVAPVK_ 0 0 0 P27816 P27816 P27816 MAP4 Microtubule-associated protein 4 MULTI-MSMS 210214_Eclipse_Hela_QC 618.864074707031 2 618.863546 1235.71254 1.0256 0.00063472 0.093994 5.8169E-05 1.1196 0.00069289 618.863529702444 65.402 0.69727 65.402 65.104 65.801 0 46 13 5 0 0 0 0.0024597 1 71342 54.539 34.21 1 33188000 1811 1079 1664 1689 2124 2124 ALPLIVGAQLIHADK 15 Unmodified _ALPLIVGAQLIHADK_ 0 0 0 Q5SSJ5 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 520.315856933594 3 520.315364 1557.92426 0.99477 0.00051759 -0.059733 -3.108E-05 0.93504 0.00048651 520.315297048216 83.695 0.79621 83.695 83.306 84.102 0 49 15 4 0 0 0 0.00032416 1 96720 58.079 50.534 1 19921000 1812 2342 1665 1690 2125 2125 ALPLIVGAQLIHADK 15 Unmodified _ALPLIVGAQLIHADK_ 0 0 0 Q5SSJ5 Q5SSJ5 Q5SSJ5 HP1BP3 Heterochromatin protein 1-binding protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 779.971374511719 2 779.969408 1557.92426 1.689 0.0013173 0.017143 1.3371E-05 1.7061 0.0013307 779.969353751131 83.579 0.64693 83.579 83.355 84.002 0 29 12 3 0 0 0 0.0053412 1 96808 48.004 41.314 1 5683300 1813 2342 1665 1690 2126 2126 ALPLPHFDTINLPEK 15 Unmodified _ALPLPHFDTINLPEK_ 0 0 0 Q9ULW0 Q9ULW0 Q9ULW0 TPX2 Targeting protein for Xklp2 MULTI-MSMS 210214_Eclipse_Hela_QC 568.982299804688 3 568.982162 1703.92466 0.60921 0.00034663 -0.35371 -0.00020126 0.2555 0.00014537 568.981777002916 85.459 0.89407 85.459 84.997 85.891 0 41 17 4 0 0 0 0.043953 1 99385 23.138 3.8144 1 2958900 1814 3937 1666 1691 2127 2127 ALPQLSDDIPFR 12 Unmodified _ALPQLSDDIPFR_ 0 0 0 Q96DZ1 Q96DZ1 Q96DZ1 ERLEC1 Endoplasmic reticulum lectin 1 MULTI-MSMS 210214_Eclipse_Hela_QC 686.367919921875 2 686.366984 1370.71942 0.89938 0.0006173 0.25078 0.00017212 1.1502 0.00078943 686.367320624743 86.942 0.54666 86.942 86.637 87.184 0 22 10 3 0 0 0 0.0024506 1 101541 54.608 44.376 1 2692000 1815 3005 1667 1692 2128 2128 ALPSQGLSSSAVLEK 15 Unmodified _ALPSQGLSSSAVLEK_ 0 0 0 O95470 O95470 O95470 SGPL1 Sphingosine-1-phosphate lyase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 743.909362792969 2 743.909213 1485.80387 0.85933 0.00063927 -0.22578 -0.00016796 0.63356 0.00047131 743.909252484638 54.814 0.49757 54.814 54.526 55.023 0 24 9 4 0 0 0 0.00013679 1 56523 77.593 63.099 1 6912100 1816 574 1668 1693 2129 2129 ALQAAIQQLAEAQPEATAK 19 Unmodified _ALQAAIQQLAEAQPEATAK_ 0 0 0 Q92616 Q92616 Q92616 GCN1L1 Translational activator GCN1 MULTI-MSMS 210214_Eclipse_Hela_QC 977.027038574219 2 976.526004 1951.03745 0.6647 0.00064909 0.18995 0.00018549 0.85464 0.00083458 977.027440278725 76.861 0.74656 76.861 76.577 77.323 0 41 14 4 0 0 0 1.754E-18 1 87443 134.61 126.51 1 16916000 1817 2894 1669 1694 2130 2130 ALQAAYGASAPSVTSAALR 19 Unmodified _ALQAAYGASAPSVTSAALR_ 0 0 0 O43488 O43488 O43488 AKR7A2 Aflatoxin B1 aldehyde reductase member 2 MULTI-MSMS 210214_Eclipse_Hela_QC 902.982177734375 2 902.981232 1803.94791 1.1022 0.00099526 0.36489 0.00032949 1.4671 0.0013247 902.981567615406 63.397 0.5973 63.397 63.075 63.672 0 46 11 5 0 0 0 9.5981E-07 1 68509 99.531 85.868 1 22383000 1818 309 1670 1695 2131 2131 ALQALEELR 9 Unmodified _ALQALEELR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 521.799011230469 2 521.798206 1041.58186 0.63417 0.00033091 0.026361 1.3755E-05 0.66053 0.00034467 521.798185108491 57.287 0.99466 57.287 56.617 57.611 0 37 19 2 0 0 0 5.5027E-05 1 60254 119.27 60.069 1 20070000 1819 2158 1671 1696 2132 2132 ALQALQQEHK 10 Unmodified _ALQALQQEHK_ 0 0 0 Q9BRG1 Q9BRG1 Q9BRG1 VPS25 Vacuolar protein-sorting-associated protein 25 MULTI-MSMS 210214_Eclipse_Hela_QC 583.319763183594 2 583.319837 1164.62512 0.1147 6.6907E-05 -1.1129 -0.00064916 -0.99817 -0.00058225 583.320011345464 20.09 0.34746 20.09 19.917 20.264 0 11 6 2 0 0 0 0.00011333 1 7229 107.69 77.527 1 8812100 1820 3234 1672 1697 2133 2133 ALQAQEIECR 10 Unmodified _ALQAQEIECR_ 0 0 0 Q8NBJ5 Q8NBJ5 Q8NBJ5 COLGALT1 Procollagen galactosyltransferase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 609.30078125 2 609.300787 1216.58702 0.38307 0.0002334 0.38685 0.00023571 0.76992 0.00046911 609.301126281774 29.397 0.89474 29.397 29.032 29.926 0 46 17 4 0 0 0 2.9334E-09 1 20365 179.68 156.25 1 40270000 1821 2727 1673 1698 2134 2134 ALQASALK 8 Unmodified _ALQASALK_ 0 0 0 P04075 P04075 P04075 ALDOA Fructose-bisphosphate aldolase A MULTI-MSMS 210214_Eclipse_Hela_QC 401.245269775391 2 401.245078 800.475603 0.034973 1.4033E-05 -0.034079 -1.3674E-05 0.00089388 3.5866E-07 401.245052788704 23.526 1.3671 23.526 23.102 24.469 0 63 27 5 0 0 0 0.0025744 1 12034 101.28 9.384 1 304260000 1822 655 1674 1699 2135 2135 ALQATVGNSYK 11 Unmodified _ALQATVGNSYK_ 0 0 0 P11279 P11279 P11279 LAMP1 Lysosome-associated membrane glycoprotein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 576.307922363281 2 576.306395 1150.59824 0.1719 9.9065E-05 0.81603 0.00047028 0.98793 0.00056935 576.306958556716 27.103 0.7456 27.103 26.856 27.601 0 34 11 4 0 0 0 1.3966E-10 2 17250 136.57 119.33 1 85615000 1823 829 1675 1700 2136;2137 2137 ALQDEWDAVMLHSFTLR 17 Unmodified _ALQDEWDAVMLHSFTLR_ 0 0 0 Q9UMS4 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 MULTI-MSMS 210214_Eclipse_Hela_QC 678.338195800781 3 678.003408 2030.9884 1.3 0.00088141 -0.098235 -6.6603E-05 1.2018 0.0008148 678.003498807685 105.85 0.29928 105.85 105.67 105.97 0 16 5 4 0 0 0 4.3054E-12 1 127712 104.93 95.888 1 47549000 1824 3946 1676 1701 2138 2138 ALQDLENAASGDAAVHQR 18 Unmodified _ALQDLENAASGDAAVHQR_ 0 0 0 Q96P16 Q96P16 Q96P16 RPRD1A Regulation of nuclear pre-mRNA domain-containing protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 622.975219726562 3 622.641527 1864.90275 0.46533 0.00028973 -0.010243 -6.3777E-06 0.45508 0.00028335 622.641638290964 47.909 0.54734 47.909 47.573 48.12 0 34 10 4 0 0 0 7.2852E-06 1 46770 79.013 74.487 1 11934000 1825 3107 1677 1702 2139 2139 ALQDLENAASGDATVR 16 Unmodified _ALQDLENAASGDATVR_ 0 0 0 Q9NQG5 Q9NQG5 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B MULTI-MSMS 210214_Eclipse_Hela_QC 816.407409667969 2 815.90519 1629.79583 1.1847 0.00096659 0.2862 0.00023351 1.4709 0.0012001 815.905452759499 59.526 0.69585 59.526 59.204 59.9 0 37 13 4 0 0 0 3.1698E-11 2 63107 126.76 93.575 1 22529000 1826 3598 1678 1703 2140;2141 2140 ALQDLQLDQGNQK 13 Unmodified _ALQDLQLDQGNQK_ 0 0 0 Q9NQ48 Q9NQ48 Q9NQ48 LZTFL1 Leucine zipper transcription factor-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 735.8818359375 2 735.880987 1469.74742 0.56354 0.0004147 -0.043234 -3.1815E-05 0.52031 0.00038289 735.880996338711 45.707 0.4976 45.707 45.433 45.931 0 16 9 2 0 0 0 0.0018887 1 43699 68.657 53.967 1 4995000 1827 3592 1679 1704 2142 2142 ALQDMSSTAPPAPQPSTR 18 Unmodified _ALQDMSSTAPPAPQPSTR_ 0 0 0 O15357 O15357 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 928.456115722656 2 927.954357 1853.89416 0.90946 0.00084393 -0.42156 -0.00039119 0.48789 0.00045274 927.954298412136 45.843 0.44817 45.843 45.632 46.08 0 19 8 3 0 0 0 5.4061E-05 1 43948 80.522 69.617 1 4668100 1828 265 1680 1705 2143 2143 ALQEFDLALR 10 Unmodified _ALQEFDLALR_ 0 0 0 Q96GQ7 Q96GQ7 Q96GQ7 DDX27 Probable ATP-dependent RNA helicase DDX27 MULTI-MSMS 210214_Eclipse_Hela_QC 588.324768066406 2 588.324588 1174.63462 0.99335 0.00058441 0.66627 0.00039199 1.6596 0.0009764 588.325048537918 77.298 1.1945 77.298 76.876 78.07 0 41 23 2 0 0 0 0.00017666 1 87854 101.54 49.755 1 11416000 1829 3047 1681 1706 2144 2144 ALQEGAEIVVCTPGR 15 Unmodified _ALQEGAEIVVCTPGR_ 0 0 0 Q86XP3 Q86XP3 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 MULTI-MSMS 210214_Eclipse_Hela_QC 800.413269042969 2 800.411597 1598.80864 1.5162 0.0012136 0.10269 8.2195E-05 1.6189 0.0012958 800.411797079563 58.333 0.79618 58.333 57.711 58.507 0 23 15 2 0 0 0 2.8241E-05 1 61595 95.018 87.739 1 11520000 1830 2603 1682 1707 2145 2145 ALQEGEGDLSISADR 15 Unmodified _ALQEGEGDLSISADR_ 0 0 0 P49589 P49589 P49589 CARS Cysteine--tRNA ligase, cytoplasmic MULTI-MSMS 210214_Eclipse_Hela_QC 780.880187988281 2 780.878641 1559.74273 1.45 0.0011323 -0.10618 -8.2915E-05 1.3438 0.0010494 780.87864535744 50.357 0.69701 50.357 50.03 50.727 0 39 13 4 0 0 0 3.791E-22 1 50231 151.98 140.88 1 22715000 1831 1378 1683 1708 2146 2146 ALQEWLLK 8 Unmodified _ALQEWLLK_ 0 0 0 Q9GZR2 Q9GZR2 Q9GZR2 REXO4 RNA exonuclease 4 MULTI-MSMS 210214_Eclipse_Hela_QC 500.794769287109 2 500.794935 999.575317 0.68976 0.00034543 -0.0081865 -4.0998E-06 0.68158 0.00034133 500.794841033262 71.243 0.64813 71.243 70.969 71.617 0 25 12 3 0 0 0 0.010814 1 79675 65.803 38.487 1 4292600 1832 3391 1684 1709 2147 2147 ALQFLEEVK 9 Unmodified _ALQFLEEVK_ 0 0 0 P40227 P40227 P40227 CCT6A T-complex protein 1 subunit zeta MULTI-MSMS 210214_Eclipse_Hela_QC 538.803466796875 2 538.802957 1075.59136 0.85014 0.00045806 -0.13681 -7.3714E-05 0.71333 0.00038434 538.802839685963 68.281 0.84467 68.281 67.959 68.803 0 55 16 5 0 0 0 2.7133E-05 1 75404 128.69 93.879 1 78133000 1833 1239 1685 1710 2148 2148 ALQGASQIIAEIR 13 Unmodified _ALQGASQIIAEIR_ 0 0 0 O00429 O00429 O00429 DNM1L Dynamin-1-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 685.394836425781 2 685.393533 1368.77251 0.60895 0.00041737 0.29923 0.00020509 0.90818 0.00062246 685.393858012234 76.886 0.64751 76.886 76.577 77.224 0 35 12 4 0 0 0 2.5127E-06 1 87392 113.69 70.604 1 17501000 1834 159 1686 1711 2149 2149 ALQGISGLK 9 Unmodified _ALQGISGLK_ 0 0 0 O15269 O15269 O15269 SPTLC1 Serine palmitoyltransferase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 443.771667480469 2 443.77146 885.528367 -0.097262 -4.3162E-05 0.1397 6.1996E-05 0.04244 1.8834E-05 443.771597901838 37.754 0.54688 37.754 37.447 37.994 0 17 10 2 0 0 0 0.0027674 1 32421 73.248 12.488 1 4267400 1835 257 1687 1712 2150 2150 ALQIPEVYLR 10 Unmodified _ALQIPEVYLR_ 0 0 0 Q14C86 Q14C86 Q14C86 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 601.352294921875 2 601.350606 1200.68666 1.2285 0.00073877 0.4605 0.00027692 1.689 0.0010157 601.35124729097 81.532 1.0439 81.532 80.854 81.898 0 49 17 4 0 0 0 0.0039955 1 93808 61.962 45.76 1 13734000 1836 2124 1688 1713 2151 2151 ALQLLDEVLHTMPIADPQPLD 21 Unmodified _ALQLLDEVLHTMPIADPQPLD_ 0 0 0 Q13485 Q13485 Q13485 SMAD4 Mothers against decapentaplegic homolog 4 MULTI-MSMS 210214_Eclipse_Hela_QC 1165.61157226562 2 1165.10904 2328.20353 1.6144 0.0018809 -0.083422 -9.7196E-05 1.5309 0.0017837 1165.61069673348 110.32 0.29871 110.32 110.2 110.5 0 12 5 3 0 0 0 1.3686E-09 1 133853 107.35 100.47 1 9941300 1837 1996 1689 1714 2152 2152 ALQLLQMYYEGR 12 Unmodified _ALQLLQMYYEGR_ 0 0 0 Q9H0A0 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 210214_Eclipse_Hela_QC 742.883605957031 2 742.881944 1483.74933 1.4669 0.0010897 -1.201 -0.0008922 0.26592 0.00019755 742.882061156279 89.188 0.84505 89.188 88.815 89.66 0 28 16 2 0 0 0 6.7107E-09 1 104508 132.78 110.14 1 8672200 1838 3406 1690 1715 2153 2153 ALQLSEPGK 9 Unmodified _ALQLSEPGK_ 0 0 0 Q9H061 Q9H061 Q9H061 TMEM126A Transmembrane protein 126A MULTI-MSMS 210214_Eclipse_Hela_QC 471.767578125 2 471.766374 941.518196 0.58179 0.00027447 0.22172 0.0001046 0.80351 0.00037907 471.766445659363 30.73 0.49907 30.73 30.424 30.923 0 17 9 2 0 0 0 0.00083552 1 22369 86.833 47.17 1 7225500 1839 3401 1691 1716 2154 2154 ALQNAVTTFVNR 12 Unmodified _ALQNAVTTFVNR_ 0 0 0 O14964 O14964 O14964 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate MULTI-MSMS 210214_Eclipse_Hela_QC 667.868041992188 2 667.364776 1332.715 0.85377 0.00056978 -0.034005 -2.2694E-05 0.81976 0.00054708 667.364535045003 60.174 0.49833 60.174 59.9 60.398 0 17 9 2 0 0 0 0.046181 1 64112 33.875 13.546 1 9116100 1840 223 1692 1717 2155 2155 ALQQEQEIEQR 11 Unmodified _ALQQEQEIEQR_ 0 0 0 Q86YP4;Q8WXI9 Q86YP4;Q8WXI9 Q8WXI9 GATAD2A;GATAD2B Transcriptional repressor p66-alpha;Transcriptional repressor p66-beta MULTI-MSMS 210214_Eclipse_Hela_QC 686.34765625 2 686.34678 1370.67901 0.21319 0.00014632 -0.1636 -0.00011228 0.049592 3.4038E-05 686.346854296144 26.133 0.29907 26.133 25.959 26.258 0 16 5 4 0 0 0 5.4314E-13 1 15865 153.24 131.87 1 13118000 1841 2864;2609 1693 1718 2156 2156 ALQQGLVGLELK 12 Unmodified _ALQQGLVGLELK_ 0 0 0 P58107 P58107 P58107 EPPK1 Epiplakin MULTI-MSMS 210214_Eclipse_Hela_QC 634.882202148438 2 634.88227 1267.74999 0.77955 0.00049492 -5.4769E-05 -3.4772E-08 0.7795 0.00049489 634.882232981978 73.085 0.44872 73.085 72.911 73.36 0 14 8 2 0 0 0 0.01409 1 82342 44.318 22.232 1 3210600 1842 1569 1694 1719 2157 2157 ALQQHLCVVQLTR 13 Unmodified _ALQQHLCVVQLTR_ 0 0 0 Q14CX7 Q14CX7 Q14CX7 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit MULTI-MSMS 210214_Eclipse_Hela_QC 522.624694824219 3 522.624203 1564.85078 0.35121 0.00018355 0.18966 9.912E-05 0.54086 0.00028267 522.958603082751 49.904 0.59412 49.904 49.635 50.229 0 23 11 3 0 0 0 0.0070706 1 49604 40.025 30.975 1 5611300 1843 2125 1695 1720 2158 2158 ALQQLLFPGK 10 Unmodified _ALQQLLFPGK_ 0 0 0 Q8WUX1 Q8WUX1 Q8WUX1 SLC38A5 Sodium-coupled neutral amino acid transporter 5 MULTI-MSMS 210214_Eclipse_Hela_QC 557.835693359375 2 557.834591 1113.65463 0.99504 0.00055507 0.45989 0.00025654 1.4549 0.00081161 557.834755073608 74.303 0.94621 74.303 73.808 74.754 0 48 18 4 0 0 0 0.00017548 1 83619 101.6 83.198 1 17250000 1844 2833 1696 1721 2159 2159 ALQQVIQDYTTPPNEELSR 19 Unmodified _ALQQVIQDYTTPPNEELSR_ 0 0 0 Q9UI10 Q9UI10 Q9UI10 EIF2B4 Translation initiation factor eIF-2B subunit delta MULTI-MSMS 210214_Eclipse_Hela_QC 1102.05773925781 2 1101.55549 2201.09643 1.3975 0.0015394 -1.1144 -0.0012276 0.2831 0.00031185 1102.05562013826 81.901 0.84444 81.901 81.302 82.147 0 45 16 4 0 0 0 3.2251E-09 1 94302 115.8 103.42 1 4740200 1845 3879 1697 1722 2160 2160 ALQQYTLEPSEK 12 Unmodified _ALQQYTLEPSEK_ 0 0 0 Q9Y678 Q9Y678 Q9Y678 COPG1 Coatomer subunit gamma-1 MULTI-MSMS 210214_Eclipse_Hela_QC 703.864074707031 2 703.861731 1405.70891 0.87241 0.00061405 -0.25565 -0.00017994 0.61676 0.00043411 703.861513013418 44.089 0.64661 44.089 43.792 44.438 0 36 12 4 0 0 0 2.3391E-11 1 41331 137.98 90.373 1 24100000 1846 4138 1698 1723 2161 2161 ALQRPSAAAPQAENGPAAAPAVAAPAATEAPK 32 Unmodified _ALQRPSAAAPQAENGPAAAPAVAAPAATEAPK_ 0 0 1 Q15020 Q15020 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 MULTI-MSMS 210214_Eclipse_Hela_QC 989.858581542969 3 989.187854 2964.54173 1.2433 0.0012298 0.22686 0.00022441 1.4701 0.0014542 989.522588112264 50.354 0.49803 50.354 50.08 50.578 0 40 9 6 0 0 0 3.6267E-05 1 50296 51.323 44.674 1 11270000 1847 2133 1699 1724 2162 2162 ALQSGQCAGAALDVFTEEPPR 21 Unmodified _ALQSGQCAGAALDVFTEEPPR_ 0 0 0 O43175 O43175 O43175 PHGDH D-3-phosphoglycerate dehydrogenase MULTI-MSMS 210214_Eclipse_Hela_QC 1109.53857421875 2 1109.03387 2216.05318 1.2691 0.0014075 -0.095392 -0.00010579 1.1737 0.0013017 1109.53534131847 81.534 1.1927 81.534 81.054 82.246 0 87 22 5 0 0 0 1.1658E-20 2 94487 145.29 131.88 1 22921000 1848 288 1700 1725 2163;2164 2164 ALQSGQCAGAALDVFTEEPPRDR 23 Unmodified _ALQSGQCAGAALDVFTEEPPRDR_ 0 0 1 O43175 O43175 O43175 PHGDH D-3-phosphoglycerate dehydrogenase MULTI-MSMS 210214_Eclipse_Hela_QC 830.406860351562 3 830.067688 2487.18124 1.1068 0.00091874 0.0032609 2.7068E-06 1.1101 0.00092145 830.402174654289 69.153 2.2651 69.153 68.256 70.521 0 194 45 6 0 0 0 4.957E-174 4 77030 301.34 294 1 208050000 1849 288 1701 1726 2165;2166;2167;2168 2167 ALQSPALGLR 10 Unmodified _ALQSPALGLR_ 0 0 0 P46940 P46940 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 210214_Eclipse_Hela_QC 513.309265136719 2 513.308741 1024.60293 0.51207 0.00026285 0.85377 0.00043825 1.3658 0.0007011 513.308811632271 49.067 2.0847 49.067 48.643 50.727 0 87 41 5 0 0 0 1.0199E-09 1 48455 163.99 110.82 1 49736000 1850 1322 1702 1727 2169 2169 ALQSVGQIVGEVLK 14 Unmodified _ALQSVGQIVGEVLK_ 0 0 0 P62333 P62333 P62333 PSMC6 26S protease regulatory subunit 10B MULTI-MSMS 210214_Eclipse_Hela_QC 721.428039550781 2 720.924666 1439.83478 1.2902 0.00093014 0.99464 0.00071706 2.2848 0.0016472 720.924704534544 96.596 1.094 96.596 96.025 97.118 0 67 21 5 0 0 0 1.8469E-14 1 114819 148.28 117.72 1 29665000 1851 1665 1703 1728 2170 2170 ALQSYYEAK 9 Unmodified _ALQSYYEAK_ 0 0 0 Q9BVJ6;Q5TAP6 Q9BVJ6 Q9BVJ6 UTP14A;UTP14C U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C MULTI-MSMS 210214_Eclipse_Hela_QC 536.770202636719 2 536.769114 1071.52368 0.48772 0.00026179 -4.1555 -0.0022305 -3.6677 -0.0019687 536.769239027143 30.131 0.79593 30.131 29.778 30.573 0 33 15 3 0 0 0 0.0010482 1 21725 84.568 37.486 1 11515000 1852 3312 1704 1729 2171 2171 ALQTLQSSWVTFR 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ALQTLQSSWVTFR_ 1 0 0 Q96BW9 Q96BW9 Q96BW9 TAMM41 Phosphatidate cytidylyltransferase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 789.916137695312 2 789.917372 1577.82019 1.2473 0.00098528 -0.23554 -0.00018605 1.0118 0.00079922 789.917545572625 109.12 0.49763 109.12 108.9 109.4 0 16 9 4 0 0 0 4.7986E-09 1 132213 125.74 110.17 1 7096500 1853 2980 1705 1730 2172 2172 ALSAFLTCGNWK 12 Unmodified _ALSAFLTCGNWK_ 0 0 0 O95163 O95163 O95163 IKBKAP Elongator complex protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 684.844787597656 2 684.342455 1366.67036 0.8021 0.00054891 0.93311 0.00063857 1.7352 0.0011875 684.343871692981 78.543 0.69623 78.543 78.17 78.866 0 25 13 3 0 0 0 0.014772 1 90021 43.77 27.88 1 5629700 1854 538 1706 1731 2173 2173 ALSAVHSPTFCQLACGQDGQLK 22 Unmodified _ALSAVHSPTFCQLACGQDGQLK_ 0 0 0 Q8IY67 Q8IY67 Q8IY67 RAVER1 Ribonucleoprotein PTB-binding 1 MULTI-MSMS 210214_Eclipse_Hela_QC 797.053405761719 3 796.719343 2387.1362 0.4622 0.00036824 0.74888 0.00059665 1.2111 0.00096489 797.054298557653 62.168 1.0368 62.168 61.541 62.578 0 66 20 4 0 0 0 0.00077609 1 67304 28.202 25.32 1 27275000 1855 2644 1707 1732 2174 2174 ALSCLGPTHMGPLALGILK 19 Unmodified _ALSCLGPTHMGPLALGILK_ 0 0 0 Q6PJG6 Q6PJG6 Q6PJG6 BRAT1 BRCA1-associated ATM activator 1 MULTI-MSMS 210214_Eclipse_Hela_QC 650.6962890625 3 650.36188 1948.06381 1.328 0.00086365 -0.28854 -0.00018766 1.0394 0.00067599 650.696278364211 91.788 0.54692 91.788 91.449 91.996 0 23 10 3 0 0 0 0.046866 1 108192 18.156 2.5639 1 2736700 1856 2464 1708 1733 2175 2175 ALSDDGVSDLEDPTLTPLK 19 Unmodified _ALSDDGVSDLEDPTLTPLK_ 0 0 0 O60443 O60443 O60443 DFNA5 Non-syndromic hearing impairment protein 5 MULTI-MSMS 210214_Eclipse_Hela_QC 994.002380371094 2 993.499317 1984.98408 1.1222 0.0011149 -0.31437 -0.00031233 0.80785 0.0008026 994.000403890259 89.328 0.54683 89.328 89.063 89.61 0 20 10 3 0 0 0 0.0033807 1 104836 38.366 31.164 1 5874600 1857 367 1709 1734 2176 2176 ALSDHHIYLEGTLLK 15 Unmodified _ALSDHHIYLEGTLLK_ 0 0 0 P04075 P04075 P04075 ALDOA Fructose-bisphosphate aldolase A MULTI-MSMS 210214_Eclipse_Hela_QC 570.980712890625 3 570.64555 1708.91482 0.76598 0.0004371 -0.17249 -9.8428E-05 0.59349 0.00033867 570.64548909319 58.932 1.8912 58.932 58.507 60.398 0 134 37 6 0 0 0 4.7812E-06 3 62156 88.73 70.714 1 276470000 1858 655 1710 1735 2177;2178;2179 2177 ALSDHHIYLEGTLLK 15 Unmodified _ALSDHHIYLEGTLLK_ 0 0 0 P04075 P04075 P04075 ALDOA Fructose-bisphosphate aldolase A MULTI-MSMS 210214_Eclipse_Hela_QC 428.236022949219 4 428.235982 1708.91482 0.31377 0.00013437 0.056072 2.4012E-05 0.36984 0.00015838 428.235938686365 58.947 0.59752 58.947 58.706 59.304 0 29 11 3 0 0 0 0.032704 1 62453 17.489 7.9585 1 4549700 1859 655 1710 1735 2180 2180 ALSEALTELGYK 12 Unmodified _ALSEALTELGYK_ 0 0 0 P34896 P34896 P34896 SHMT1 Serine hydroxymethyltransferase, cytosolic MULTI-MSMS 210214_Eclipse_Hela_QC 647.847778320312 2 647.848093 1293.68163 0.60266 0.00039044 0.42998 0.00027856 1.0326 0.000669 647.848202210869 73.946 0.69676 73.946 73.758 74.455 0 31 13 3 0 0 0 1.4949E-05 1 83453 106.16 91.487 1 10162000 1860 1171 1711 1736 2181 2181 ALSEFAALMNTER 13 Unmodified _ALSEFAALMNTER_ 0 0 0 Q6YHK3 Q6YHK3 Q6YHK3 CD109 CD109 antigen MULTI-MSMS 210214_Eclipse_Hela_QC 727.365173339844 2 726.861209 1451.70786 2.0028 0.0014557 1.103 0.00080172 3.1057 0.0022574 726.862054458505 83.534 0.89616 83.534 82.907 83.803 0 47 17 3 0 0 0 0.00016857 2 96569 82.417 57.641 1 7324000 1861 2490 1712 1737 2182;2183 2182 ALSEIAGMTLPYDTLDQVR 19 Unmodified _ALSEIAGMTLPYDTLDQVR_ 0 0 0 P28331 P28331 P28331 NDUFS1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1047.5341796875 2 1047.0328 2092.05106 1.2864 0.0013469 0.34977 0.00036622 1.6362 0.0017132 1047.53455513811 105.1 0.49857 105.1 104.93 105.43 0 19 9 3 0 0 0 1.5836E-79 1 126613 239.87 226.19 1 45295000 1862 1088 1713 1738 2184 2184 ALSGTSPDDVQPGPSVGPPSK 21 Unmodified _ALSGTSPDDVQPGPSVGPPSK_ 0 0 0 Q9Y314 Q9Y314 Q9Y314 NOSIP Nitric oxide synthase-interacting protein MULTI-MSMS 210214_Eclipse_Hela_QC 997.502502441406 2 996.997276 1991.98 1.1353 0.0011319 0.48049 0.00047905 1.6158 0.0016109 997.499115173399 49.099 0.69725 49.099 48.689 49.387 0 37 13 4 0 0 0 0.00022337 1 48605 55.213 46.259 1 7972000 1863 4031 1714 1739 2185 2185 ALSIFNELR 9 Unmodified _ALSIFNELR_ 0 0 0 Q9UJX2 Q9UJX2 Q9UJX2 CDC23 Cell division cycle protein 23 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 531.801635742188 2 531.800749 1061.58694 0.61903 0.0003292 -1.1219 -0.00059664 -0.50289 -0.00026744 531.80083136787 78.312 0.74663 78.312 77.821 78.568 0 27 14 3 0 0 0 0.013242 1 89401 51.854 27.899 1 3462900 1864 3898 1715 1740 2186 2186 ALSIGFETCR 10 Unmodified _ALSIGFETCR_ 0 0 0 P16070 P16070 P16070 CD44 CD44 antigen MULTI-MSMS 210214_Eclipse_Hela_QC 577.287902832031 2 577.287148 1152.55974 0.99378 0.0005737 -0.19641 -0.00011338 0.79738 0.00046031 577.287297976731 57.188 0.94553 57.188 56.915 57.86 0 52 18 4 0 0 0 3.6545E-09 1 59973 157.68 130.72 1 30922000 1865 908 1716 1741 2187 2187 ALSLGTIPSLTR 12 Unmodified _ALSLGTIPSLTR_ 0 0 0 Q5SNT2 Q5SNT2 Q5SNT2 TMEM201 Transmembrane protein 201 MSMS 210214_Eclipse_Hela_QC 614.866882324219 2 614.86662 1227.71869 NaN NaN NaN NaN NaN NaN NaN 80.574 1 80.574 80.074 81.074 0 0 0 0 0.0026633 1 92668 71.349 33.874 1 1866 2340 1717 1742 2188 2188 ALSMPLNGLK 10 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ALSMPLNGLK_ 1 0 0 Q9Y696 Q9Y696 Q9Y696 CLIC4 Chloride intracellular channel protein 4 MULTI-SECPEP 210214_Eclipse_Hela_QC 1085.17639160156 1 1085.60234 1084.59507 1.5144 0.001644 0.16759 0.00018193 1.682 0.0018259 1085.60276700091 98.187 0.59677 98.187 97.964 98.561 0 31 11 3 0 0 0 0.0024899 1 116920 103.56 95.996 1 10363000 1867 4140 1718 1743 2189 2189 ALSMYEEAFQNTSDSDR 17 Unmodified _ALSMYEEAFQNTSDSDR_ 0 0 0 P52948 P52948 P52948 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 MULTI-MSMS 210214_Eclipse_Hela_QC 982.923522949219 2 982.420544 1962.82654 0.90841 0.00089244 0.26569 0.00026102 1.1741 0.0011535 982.922101502279 69.442 0.59795 69.442 69.128 69.726 0 40 11 5 0 0 0 8.2063E-10 1 77015 117.98 112.13 1 7551800 1868 1488 1719 1744 2190 2190 ALSNLESIPGGYNALR 16 Unmodified _ALSNLESIPGGYNALR_ 0 0 0 Q9NRR5;Q9UMX0 Q9NRR5;Q9UMX0 Q9UMX0 UBQLN4;UBQLN1 Ubiquilin-4;Ubiquilin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 837.946044921875 2 837.944118 1673.87368 0.8421 0.00070563 0.14151 0.00011858 0.98361 0.00082421 837.9442409412 76.681 0.84608 76.681 76.279 77.125 0 44 16 4 0 0 0 0.00018502 1 87036 72.652 51.257 1 49150000 1869 3947;3629 1720 1745 2191 2191 ALSPLEEWLR 10 Unmodified _ALSPLEEWLR_ 0 0 0 P26640 P26640 P26640 VARS Valine--tRNA ligase MULTI-MSMS 210214_Eclipse_Hela_QC 607.33349609375 2 607.332413 1212.65027 1.4841 0.00090133 0.38768 0.00023545 1.8718 0.0011368 607.332433224954 94.196 1.1881 94.196 93.438 94.627 0 56 23 4 0 0 0 0.00030589 2 111332 95.099 74.769 1 17310000 1870 1064 1721 1746 2192;2193 2192 ALSQAAVEEEEEEEEEEEPAQGK 23 Unmodified _ALSQAAVEEEEEEEEEEEPAQGK_ 0 0 0 Q5JTH9 Q5JTH9 Q5JTH9 RRP12 RRP12-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 1281.0595703125 2 1280.55647 2559.0984 2.1824 0.0027946 0.067475 8.6406E-05 2.2498 0.002881 1281.05797468762 54.481 0.5369 54.481 54.188 54.725 0 34 10 5 0 0 0 3.25E-05 1 56063 101.75 90.314 1 11874000 1871 2329 1722 1747 2194 2194 ALSQLAEVEEK 11 Unmodified _ALSQLAEVEEK_ 0 0 0 O60749;Q13596 O60749;Q13596 Q13596 SNX2;SNX1 Sorting nexin-2;Sorting nexin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 608.82421875 2 608.824618 1215.63468 0.67465 0.00041075 -0.72791 -0.00044317 -0.053256 -3.2423E-05 608.824659567862 45.956 0.79626 45.956 45.632 46.428 0 43 15 4 0 0 0 3.8036E-08 1 43928 132.01 74.421 1 50398000 1872 2015;392 1723 1748 2195 2195 ALSSDSILSPAPDAR 15 Unmodified _ALSSDSILSPAPDAR_ 0 0 0 Q8IVT2 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 MULTI-MSMS 210214_Eclipse_Hela_QC 750.389404296875 2 750.388645 1498.76274 0.82799 0.00062131 0.52077 0.00039078 1.3488 0.0010121 750.38892586482 58.582 0.54743 58.582 58.259 58.806 0 25 10 3 0 0 0 2.0445E-07 1 61888 113.22 98.252 1 8635700 1873 2622 1724 1749 2196 2196 ALSSGGSITSPPLSPALPK 19 Unmodified _ALSSGGSITSPPLSPALPK_ 0 0 0 Q6Y7W6 Q6Y7W6 Q6Y7W6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 890.997924804688 2 890.496184 1778.97781 1.3545 0.0012062 0.34484 0.00030708 1.6994 0.0015133 890.49631191036 73.402 0.59793 73.402 73.11 73.708 0 33 11 4 0 0 0 0.0020043 1 82596 45.257 37.994 1 6947300 1874 2489 1725 1750 2197 2197 ALSSLELSSHLAK 13 Unmodified _ALSSLELSSHLAK_ 0 0 0 Q9BPX3 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 210214_Eclipse_Hela_QC 452.589904785156 3 452.589153 1354.74563 0.54712 0.00024762 0.012 5.431E-06 0.55912 0.00025305 452.589154339745 47.508 0.59681 47.508 47.175 47.771 0 25 11 3 0 0 0 0.027535 1 46190 30.998 21.465 1 5580600 1875 3209 1726 1751 2198 2198 ALSSLELSSHLAK 13 Unmodified _ALSSLELSSHLAK_ 0 0 0 Q9BPX3 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 210214_Eclipse_Hela_QC 678.380065917969 2 678.380091 1354.74563 1.1888 0.00080644 -0.66881 -0.00045371 0.51996 0.00035273 678.88145425146 47.497 0.64654 47.497 47.125 47.771 0 18 12 2 0 0 0 0.00024676 2 46278 68.893 37.819 1 2778100 1876 3209 1726 1751 2199;2200 2200 ALSSLHGDDQDSEDEVLTIPEVK 23 Unmodified _ALSSLHGDDQDSEDEVLTIPEVK_ 0 0 0 P11717 P11717 P11717 IGF2R Cation-independent mannose-6-phosphate receptor MULTI-MSMS 210214_Eclipse_Hela_QC 833.405212402344 3 833.069529 2496.18676 1.317 0.0010971 0.44073 0.00036716 1.7577 0.0014643 833.404693340182 76.227 0.44781 76.227 75.98 76.427 0 29 8 4 0 0 0 0.012952 1 86575 19.975 17.289 1 5070500 1877 838 1727 1752 2201 2201 ALSSVGLHMTK 11 Unmodified _ALSSVGLHMTK_ 0 0 0 Q15020 Q15020 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 MULTI-MSMS 210214_Eclipse_Hela_QC 572.313232421875 2 572.313166 1142.61178 0.44319 0.00025364 -0.50083 -0.00028663 -0.057644 -3.2991E-05 572.312864495921 30.857 0.74783 30.857 30.524 31.271 0 23 14 3 0 0 0 0.004842 1 22716 53.124 28.969 1 6208700 1878 2133 1728 1753 2202 2202 ALSTDPAAPNLK 12 Unmodified _ALSTDPAAPNLK_ 0 0 0 Q9Y490 Q9Y490 Q9Y490 TLN1 Talin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 599.328063964844 2 599.327328 1196.6401 0.57465 0.0003444 -0.046032 -2.7588E-05 0.52862 0.00031681 599.327243538419 38.91 0.59296 38.91 38.586 39.179 0 32 11 4 0 0 0 0.00037671 1 33940 91.867 72.09 1 23552000 1879 4084 1729 1754 2203 2203 ALSTTASTAAFDK 13 Unmodified _ALSTTASTAAFDK_ 0 0 0 P57772 P57772 P57772 EEFSEC Selenocysteine-specific elongation factor MULTI-MSMS 210214_Eclipse_Hela_QC 642.82958984375 2 642.327524 1282.6405 0.15943 0.00010241 -0.34538 -0.00022185 -0.18596 -0.00011944 642.327511999526 37.813 0.44915 37.813 37.596 38.045 0 25 8 4 0 0 0 0.00019408 1 32668 79.82 53.306 1 6983900 1880 1568 1730 1755 2204 2204 ALSVGLVK 8 Unmodified _ALSVGLVK_ 0 0 0 Q9UNM6 Q9UNM6 Q9UNM6 PSMD13 26S proteasome non-ATPase regulatory subunit 13 MULTI-MSMS 210214_Eclipse_Hela_QC 393.758056640625 2 393.757821 785.501089 0.31061 0.00012231 -0.022967 -9.0436E-06 0.28765 0.00011326 393.757760620308 42.062 0.94138 42.062 41.456 42.398 0 39 18 3 0 0 0 0.054306 1 38248 40.103 13.141 1 19539000 1881 3959 1731 1756 2205 2205 ALSVGNIDDALQCYSEAIK 19 Unmodified _ALSVGNIDDALQCYSEAIK_ 0 0 0 P31948 P31948 P31948 STIP1 Stress-induced-phosphoprotein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1033.98315429688 2 1034.00679 2065.99902 1.2757 0.0013191 -0.20808 -0.00021516 1.0676 0.0011039 1034.00671620675 103.91 0.94547 103.91 103.53 104.48 0 76 18 6 0 0 0 5.4921E-57 2 125161 203.82 190.84 1 124220000 1882 1153 1732 1757 2206;2207 2207 ALSVLGCGHTSSTK 14 Unmodified _ALSVLGCGHTSSTK_ 0 0 0 Q5T4S7 Q5T4S7 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 MULTI-MSMS 210214_Eclipse_Hela_QC 473.241424560547 3 473.241647 1416.70311 -0.28962 -0.00013706 -0.89932 -0.00042559 -1.1889 -0.00056265 473.241308458192 25.089 0.29842 25.089 24.915 25.214 0 13 5 3 0 0 0 0.030099 1 14449 22.985 5.3191 1 6079600 1883 2358 1733 1758 2208 2208 ALSVYGLPIR 10 Unmodified _ALSVYGLPIR_ 0 0 0 Q9H6W3 Q9H6W3 Q9H6W3 NO66 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 MULTI-MSMS 210214_Eclipse_Hela_QC 544.827209472656 2 544.826766 1087.63898 0.4923 0.00026822 -0.49377 -0.00026902 -0.001468 -7.9983E-07 544.826818127128 76.912 0.49814 76.912 76.627 77.125 0 12 9 2 0 0 0 0.035485 1 87659 37.727 20.332 1 1527500 1884 3490 1734 1759 2209 2209 ALTALFK 7 Unmodified _ALTALFK_ 0 0 0 Q9UBB4 Q9UBB4 Q9UBB4 ATXN10 Ataxin-10 MULTI-MSMS 210214_Eclipse_Hela_QC 382.239410400391 2 382.239264 762.463976 0.54779 0.00020939 -0.17457 -6.6728E-05 0.37322 0.00014266 382.239151528116 53.814 0.54739 53.814 53.541 54.088 0 16 10 2 0 0 0 0.025483 1 55262 59.641 28.972 1 2547200 1885 3809 1735 1760 2210 2210 ALTAVSPDSTLLFNAYVHFQGK 22 Unmodified _ALTAVSPDSTLLFNAYVHFQGK_ 0 0 0 CON__Q3SZH5 CON__Q3SZH5 CON__Q3SZH5 MULTI-MSMS 210214_Eclipse_Hela_QC 794.086120605469 3 793.749625 2378.22705 1.5156 0.001203 0.095096 7.5482E-05 1.6107 0.0012785 794.08407063982 103.98 1.1439 103.98 103.58 104.73 0 76 22 6 0 0 0 2.3683E-10 2 124873 103.85 96.047 1 29983000 + 1886 101 1736 1761 2211;2212 2212 ALTDAGCNLNPLQYIK 16 Unmodified _ALTDAGCNLNPLQYIK_ 0 0 0 Q8WVM8 Q8WVM8 Q8WVM8 SCFD1 Sec1 family domain-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 896.461181640625 2 895.958911 1789.90327 1.7481 0.0015663 -1.2514 -0.0011212 0.49678 0.00044509 896.459297386738 95.433 0.74521 95.433 94.975 95.72 0 56 14 6 0 0 0 4.0294E-05 2 113295 90.05 81.046 1 16586000 1887 2841 1737 1762 2213;2214 2214 ALTDLVSEGR 10 Unmodified _ALTDLVSEGR_ 0 0 0 Q9Y4H2 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 MULTI-MSMS 210214_Eclipse_Hela_QC 530.785461425781 2 530.785296 1059.55604 0.37218 0.00019755 0.089357 4.7429E-05 0.46154 0.00024498 530.78543641309 54.749 0.89547 54.749 54.426 55.322 0 22 17 2 0 0 0 0.011448 1 56577 50.805 37.427 1 2786400 1888 4088 1738 1763 2215 2215 ALTHIDHSLSR 11 Unmodified _ALTHIDHSLSR_ 0 0 0 P56192 P56192 P56192 MARS Methionine--tRNA ligase, cytoplasmic MULTI-MSMS 210214_Eclipse_Hela_QC 625.336364746094 2 625.336018 1248.65748 0.33065 0.00020676 0.96745 0.00060498 1.2981 0.00081175 625.335226979114 22.117 0.64549 22.117 21.709 22.354 0 33 12 4 0 0 0 0.00087136 1 10167 70.399 51.42 1 24615000 1889 1551 1739 1764 2216 2216 ALTLDQWLEQHK 12 Unmodified _ALTLDQWLEQHK_ 0 0 0 Q9HBL8 Q9HBL8 Q9HBL8 NMRAL1 NmrA-like family domain-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 494.596618652344 3 494.596419 1480.76743 0.74305 0.00036751 -0.39624 -0.00019598 0.34681 0.00017153 494.596100631615 73.085 0.5483 73.085 72.861 73.41 0 23 10 3 0 0 0 0.03862 1 82283 21.06 13.689 1 3784800 1890 3549 1740 1765 2217 2217 ALTLGALTLPLAR 13 Unmodified _ALTLGALTLPLAR_ 0 0 0 Q9BSJ8 Q9BSJ8 Q9BSJ8 ESYT1 Extended synaptotagmin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 655.4150390625 2 655.413737 1308.81292 0.83824 0.00054939 0.11338 7.4309E-05 0.95161 0.0006237 655.413740749913 104.33 0.54697 104.33 104.03 104.58 0 36 10 4 0 0 0 6.1939E-06 1 125366 107.24 93.126 1 15853000 1891 3259 1741 1766 2218 2218 ALTLIAGSPLK 11 Unmodified _ALTLIAGSPLK_ 0 0 0 Q86VP6 Q86VP6 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 542.342529296875 2 542.342249 1082.66995 0.24706 0.00013399 0.22582 0.00012247 0.47288 0.00025646 542.342309313413 69.053 0.67361 69.053 68.704 69.377 0 40 13 5 0 0 0 0.00080022 1 76321 72.325 65.175 1 31084000 1892 2587 1742 1767 2219 2219 ALTLPGSSENEYIMK 15 Unmodified _ALTLPGSSENEYIMK_ 0 0 0 P55060 P55060 P55060 CSE1L Exportin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 826.914428710938 2 826.913638 1651.81272 1.2682 0.0010487 0.0049473 4.091E-06 1.2731 0.0010528 826.913730185847 72.593 0.8465 72.593 72.264 73.11 0 66 16 6 0 0 0 1.2337E-10 2 81417 122.51 105.48 1 87585000 1893 1529 1743 1768 2220;2221 2221 ALTNLPHTDFTLCK 14 Unmodified _ALTNLPHTDFTLCK_ 0 0 0 Q9UBQ5 Q9UBQ5 Q9UBQ5 EIF3K Eukaryotic translation initiation factor 3 subunit K MULTI-MSMS 210214_Eclipse_Hela_QC 544.614868164062 3 544.280102 1629.81848 0.64919 0.00035334 -0.29278 -0.00015936 0.35641 0.00019398 544.614283100175 62.802 0.74556 62.802 62.479 63.224 0 39 14 3 0 0 0 1.0787E-06 1 67723 90.412 79.558 1 27792000 1894 3826 1744 1769 2222 2222 ALTNLPHTDFTLCK 14 Unmodified _ALTNLPHTDFTLCK_ 0 0 0 Q9UBQ5 Q9UBQ5 Q9UBQ5 EIF3K Eukaryotic translation initiation factor 3 subunit K MULTI-MSMS 210214_Eclipse_Hela_QC 815.918762207031 2 815.916515 1629.81848 0.99644 0.00081301 -0.17281 -0.00014099 0.82363 0.00067202 815.916875169964 62.825 0.44725 62.825 62.578 63.025 0 15 8 2 0 0 0 0.026447 1 67912 35.414 25.461 1 2161800 1895 3826 1744 1769 2223 2223 ALTPQTAETDAIR 13 Unmodified _ALTPQTAETDAIR_ 0 0 0 Q53HC9 Q53HC9 Q53HC9 TSSC1 Protein TSSC1 MULTI-MSMS 210214_Eclipse_Hela_QC 693.86572265625 2 693.864805 1385.71506 0.80008 0.00055515 -0.36605 -0.00025399 0.43403 0.00030116 693.864691923012 44.151 0.44744 44.151 43.942 44.389 0 20 8 3 0 0 0 0.0002562 1 41673 73.499 64.165 1 6084400 1896 2306 1745 1770 2224 2224 ALTQTGGPHVK 11 Unmodified _ALTQTGGPHVK_ 0 0 0 P21333 P21333 P21333 FLNA Filamin-A MULTI-MSMS 210214_Eclipse_Hela_QC 554.809265136719 2 554.809105 1107.60366 0.93323 0.00051777 0.047541 2.6376E-05 0.98077 0.00054414 554.809146965979 16.315 0.67772 16.315 16.191 16.869 0 116 48 3 0 0 0 1.2115E-10 1 2891 138.4 97.367 1 50849000 1897 995 1746 1771 2225 2225 ALTSADGASEEQSQNDEDNQGSEK 24 Unmodified _ALTSADGASEEQSQNDEDNQGSEK_ 0 0 0 Q92552 Q92552 Q92552 MRPS27 28S ribosomal protein S27, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1256.02612304688 2 1255.5235 2509.03244 1.7044 0.0021399 -0.15333 -0.00019251 1.5511 0.0019474 1256.0244987125 23.048 0.34868 23.048 22.853 23.201 0 18 6 4 0 0 0 0.037939 1 11495 26.729 26.729 1 3915600 1898 2884 1747 1772 2226 2226 ALTSEIALLQSR 12 Unmodified _ALTSEIALLQSR_ 0 0 0 P04843 P04843 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 651.876403808594 2 651.374809 1300.73507 0.33413 0.00021764 0.30228 0.0001969 0.63641 0.00041454 651.374990950844 75.178 0.84755 75.178 74.803 75.651 0 47 16 4 0 0 0 1.6461E-05 1 84922 104.95 84.385 1 69288000 1899 671 1748 1773 2227 2227 ALTSELANAR 10 Unmodified _ALTSELANAR_ 0 0 0 P26038 P26038 P26038 MSN Moesin MULTI-MSMS 210214_Eclipse_Hela_QC 523.285827636719 2 523.285463 1044.55637 0.15074 7.8881E-05 0.044547 2.3311E-05 0.19529 0.00010219 523.285492823645 34.141 0.81301 34.141 33.767 34.581 0 47 16 4 0 0 0 1.0199E-09 1 27117 163.99 114.63 1 255560000 1900 1054 1749 1774 2228 2228 ALTSQLTDEELAQGR 15 Unmodified _ALTSQLTDEELAQGR_ 0 0 0 P23368 P23368 P23368 ME2 NAD-dependent malic enzyme, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 816.417297363281 2 816.415391 1630.81623 1.2013 0.00098076 -0.44693 -0.00036488 0.75437 0.00061588 816.415594054179 57.466 0.74682 57.466 57.014 57.761 0 37 14 4 0 0 0 1.0315E-10 1 60269 124.42 108.79 1 9287200 1901 1021 1750 1775 2229 2229 ALTTMGFR 8 Unmodified _ALTTMGFR_ 0 0 0 P30626 P30626 P30626 SRI Sorcin MULTI-MSMS 210214_Eclipse_Hela_QC 448.73681640625 2 448.736563 895.458573 0.37206 0.00016696 -0.1325 -5.9456E-05 0.23956 0.0001075 448.736446353082 44.961 0.74685 44.961 44.587 45.334 0 24 14 2 0 0 0 0.011483 1 42929 64.803 41.008 1 14053000 1902 1132 1751 1776 2230 2230 ALTVAELTQQMFDAR 15 Unmodified _ALTVAELTQQMFDAR_ 0 0 0 CON__ENSEMBL:ENSBTAP00000025008 CON__ENSEMBL:ENSBTAP00000025008 CON__ENSEMBL:ENSBTAP00000025008 MULTI-SECPEP 210214_Eclipse_Hela_QC 848.113586425781 2 847.432529 1692.85051 1.2517 0.0010607 -0.61875 -0.00052434 0.63295 0.00053638 847.431742229787 105.15 0.19968 105.15 105.03 105.23 0 6 3 2 0 0 0 0.016352 1 126679 62.088 50.222 1 5041400 + 1903 39 1752 1777 2231 2231 ALTVAHELLCNKPEEEK 17 Unmodified _ALTVAHELLCNKPEEEK_ 0 0 1 Q03701 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta MULTI-MSMS 210214_Eclipse_Hela_QC 661.006958007812 3 661.006819 1979.99863 0.45545 0.00030105 -0.087334 -5.7728E-05 0.36811 0.00024333 661.006477929212 40.505 0.69656 40.505 40.164 40.86 0 33 13 4 0 0 0 0.00052799 1 36385 57.936 47.277 1 10766000 1904 1843 1753 1778 2232 2232 ALTVPELTQQMFDAK 15 Unmodified _ALTVPELTQQMFDAK_ 0 0 0 P68371;P04350;Q13509 P68371;Q13509 P68371 TUBB4B;TUBB4A;TUBB3 Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain MULTI-MSMS 210214_Eclipse_Hela_QC 846.437744140625 2 846.43728 1690.86001 1.3416 0.0011355 -0.81205 -0.00068735 0.52951 0.00044819 846.436817480736 96.281 2.0452 96.281 95.67 97.716 0 206 41 9 0 0 0 2.7697E-30 3 114679 167.18 159.92 1 432960000 1905 1732;2001 1754 1779 2233;2234;2235 2234 ALTVPELTQQMFDAR 15 Unmodified _ALTVPELTQQMFDAR_ 0 0 0 Q9BUF5 Q9BUF5 Q9BUF5 TUBB6 Tubulin beta-6 chain MULTI-MSMS 210214_Eclipse_Hela_QC 860.442016601562 2 860.440354 1718.86616 1.8299 0.0015745 0.21056 0.00018117 2.0405 0.0017557 860.440908324269 98.326 0.84575 98.326 97.914 98.76 0 54 16 4 0 0 0 8.3136E-05 2 117032 93.258 83.026 1 17548000 1906 3286 1755 1780 2236;2237 2236 ALTVPELTQQMFDSK 15 Unmodified _ALTVPELTQQMFDSK_ 0 0 0 Q9BVA1;Q13885 Q9BVA1 Q9BVA1 TUBB2B;TUBB2A Tubulin beta-2B chain;Tubulin beta-2A chain MULTI-MSMS 210214_Eclipse_Hela_QC 854.938415527344 2 854.434738 1706.85492 1.0934 0.00093426 -0.66752 -0.00057035 0.4259 0.00036391 854.433897299112 76.403 0.84628 76.403 75.88 76.726 0 40 16 4 0 0 0 0.00077614 1 86693 56.359 0.95858 1 23075000 1907 2039 1756 1781 2238 2238 ALTVPELTQQMFDSK 15 Unmodified _ALTVPELTQQMFDSK_ 0 0 0 Q9BVA1;Q13885 Q9BVA1 Q9BVA1 TUBB2B;TUBB2A Tubulin beta-2B chain;Tubulin beta-2A chain MULTI-MSMS 210214_Eclipse_Hela_QC 854.435241699219 2 854.434738 1706.85492 1.3111 0.0011203 -0.64175 -0.00054834 0.66936 0.00057192 854.434400907724 96.321 1.2053 96.321 95.863 97.069 0 34 24 2 0 0 0 3.5266E-05 1 114610 93.258 3.8542 1 15667000 1908 2039 1756 1781 2239 2239 ALTVPELTQQVFDAK 15 Unmodified _ALTVPELTQQVFDAK_ 0 0 0 P07437 P07437 P07437 TUBB Tubulin beta chain MULTI-MSMS 210214_Eclipse_Hela_QC 830.100708007812 2 830.451245 1658.88794 1.4336 0.0011905 -0.34324 -0.00028504 1.0904 0.0009055 830.451101757155 94.701 1.6351 94.701 94.035 95.67 0 152 32 7 0 0 0 5.6146E-46 6 112173 205.56 170.05 1 756800000 1909 722 1757 1782 2240;2241;2242;2243;2244;2245 2242 ALVADSHPESER 12 Unmodified _ALVADSHPESER_ 0 0 0 Q01082 Q01082 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 210214_Eclipse_Hela_QC 437.549285888672 3 437.549357 1309.62624 0.045093 1.9731E-05 0.30408 0.00013305 0.34918 0.00015278 437.549491925405 19.393 0.79644 19.393 19.17 19.966 0 27 15 4 0 0 0 0.0046392 1 6139 47.189 38.676 1 12121000 1910 1809 1758 1783 2246 2246 ALVAESHNMK 10 Unmodified _ALVAESHNMK_ 0 0 0 Q92541 Q92541 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 550.282165527344 2 550.281866 1098.54918 0.33143 0.00018238 0.91039 0.00050097 1.2418 0.00068335 550.282397934673 19.097 0.44771 19.097 18.871 19.319 0 23 8 4 0 0 0 0.0012448 1 5751 76.478 53.435 1 6550100 1911 2880 1759 1784 2247 2247 ALVAIGTHDLDTLSGPFTYTAK 22 Unmodified _ALVAIGTHDLDTLSGPFTYTAK_ 0 0 0 Q9NSD9 Q9NSD9 Q9NSD9 FARSB Phenylalanine--tRNA ligase beta subunit MULTI-MSMS 210214_Eclipse_Hela_QC 764.739013671875 3 764.402114 2290.18451 1.5034 0.0011492 0.46166 0.00035289 1.9651 0.0015021 764.736936606913 92.419 1.1442 92.419 91.748 92.892 0 71 22 6 0 0 0 2.2854E-07 1 108853 85.231 81.045 1 32411000 1912 3641 1760 1785 2248 2248 ALVALGAVDTALYAVGGK 18 Unmodified _ALVALGAVDTALYAVGGK_ 0 0 0 CON__ENSEMBL:ENSBTAP00000007350;CON__P01030 CON__ENSEMBL:ENSBTAP00000007350;CON__P01030 CON__ENSEMBL:ENSBTAP00000007350 MULTI-MSMS 210214_Eclipse_Hela_QC 845.485656738281 2 844.982712 1687.95087 1.5082 0.0012744 -0.43705 -0.0003693 1.0711 0.0009051 844.982074182323 105.25 0.44852 105.25 105.13 105.58 0 22 8 4 0 0 0 3.7418E-08 1 126890 111.79 102.84 1 40113000 + 1913 33;47 1761 1786 2249 2249 ALVAMNENLK 10 Unmodified _ALVAMNENLK_ 0 0 0 Q567U6 Q567U6 Q567U6 CCDC93 Coiled-coil domain-containing protein 93 MULTI-MSMS 210214_Eclipse_Hela_QC 551.799682617188 2 551.799891 1101.58523 0.57874 0.00031935 0.082119 4.5313E-05 0.66086 0.00036466 551.800044459056 44.411 0.49619 44.411 44.041 44.537 0 13 9 3 0 0 0 0.013988 1 42033 49.423 30.647 1 3580000 1914 2310 1762 1787 2250 2250 ALVATPGK 8 Unmodified _ALVATPGK_ 0 0 0 P19338 P19338 P19338 NCL Nucleolin MULTI-MSMS 210214_Eclipse_Hela_QC 378.734497070312 2 378.734346 755.454139 -0.16702 -6.3258E-05 0.39849 0.00015092 0.23147 8.7664E-05 378.734472565687 23.027 1.196 23.027 22.803 23.999 0 37 23 3 0 0 0 0.0024401 1 11365 102.71 58.103 1 133490000 1915 964 1763 1788 2251 2251 ALVATPGKK 9 Unmodified _ALVATPGKK_ 0 0 1 P19338 P19338 P19338 NCL Nucleolin MULTI-MSMS 210214_Eclipse_Hela_QC 442.781829833984 2 442.781828 883.549102 1.0691 0.00047338 -0.43385 -0.0001921 0.63526 0.00028128 442.781583328421 17.53 1.6373 17.53 16.44 18.077 0 528 166 4 0 0 0 0.0017695 2 3824 96.492 64.021 1 8652500 1916 964 1764 1789 2252;2253 2253 ALVAYYQK 8 Unmodified _ALVAYYQK_ 0 0 0 P62249 P62249 P62249 RPS16 40S ribosomal protein S16 MULTI-MSMS 210214_Eclipse_Hela_QC 478.265991210938 2 478.26601 954.517468 0.03062 1.4644E-05 0.5896 0.00028199 0.62022 0.00029663 478.266099841203 34.612 1.8232 34.612 33.916 35.74 0 92 37 4 0 0 0 0.00058053 1 27926 119.06 36.797 1 127100000 1917 1646 1765 1790 2254 2254 ALVDHENVISCPHLGASTK 19 Unmodified _ALVDHENVISCPHLGASTK_ 0 0 0 O43175 O43175 O43175 PHGDH D-3-phosphoglycerate dehydrogenase MULTI-MSMS 210214_Eclipse_Hela_QC 513.011291503906 4 512.761195 2047.01567 0.59603 0.00030562 -0.12656 -6.4893E-05 0.46948 0.00024073 513.011865850174 43.867 1.5916 43.867 43.494 45.085 0 123 31 6 0 0 0 2.9322E-47 2 41166 156.39 142.96 1 581020000 1918 288 1766 1791 2255;2256 2256 ALVDHENVISCPHLGASTK 19 Unmodified _ALVDHENVISCPHLGASTK_ 0 0 0 O43175 O43175 O43175 PHGDH D-3-phosphoglycerate dehydrogenase MULTI-MSMS 210214_Eclipse_Hela_QC 683.348510742188 3 683.345834 2047.01567 1.0167 0.00069476 0.19814 0.0001354 1.2148 0.00083016 683.680329036864 43.864 0.59703 43.864 43.543 44.141 0 49 11 6 0 0 0 7.9442E-19 1 41030 117.55 103.71 1 57128000 1919 288 1766 1791 2257 2257 ALVDILSEVSK 11 Unmodified _ALVDILSEVSK_ 0 0 0 Q9BQG0 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 587.340393066406 2 587.339904 1172.66525 1.6249 0.00095439 -0.28381 -0.00016669 1.3411 0.00078769 587.33972451382 93.614 0.94438 93.614 93.24 94.184 0 54 18 4 0 0 0 0.00046741 1 110497 81.338 77.591 1 27490000 1920 3227 1767 1792 2258 2258 ALVDPGPDFVVCDEGHILK 19 Unmodified _ALVDPGPDFVVCDEGHILK_ 0 0 0 P46100 P46100 P46100 ATRX Transcriptional regulator ATRX MULTI-MSMS 210214_Eclipse_Hela_QC 694.686706542969 3 694.350585 2080.02993 0.66617 0.00046256 0.61665 0.00042817 1.2828 0.00089073 694.351024890154 82.589 0.46176 82.589 82.395 82.857 0 23 10 3 0 0 0 0.01525 1 95530 18.353 9.0697 1 9053200 1921 1304 1768 1793 2259 2259 ALVEEALAQR 10 Unmodified _ALVEEALAQR_ 0 0 0 Q9HB07 Q9HB07 Q9HB07 C12orf10 UPF0160 protein MYG1, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 550.30908203125 2 550.308938 1098.60332 0.65661 0.00036134 0.014309 7.8746E-06 0.67092 0.00036921 550.308833556913 49.111 0.54796 49.111 48.789 49.337 0 29 10 4 0 0 0 0.00076266 1 48401 82.452 65.067 1 18670000 1922 3541 1769 1794 2260 2260 ALVEFESNPEETREPGSPPSVQR 23 Unmodified _ALVEFESNPEETREPGSPPSVQR_ 0 0 1 Q9H6F5 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 MULTI-SECPEP 210214_Eclipse_Hela_QC 853.071166992188 3 852.417263 2554.22996 1.5382 0.0013112 -1.6918 -0.0014421 -0.15364 -0.00013097 852.414155424359 56.74 0.84547 56.74 56.467 57.312 0 42 16 4 0 0 0 2.3914E-08 1 59356 98.269 84.702 1 26936000 1923 3482 1770 1795 2261 2261 ALVEFTNSPDCLSK 14 Unmodified _ALVEFTNSPDCLSK_ 0 0 0 Q9UIA9 Q9UIA9 Q9UIA9 XPO7 Exportin-7 MULTI-MSMS 210214_Eclipse_Hela_QC 791.388122558594 2 790.884881 1579.75521 0.96032 0.0007595 0.09863 7.8005E-05 1.0589 0.00083751 790.884996963855 64.681 0.9185 64.681 64.435 65.354 0 46 18 4 0 0 0 1.3758E-09 3 70385 128.17 121.78 1 12645000 1924 3883 1771 1796 2262;2263;2264 2262 ALVENCLVPDLWIR 14 Unmodified _ALVENCLVPDLWIR_ 0 0 0 Q15020 Q15020 Q15020 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 MULTI-MSMS 210214_Eclipse_Hela_QC 849.961791992188 2 849.455807 1696.89706 0.75187 0.00063868 1.9568 0.0016622 2.7087 0.0023009 849.959406366558 105.95 0.34906 105.95 105.67 106.02 0 15 6 3 0 0 0 0.0010913 1 127847 55.718 43.087 1 26664000 1925 2133 1772 1797 2265 2265 ALVFVDNHDNQR 12 Unmodified _ALVFVDNHDNQR_ 0 0 0 CON__Q3MHH8;P19961;P04745;P04746 CON__Q3MHH8 CON__Q3MHH8 AMY2B;AMY1A;AMY2A Alpha-amylase 2B;Alpha-amylase 1;Pancreatic alpha-amylase MULTI-MSMS 210214_Eclipse_Hela_QC 476.906799316406 3 476.572385 1426.69533 -0.09882 -4.7095E-05 0.52628 0.00025081 0.42746 0.00020371 476.572607160906 32.769 0.62032 32.769 32.461 33.081 0 22 12 2 0 0 0 0.0006006 1 25276 68.44 62.004 1 7906600 + 1926 95 1773 1798 2266 2266 ALVGLVNDESPEIQAQCNK 19 Unmodified _ALVGLVNDESPEIQAQCNK_ 0 0 0 O43156 O43156 O43156 TTI1 TELO2-interacting protein 1 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 1043.01745605469 2 1043.01769 2084.02082 1.2614 0.0013157 -0.043384 -4.525E-05 1.2181 0.0012705 1043.01757612896 68.078 0.4973 68.078 67.809 68.306 0 21 9 3 0 0 0 0.00018523 1 75241 62.408 48.98 1 3363300 1927 284 1774 1799 2267 2267 ALVHERDEAAYGELR 15 Unmodified _ALVHERDEAAYGELR_ 0 0 1 Q9UL46 Q9UL46 Q9UL46 PSME2 Proteasome activator complex subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 576.960632324219 3 576.960309 1727.8591 0.51154 0.00029514 -0.2819 -0.00016264 0.22964 0.00013249 576.960082343529 29.438 0.44732 29.438 29.181 29.628 0 12 8 2 0 0 0 0.0099603 1 20726 42.958 24.545 1 4649500 1928 3927 1775 1800 2268 2268 ALVLANPEVSLWR 13 Unmodified _ALVLANPEVSLWR_ 0 0 0 Q9NU22 Q9NU22 Q9NU22 MDN1 Midasin MULTI-MSMS 210214_Eclipse_Hela_QC 734.419921875 2 734.419551 1466.82455 1.6056 0.0011792 -0.10312 -7.573E-05 1.5025 0.0011035 734.419662549098 93.811 0.54722 93.811 93.488 94.035 0 25 10 3 0 0 0 0.015688 1 110939 47.261 40.728 1 2498100 1929 3654 1776 1801 2269 2269 ALVLAQIR 8 Unmodified _ALVLAQIR_ 0 0 0 O95163 O95163 O95163 IKBKAP Elongator complex protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 442.289794921875 2 442.28982 882.565087 0.1858 8.2177E-05 -0.1289 -5.7013E-05 0.056895 2.5164E-05 442.289833619086 52.917 0.44865 52.917 52.693 53.142 0 13 8 2 0 0 0 0.05116 1 53961 41.302 10.634 1 2305400 1930 538 1777 1802 2270 2270 ALVLDCHYPEDEVGQEDEAESDIFSIR 27 Unmodified _ALVLDCHYPEDEVGQEDEAESDIFSIR_ 0 0 0 Q07021 Q07021 Q07021 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1046.47521972656 3 1046.13991 3135.39789 1.3156 0.0013763 -0.34714 -0.00036315 0.96851 0.0010132 1046.473777493 96.944 1.889 96.944 96.124 98.013 0 206 37 9 0 0 0 2.1483E-75 2 115300 202.46 202.02 1 235860000 1931 1872 1778 1803 2271;2272 2271 ALVLELCCNDESGEDVEVPYVR 22 Unmodified _ALVLELCCNDESGEDVEVPYVR_ 0 0 0 P22314 P22314 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1284.09851074219 2 1283.59363 2565.1727 2.2684 0.0029117 0.071796 9.2158E-05 2.3402 0.0030038 1284.0953025349 99.612 1.3917 99.612 99.257 100.65 0 83 27 4 0 0 0 8.4923E-79 1 118949 219.52 216.89 1 21486000 1932 1009 1779 1804 2273 2273 ALVLNTPNNPLGK 13 Unmodified _ALVLNTPNNPLGK_ 0 0 0 Q16773 Q16773 Q16773 CCBL1 Kynurenine--oxoglutarate transaminase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 676.392333984375 2 675.890626 1349.7667 0.49225 0.00033271 -0.64157 -0.00043363 -0.14932 -0.00010092 675.890238404696 64.281 0.37717 64.281 64.021 64.398 0 16 7 3 0 0 0 0.00088431 1 69833 63.283 45.224 1 5129000 1933 2252 1780 1805 2274 2274 ALVLTEIGPK 10 Unmodified _ALVLTEIGPK_ 0 0 0 O14732 O14732 O14732 IMPA2 Inositol monophosphatase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 520.821411132812 2 520.82115 1039.62775 0.40144 0.00020908 -0.12687 -6.6077E-05 0.27457 0.000143 520.821054838664 62.77 0.59629 62.77 62.479 63.075 0 31 11 4 0 0 0 0.001003 1 67735 79.474 72.244 1 9487400 1934 201 1781 1806 2275 2275 ALVNCQYSSATFSTGER 17 Unmodified _ALVNCQYSSATFSTGER_ 0 0 0 Q9NPD3 Q9NPD3 Q9NPD3 EXOSC4 Exosome complex component RRP41 MULTI-MSMS 210214_Eclipse_Hela_QC 946.438293457031 2 945.936164 1889.85778 1.0183 0.00096325 0.10246 9.692E-05 1.1208 0.0010602 946.437774374423 54.943 0.54748 54.943 54.675 55.222 0 33 10 4 0 0 0 1.2527E-12 1 56730 132.59 126.74 1 10207000 1935 3583 1782 1807 2276 2276 ALVNLAADPGLHETLLAADPGLPAR 25 Unmodified _ALVNLAADPGLHETLLAADPGLPAR_ 0 0 0 Q9BTY7 Q9BTY7 Q9BTY7 HGH1 Protein HGH1 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 833.1298828125 3 832.458734 2494.35437 1.8949 0.0015774 0.7709 0.00064174 2.6658 0.0022192 832.793670320953 98.312 0.64706 98.312 98.063 98.71 0 20 12 2 0 0 0 0.00042344 1 117292 44.258 40.917 1 7247400 1936 3281 1783 1808 2277 2277 ALVNQLHER 9 Unmodified _ALVNQLHER_ 0 0 0 Q9HCC0 Q9HCC0 Q9HCC0 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 540.3017578125 2 540.301447 1078.58834 0.67637 0.00036545 0.16473 8.9005E-05 0.84111 0.00045445 540.301551260026 23.083 0.3987 23.083 22.952 23.351 0 12 7 3 0 0 0 0.00065247 1 11575 94.302 78.1 1 6038900 1937 3556 1784 1809 2278 2278 ALVPDSVK 8 Unmodified _ALVPDSVK_ 0 0 0 Q9NPA8 Q9NPA8 Q9NPA8 ENY2 Transcription and mRNA export factor ENY2 MULTI-MSMS 210214_Eclipse_Hela_QC 414.744964599609 2 414.744911 827.475269 0.09088 3.7692E-05 -0.22325 -9.2592E-05 -0.13237 -5.49E-05 414.744732358854 32.401 0.54626 32.401 32.114 32.66 0 17 10 2 0 0 0 0.0099908 1 24717 67.032 14.349 1 9099000 1938 3581 1785 1810 2279 2279 ALVPMFVR 8 Unmodified _ALVPMFVR_ 0 0 0 P16435 P16435 P16435 POR NADPH--cytochrome P450 reductase MULTI-MSMS 210214_Eclipse_Hela_QC 467.274688720703 2 466.772948 931.531344 0.5939 0.00027722 0.12479 5.8249E-05 0.71869 0.00033547 466.772953514158 72.488 0.64729 72.488 72.164 72.812 0 22 12 2 0 0 0 0.011501 1 81253 64.776 58.737 1 10774000 1939 920 1786 1811 2280 2280 ALVQLPR 7 Unmodified _ALVQLPR_ 0 0 0 Q92917 Q92917 Q92917 GPKOW G patch domain and KOW motifs-containing protein MULTI-MSMS 210214_Eclipse_Hela_QC 398.755676269531 2 398.755613 795.496673 -0.046344 -1.848E-05 -0.2394 -9.5461E-05 -0.28574 -0.00011394 398.755483867375 45.634 0.59687 45.634 45.284 45.881 0 19 11 2 0 0 0 0.0054519 1 43637 99.511 37.513 1 6003900 1940 2922 1787 1812 2281 2281 ALVQNDTLLQVK 12 Unmodified _ALVQNDTLLQVK_ 0 0 0 Q92522 Q92522 Q92522 H1FX Histone H1x MULTI-MSMS 210214_Eclipse_Hela_QC 671.39013671875 2 671.390459 1340.76637 -0.084454 -5.6702E-05 0.017682 1.1871E-05 -0.066772 -4.483E-05 671.39043504587 62.117 0.93693 62.117 61.741 62.678 0 53 18 4 0 0 0 1.8145E-11 1 66699 140.75 103.56 1 114870000 1941 2877 1788 1813 2282 2282 ALVQSLLAK 9 Unmodified _ALVQSLLAK_ 0 0 0 Q9NX46 Q9NX46 Q9NX46 ADPRHL2 Poly(ADP-ribose) glycohydrolase ARH3 MULTI-MSMS 210214_Eclipse_Hela_QC 471.802947998047 2 471.80276 941.590967 0.65937 0.00031109 -0.34061 -0.0001607 0.31875 0.00015039 471.802442939493 57.287 0.44757 57.287 56.915 57.362 0 21 8 3 0 0 0 0.0018227 1 60002 79.469 42.309 1 4260500 1942 3719 1789 1814 2283 2283 ALVSAQWVAEALR 13 Unmodified _ALVSAQWVAEALR_ 0 0 0 P25325 P25325 P25325 MPST 3-mercaptopyruvate sulfurtransferase MULTI-MSMS 210214_Eclipse_Hela_QC 707.398681640625 2 707.396076 1412.7776 1.0471 0.00074068 0.19832 0.00014029 1.2454 0.00088097 707.396156050709 96.115 0.95376 96.115 95.816 96.77 0 43 19 3 0 0 0 7.8571E-05 1 114074 93.058 75.194 1 7055900 1943 1041 1790 1815 2284 2284 ALVSEWK 7 Unmodified _ALVSEWK_ 0 0 0 Q16531 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 416.731597900391 2 416.731803 831.449054 -0.15457 -6.4413E-05 0.10895 4.5403E-05 -0.045618 -1.901E-05 416.731783930112 37.733 1.1821 37.733 37.16 38.342 0 61 23 4 0 0 0 0.0053838 1 32320 100.07 63.479 1 20486000 1944 2229 1791 1816 2285 2285 ALVSHNGSLINVGSLLQR 18 Unmodified _ALVSHNGSLINVGSLLQR_ 0 0 0 Q8N163 Q8N163 Q8N163 CCAR2 Cell cycle and apoptosis regulator protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 626.690307617188 3 626.690041 1877.04829 1.12 0.00070188 -0.35528 -0.00022265 0.76469 0.00047923 627.024084181388 77.743 0.64693 77.743 77.423 78.07 0 38 12 4 0 0 0 3.0369E-07 1 88605 77.506 67.039 1 8071400 1945 2667 1792 1817 2286 2286 ALVSQCNLYMAAR 13 Unmodified _ALVSQCNLYMAAR_ 0 0 0 P49589 P49589 P49589 CARS Cysteine--tRNA ligase, cytoplasmic MULTI-MSMS 210214_Eclipse_Hela_QC 748.872009277344 2 748.871053 1495.72755 1.1091 0.00083059 0.013062 9.7818E-06 1.1222 0.00084038 748.871144922794 59.131 0.44761 59.131 58.955 59.403 0 19 8 3 0 0 0 0.00027633 1 62698 71.451 54.78 1 5306200 1946 1378 1793 1818 2287 2287 ALVTGYFMQVAHLER 15 Unmodified _ALVTGYFMQVAHLER_ 0 0 0 O43143 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 MULTI-MSMS 210214_Eclipse_Hela_QC 579.305358886719 3 578.97138 1733.89231 0.78851 0.00045653 -0.53973 -0.00031249 0.24878 0.00014403 578.971125283794 85.569 0.84493 85.569 85.147 85.991 0 43 16 4 0 0 0 0.00019942 1 99513 64.394 53.338 1 5702700 1947 282 1794 1819 2288 2288 ALVTLSSGDMR 11 Unmodified _ALVTLSSGDMR_ 0 0 0 P40937 P40937 P40937 RFC5 Replication factor C subunit 5 MULTI-MSMS 210214_Eclipse_Hela_QC 575.301391601562 2 575.300255 1148.58596 1.0503 0.00060422 0.39843 0.00022922 1.4487 0.00083343 575.300572506325 50.851 0.72138 50.851 50.578 51.299 0 23 14 2 0 0 0 4.0465E-05 1 51120 103.55 65.988 1 17119000 1948 1249 1795 1820 2289 2289 ALVVEMSR 8 Unmodified _ALVVEMSR_ 0 0 0 Q96PK6 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 MULTI-MSMS 210214_Eclipse_Hela_QC 452.750335693359 2 452.74967 903.484787 0.0025391 1.1496E-06 0.045896 2.078E-05 0.048435 2.1929E-05 452.74964052124 39.028 0.83552 39.028 38.686 39.521 0 35 17 3 0 0 0 0.00036302 1 34265 130.04 88.537 1 18681000 1949 3111 1796 1821 2290 2290 ALVVPEPEPDSDSNQER 17 Unmodified _ALVVPEPEPDSDSNQER_ 0 0 0 Q5VTR2 Q5VTR2 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A MULTI-MSMS 210214_Eclipse_Hela_QC 941.947204589844 2 941.444876 1880.8752 0.89828 0.00084568 -0.30197 -0.00028429 0.59631 0.00056139 941.945652435378 52.343 0.44756 52.343 52.096 52.543 0 13 8 2 0 0 0 0.00075175 1 53241 47.288 47.288 1 2160700 1950 2381 1797 1822 2291 2291 ALWADSGIQNAYDR 14 Unmodified _ALWADSGIQNAYDR_ 0 0 0 Q14344 Q14344 Q14344 GNA13 Guanine nucleotide-binding protein subunit alpha-13 MULTI-MSMS 210214_Eclipse_Hela_QC 790.380126953125 2 790.378611 1578.74267 1.2332 0.0009747 0.57077 0.00045113 1.804 0.0014258 790.378736388586 67.681 0.44753 67.681 67.461 67.909 0 18 8 3 0 0 0 5.9909E-05 1 74670 90.653 69.19 1 6453100 1951 2082 1798 1823 2292 2292 ALWCSEDK 8 Unmodified _ALWCSEDK_ 0 0 0 Q9Y3F4 Q9Y3F4 Q9Y3F4 STRAP Serine-threonine kinase receptor-associated protein MULTI-MSMS 210214_Eclipse_Hela_QC 504.726593017578 2 504.726392 1007.43823 0.32232 0.00016268 -0.1535 -7.7474E-05 0.16882 8.5209E-05 504.726378513311 31.589 0.74535 31.589 31.271 32.017 0 37 14 3 0 0 0 0.004432 1 23632 82.716 66.422 1 25549000 1952 4070 1799 1824 2293 2293 ALWEDEGVR 9 Unmodified _ALWEDEGVR_ 0 0 0 Q5JWF2;P63092 Q5JWF2 Q5JWF2 GNAS Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(s) subunit alpha isoforms short MSMS 210214_Eclipse_Hela_QC 537.764404296875 2 537.764363 1073.51417 NaN NaN NaN NaN NaN NaN NaN 48.629 1 48.629 48.129 49.129 0 0 0 0 0.011306 1 47903 77.282 31.565 1 1953 1705 1800 1825 2294 2294 ALWEETSFQLDR 12 Unmodified _ALWEETSFQLDR_ 0 0 0 O15067 O15067 O15067 PFAS Phosphoribosylformylglycinamidine synthase MSMS 210214_Eclipse_Hela_QC 747.864624023438 2 747.864805 1493.71506 NaN NaN NaN NaN NaN NaN NaN 82.387 1 82.387 81.887 82.887 0 0 0 0 0.00010271 1 95195 98.943 78.639 1 1954 235 1801 1826 2295 2295 ALWFQGR 7 Unmodified _ALWFQGR_ 0 0 0 P43243 P43243 P43243 MATR3 Matrin-3 MULTI-MSMS 210214_Eclipse_Hela_QC 439.238189697266 2 439.237587 876.460622 0.92241 0.00040516 -0.073492 -3.2281E-05 0.84892 0.00037288 439.237525842214 55.351 1.3445 55.351 54.973 56.318 0 68 26 4 0 0 0 0.0083783 1 57213 83.229 46.642 1 17124000 1955 1288 1802 1827 2296 2296 ALWQSVQEQSAR 12 Unmodified _ALWQSVQEQSAR_ 0 0 0 Q96IR7 Q96IR7 Q96IR7 HPDL 4-hydroxyphenylpyruvate dioxygenase-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 701.858337402344 2 701.857315 1401.70008 0.98821 0.00069358 -0.95622 -0.00067113 0.031995 2.2456E-05 701.857182304437 48.245 0.72966 48.245 47.821 48.551 0 30 14 3 0 0 0 0.0010669 2 47369 65.056 50.044 1 12064000 1956 3066 1803 1828 2297;2298 2298 ALWTGALTPGR 11 Unmodified _ALWTGALTPGR_ 0 0 0 CON__Q2KJF1 CON__Q2KJF1 CON__Q2KJF1 MULTI-MSMS 210214_Eclipse_Hela_QC 571.8193359375 2 571.819473 1141.62439 0.52658 0.00030111 0.30907 0.00017673 0.83566 0.00047785 571.819427845686 66.274 0.54749 66.274 66 66.548 0 17 10 2 0 0 0 0.0073999 1 72796 51.445 38.403 1 8822300 + 1957 90 1804 1829 2299 2299 ALYALQDIVSR 11 Unmodified _ALYALQDIVSR_ 0 0 0 Q15154 Q15154 Q15154 PCM1 Pericentriolar material 1 protein MULTI-MSMS 210214_Eclipse_Hela_QC 624.850891113281 2 624.85097 1247.68739 0.57262 0.0003578 -0.063007 -3.937E-05 0.50961 0.00031843 624.851130765068 78.095 0.49826 78.095 77.871 78.369 0 19 9 3 0 0 0 0.0024023 1 89239 62.303 51.473 1 3918800 1958 2159 1805 1830 2300 2300 ALYAQAR 7 Unmodified _ALYAQAR_ 0 0 0 CON__Q9TRI1;P19823 CON__Q9TRI1 CON__Q9TRI1 ITIH2 Inter-alpha-trypsin inhibitor heavy chain H2 MULTI-MSMS 210214_Eclipse_Hela_QC 396.721557617188 2 396.72177 791.428987 -0.11115 -4.4095E-05 -0.16461 -6.5306E-05 -0.27576 -0.0001094 396.721651459534 20.837 0.64749 20.837 20.613 21.26 0 28 12 3 0 0 0 0.0018711 2 8290 120.06 69.519 1 44817000 + 1959 114 1806 1831 2301;2302 2301 ALYDTFSAFGNILSCK 16 Unmodified _ALYDTFSAFGNILSCK_ 0 0 0 Q13310;P11940 Q13310;P11940 P11940 PABPC4;PABPC1 Polyadenylate-binding protein 4;Polyadenylate-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 903.941589355469 2 903.940187 1805.86582 1.7982 0.0016254 -0.012343 -1.1158E-05 1.7858 0.0016143 903.940312557556 106.89 0.59332 106.89 106.67 107.26 0 34 11 5 0 0 0 4.1281E-38 1 129117 245.46 219.42 1 172290000 1960 842;1970 1807 1832 2303 2303 ALYDYAGQEADELSFR 16 Unmodified _ALYDYAGQEADELSFR_ 0 0 0 Q9UKS6 Q9UKS6 Q9UKS6 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 924.92919921875 2 924.425955 1846.83736 1.6347 0.0015111 0.58331 0.00053923 2.218 0.0020503 924.927935828764 84.823 0.74632 84.823 84.45 85.197 0 25 14 2 0 0 0 1.1856E-38 1 98578 195.25 183.72 1 33994000 1961 3916 1808 1833 2304 2304 ALYEAGER 8 Unmodified _ALYEAGER_ 0 0 0 P04083 P04083 P04083 ANXA1 Annexin A1 MULTI-MSMS 210214_Eclipse_Hela_QC 454.727630615234 2 454.727249 907.439946 0.35271 0.00016039 0.02318 1.054E-05 0.37589 0.00017093 454.727369256842 23.126 0.74815 23.126 22.803 23.551 0 49 14 5 0 0 0 0.0022321 1 11509 104.45 62.219 1 184760000 1962 657 1809 1834 2305 2305 ALYETELADAR 11 Unmodified _ALYETELADAR_ 0 0 0 P20700 P20700 P20700 LMNB1 Lamin-B1 MULTI-MSMS 210214_Eclipse_Hela_QC 626.314880371094 2 626.314417 1250.61428 1.3772 0.00086257 -0.0016459 -1.0308E-06 1.3756 0.00086154 626.314372214822 51.274 0.87086 51.274 50.926 51.797 0 57 17 5 0 0 0 8.2476E-06 1 51412 133.57 45.957 1 73882000 1963 983 1810 1835 2306 2306 ALYFITPTSK 10 Unmodified _ALYFITPTSK_ 0 0 0 O00186 O00186 O00186 STXBP3 Syntaxin-binding protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 570.819763183594 2 570.818607 1139.62266 0.12623 7.2052E-05 -0.049729 -2.8386E-05 0.076497 4.3666E-05 570.818463124247 64.401 0.58495 64.401 64.071 64.656 0 20 12 2 0 0 0 0.0017828 1 70088 69.812 49.113 1 5020500 1964 135 1811 1836 2307 2307 ALYLIATNGTPELQNPEK 18 Unmodified _ALYLIATNGTPELQNPEK_ 0 0 0 Q13177;Q13153 Q13177 Q13177 PAK2;PAK1 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Serine/threonine-protein kinase PAK 1 MULTI-MSMS 210214_Eclipse_Hela_QC 987.024169921875 2 986.52293 1971.03131 0.2562 0.00025275 -0.089556 -8.8349E-05 0.16665 0.0001644 987.024306250296 80.211 0.79491 80.211 79.861 80.656 0 25 15 2 0 0 0 1.2815E-05 1 92019 93.011 82.685 1 29234000 1965 1954 1812 1837 2308 2308 ALYLSDNDFEILPPDIGK 18 Unmodified _ALYLSDNDFEILPPDIGK_ 0 0 0 Q15404 Q15404 Q15404 RSU1 Ras suppressor protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1011.01977539062 2 1010.51731 2019.02007 1.1243 0.0011361 -0.2307 -0.00023313 0.8936 0.000903 1011.01870099634 106.45 0.24924 106.45 106.32 106.57 0 7 4 2 0 0 0 0.040545 1 128669 43.544 36.64 1 21930000 1966 2182 1813 1838 2309 2309 ALYPVIPR 8 Unmodified _ALYPVIPR_ 0 0 0 Q8TCS8 Q8TCS8 Q8TCS8 PNPT1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 464.784515380859 2 464.78437 927.554188 0.62011 0.00028822 -0.40578 -0.0001886 0.21433 9.9617E-05 464.784297398826 58.33 0.89553 58.33 57.761 58.656 0 35 17 3 0 0 0 0.012882 1 61474 62.714 42.159 1 11110000 1967 2798 1814 1839 2310 2310 ALYSTAMESIQGEAR 15 Unmodified _ALYSTAMESIQGEAR_ 0 0 0 A2A3N6;Q99755 A2A3N6 A2A3N6 PIPSL;PIP5K1A Putative PIP5K1A and PSMD4-like protein;Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha MULTI-MSMS 210214_Eclipse_Hela_QC 813.895812988281 2 813.893237 1625.77192 1.0378 0.00084465 0.60349 0.00049118 1.6413 0.0013358 814.394923950479 65.805 0.44785 65.805 65.552 66 0 10 8 2 0 0 0 0.0056704 1 72151 45.879 33.666 1 1776100 1968 11 1815 1840 2311 2311 ALYTFEPR 8 Unmodified _ALYTFEPR_ 0 0 0 Q92882 Q92882 Q92882 OSTF1 Osteoclast-stimulating factor 1 MULTI-MSMS 210214_Eclipse_Hela_QC 498.761413574219 2 498.761092 995.507631 0.95493 0.00047628 -0.19697 -9.8238E-05 0.75797 0.00037805 498.761162375458 50.776 0.92035 50.776 50.179 51.1 0 31 18 3 0 0 0 0.0081259 1 50717 69.998 53.845 1 8651600 1969 2915 1816 1841 2312 2312 ALYYDLISNPDIHGTYK 17 Unmodified _ALYYDLISNPDIHGTYK_ 0 0 0 CON__Q95121 CON__Q95121 CON__Q95121 MULTI-MSMS 210214_Eclipse_Hela_QC 662.00146484375 3 661.666791 1981.97854 0.9775 0.00064678 -0.017211 -1.1388E-05 0.96029 0.00063539 662.001084775867 76.201 1.1949 76.201 75.88 77.075 0 95 23 6 0 0 0 4.3278E-08 1 86390 109.35 105.69 1 97373000 + 1970 110 1817 1842 2313 2313 ALYYDLISNPDIHGTYK 17 Unmodified _ALYYDLISNPDIHGTYK_ 0 0 0 CON__Q95121 CON__Q95121 CON__Q95121 MULTI-MSMS 210214_Eclipse_Hela_QC 991.998718261719 2 991.996548 1981.97854 1.1727 0.0011633 0.64234 0.0006372 1.8151 0.0018005 992.498696753383 76.27 0.74676 76.27 75.93 76.676 0 38 14 4 0 0 0 0.00045027 1 86548 73.082 67.589 1 9445300 + 1971 110 1817 1842 2314 2314 ALYYLQIHPQELR 13 Unmodified _ALYYLQIHPQELR_ 0 0 0 Q16531 Q16531 Q16531 DDB1 DNA damage-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 548.970031738281 3 548.634985 1642.88313 0.47163 0.00025875 0.39004 0.00021399 0.86167 0.00047274 548.635199205683 68.679 0.72231 68.679 68.406 69.128 0 25 14 2 0 0 0 6.6556E-05 1 76023 84.892 72.916 1 14624000 1972 2229 1818 1843 2315 2315 AMAAVPQDVVR 11 Unmodified _AMAAVPQDVVR_ 0 0 0 Q969V3 Q969V3 Q969V3 NCLN Nicalin MULTI-MSMS 210214_Eclipse_Hela_QC 578.810607910156 2 578.81079 1155.60703 0.82182 0.00047568 0.076142 4.4072E-05 0.89796 0.00051975 578.810905907998 45.034 0.59737 45.034 44.736 45.334 0 21 11 2 0 0 0 0.0005294 1 42722 95.502 81.923 1 15038000 1973 2949 1819 1844 2316 2316 AMADALLER 9 Unmodified _AMADALLER_ 0 0 0 P34897 P34897 P34897 SHMT2 Serine hydroxymethyltransferase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 495.258728027344 2 495.257859 988.501166 0.56696 0.00028079 0.46322 0.00022941 1.0302 0.00051021 495.257910067496 51.682 1.1944 51.682 51.299 52.494 0 82 23 5 0 0 0 2.3657E-06 1 52000 147.19 89.722 1 57487000 1974 1172 1820 1845 2317 2317 AMADPEVQQIMSDPAMR 17 Oxidation (M) _AM(Oxidation (M))ADPEVQQIMSDPAMR_ AM(1)ADPEVQQIMSDPAMR AM(57)ADPEVQQIM(-57)SDPAM(-78)R 0 1 0 P31948 P31948 P31948 STIP1 Stress-induced-phosphoprotein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 953.930053710938 2 953.428803 1904.84305 1.4541 0.0013864 -0.51566 -0.00049165 0.93842 0.00089472 953.42891983053 70.799 0.64679 70.799 70.521 71.168 0 29 12 4 0 0 0 0.00024433 1 78946 79.82 73.588 3 4205800 1975 1153 1821 1846 2318 2318 303 AMADPEVQQIMSDPAMR 17 Unmodified _AMADPEVQQIMSDPAMR_ 0 0 0 P31948 P31948 P31948 STIP1 Stress-induced-phosphoprotein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 945.934814453125 2 945.431346 1888.84814 1.4129 0.0013358 -0.53774 -0.00050839 0.87514 0.00082738 945.431206153407 79.167 1.6914 79.167 78.17 79.861 0 116 33 7 0 0 0 8.1561E-12 1 90373 123.84 111.62 1 85512000 1976 1153 1821 1847 2319 2319 AMAEDLGDQDK 11 Unmodified _AMAEDLGDQDK_ 0 0 0 Q92541 Q92541 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 596.761840820312 2 596.76116 1191.50777 0.76114 0.00045422 -0.36336 -0.00021684 0.39778 0.00023738 596.760964753881 25.871 0.3974 25.871 25.711 26.108 0 12 7 2 0 0 0 0.0057178 1 15572 52.549 41.189 1 5482600 1977 2880 1822 1848 2320 2320 AMAHCGSQEALIVGGVGCNVR 21 Unmodified _AMAHCGSQEALIVGGVGCNVR_ 0 0 0 Q9NPF4 Q9NPF4 Q9NPF4 OSGEP Probable tRNA N6-adenosine threonylcarbamoyltransferase MULTI-MSMS 210214_Eclipse_Hela_QC 729.681274414062 3 729.346963 2185.01906 1.5641 0.0011408 -0.74875 -0.0005461 0.81536 0.00059468 729.346260514307 50.718 0.44732 50.718 50.479 50.926 0 33 8 5 0 0 0 0.016429 1 50793 29.276 24.066 1 6895000 1978 3586 1823 1849 2321 2321 AMAQTAIK 8 Unmodified _AMAQTAIK_ 0 0 0 Q92879 Q92879 Q92879 CELF1 CUGBP Elav-like family member 1 MULTI-MSMS 210214_Eclipse_Hela_QC 417.231201171875 2 417.231113 832.447674 0.28146 0.00011743 -0.11527 -4.8095E-05 0.16619 6.9338E-05 417.231049194646 20.339 0.34896 20.339 20.165 20.514 0 13 6 3 0 0 0 0.0027524 1 7593 98.418 49.059 1 13498000 1979 2914 1824 1850 2322 2322 AMAVLESLR 9 Unmodified _AMAVLESLR_ 0 0 0 P47897 P47897 P47897 QARS Glutamine--tRNA ligase MULTI-MSMS 210214_Eclipse_Hela_QC 495.276397705078 2 495.276052 988.537551 0.57906 0.0002868 -0.21793 -0.00010794 0.36113 0.00017886 495.276009505199 58.935 1.0939 58.935 58.557 59.651 0 38 21 3 0 0 0 4.1942E-05 1 62309 123.69 83.587 1 16775000 1980 1331 1825 1851 2323 2323 AMDDYSVIGR 10 Unmodified _AMDDYSVIGR_ 0 0 0 P57772 P57772 P57772 EEFSEC Selenocysteine-specific elongation factor MULTI-MSMS 210214_Eclipse_Hela_QC 563.763732910156 2 563.763506 1125.51246 1.0878 0.00061326 -0.50979 -0.0002874 0.57801 0.00032586 563.763138901103 50.674 0.62093 50.674 50.429 51.05 0 20 12 2 0 0 0 0.017333 1 50725 47.603 38.83 1 3873000 1981 1568 1826 1852 2324 2324 AMDEIQPDLR 10 Unmodified _AMDEIQPDLR_ 0 0 0 Q9UK41 Q9UK41 Q9UK41 VPS28 Vacuolar protein sorting-associated protein 28 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 594.290405273438 2 594.289888 1186.56522 0.84485 0.00050208 3.0917 0.0018374 3.9365 0.0023394 594.289957598452 48.829 0.82932 48.829 48.408 49.237 0 38 16 3 0 0 0 0.0004555 1 48475 87.639 75.283 1 4193100 1982 3901 1827 1853 2325 2325 AMDLAQAGSTVESK 14 Unmodified _AMDLAQAGSTVESK_ 0 0 0 Q5JTH9 Q5JTH9 Q5JTH9 RRP12 RRP12-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 704.342468261719 2 704.342849 1406.67114 0.97177 0.00068446 -0.93824 -0.00066084 0.033528 2.3615E-05 704.341475120052 43.606 0.99631 43.606 42.995 43.991 0 52 19 5 0 0 0 7.383E-15 1 40742 149.49 120.8 1 22138000 1983 2329 1828 1854 2326 2326 AMDLVQEEFLQR 12 Unmodified _AMDLVQEEFLQR_ 0 0 0 Q9HB07 Q9HB07 Q9HB07 C12orf10 UPF0160 protein MYG1, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 739.870300292969 2 739.869034 1477.72351 1.2514 0.00092586 -0.17847 -0.00013204 1.0729 0.00079381 739.869130413342 80.829 0.64588 80.829 80.458 81.103 0 23 12 2 0 0 0 0.00024391 1 92799 83 69.23 1 24647000 1984 3541 1829 1855 2327 2327 AMDPAVPNMMIDAAK 15 Unmodified _AMDPAVPNMMIDAAK_ 0 0 0 O60610 O60610 O60610 DIAPH1 Protein diaphanous homolog 1 MULTI-MSMS 210214_Eclipse_Hela_QC 787.874572753906 2 787.872404 1573.73026 1.5001 0.0011819 -1.2546 -0.00098847 0.2455 0.00019342 788.372060561661 77.56 1.1448 77.56 77.075 78.219 0 53 22 5 0 0 0 0.0012325 1 88399 53.013 43.58 1 9793400 1985 381 1830 1856 2328 2328 AMDQEITVNPQFVQK 15 Unmodified _AMDQEITVNPQFVQK_ 0 0 0 Q9UNS2 Q9UNS2 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 MULTI-MSMS 210214_Eclipse_Hela_QC 874.439697265625 2 874.437812 1746.86107 0.68688 0.00060063 0.20874 0.00018253 0.89562 0.00078316 874.93967777457 66.23 0.59749 66.23 65.901 66.498 0 43 11 5 0 0 0 0.0012325 1 72472 53.013 44.284 1 15742000 1986 3964 1831 1857 2329 2329 AMDSDWFAENYMGR 14 Unmodified _AMDSDWFAENYMGR_ 0 0 0 P55084 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase MULTI-MSMS 210214_Eclipse_Hela_QC 846.846130371094 2 846.84269 1691.67083 1.2623 0.001069 0.12216 0.00010345 1.3845 0.0011725 846.842748766936 87.431 0.9446 87.431 87.035 87.98 0 34 18 2 0 0 0 0.00012395 1 101972 80.979 74.126 1 22806000 1987 1533 1832 1858 2330 2330 AMDVYQK 7 Unmodified _AMDVYQK_ 0 0 0 P31948 P31948 P31948 STIP1 Stress-induced-phosphoprotein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 427.707153320312 2 427.707471 853.400389 -0.4887 -0.00020902 0.27155 0.00011615 -0.21715 -9.2875E-05 427.707507105386 21.965 0.59569 21.965 21.759 22.354 0 18 11 2 0 0 0 0.024279 1 9942 60.788 38.657 1 24998000 1988 1153 1833 1859 2331 2331 AMEAAQLADDLK 12 Unmodified _AMEAAQLADDLK_ 0 0 0 Q5VTR2 Q5VTR2 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A MULTI-MSMS 210214_Eclipse_Hela_QC 638.818237304688 2 638.316103 1274.61765 0.7222 0.00046099 -0.31903 -0.00020364 0.40317 0.00025735 638.316090599475 61.144 1.193 61.144 60.647 61.84 0 69 23 4 0 0 0 0.0016678 1 65151 60.518 43.887 1 32251000 1989 2381 1834 1860 2332 2332 AMEALAR 7 Unmodified _AMEALAR_ 0 0 0 Q7L014 Q7L014 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 MSMS 210214_Eclipse_Hela_QC 381.202392578125 2 381.202356 760.390159 NaN NaN NaN NaN NaN NaN NaN 23.339 1 23.339 22.839 23.839 0 0 0 0 0.00068075 1 11877 117.7 42.017 1 1990 2510 1835 1861 2333 2333 AMEAVAAQGK 10 Oxidation (M) _AM(Oxidation (M))EAVAAQGK_ AM(1)EAVAAQGK AM(120)EAVAAQGK 0 1 0 P18669;P15259 P18669 P18669 PGAM1;PGAM2 Phosphoglycerate mutase 1;Phosphoglycerate mutase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 496.247894287109 2 496.247492 990.48043 -0.2351 -0.00011667 0.13811 6.8538E-05 -0.096987 -4.8129E-05 496.247456048005 19.789 0.39799 19.789 19.568 19.966 0 14 7 3 0 0 0 2.7199E-05 1 6766 121.62 75.901 1 7234700 1991 956 1836 1862 2334 2334 244 AMEAVAAQGK 10 Unmodified _AMEAVAAQGK_ 0 0 0 P18669;P15259 P18669 P18669 PGAM1;PGAM2 Phosphoglycerate mutase 1;Phosphoglycerate mutase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 488.250244140625 2 488.250034 974.485516 -0.11065 -5.4024E-05 -0.75853 -0.00037035 -0.86917 -0.00042437 488.250041041896 19.748 0.99482 19.748 19.269 20.264 0 61 19 6 0 0 0 8.6768E-06 1 6806 123.98 92.694 1 108380000 1992 956 1836 1863 2335 2335 AMEDPGVR 8 Unmodified _AMEDPGVR_ 0 0 0 Q92616 Q92616 Q92616 GCN1L1 Translational activator GCN1 MULTI-MSMS 210214_Eclipse_Hela_QC 437.708038330078 2 437.708002 873.401452 0.053307 2.3333E-05 0.10021 4.3864E-05 0.15352 6.7196E-05 437.708100999852 21.285 0.3986 21.285 21.111 21.509 0 12 7 3 0 0 0 0.054044 1 8976 40.203 29.777 1 7236700 1993 2894 1837 1864 2336 2336 AMEGIFIK 8 Unmodified _AMEGIFIK_ 0 0 0 Q9HCN8 Q9HCN8 Q9HCN8 SDF2L1 Stromal cell-derived factor 2-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 454.749969482422 2 454.749139 907.483725 0.72289 0.00032873 -0.30536 -0.00013886 0.41753 0.00018987 454.749017336961 57.088 0.54678 57.088 56.815 57.362 0 20 10 3 0 0 0 0.012882 1 59788 62.714 19.714 1 3542300 1994 3560 1838 1865 2337 2337 AMEGIFMK 8 Unmodified _AMEGIFMK_ 0 0 0 Q99470 Q99470 Q99470 SDF2 Stromal cell-derived factor 2 MULTI-MSMS 210214_Eclipse_Hela_QC 463.727142333984 2 463.727349 925.440145 0.7904 0.00036653 -0.155 -7.1879E-05 0.6354 0.00029465 463.727200389678 53.796 0.79668 53.796 53.391 54.188 0 32 15 3 0 0 0 0.018581 1 55171 54.205 36.357 1 5995900 1995 3161 1839 1866 2338 2338 AMEGTIDGSLINPTVIVDPFQILVAANK 28 Unmodified _AMEGTIDGSLINPTVIVDPFQILVAANK_ 0 0 0 Q9Y3C4 Q9Y3C4 Q9Y3C4 TPRKB EKC/KEOPS complex subunit TPRKB MULTI-MSMS 210214_Eclipse_Hela_QC 1464.29431152344 2 1463.78335 2925.55215 3.0219 0.0044235 -1.2834 -0.0018786 1.7385 0.0025449 1464.78204318077 111.92 0.48779 111.92 111.69 112.18 0 10 9 2 0 0 0 0.0005792 1 136065 42.338 36.795 1 2457700 1996 4057 1840 1867 2339 2339 AMELLQEEDLIEEDDIPVR 19 Unmodified _AMELLQEEDLIEEDDIPVR_ 0 0 0 CON__ENSEMBL:ENSBTAP00000007350;CON__P01030 CON__ENSEMBL:ENSBTAP00000007350;CON__P01030 CON__ENSEMBL:ENSBTAP00000007350 MULTI-MSMS 210214_Eclipse_Hela_QC 1129.5537109375 2 1129.04885 2256.08314 0.84529 0.00095437 0.59907 0.00067638 1.4444 0.0016307 1129.55095846089 105.1 0.39877 105.1 104.98 105.38 0 18 7 4 0 0 0 4.7458E-57 1 126720 250.8 233.21 1 28111000 + 1997 33;47 1841 1868 2340 2340 AMEMTWNNMEK 11 Unmodified _AMEMTWNNMEK_ 0 0 0 P17480 P17480 P17480 UBTF Nucleolar transcription factor 1 MULTI-MSMS 210214_Eclipse_Hela_QC 692.788879394531 2 692.78834 1383.56213 1.1662 0.00080791 -0.64705 -0.00044827 0.51912 0.00035964 692.788167508924 55.862 0.54769 55.862 55.621 56.168 0 26 10 3 0 0 0 0.00085253 1 58176 70.908 65.92 1 5090600 1998 933 1842 1869 2341 2341 AMENIGELK 9 Unmodified _AMENIGELK_ 0 0 0 Q7L014 Q7L014 Q7L014 DDX46 Probable ATP-dependent RNA helicase DDX46 MULTI-MSMS 210214_Eclipse_Hela_QC 502.757415771484 2 502.757692 1003.50083 -0.11232 -5.6472E-05 -0.69786 -0.00035085 -0.81018 -0.00040732 502.75768932434 38.484 0.69215 38.484 38.143 38.835 0 24 13 2 0 0 0 0.0031212 1 33493 70.919 16.394 1 22831000 1999 2510 1843 1870 2342 2342 AMESTATAAVAAELVSADK 19 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AMESTATAAVAAELVSADK_ 1 0 0 P49321 P49321 P49321 NASP Nuclear autoantigenic sperm protein MULTI-MSMS 210214_Eclipse_Hela_QC 939.964538574219 2 939.461681 1876.90881 1.0091 0.00094805 -1.7795 -0.0016718 -0.7704 -0.00072376 939.461064107541 108.54 0.54667 108.54 108.36 108.9 0 37 10 6 0 0 0 8.9854E-167 2 131378 313.88 301.07 1 80572000 2000 1364 1844 1871 2343;2344 2344 AMETEVLETR 10 Unmodified _AMETEVLETR_ 0 0 0 Q9H0L4 Q9H0L4 Q9H0L4 CSTF2T Cleavage stimulation factor subunit 2 tau variant MSMS 210214_Eclipse_Hela_QC 589.789428710938 2 589.789721 1177.56489 NaN NaN NaN NaN NaN NaN NaN 42.297 1 42.297 41.797 42.797 0 0 0 0 0.029197 1 38925 53.327 40.29 1 2001 3413 1845 1872 2345 2345 AMEVDERPTEQYSDIGGLDK 20 Unmodified _AMEVDERPTEQYSDIGGLDK_ 0 0 1 P17980 P17980 P17980 PSMC3 26S protease regulatory subunit 6A MULTI-MSMS 210214_Eclipse_Hela_QC 751.685729980469 3 751.68284 2252.02669 1.1768 0.00088455 0.81625 0.00061356 1.993 0.0014981 752.017657096015 58.185 0.79618 58.185 57.86 58.656 0 73 15 6 0 0 0 3.718E-28 1 61237 159.04 145 1 79518000 2002 944 1846 1873 2346 2346 AMEVDIEERPK 11 Unmodified _AMEVDIEERPK_ 0 0 1 Q9Y3C1 Q9Y3C1 Q9Y3C1 NOP16 Nucleolar protein 16 MULTI-MSMS 210214_Eclipse_Hela_QC 439.554962158203 3 439.555344 1315.6442 0.14465 6.3581E-05 -0.68391 -0.00030062 -0.53926 -0.00023704 439.555047134973 32.625 0.62495 32.625 32.211 32.836 0 30 12 4 0 0 0 0.0018629 2 24992 67.214 62.06 1 13326000 2003 4056 1847 1874 2347;2348 2348 AMEWITAK 8 Unmodified _AMEWITAK_ 0 0 0 Q01813 Q01813 Q01813 PFKP ATP-dependent 6-phosphofructokinase, platelet type MSMS 210214_Eclipse_Hela_QC 475.244812011719 2 475.244221 948.473888 NaN NaN NaN NaN NaN NaN NaN 49.765 1 49.765 49.265 50.265 0 0 0 0 0.015446 1 49515 72.485 37.677 1 2004 1821 1848 1875 2349 2349 AMFLQPDLDSLVDFSTNNQK 20 Unmodified _AMFLQPDLDSLVDFSTNNQK_ 0 0 0 Q9BQG0 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 1142.55419921875 2 1142.05173 2282.0889 1.1837 0.0013518 -0.0021436 -2.4481E-06 1.1815 0.0013494 1142.55356918989 107.48 0.64759 107.48 107.26 107.91 0 29 12 5 0 0 0 1.2347E-49 1 129937 189.24 175.84 1 42808000 2005 3227 1849 1876 2350 2350 AMFYIGEK 8 Unmodified _AMFYIGEK_ 0 0 0 CON__Q9TT36 CON__Q9TT36 CON__Q9TT36 MSMS 210214_Eclipse_Hela_QC 479.739471435547 2 479.738771 957.462989 NaN NaN NaN NaN NaN NaN NaN 52.975 1 52.975 52.475 53.475 0 0 0 0 0.0038699 1 54042 92.47 47.525 1 + 2006 115 1850 1877 2351 2351 AMGAAQVVVTDLSATR 16 Unmodified _AMGAAQVVVTDLSATR_ 0 0 0 Q00796 Q00796 Q00796 SORD Sorbitol dehydrogenase MULTI-MSMS 210214_Eclipse_Hela_QC 795.419189453125 2 795.419422 1588.82429 0.91562 0.0007283 -0.38053 -0.00030268 0.53509 0.00042562 795.419271048217 75.178 0.5987 75.178 74.803 75.402 0 38 11 4 0 0 0 2.986E-16 1 85023 140.91 126.23 1 45497000 2007 1807 1851 1878 2352 2352 AMGGAVPFK 9 Unmodified _AMGGAVPFK_ 0 0 0 P78330 P78330 P78330 PSPH Phosphoserine phosphatase MULTI-MSMS 210214_Eclipse_Hela_QC 439.234039306641 2 439.233656 876.452759 0.15234 6.6913E-05 0.84429 0.00037084 0.99663 0.00043775 439.234040482164 37.04 0.92551 37.04 36.621 37.546 0 38 18 3 0 0 0 0.026057 1 31334 46.016 25.562 1 14852000 2008 1742 1852 1879 2353 2353 AMGIMNSFVNDIFER 15 2 Oxidation (M) _AM(Oxidation (M))GIM(Oxidation (M))NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(180)GIM(180)NSFVNDIFER 0 2 0 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q16778;P33778;P23527;P06899;Q8N257 Q99880;Q16778 Q99880 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 210214_Eclipse_Hela_QC 888.91162109375 2 888.408197 1774.80184 1.5343 0.0013631 -0.12693 -0.00011277 1.4074 0.0012504 888.408570391462 89.599 1.2916 89.599 89.213 90.505 0 119 25 6 0 0 0 3.5404E-31 3 105726 180.97 163.3 1 74347000 2009 396;710 1853 1880 2354;2355;2356 2356 56;57 AMGIMNSFVNDIFER 15 2 Oxidation (M) _AM(Oxidation (M))GIM(Oxidation (M))NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(91)GIM(91)NSFVNDIFER 0 2 0 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q16778;P33778;P23527;P06899;Q8N257 Q99880;Q16778 Q99880 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 210214_Eclipse_Hela_QC 888.910888671875 2 888.408197 1774.80184 2.206 0.0019598 -0.26582 -0.00023616 1.9402 0.0017237 888.909756523109 98.402 0.99495 98.402 97.864 98.859 0 57 19 4 0 0 0 5.6795E-05 1 117049 90.653 82.549 1 4688600 2010 396;710 1853 1880 2357 2357 56;57 AMGIMNSFVNDIFER 15 2 Oxidation (M) _AM(Oxidation (M))GIM(Oxidation (M))NSFVNDIFER_ AM(1)GIM(1)NSFVNDIFER AM(150)GIM(150)NSFVNDIFER 0 2 0 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q16778;P33778;P23527;P06899;Q8N257 Q99880;Q16778 Q99880 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 210214_Eclipse_Hela_QC 888.911193847656 2 888.408197 1774.80184 1.8298 0.0016256 -1.0204 -0.00090652 0.80937 0.00071905 888.908997150724 105.26 0.49836 105.26 105.13 105.63 0 30 9 5 0 0 0 4.6193E-16 1 127008 146.16 130.62 1 26360000 2011 396;710 1853 1880 2358 2358 56;57 AMGIMNSFVNDIFER 15 Oxidation (M) _AMGIM(Oxidation (M))NSFVNDIFER_ AMGIM(1)NSFVNDIFER AM(-80)GIM(80)NSFVNDIFER 0 1 0 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q16778;P33778;P23527;P06899;Q8N257 Q99880;Q16778 Q99880 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 210214_Eclipse_Hela_QC 880.413146972656 2 880.41074 1758.80693 1.7803 0.0015674 -0.057782 -5.0872E-05 1.7225 0.0015165 880.411373272892 98.377 1.5919 98.377 97.815 99.407 0 132 31 6 0 0 0 7.5516E-46 2 117629 209.97 209.97 2 76625000 2012 396;710 1853 1881 2359;2360 2360 56;57 AMGIMNSFVNDIFER 15 Oxidation (M) _AM(Oxidation (M))GIMNSFVNDIFER_ AM(1)GIMNSFVNDIFER AM(100)GIM(-100)NSFVNDIFER 0 1 0 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q16778;P33778;P23527;P06899;Q8N257 Q99880;Q16778 Q99880 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 210214_Eclipse_Hela_QC 880.411499023438 2 880.41074 1758.80693 1.4256 0.0012552 -1.0632 -0.00093602 0.36248 0.00031913 880.410622942038 105.25 1.3463 105.25 104.78 106.12 0 115 26 6 0 0 0 4.3505E-67 3 126792 234.3 210.63 2 655950000 2013 396;710 1853 1881 2361;2362;2363 2362 56;57 AMGIMNSFVNDIFER 15 Oxidation (M) _AM(Oxidation (M))GIMNSFVNDIFER_ AM(1)GIMNSFVNDIFER AM(52)GIM(-52)NSFVNDIFER 0 1 0 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q16778;P33778;P23527;P06899;Q8N257 Q99880;Q16778 Q99880 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 210214_Eclipse_Hela_QC 880.412475585938 2 880.41074 1758.80693 1.3588 0.0011963 -1.2689 -0.0011172 0.089835 7.9091E-05 880.410773323825 106.94 0.44775 106.94 106.71 107.16 0 22 8 4 0 0 0 2.3611E-45 1 129193 199.7 178.07 2 57322000 2014 396;710 1853 1881 2364 2364 56;57 AMGIMNSFVNDIFER 15 Unmodified _AMGIMNSFVNDIFER_ 0 0 0 Q99880;Q99879;Q99877;Q93079;Q5QNW6;P62807;P58876;P57053;O60814;Q16778;P33778;P23527;P06899;Q8N257 Q99880;Q16778 Q99880 HIST1H2BL;HIST1H2BM;HIST1H2BN;HIST1H2BH;HIST2H2BF;HIST1H2BC;HIST1H2BD;H2BFS;HIST1H2BK;HIST2H2BE;HIST1H2BB;HIST1H2BO;HIST1H2BJ;HIST3H2BB Histone H2B type 1-L;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-K;Histone H2B type 2-E;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-J;Histone H2B type 3-B MULTI-MSMS 210214_Eclipse_Hela_QC 872.414916992188 2 872.413282 1742.81201 1.4179 0.001237 -2.2032 -0.0019221 -0.78525 -0.00068506 872.412930337135 106.94 1.4442 106.94 106.71 108.16 0 94 28 8 0 0 0 1.2612E-132 3 129185 304.68 262.68 1 2523800000 2015 396;710 1853 1882 2365;2366;2367 2366 AMGNLQIDFADPSR 14 Unmodified _AMGNLQIDFADPSR_ 0 0 0 P04899 P04899 P04899 GNAI2 Guanine nucleotide-binding protein G(i) subunit alpha-2 MSMS 210214_Eclipse_Hela_QC 767.873596191406 2 767.869565 1533.72458 NaN NaN NaN NaN NaN NaN NaN 78.457 1 78.457 77.957 78.957 0 0 0 0 0.058675 1 89726 42.083 24.61 1 2016 673 1854 1883 2368 2368 AMGPLVLTEVLFNEK 15 Unmodified _AMGPLVLTEVLFNEK_ 0 0 0 P55010 P55010 P55010 EIF5 Eukaryotic translation initiation factor 5 MULTI-MSMS 210214_Eclipse_Hela_QC 830.9541015625 2 830.952566 1659.89058 1.4004 0.0011637 0.15248 0.0001267 1.5529 0.0012904 830.952851528896 108.03 0.49853 108.03 107.86 108.36 0 24 9 5 0 0 0 2.2933E-30 1 130714 169.82 157.25 1 47688000 2017 1525 1855 1884 2369 2369 AMGQGLPDEEQEK 13 Unmodified _AMGQGLPDEEQEK_ 0 0 0 Q9Y4W2 Q9Y4W2 Q9Y4W2 LAS1L Ribosomal biogenesis protein LAS1L MULTI-MSMS 210214_Eclipse_Hela_QC 716.326110839844 2 716.324656 1430.63476 0.51425 0.00036837 0.14038 0.00010056 0.65463 0.00046893 716.324932106195 30.883 0.44889 30.883 30.573 31.022 0 22 8 4 0 0 0 0.00020146 1 22646 79.07 68.838 1 8694100 2018 4094 1856 1885 2370 2370 AMGVVVATGVNTEIGK 16 Unmodified _AMGVVVATGVNTEIGK_ 0 0 0 P16615 P16615 P16615 ATP2A2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 MULTI-SECPEP 210214_Eclipse_Hela_QC 773.890808105469 2 773.418891 1544.82323 1.0144 0.00078458 0.23108 0.00017872 1.2455 0.0009633 773.418830389501 64.683 1.2927 64.683 64.359 65.652 0 68 26 4 0 0 0 4.3838E-13 1 70561 131.43 124.54 1 14367000 2019 922 1857 1886 2371 2371 AMGYQPLVTMDDAMER 16 Unmodified _AMGYQPLVTMDDAMER_ 0 0 0 Q15738 Q15738 Q15738 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating MULTI-MSMS 210214_Eclipse_Hela_QC 914.9111328125 2 914.40734 1826.80013 1.3261 0.0012126 -0.03864 -3.5333E-05 1.2875 0.0011773 914.407273222868 82.691 0.56193 82.691 82.444 83.006 0 27 12 3 0 0 0 0.00013102 1 95541 78.096 71.856 1 7685000 2020 2210 1858 1887 2372 2372 AMHQAQTMEGCSSPMVVK 18 Unmodified _AMHQAQTMEGCSSPMVVK_ 0 0 0 Q92879 Q92879 Q92879 CELF1 CUGBP Elav-like family member 1 MULTI-MSMS 210214_Eclipse_Hela_QC 664.966125488281 3 664.631712 1990.87331 0.75774 0.00050362 -1.1703 -0.00077783 -0.41258 -0.00027421 664.965719380342 32.142 0.79199 32.142 31.868 32.66 0 46 15 5 0 0 0 0.0001018 1 24465 39.98 36.539 1 19844000 2021 2914 1859 1888 2373 2373 AMKPPGGESSNLFGSPEEATPSSRPNR 27 Unmodified _AMKPPGGESSNLFGSPEEATPSSRPNR_ 0 0 2 Q9H910 Q9H910 Q9H910 HN1L Hematological and neurological expressed 1-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 701.340393066406 4 700.838428 2799.3246 0.87991 0.00061667 -0.39804 -0.00027896 0.48187 0.00033771 701.088966264629 44.191 0.9445 44.191 43.742 44.687 0 93 18 7 0 0 0 9.1453E-08 1 41526 82.849 77.482 1 38441000 2022 3513 1860 1889 2374 2374 AMLDELAMETLQEK 14 Unmodified _AMLDELAMETLQEK_ 0 0 0 Q4V328 Q4V328 Q4V328 GRIPAP1 GRIP1-associated protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 811.396057128906 2 811.394224 1620.77389 1.3236 0.001074 -1.0108 -0.00082014 0.31281 0.00025381 811.894116184896 97.044 1.0444 97.044 96.273 97.318 0 40 20 4 0 0 0 0.0004093 1 115457 66.595 56.072 1 3965900 2023 2291 1861 1890 2375 2375 AMLDQLMGTSR 11 Unmodified _AMLDQLMGTSR_ 0 0 0 Q9Y383 Q9Y383 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 MULTI-MSMS 210214_Eclipse_Hela_QC 612.304321289062 2 611.799565 1221.58458 0.71665 0.00043845 -0.18592 -0.00011374 0.53074 0.0003247 611.799734693107 70.318 0.84582 70.318 69.974 70.82 0 59 16 5 0 0 0 0.00047015 1 78232 81.263 60.292 1 40417000 2024 4041 1862 1891 2376 2376 AMLEAQQEALEELQLESPK 19 Unmodified _AMLEAQQEALEELQLESPK_ 0 0 0 Q9NQ50 Q9NQ50 Q9NQ50 MRPL40 39S ribosomal protein L40, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1079.04113769531 2 1079.04083 2156.0671 1.2571 0.0013564 1.3537 0.0014607 2.6107 0.0028171 1079.04237474853 95.383 0.82182 95.383 95.074 95.896 0 53 16 5 0 0 0 1.2543E-05 1 113017 83.617 74.797 1 6353100 2025 3593 1863 1892 2377 2377 AMLESIGVPLEK 12 Unmodified _AMLESIGVPLEK_ 0 0 0 P54577 P54577 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 643.856140136719 2 643.854864 1285.69517 0.91778 0.00059092 -0.15932 -0.00010258 0.75847 0.00048834 643.854847257305 75.979 0.92551 75.979 75.601 76.527 0 41 18 3 0 0 0 0.0005432 1 86050 69.01 62.42 1 59586000 2026 1515 1864 1893 2378 2378 AMLNNVVRPR 10 Unmodified _AMLNNVVRPR_ 0 0 1 Q9BUP3 Q9BUP3 Q9BUP3 HTATIP2 Oxidoreductase HTATIP2 MULTI-MSMS 210214_Eclipse_Hela_QC 390.557189941406 3 390.557242 1168.6499 0.42724 0.00016686 -0.50527 -0.00019734 -0.078023 -3.0472E-05 390.557041063861 28.088 0.49525 28.088 27.892 28.388 0 21 9 3 0 0 0 0.0047389 1 18747 53.327 40.751 1 9937000 2027 3295 1865 1894 2379 2379 AMLSANIR 8 Unmodified _AMLSANIR_ 0 0 0 Q00610 Q00610 Q00610 CLTC Clathrin heavy chain 1 MULTI-MSMS 210214_Eclipse_Hela_QC 438.241943359375 2 438.242012 874.469472 0.046932 2.0568E-05 -0.35199 -0.00015426 -0.30506 -0.00013369 438.241835669224 34.054 0.59668 34.054 33.718 34.314 0 27 11 3 0 0 0 0.00020231 1 27050 138.85 97.346 1 26632000 2028 1802 1866 1895 2380 2380 AMLSGPGQFAENETNEVNFR 20 Unmodified _AMLSGPGQFAENETNEVNFR_ 0 0 0 Q15369 Q15369 Q15369 TCEB1 Transcription elongation factor B polypeptide 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1106.01159667969 2 1106.01039 2210.00623 1.347 0.0014898 0.037782 4.1787E-05 1.3848 0.0015316 1106.51213749769 77.548 0.74591 77.548 77.224 77.97 0 66 14 6 0 0 0 1.2274E-49 1 88268 189.3 182.68 1 40218000 2029 2176 1867 1896 2381 2381 AMLSYVWPK 9 Unmodified _AMLSYVWPK_ 0 0 0 O75027 O75027 O75027 ABCB7 ATP-binding cassette sub-family B member 7, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 547.790161132812 2 547.788795 1093.56304 0.94018 0.00051502 -0.27732 -0.00015191 0.66286 0.00036311 547.788708983096 74.577 0.69475 74.577 74.158 74.853 0 30 13 3 0 0 0 0.0081187 1 84077 57.177 50.728 1 4015300 2030 415 1868 1897 2382 2382 AMLTAVDWTLTK 12 Unmodified _AMLTAVDWTLTK_ 0 0 0 Q9HD20 Q9HD20 Q9HD20 ATP13A1 Manganese-transporting ATPase 13A1 MULTI-MSMS 210214_Eclipse_Hela_QC 675.361145019531 2 675.360313 1348.70607 1.017 0.00068683 0.046018 3.1079E-05 1.063 0.00071791 675.360417799816 86.388 0.49706 86.388 86.091 86.588 0 20 9 3 0 0 0 0.001679 1 100591 60.434 48.944 1 3522500 2031 3566 1869 1898 2383 2383 AMLWLSEK 8 Unmodified _AMLWLSEK_ 0 0 0 P17858 P17858 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type MULTI-MSMS 210214_Eclipse_Hela_QC 489.260101318359 2 489.259871 976.505189 0.4949 0.00024213 0.033452 1.6367E-05 0.52835 0.0002585 489.25984847419 62.985 0.64639 62.985 62.678 63.324 0 29 12 3 0 0 0 0.01237 1 68077 63.48 47.277 1 8300000 2032 942 1870 1899 2384 2384 AMMYSGELK 9 Unmodified _AMMYSGELK_ 0 0 0 P12268 P12268 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 515.240295410156 2 515.240821 1028.46709 -0.1738 -8.9549E-05 0.25971 0.00013381 0.085912 4.4266E-05 515.240962772176 38.675 0.64248 38.675 38.292 38.935 0 29 12 3 0 0 0 0.0041499 1 33628 67.494 51.646 1 44047000 2033 848 1871 1900 2385 2385 AMNGESLDGR 10 Unmodified _AMNGESLDGR_ 0 0 0 P98179 P98179 P98179 RBM3 RNA-binding protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 525.23779296875 2 525.237655 1048.46076 0.015123 7.9432E-06 0.079617 4.1818E-05 0.09474 4.9761E-05 525.237819355014 22.783 0.69759 22.783 22.603 23.301 0 25 13 3 0 0 0 3.3865E-25 2 11094 204.27 155.17 1 47596000 2034 1790 1872 1901 2386;2387 2387 AMNQQTTLDTPQLER 15 Unmodified _AMNQQTTLDTPQLER_ 0 0 0 O95071 O95071 O95071 UBR5 E3 ubiquitin-protein ligase UBR5 MULTI-MSMS 210214_Eclipse_Hela_QC 873.430236816406 2 873.427975 1744.8414 1.186 0.0010359 0.69275 0.00060507 1.8787 0.0016409 873.429077190321 49.676 0.34519 49.676 49.536 49.881 0 14 6 3 0 0 0 0.004794 1 49414 47.288 41.185 1 2954600 2035 532 1873 1902 2388 2388 AMNWMSGK 8 Unmodified _AMNWMSGK_ 0 0 0 P08237 P08237 P08237 PFKM ATP-dependent 6-phosphofructokinase, muscle type MULTI-MSMS 210214_Eclipse_Hela_QC 462.706817626953 2 462.706948 923.399343 -0.2538 -0.00011743 0.21689 0.00010036 -0.036904 -1.7076E-05 462.706997479162 36.019 0.73169 36.019 35.69 36.421 0 23 14 2 0 0 0 0.056536 1 29921 39.253 13.426 1 8613800 2036 744 1874 1903 2389 2389 AMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTR 38 Unmodified _AMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTR_ 0 0 0 P26368 P26368 P26368 U2AF2 Splicing factor U2AF 65 kDa subunit MULTI-MSMS 210214_Eclipse_Hela_QC 1264.33581542969 3 1263.6631 3787.96747 2.5899 0.0032728 2.8732 0.0036308 5.4631 0.0069036 1264.33543687406 108.31 0.54699 108.31 108.16 108.7 0 39 10 6 0 0 0 1.8295E-09 1 131102 55.084 47.826 1 30698000 2037 1057 1875 1904 2390 2390 AMQADISQAAQILSSDPSR 19 Unmodified _AMQADISQAAQILSSDPSR_ 0 0 0 P42166 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin MULTI-MSMS 210214_Eclipse_Hela_QC 994.989624023438 2 994.988928 1987.9633 0.83602 0.00083183 0.028112 2.7971E-05 0.86413 0.0008598 994.989204005269 86.657 0.74535 86.657 86.29 87.035 0 46 14 5 0 0 0 2.2162E-05 1 100921 104.95 89.793 1 20107000 2038 1266 1876 1905 2391 2391 AMQEALAK 8 Unmodified _AMQEALAK_ 0 0 0 O60841 O60841 O60841 EIF5B Eukaryotic translation initiation factor 5B MULTI-MSMS 210214_Eclipse_Hela_QC 431.228149414062 2 431.228571 860.442588 -0.0095039 -4.0984E-06 0.40231 0.00017349 0.39281 0.00016939 431.228716685062 21.435 0.44839 21.435 21.111 21.559 0 14 8 2 0 0 0 0.0036917 1 9163 85.265 44.579 1 15447000 2039 401 1877 1906 2392 2392 AMQGLTGR 8 Unmodified _AMQGLTGR_ 0 0 0 P26368 P26368 P26368 U2AF2 Splicing factor U2AF 65 kDa subunit MULTI-MSMS 210214_Eclipse_Hela_QC 417.218627929688 2 417.218537 832.422522 0.055848 2.3301E-05 0.042946 1.7918E-05 0.098794 4.1219E-05 417.218570937836 22.094 0.49651 22.094 21.957 22.454 0 15 9 2 0 0 0 0.010633 1 10158 66.073 17.958 1 26867000 2040 1057 1878 1907 2393 2393 AMQRPETAATLK 12 Unmodified _AMQRPETAATLK_ 0 0 1 P82932 P82932 P82932 MRPS6 28S ribosomal protein S6, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 658.853759765625 2 658.853187 1315.69182 0.45538 0.00030003 -0.11306 -7.4493E-05 0.34232 0.00022554 658.853379998803 22.175 0.29762 22.175 22.007 22.305 0 11 5 3 0 0 0 0.016762 1 10195 65.278 32.863 1 11302000 2041 1770 1879 1908 2394 2394 AMSEVTSLHEDDWR 14 Unmodified _AMSEVTSLHEDDWR_ 0 0 0 Q86X29 Q86X29 Q86X29 LSR Lipolysis-stimulated lipoprotein receptor MULTI-MSMS 210214_Eclipse_Hela_QC 559.251892089844 3 559.250871 1674.73078 0.4899 0.00027398 0.29893 0.00016718 0.78883 0.00044115 559.585280169561 49.906 0.54411 49.906 49.635 50.179 0 17 10 2 0 0 0 0.0060664 1 49690 32.523 30.03 1 4354400 2042 2597 1880 1909 2395 2395 AMSFEWPWQYR 11 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AMSFEWPWQYR_ 1 0 0 Q9BRG1 Q9BRG1 Q9BRG1 VPS25 Vacuolar protein-sorting-associated protein 25 MULTI-MSMS 210214_Eclipse_Hela_QC 771.847839355469 2 771.845361 1541.67617 1.9476 0.0015032 -0.19717 -0.00015219 1.7504 0.001351 772.346474261435 110.67 0.1997 110.67 110.55 110.75 0 9 3 3 0 0 0 0.005787 1 134353 48.283 41.43 1 3004700 2043 3234 1881 1910 2396 2396 AMSLVSNEGEGEQNEIR 17 Unmodified _AMSLVSNEGEGEQNEIR_ 0 0 0 Q14573 Q14573 Q14573 ITPR3 Inositol 1,4,5-trisphosphate receptor type 3 MULTI-MSMS 210214_Eclipse_Hela_QC 932.432006835938 2 931.931079 1861.84761 1.2533 0.001168 -0.46062 -0.00042927 0.79271 0.00073875 931.930626001798 49.112 0.49826 49.112 48.839 49.337 0 27 9 4 0 0 0 1.182E-07 1 48553 107.09 101.24 1 10388000 2044 2093 1882 1911 2397 2397 AMSLVSSDSEGEQNELR 17 Unmodified _AMSLVSSDSEGEQNELR_ 0 0 0 Q14643 Q14643 Q14643 ITPR1 Inositol 1,4,5-trisphosphate receptor type 1 MULTI-MSMS 210214_Eclipse_Hela_QC 926.925048828125 2 926.423087 1850.83162 1.0343 0.00095816 -0.3715 -0.00034417 0.66275 0.00061399 926.422627518499 52.347 0.49731 52.347 52.046 52.543 0 21 9 3 0 0 0 4.08E-05 2 53081 85.813 83.872 1 4496000 2045 2094 1883 1912 2398;2399 2398 AMSQDGASQFQEVIR 15 Unmodified _AMSQDGASQFQEVIR_ 0 0 0 Q16851 Q16851 Q16851 UGP2 UTP--glucose-1-phosphate uridylyltransferase MULTI-MSMS 210214_Eclipse_Hela_QC 834.398254394531 2 833.896311 1665.77807 0.99513 0.00082984 -0.078965 -6.5849E-05 0.91617 0.00076399 833.896329526414 59.323 0.5463 59.323 59.055 59.601 0 29 10 4 0 0 0 5.0094E-05 1 62905 107.18 89.311 1 7830800 2046 2259 1884 1913 2400 2400 AMSSGGSGGGVPEQEDSVLFR 21 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AMSSGGSGGGVPEQEDSVLFR_ 1 0 0 Q16637 Q16637 Q16637 SMN1 Survival motor neuron protein MULTI-MSMS 210214_Eclipse_Hela_QC 1055.48693847656 2 1054.9813 2107.94805 1.514 0.0015972 0.14973 0.00015796 1.6637 0.0017552 1055.48280046772 91.734 1.0439 91.734 91.052 92.096 0 53 20 4 0 0 0 7.2191E-10 1 108023 106.13 91.254 1 5990300 2047 2241 1885 1914 2401 2401 AMSTLVPQGGPVLCR 15 Unmodified _AMSTLVPQGGPVLCR_ 0 0 0 O94776 O94776 O94776 MTA2 Metastasis-associated protein MTA2 MULTI-MSMS 210214_Eclipse_Hela_QC 793.413513183594 2 793.413085 1584.81162 1.4526 0.0011525 -0.24311 -0.00019289 1.2095 0.00095961 793.412860576015 67.735 0.69562 67.735 67.461 68.157 0 25 13 2 0 0 0 0.00085468 1 74673 72.643 47.257 1 15874000 2048 513 1886 1915 2402 2402 AMSTTSISSPQPGK 14 Unmodified _AMSTTSISSPQPGK_ 0 0 0 Q9UJU6 Q9UJU6 Q9UJU6 DBNL Drebrin-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 696.346313476562 2 696.345391 1390.67623 0.64334 0.00044799 -0.69935 -0.00048699 -0.056013 -3.9004E-05 696.345019762103 28.751 0.79335 28.751 28.338 29.131 0 39 16 4 0 0 0 0.00011424 1 19743 82.171 67.964 1 14196000 2049 3896 1887 1916 2403 2403 AMTEDGFLAVCSEAK 15 Unmodified _AMTEDGFLAVCSEAK_ 0 0 0 P08243 P08243 P08243 ASNS Asparagine synthetase [glutamine-hydrolyzing] MULTI-MSMS 210214_Eclipse_Hela_QC 815.370300292969 2 814.868373 1627.72219 0.37261 0.00030363 -0.80576 -0.00065659 -0.43315 -0.00035296 814.868272806783 67.27 0.71408 67.27 66.946 67.66 0 54 14 5 0 0 0 4.6048E-07 1 73930 107.18 101.57 1 51849000 2050 747 1888 1917 2404 2404 AMTLMEYLIK 10 Unmodified _AMTLMEYLIK_ 0 0 0 Q9Y6I3 Q9Y6I3 Q9Y6I3 EPN1 Epsin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 606.822265625 2 606.821978 1211.6294 1.3581 0.00082413 -0.20781 -0.0001261 1.1503 0.00069803 606.822195222825 98.305 0.54726 98.305 98.063 98.61 0 29 10 4 0 0 0 0.01092 1 117188 58.676 52.934 1 2727000 2051 4155 1889 1918 2405 2405 AMTLQEAEAFVGAER 15 Unmodified _AMTLQEAEAFVGAER_ 0 0 0 O15031 O15031 O15031 PLXNB2 Plexin-B2 MULTI-MSMS 210214_Eclipse_Hela_QC 812.398376464844 2 811.89578 1621.77701 1.0928 0.00088723 0.62155 0.00050463 1.7143 0.0013919 812.397801662053 88.083 0.44817 88.083 87.731 88.179 0 19 8 3 0 0 0 9.3447E-05 1 102945 103.34 93.388 1 4280800 2052 233 1890 1919 2406 2406 AMVASGSELGK 11 Unmodified _AMVASGSELGK_ 0 0 0 P54819 P54819 P54819 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 525.268493652344 2 525.268424 1048.5223 -0.40277 -0.00021156 0.078827 4.1406E-05 -0.32394 -0.00017016 525.268481419072 26.183 0.54798 26.183 25.959 26.507 0 18 10 2 0 0 0 0.00023731 1 15890 89.886 70.109 1 85136000 2053 1521 1891 1920 2407 2407 AMVDPAQTVEQR 12 Unmodified _AMVDPAQTVEQR_ 0 0 0 P50416 P50416 P50416 CPT1A Carnitine O-palmitoyltransferase 1, liver isoform MULTI-MSMS 210214_Eclipse_Hela_QC 673.334167480469 2 672.832451 1343.65035 0.95628 0.00064342 -0.70311 -0.00047308 0.25317 0.00017034 672.832294203697 41.623 0.59629 41.623 41.307 41.904 0 37 11 4 0 0 0 2.0726E-08 1 37779 129.85 121.81 1 26075000 2054 1413 1892 1921 2408 2408 AMVEEMQGHLK 11 Unmodified _AMVEEMQGHLK_ 0 0 0 Q9Y4P3 Q9Y4P3 Q9Y4P3 TBL2 Transducin beta-like protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 636.807983398438 2 636.80739 1271.60023 0.85481 0.00054435 0.12344 7.8607E-05 0.97825 0.00062296 636.807647418524 30.598 0.44898 30.598 30.374 30.823 0 12 8 2 0 0 0 0.00027581 1 22300 87.476 67.147 1 5192000 2055 4091 1893 1922 2409 2409 AMVEYEIDLQK 11 Unmodified _AMVEYEIDLQK_ 0 0 0 P09874 P09874 P09874 PARP1 Poly [ADP-ribose] polymerase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 669.83544921875 2 669.834128 1337.6537 1.3894 0.00093068 0.25589 0.0001714 1.6453 0.0011021 669.8342098233 65.385 1.2451 65.385 65.054 66.299 0 63 24 4 0 0 0 0.00056053 1 71348 78.816 68.292 1 25807000 2056 784 1894 1923 2410 2410 AMVLDLR 7 Unmodified _AMVLDLR_ 0 0 0 Q9UL46 Q9UL46 Q9UL46 PSME2 Proteasome activator complex subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 409.2333984375 2 409.233656 816.452759 0.60265 0.00024662 0.087247 3.5704E-05 0.6899 0.00028233 409.233663472714 53.961 0.74461 53.961 53.541 54.285 0 33 14 3 0 0 0 0.0064961 1 55174 90.986 48.212 1 25666000 2057 3927 1895 1924 2411 2411 AMVSNAQLDNEK 12 Unmodified _AMVSNAQLDNEK_ 0 0 0 Q32MZ4;Q9Y608 Q32MZ4;Q9Y608 Q32MZ4 LRRFIP1;LRRFIP2 Leucine-rich repeat flightless-interacting protein 1;Leucine-rich repeat flightless-interacting protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 660.317016601562 2 660.316634 1318.61871 0.54388 0.00035913 -0.49946 -0.0003298 0.044426 2.9335E-05 660.316537343059 26.701 0.49816 26.701 26.507 27.005 0 26 9 4 0 0 0 8.5746E-14 1 16619 154.85 135.58 1 15034000 2058 2272;4131 1896 1925 2412 2412 AMWPDGQQDITEVTK 15 Unmodified _AMWPDGQQDITEVTK_ 0 0 0 B0I1T2 B0I1T2 B0I1T2 MYO1G Unconventional myosin-Ig;Minor histocompatibility antigen HA-2 MSMS 210214_Eclipse_Hela_QC 859.906921386719 2 859.906344 1717.79814 NaN NaN NaN NaN NaN NaN NaN 70.34 1 70.34 69.84 70.84 0 0 0 0 0.010705 1 78418 51.013 42.909 1 2059 27 1897 1926 2413 2413 AMYPDYFAK 9 Unmodified _AMYPDYFAK_ 0 0 0 Q9Y6M9 Q9Y6M9 Q9Y6M9 NDUFB9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 MULTI-MSMS 210214_Eclipse_Hela_QC 553.255126953125 2 553.254785 1104.49502 0.46461 0.00025705 -0.61127 -0.00033819 -0.14667 -8.1143E-05 553.255097470471 58.743 0.74615 58.743 58.358 59.104 0 43 14 4 0 0 0 0.0087523 1 61963 55.531 44.702 1 12920000 2060 4163 1898 1927 2414 2414 ANAEYMSPSGK 11 Unmodified _ANAEYMSPSGK_ 0 0 0 O75431 O75431 O75431 MTX2 Metaxin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 577.76171875 2 577.760963 1153.50737 0.43557 0.00025166 -0.17278 -9.9826E-05 0.26279 0.00015183 577.760978390093 22.316 0.29764 22.316 22.156 22.454 0 13 5 3 0 0 0 0.00037342 1 10410 83.883 77.62 1 4946400 2061 454 1899 1928 2415 2415 ANALHATNNLQIIPDFSLK 19 Unmodified _ANALHATNNLQIIPDFSLK_ 0 0 0 Q9P2R3 Q9P2R3 Q9P2R3 ANKFY1 Rabankyrin-5 MULTI-MSMS 210214_Eclipse_Hela_QC 694.379821777344 3 694.044373 2079.11129 0.80954 0.00056186 -0.17399 -0.00012076 0.63555 0.0004411 694.044411456541 86.711 0.69546 86.711 86.439 87.134 0 25 13 3 0 0 0 0.022911 1 101126 27.376 23.988 1 6707200 2062 3806 1900 1929 2416 2416 ANAMLDEDEDERVDEAALR 19 Unmodified _ANAMLDEDEDERVDEAALR_ 0 0 1 Q9BSL1 Q9BSL1 Q9BSL1 UBAC1 Ubiquitin-associated domain-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 721.660522460938 3 721.327057 2160.95934 0.55718 0.00040191 -0.27352 -0.0001973 0.28366 0.00020461 721.661330720205 56.387 0.39827 56.387 56.168 56.567 0 16 7 3 0 0 0 0.00030748 1 58877 45.257 41.868 1 4543500 2063 3260 1901 1930 2417 2417 ANAQAAALYK 10 Unmodified _ANAQAAALYK_ 0 0 0 P40121 P40121 P40121 CAPG Macrophage-capping protein MULTI-MSMS 210214_Eclipse_Hela_QC 510.777435302734 2 510.777274 1019.53999 0.08754 4.4714E-05 0.23324 0.00011914 0.32078 0.00016385 510.777298960897 24.542 0.69346 24.542 24.172 24.865 0 35 13 4 0 0 0 4.4453E-07 1 13687 135.77 100.27 1 57284000 2064 1236 1902 1931 2418 2418 ANCIDSTASAEAVFASEVK 19 Unmodified _ANCIDSTASAEAVFASEVK_ 0 0 0 P22087 P22087 P22087 FBL rRNA 2-O-methyltransferase fibrillarin MULTI-MSMS 210214_Eclipse_Hela_QC 985.963745117188 2 985.462212 1968.90987 0.57206 0.00056374 -0.0053152 -5.2379E-06 0.56674 0.0005585 985.963902643798 79.972 1.4416 79.972 79.562 81.004 0 87 28 5 0 0 0 0.00030101 1 91543 68.044 66.673 1 59844000 2065 1005 1903 1932 2419 2419 ANCSDNEFTQALTAAIPPESLTR 23 Unmodified _ANCSDNEFTQALTAAIPPESLTR_ 0 0 0 Q16891 Q16891 Q16891 IMMT MICOS complex subunit MIC60 MULTI-MSMS 210214_Eclipse_Hela_QC 1254.10363769531 2 1253.59756 2505.18057 2.3487 0.0029443 -0.12526 -0.00015703 2.2234 0.0027873 1254.09914940066 102.89 1.1928 102.89 102.44 103.63 0 95 23 6 0 0 0 1.204E-06 2 123228 78.285 73.484 1 19802000 2066 2262 1904 1933 2420;2421 2420 ANDDIIVNWVNR 12 Unmodified _ANDDIIVNWVNR_ 0 0 0 P13797 P13797 P13797 PLS3 Plastin-3 MULTI-MSMS 210214_Eclipse_Hela_QC 714.866271972656 2 714.86514 1427.71573 1.0505 0.00075098 0.21933 0.00015679 1.2699 0.00090777 714.865346365802 80.788 0.89419 80.788 80.408 81.302 0 59 17 5 0 0 0 4.1253E-05 1 92691 123.86 114.91 1 63639000 2067 865 1905 1934 2422 2422 ANDDLADAGLEK 12 Unmodified _ANDDLADAGLEK_ 0 0 0 Q9HB90;Q9NQL2 Q9HB90 Q9HB90 RRAGC;RRAGD Ras-related GTP-binding protein C;Ras-related GTP-binding protein D MSMS 210214_Eclipse_Hela_QC 616.29296875 2 616.293682 1230.57281 NaN NaN NaN NaN NaN NaN NaN 38.921 1 38.921 38.421 39.421 0 0 0 0 0.019245 1 34129 50.95 29.65 1 2068 3546 1906 1935 2423 2423 ANDDVAQEIAER 12 Unmodified _ANDDVAQEIAER_ 0 0 0 Q8NBL1 Q8NBL1 Q8NBL1 POGLUT1 Protein O-glucosyltransferase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 665.818664550781 2 665.815313 1329.61607 0.95722 0.00063733 0.17045 0.00011349 1.1277 0.00075082 665.81746580905 41.851 0.49443 41.851 41.556 42.05 0 30 9 5 0 0 0 0.00041019 1 38364 85.958 75.726 1 6359800 2069 2730 1907 1936 2424 2424 ANDLTHSLSSYLK 13 Unmodified _ANDLTHSLSSYLK_ 0 0 0 Q9BQ75 Q9BQ75 Q9BQ75 CMSS1 Protein CMSS1 MULTI-MSMS 210214_Eclipse_Hela_QC 483.584045410156 3 483.584179 1447.73071 0.41027 0.0001984 -0.20701 -0.0001001 0.20327 9.8297E-05 483.584081889628 62.879 0.59637 62.879 62.578 63.174 0 20 11 2 0 0 0 0.055405 1 67811 23.362 13.173 1 6850100 2070 3221 1908 1937 2425 2425 ANDQEPCGWWLAK 13 Unmodified _ANDQEPCGWWLAK_ 0 0 0 P51114 P51114 P51114 FXR1 Fragile X mental retardation syndrome-related protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 787.855895996094 2 787.856457 1573.69836 1.1257 0.00088688 0.24112 0.00018997 1.3668 0.0010768 787.856453861149 71.566 0.89719 71.566 70.919 71.816 0 40 17 3 0 0 0 0.029428 1 79900 40.154 18.903 1 11909000 2071 1432 1909 1938 2426 2426 ANDTQEFNLSAYFER 15 Unmodified _ANDTQEFNLSAYFER_ 0 0 0 P51452 P51452 P51452 DUSP3 Dual specificity protein phosphatase 3 MULTI-MSMS 210214_Eclipse_Hela_QC 902.912719726562 2 902.910473 1803.80639 1.4703 0.0013275 0.69407 0.00062669 2.1644 0.0019542 903.412576907426 92.021 0.59717 92.021 91.748 92.345 0 28 11 3 0 0 0 0.037379 1 108578 32.946 24.433 1 3682600 2072 1440 1910 1939 2427 2427 ANDTTFGLAAGVFTR 15 Unmodified _ANDTTFGLAAGVFTR_ 0 0 0 P49189 P49189 P49189 ALDH9A1 4-trimethylaminobutyraldehyde dehydrogenase MULTI-MSMS 210214_Eclipse_Hela_QC 770.892639160156 2 770.891355 1539.76816 1.019 0.00078555 0.25866 0.0001994 1.2777 0.00098495 770.891374749156 86.757 0.84483 86.757 86.389 87.234 0 50 16 4 0 0 0 2.0035E-06 2 100995 101.6 78.875 1 31652000 2073 1360 1911 1940 2428;2429 2428 ANEAYPCPCDIGHR 14 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ANEAYPCPCDIGHR_ 1 0 0 Q96DG6 Q96DG6 Q96DG6 CMBL Carboxymethylenebutenolidase homolog MULTI-MSMS 210214_Eclipse_Hela_QC 851.861755371094 2 851.359038 1700.70352 0.93855 0.00079904 -0.45926 -0.000391 0.47929 0.00040805 851.359052278117 51.971 0.9459 51.971 51.498 52.444 0 68 18 5 0 0 0 2.9828E-05 1 52354 90.05 88.297 1 51066000 2074 2999 1912 1941 2430 2430 ANEDAVPLCMSADFPR 16 Unmodified _ANEDAVPLCMSADFPR_ 0 0 0 Q9C0B1 Q9C0B1 Q9C0B1 FTO Alpha-ketoglutarate-dependent dioxygenase FTO MULTI-MSMS 210214_Eclipse_Hela_QC 896.904357910156 2 896.903279 1791.792 1.3652 0.0012245 0.23705 0.00021261 1.6023 0.0014371 896.903587062248 81.724 0.54612 81.724 81.452 81.998 0 30 10 4 0 0 0 0.048964 1 94225 30.059 16.153 1 5556100 2075 3380 1913 1942 2431 2431 ANEFLEVGK 9 Unmodified _ANEFLEVGK_ 0 0 0 Q14152 Q14152 Q14152 EIF3A Eukaryotic translation initiation factor 3 subunit A MULTI-MSMS 210214_Eclipse_Hela_QC 503.763977050781 2 503.763832 1005.51311 0.40022 0.00020162 -0.1412 -7.1131E-05 0.25902 0.00013049 503.763944111033 44.901 0.84599 44.901 44.488 45.334 0 27 16 2 0 0 0 0.00051242 1 42574 100.02 59.95 1 10187000 2076 2059 1914 1943 2432 2432 ANENSNIQVLSER 13 Unmodified _ANENSNIQVLSER_ 0 0 0 Q6UN15 Q6UN15 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 MULTI-MSMS 210214_Eclipse_Hela_QC 737.368713378906 2 737.368244 1472.72193 0.89896 0.00066286 -0.016186 -1.1935E-05 0.88277 0.00065093 737.368322071075 39.801 0.58878 39.801 39.475 40.064 0 24 11 3 0 0 0 0.0002792 1 35184 71.159 53.723 1 10561000 2077 2474 1915 1944 2433 2433 ANEPTHFTVDCTEAGEGDVSVGIK 24 Unmodified _ANEPTHFTVDCTEAGEGDVSVGIK_ 0 0 0 O75369 O75369 O75369 FLNB Filamin-B MULTI-MSMS 210214_Eclipse_Hela_QC 845.726013183594 3 845.055225 2532.14385 0.54554 0.00046101 0.7533 0.00063658 1.2988 0.0010976 845.390017022261 61.751 2.3796 61.751 61.293 63.672 0 171 47 6 0 0 0 0.000284 3 66902 48.685 45.962 1 32200000 2078 445 1916 1945 2434;2435;2436 2435 ANEQEPCGWWLAR 13 Unmodified _ANEQEPCGWWLAR_ 0 0 0 P51116 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 809.373107910156 2 808.867357 1615.72016 1.2526 0.0010132 1.4267 0.001154 2.6793 0.0021672 809.369786497068 72.76 0.99667 72.76 72.463 73.459 0 44 19 4 0 0 0 0.0012589 1 81739 74.841 68.601 1 5872300 2079 1433 1917 1946 2437 2437 ANEVEQMIR 9 Unmodified _ANEVEQMIR_ 0 0 0 Q14204 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 MULTI-MSMS 210214_Eclipse_Hela_QC 545.271484375 2 545.271498 1088.52844 0.25862 0.00014102 -0.22472 -0.00012253 0.033898 1.8484E-05 545.271379497942 40.912 0.59682 40.912 40.611 41.208 0 25 11 3 0 0 0 0.0037146 1 36798 68.625 49.647 1 18175000 2080 2070 1918 1947 2438 2438 ANFLQNMIEDR 11 Unmodified _ANFLQNMIEDR_ 0 0 0 O95486 O95486 O95486 SEC24A Protein transport protein Sec24A MULTI-MSMS 210214_Eclipse_Hela_QC 675.826293945312 2 675.827169 1349.63978 1.094 0.00073937 0.75696 0.00051157 1.851 0.0012509 675.826869953916 80.685 0.89373 80.685 80.259 81.153 0 32 17 3 0 0 0 0.0006561 1 92830 76.228 62.021 1 3844700 2081 576 1919 1948 2439 2439 ANFWYQPSFHGVDLSALR 18 Unmodified _ANFWYQPSFHGVDLSALR_ 0 0 0 Q86X55 Q86X55 Q86X55 CARM1 Histone-arginine methyltransferase CARM1 MULTI-MSMS 210214_Eclipse_Hela_QC 703.349487304688 3 703.349796 2107.02756 1.4228 0.0010007 -0.58637 -0.00041243 0.83645 0.00058832 703.683980169363 96.944 1.144 96.944 96.323 97.467 0 45 22 3 0 0 0 0.0017964 1 115278 35.64 33.989 1 7804800 2082 2598 1920 1949 2440 2440 ANFYCELCDK 10 Unmodified _ANFYCELCDK_ 0 0 0 Q9UKJ3;Q7Z570;A4D1E1 Q9UKJ3 Q9UKJ3 GPATCH8;ZNF804A;ZNF804B G patch domain-containing protein 8;Zinc finger protein 804A;Zinc finger protein 804B MULTI-MSMS 210214_Eclipse_Hela_QC 660.274963378906 2 660.27338 1318.53221 1.3947 0.00092087 0.52003 0.00034336 1.9147 0.0012642 660.273881547048 51.156 0.38601 51.156 51.013 51.399 0 13 7 2 0 0 0 0.018774 1 51543 46.819 46.819 1 2022700 2083 3909 1921 1950 2441 2441 ANGHLLLNSEK 11 Unmodified _ANGHLLLNSEK_ 0 0 0 Q9P2J5 Q9P2J5 Q9P2J5 LARS Leucine--tRNA ligase, cytoplasmic MULTI-MSMS 210214_Eclipse_Hela_QC 598.3251953125 2 598.325119 1194.63569 0.55255 0.0003306 -0.46224 -0.00027657 0.090303 5.403E-05 598.325026195382 22.869 0.29899 22.869 22.703 23.002 0 8 5 2 0 0 0 4.1964E-05 1 11247 103.01 79.237 1 8845200 2084 3804 1922 1951 2442 2442 ANGMELDGR 9 Unmodified _ANGMELDGR_ 0 0 0 P62995;Q13595 P62995;Q13595 P62995 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha MULTI-MSMS 210214_Eclipse_Hela_QC 481.722015380859 2 481.721641 961.428729 0.076094 3.6656E-05 0.15843 7.6319E-05 0.23452 0.00011297 481.721725001211 24.494 0.646 24.494 24.269 24.915 0 27 12 3 0 0 0 3.2897E-07 1 13485 150.4 105.71 1 54344000 2085 1702;2014 1923 1952 2443 2443 ANGTTVHVGIHPSK 14 Unmodified _ANGTTVHVGIHPSK_ 0 0 0 P61254 P61254 P61254 RPL26 60S ribosomal protein L26 MULTI-MSMS 210214_Eclipse_Hela_QC 473.256286621094 3 473.256397 1416.74736 -0.18289 -8.6553E-05 0.41195 0.00019496 0.22906 0.0001084 473.256588254765 20.09 0.69621 20.09 19.917 20.613 0 35 13 5 0 0 0 2.2284E-07 1 7218 95.981 82.018 1 102450000 2086 1612 1924 1953 2444 2444 ANGTTVHVGIHPSK 14 Unmodified _ANGTTVHVGIHPSK_ 0 0 0 P61254 P61254 P61254 RPL26 60S ribosomal protein L26 MULTI-MSMS 210214_Eclipse_Hela_QC 709.381225585938 2 709.380957 1416.74736 0.43344 0.00030748 0.41908 0.00029728 0.85252 0.00060476 709.381265578347 20.09 0.44733 20.09 19.917 20.364 0 27 8 5 0 0 0 1.4324E-15 1 7219 150.14 135.94 1 50147000 2087 1612 1924 1953 2445 2445 ANGVNPDSLLR 11 Unmodified _ANGVNPDSLLR_ 0 0 0 Q9H0H0 Q9H0H0 Q9H0H0 INTS2 Integrator complex subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 578.308410644531 2 578.309469 1154.60439 0.58456 0.00033806 -2.1264 -0.0012297 -1.5419 -0.00089167 578.308444428333 59.975 0.59782 59.975 59.601 60.199 0 16 11 2 0 0 0 0.024308 1 63910 40.352 22.726 1 2949700 2088 3411 1925 1954 2446 2446 ANHEEVLAAGK 11 Unmodified _ANHEEVLAAGK_ 0 0 0 P00491 P00491 P00491 PNP Purine nucleoside phosphorylase MULTI-MSMS 210214_Eclipse_Hela_QC 569.794799804688 2 569.796195 1137.57784 -0.11179 -6.3696E-05 -0.87977 -0.00050129 -0.99156 -0.00056499 569.795604272982 18.616 0.89867 18.616 18.42 19.319 0 45 19 3 0 0 0 0.0033867 2 4968 57.477 43.688 1 62256000 2089 626 1926 1955 2447;2448 2447 ANHFFTVTDPR 11 Unmodified _ANHFFTVTDPR_ 0 0 0 Q9H9B4 Q9H9B4 Q9H9B4 SFXN1 Sideroflexin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 435.551330566406 3 435.550921 1303.63093 -0.073537 -3.2029E-05 0.025818 1.1245E-05 -0.047718 -2.0784E-05 435.550928935583 40.954 1.2931 40.954 40.362 41.655 0 54 25 4 0 0 0 0.0010934 1 36884 51.286 33.85 1 14853000 2090 3522 1927 1956 2449 2449 ANHGPGMAMNWPQFEEWSADLNR 23 Unmodified _ANHGPGMAMNWPQFEEWSADLNR_ 0 0 0 Q9UNF0 Q9UNF0 Q9UNF0 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 886.726867675781 3 886.725268 2657.15397 1.7635 0.0015637 -0.12374 -0.00010972 1.6397 0.001454 887.3934282021 96.895 1.3922 96.895 96.124 97.517 0 73 27 6 0 0 0 0.017472 2 115250 27.408 24.442 1 6540700 2091 3953 1928 1957 2450;2451 2450 ANITAIR 7 Unmodified _ANITAIR_ 0 0 0 P49368 P49368 P49368 CCT3 T-complex protein 1 subunit gamma MSMS 210214_Eclipse_Hela_QC 379.729278564453 2 379.729595 757.444637 NaN NaN NaN NaN NaN NaN NaN 24.94 1 24.94 24.44 25.44 0 0 0 0 0.0056197 1 14187 94.777 41.679 1 2092 1369 1929 1958 2452 2452 ANIVAYHDSIMNPDYNVEFFR 21 Unmodified _ANIVAYHDSIMNPDYNVEFFR_ 0 0 0 Q9UBT2 Q9UBT2 Q9UBT2 UBA2 SUMO-activating enzyme subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 839.732727050781 3 839.061875 2514.16379 1.3331 0.0011185 0.14129 0.00011855 1.4744 0.0012371 839.396680118225 91.021 0.99432 91.021 90.654 91.648 0 72 19 5 0 0 0 6.8821E-10 1 106939 106.39 103.1 1 24507000 2093 3830 1930 1959 2453 2453 ANIVHLMLSSPEQIQK 16 Unmodified _ANIVHLMLSSPEQIQK_ 0 0 0 P55060 P55060 P55060 CSE1L Exportin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 603.329406738281 3 603.329344 1806.9662 0.54247 0.00032729 -0.60866 -0.00036722 -0.066192 -3.9936E-05 603.663559925517 69.701 1.2914 69.701 68.981 70.273 0 85 25 6 0 0 0 2.5498E-38 1 77451 144.29 110.01 1 97479000 2094 1529 1931 1960 2454 2454 ANIVHLMLSSPEQIQK 16 Unmodified _ANIVHLMLSSPEQIQK_ 0 0 0 P55060 P55060 P55060 CSE1L Exportin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 904.993041992188 2 904.490378 1806.9662 0.93234 0.0008433 -0.19927 -0.00018024 0.73307 0.00066305 904.49004402128 69.775 0.34848 69.775 69.477 69.825 0 14 6 3 0 0 0 0.0055107 1 77563 43.628 28.427 1 3663000 2095 1529 1931 1960 2455 2455 ANLEAFTVDK 10 Unmodified _ANLEAFTVDK_ 0 0 0 P33176 P33176 P33176 KIF5B Kinesin-1 heavy chain MULTI-MSMS 210214_Eclipse_Hela_QC 554.287719726562 2 554.287671 1106.56079 0.894 0.00049553 -0.42847 -0.00023749 0.46553 0.00025804 554.287361496859 50.459 0.69703 50.459 50.13 50.827 0 39 13 5 0 0 0 0.0035776 1 50489 63.426 40.686 1 11547000 2096 1163 1932 1961 2456 2456 ANLENPIR 8 Unmodified _ANLENPIR_ 0 0 0 O00330 O00330 O00330 PDHX Pyruvate dehydrogenase protein X component, mitochondrial MSMS 210214_Eclipse_Hela_QC 463.756866455078 2 463.756341 925.498129 NaN NaN NaN NaN NaN NaN NaN 30.366 1 30.366 29.866 30.866 0 0 0 0 0.03329 1 21938 61.357 33.184 1 2097 150 1933 1962 2457 2457 ANLLEIAPHLSAPLPIMLPVYK 22 Unmodified _ANLLEIAPHLSAPLPIMLPVYK_ 0 0 0 P43304 P43304 P43304 GPD2 Glycerol-3-phosphate dehydrogenase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 801.131103515625 3 800.79563 2399.36506 1.5126 0.0012113 -0.037596 -3.0107E-05 1.475 0.0011812 801.130015291311 107.53 0.29826 107.53 107.41 107.71 0 20 5 6 0 0 0 1.6111E-06 1 130001 77.959 74.745 1 29236000 2098 1290 1934 1963 2458 2458 ANLLNNEAHAITMQVTK 17 Unmodified _ANLLNNEAHAITMQVTK_ 0 0 0 P46063 P46063 P46063 RECQL ATP-dependent DNA helicase Q1 MULTI-MSMS 210214_Eclipse_Hela_QC 623.661560058594 3 623.328004 1866.96218 -0.46093 -0.00028731 0.94719 0.00059041 0.48626 0.0003031 623.329194114325 62.109 0.88716 62.109 61.691 62.578 0 37 17 3 0 0 0 0.019831 1 66721 30.336 20.805 1 31725000 2099 1302 1935 1964 2459 2459 ANLPQSFQVDTSK 13 Unmodified _ANLPQSFQVDTSK_ 0 0 0 P21333 P21333 P21333 FLNA Filamin-A MULTI-MSMS 210214_Eclipse_Hela_QC 717.864807128906 2 717.864805 1433.71506 0.65688 0.00047155 -0.75042 -0.0005387 -0.093539 -6.7148E-05 717.864915317751 51.824 1.2939 51.824 51.299 52.593 0 69 25 5 0 0 0 5.1012E-06 2 52699 109.16 90.717 1 116360000 2100 995 1936 1965 2460;2461 2460 ANLQIDQINTDLNLER 16 Unmodified _ANLQIDQINTDLNLER_ 0 0 0 P35579 P35579 P35579 MYH9 Myosin-9 MULTI-MSMS 210214_Eclipse_Hela_QC 935.48779296875 2 935.486879 1868.9592 1.1138 0.0010419 0.18145 0.00016974 1.2952 0.0012117 935.988611593553 84.014 0.94582 84.014 83.703 84.649 0 57 18 5 0 0 0 1.0651E-22 1 97220 199.12 182.59 1 59706000 2101 1191 1937 1966 2462 2462 ANLSLLR 7 Unmodified _ANLSLLR_ 0 0 0 P23246 P23246 P23246 SFPQ Splicing factor, proline- and glutamine-rich MULTI-MSMS 210214_Eclipse_Hela_QC 393.744842529297 2 393.745245 785.475937 0.13878 5.4645E-05 -0.22242 -8.7576E-05 -0.083636 -3.2931E-05 393.745119299859 42.556 1.1949 42.556 42.149 43.344 0 58 23 4 0 0 0 0.013893 1 38987 71.852 14.517 1 73317000 2102 1018 1938 1967 2463 2463 ANLVLLSGANEGK 13 Unmodified _ANLVLLSGANEGK_ 0 0 0 O43847 O43847 O43847 NRD1 Nardilysin MULTI-MSMS 210214_Eclipse_Hela_QC 643.359680175781 2 643.359159 1284.70376 0.6935 0.00044617 0.25257 0.00016249 0.94607 0.00060866 643.359345489061 54.998 0.74619 54.998 54.625 55.371 0 27 14 2 0 0 0 0.00042453 1 56777 88.24 71.907 1 9397000 2103 346 1939 1968 2464 2464 ANNGICFLR 9 Unmodified _ANNGICFLR_ 0 0 0 P47897 P47897 P47897 QARS Glutamine--tRNA ligase MSMS 210214_Eclipse_Hela_QC 532.769348144531 2 532.768926 1063.5233 NaN NaN NaN NaN NaN NaN NaN 50.41 1 50.41 49.91 50.91 0 0 0 0 0.0040774 1 50421 95.352 63.397 1 2104 1331 1940 1969 2465 2465 ANNIDYTVHSVR 12 Unmodified _ANNIDYTVHSVR_ 0 0 0 P29144 P29144 P29144 TPP2 Tripeptidyl-peptidase 2 MSMS 210214_Eclipse_Hela_QC 463.568786621094 3 463.568752 1387.68443 NaN NaN NaN NaN NaN NaN NaN 28.386 1 28.386 27.886 28.886 0 0 0 0 0.006879 1 19120 49.423 43.39 1 2105 1097 1941 1970 2466 2466 ANNLHSGDNFQLNDSEIER 19 Unmodified _ANNLHSGDNFQLNDSEIER_ 0 0 0 Q9BZF1 Q9BZF1 Q9BZF1 OSBPL8 Oxysterol-binding protein-related protein 8 MSMS 210214_Eclipse_Hela_QC 725.004028320312 3 725.001672 2171.98319 NaN NaN NaN NaN NaN NaN NaN 48.382 1 48.382 47.882 48.882 0 0 0 0 0.021013 1 47557 30.428 26.787 1 2106 3368 1942 1971 2467 2467 ANNLSSLSK 9 Unmodified _ANNLSSLSK_ 0 0 0 O75396 O75396 O75396 SEC22B Vesicle-trafficking protein SEC22b MULTI-MSMS 210214_Eclipse_Hela_QC 467.253509521484 2 467.253631 932.49271 0.2571 0.00012013 -0.27188 -0.00012704 -0.014785 -6.9084E-06 467.253511067374 22.685 0.64768 22.685 22.504 23.151 0 37 12 4 0 0 0 0.00041652 2 10896 103.87 65.712 1 45002000 2107 452 1943 1972 2468;2469 2468 ANNNAAVAPTTCPLQPVTDPFAFSR 25 Unmodified _ANNNAAVAPTTCPLQPVTDPFAFSR_ 0 0 0 O15027 O15027 O15027 SEC16A Protein transport protein Sec16A MULTI-MSMS 210214_Eclipse_Hela_QC 1330.658203125 2 1330.15029 2658.28603 2.1504 0.0028603 -0.18169 -0.00024168 1.9687 0.0026186 1330.65209801069 96.745 0.49749 96.745 96.472 96.969 0 26 9 3 0 0 0 0.0014324 1 115106 38.028 33.559 1 4592600 2108 232 1944 1973 2470 2470 ANNSQEPSPQLASSVASTR 19 Unmodified _ANNSQEPSPQLASSVASTR_ 0 0 0 Q96HC4 Q96HC4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 MULTI-MSMS 210214_Eclipse_Hela_QC 972.47509765625 2 972.4745 1942.93445 0.86183 0.00083811 0.22883 0.00022253 1.0907 0.0010606 972.474643172558 43.124 0.64783 43.124 42.796 43.444 0 39 12 5 0 0 0 0.00021896 1 40009 77.912 75.203 1 9113600 2109 3051 1945 1974 2471 2471 ANNYNEAVYLVR 12 Unmodified _ANNYNEAVYLVR_ 0 0 0 Q09161 Q09161 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 713.8623046875 2 713.35969 1424.70483 1.2436 0.00088711 0.2781 0.00019839 1.5217 0.0010855 713.359846055151 57.835 0.84654 57.835 57.462 58.308 0 43 16 5 0 0 0 4.3722E-05 1 60705 99.815 83.561 1 21791000 2110 1894 1946 1975 2472 2472 ANPDLPILIR 10 Unmodified _ANPDLPILIR_ 0 0 0 O43678 O43678 O43678 NDUFA2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 561.337890625 2 561.337498 1120.66044 0.54282 0.0003047 0.30738 0.00017254 0.8502 0.00047725 561.337433546134 76.577 0.89577 76.577 76.079 76.975 0 46 17 4 0 0 0 0.0042957 1 86826 60.91 49.399 1 15522000 2111 326 1947 1976 2473 2473 ANPDPNCCLGVFGLSLYTTER 21 Unmodified _ANPDPNCCLGVFGLSLYTTER_ 0 0 0 P62995 P62995 P62995 TRA2B Transformer-2 protein homolog beta MULTI-MSMS 210214_Eclipse_Hela_QC 1193.05895996094 2 1192.55411 2383.09367 1.3931 0.0016613 -0.83596 -0.00099692 0.55712 0.0006644 1193.05476894643 105.16 0.69837 105.16 104.73 105.43 0 38 13 5 0 0 0 9.0467E-50 2 126717 242.07 230.97 1 74216000 2112 1702 1948 1977 2474;2475 2474 ANPDPNTCLGVFGLSLYTTER 21 Unmodified _ANPDPNTCLGVFGLSLYTTER_ 0 0 0 Q13595 Q13595 Q13595 TRA2A Transformer-2 protein homolog alpha MULTI-MSMS 210214_Eclipse_Hela_QC 1163.56530761719 2 1163.06262 2324.1107 0.8171 0.00095033 1.1147 0.0012965 1.9318 0.0022469 1163.56441611367 105.62 0.34895 105.62 105.43 105.77 0 24 6 6 0 0 0 8.5019E-10 1 127408 151.07 141.15 1 29711000 2113 2014 1949 1978 2476 2476 ANPFGGASHAK 11 Unmodified _ANPFGGASHAK_ 0 0 0 P62266 P62266 P62266 RPS23 40S ribosomal protein S23 MULTI-MSMS 210214_Eclipse_Hela_QC 528.765258789062 2 528.764697 1055.51484 0.72831 0.0003851 0.22207 0.00011742 0.95038 0.00050253 528.764939243879 18.133 1.3105 18.133 17.859 19.17 0 128 40 6 0 0 0 0.029307 1 4964 37.344 26.877 1 229830000 2114 1651 1950 1979 2477 2477 ANPGAWILR 9 Unmodified _ANPGAWILR_ 0 0 0 Q9NYU2;Q9NYU1 Q9NYU2 Q9NYU2 UGGT1;UGGT2 UDP-glucose:glycoprotein glucosyltransferase 1;UDP-glucose:glycoprotein glucosyltransferase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 499.283020019531 2 499.282526 996.550499 0.8482 0.00042349 -0.13006 -6.4939E-05 0.71813 0.00035855 499.28238334766 61.023 0.5959 61.023 60.697 61.293 0 31 11 4 0 0 0 0.02391 1 65282 46.994 26.712 1 4832200 2115 3751 1951 1980 2478 2478 ANPQVGVAFPHIK 13 Unmodified _ANPQVGVAFPHIK_ 0 0 0 P13010 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 210214_Eclipse_Hela_QC 459.926391601562 3 459.9261 1376.75647 0.30503 0.00014029 0.071876 3.3058E-05 0.37691 0.00017335 459.926129653608 51.778 0.94568 51.778 51.399 52.344 0 59 18 4 0 0 0 0.022664 2 52105 32.624 29.179 1 46974000 2116 856 1952 1981 2479;2480 2479 ANPQVGVAFPHIK 13 Unmodified _ANPQVGVAFPHIK_ 0 0 0 P13010 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 MULTI-MSMS 210214_Eclipse_Hela_QC 689.386962890625 2 689.385511 1376.75647 0.74228 0.00051172 0.11251 7.7562E-05 0.85479 0.00058928 689.385586309011 51.871 0.79632 51.871 51.399 52.195 0 42 15 4 0 0 0 0.00017552 1 52216 106.2 95.391 1 11961000 2117 856 1952 1981 2481 2481 ANPTQLNTVEFLWDPAK 17 Unmodified _ANPTQLNTVEFLWDPAK_ 0 0 0 Q12800 Q12800 Q12800 TFCP2 Alpha-globin transcription factor CP2 MULTI-MSMS 210214_Eclipse_Hela_QC 972.497253417969 2 972.496715 1942.97888 1.9118 0.0018592 -0.26872 -0.00026132 1.6431 0.0015979 972.998364622184 101.6 0.79553 101.6 101.15 101.94 0 38 15 4 0 0 0 0.038401 1 121713 31.228 25.622 1 3375500 2118 1912 1953 1982 2482 2482 ANQLAEEIESSAQYK 15 Unmodified _ANQLAEEIESSAQYK_ 0 0 0 Q99700 Q99700 Q99700 ATXN2 Ataxin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 840.907958984375 2 840.907399 1679.80024 0.93291 0.00078449 -0.5944 -0.00049984 0.33851 0.00028465 840.907002094999 65.117 0.54845 65.117 64.755 65.304 0 26 10 3 0 0 0 0.0071233 2 70906 43.544 37.303 1 4386700 2119 3185 1954 1983 2483;2484 2483 ANQVNGNAVQLK 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ANQVNGNAVQLK_ 1 0 0 O43390 O43390 O43390 HNRNPR Heterogeneous nuclear ribonucleoprotein R MULTI-MSMS 210214_Eclipse_Hela_QC 649.848327636719 2 649.346583 1296.67861 1.0316 0.00066985 -0.16649 -0.00010811 0.86508 0.00056174 649.346409155151 50.454 0.49802 50.454 50.179 50.677 0 17 9 2 0 0 0 0.0064984 1 50498 61.691 39.454 1 7299600 2120 300 1955 1984 2485 2485 ANSFTVSSVAAPSWLHR 17 Unmodified _ANSFTVSSVAAPSWLHR_ 0 0 0 Q00341 Q00341 Q00341 HDLBP Vigilin MULTI-SECPEP 210214_Eclipse_Hela_QC 610.350036621094 3 610.647953 1828.92203 0.46036 0.00028111 0.12659 7.7301E-05 0.58694 0.00035842 610.982355815531 73.936 0.79652 73.936 73.708 74.505 0 43 15 4 0 0 0 0.0094489 1 83401 56.851 46.237 1 15327000 2121 1796 1956 1985 2486 2486 ANSNLVLQADR 11 Unmodified _ANSNLVLQADR_ 0 0 0 O75643 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase MULTI-MSMS 210214_Eclipse_Hela_QC 600.820556640625 2 600.820201 1199.62585 0.69634 0.00041837 -0.14336 -8.6132E-05 0.55298 0.00033224 600.820151259721 34.192 0.68534 34.192 33.817 34.502 0 40 13 4 0 0 0 0.00014789 1 27275 95.483 73.397 1 24258000 2122 472 1957 1986 2487 2487 ANSPSLFGTEGK 12 Unmodified _ANSPSLFGTEGK_ 0 0 0 Q96B97 Q96B97 Q96B97 SH3KBP1 SH3 domain-containing kinase-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 604.804504394531 2 604.30131 1206.58807 0.78339 0.00047341 0.71352 0.00043118 1.4969 0.00090459 604.803031169979 39.877 0.54655 39.877 39.617 40.164 0 22 10 3 0 0 0 0.0071033 1 35618 58.676 48.153 1 4742300 2123 2972 1958 1987 2488 2488 ANTFLGAK 8 Unmodified _ANTFLGAK_ 0 0 0 CON__ENSEMBL:ENSBTAP00000007350;CON__P01030 CON__ENSEMBL:ENSBTAP00000007350;CON__P01030 CON__ENSEMBL:ENSBTAP00000007350 MULTI-MSMS 210214_Eclipse_Hela_QC 411.229156494141 2 411.229428 820.444303 -0.53213 -0.00021883 0.3932 0.00016169 -0.13894 -5.7135E-05 411.229467192731 26.281 0.29961 26.281 26.058 26.358 0 13 5 4 0 0 0 0.0051924 1 16103 80.098 23.588 1 24829000 + 2124 33;47 1959 1988 2489 2489 ANTFVAELK 9 Unmodified _ANTFVAELK_ 0 0 0 P40926 P40926 P40926 MDH2 Malate dehydrogenase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 496.774322509766 2 496.7742 991.533846 0.11076 5.5021E-05 -0.35912 -0.0001784 -0.24836 -0.00012338 496.774008615036 45.701 0.84613 45.701 45.284 46.13 0 53 16 4 0 0 0 0.00057079 1 43440 97.635 72.185 1 145610000 2125 1248 1960 1989 2490 2490 ANVAVVSGAPLQGQLVAR 18 Unmodified _ANVAVVSGAPLQGQLVAR_ 0 0 0 O00560 O00560 O00560 SDCBP Syntenin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 876.004699707031 2 875.502135 1748.98972 0.86759 0.00075957 0.47136 0.00041268 1.3389 0.0011723 876.003737728713 69.764 0.44771 69.764 69.526 69.974 0 23 8 4 0 0 0 9.3202E-05 1 77556 73.848 69.054 1 6506200 2126 171 1961 1990 2491 2491 ANVEAIMLAVMK 12 Unmodified _ANVEAIMLAVMK_ 0 0 0 O43592 O43592 O43592 XPOT Exportin-T MULTI-MSMS 210214_Eclipse_Hela_QC 645.351318359375 2 645.351434 1288.68831 1.1607 0.00074909 -0.76568 -0.00049414 0.39506 0.00025495 645.351268129268 103.38 1.1433 103.38 102.59 103.73 0 59 22 4 0 0 0 2.9376E-05 1 124049 101.11 89.954 1 11506000 2127 314 1962 1991 2492 2492 ANVNEILDFFHGYR 14 Unmodified _ANVNEILDFFHGYR_ 0 0 0 Q8IXT5 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B MULTI-MSMS 210214_Eclipse_Hela_QC 565.950317382812 3 565.614361 1693.82125 1.3632 0.00077102 0.37619 0.00021278 1.7393 0.00098379 565.94883527439 98.248 0.49737 98.248 98.013 98.511 0 20 9 3 0 0 0 0.056152 1 117246 13.418 10.1 1 1504200 2128 2641 1963 1992 2493 2493 ANVTVLDTQIR 11 Unmodified _ANVTVLDTQIR_ 0 0 0 Q9NZM1 Q9NZM1 Q9NZM1 MYOF Myoferlin MULTI-MSMS 210214_Eclipse_Hela_QC 615.346130371094 2 615.346052 1228.67755 0.81925 0.00050412 -0.090376 -5.5612E-05 0.72887 0.00044851 615.345977881091 53.621 0.54786 53.621 53.291 53.839 0 26 10 4 0 0 0 1.8134E-05 1 54883 111.61 91.82 1 10100000 2129 3768 1964 1993 2494 2494 ANYAVDAYFR 10 Unmodified _ANYAVDAYFR_ 0 0 0 O60264;P28370 O60264 O60264 SMARCA5;SMARCA1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5;Probable global transcription activator SNF2L1 MULTI-MSMS 210214_Eclipse_Hela_QC 595.788513183594 2 595.285463 1188.55637 1.1304 0.00067291 2.5297 0.0015059 3.6601 0.0021788 595.787423812641 61.024 0.94399 61.024 60.647 61.591 0 69 18 6 0 0 0 0.00034511 1 65433 93.143 84.725 1 23246000 2130 356 1965 1994 2495 2495 ANYDVLESQK 10 Unmodified _ANYDVLESQK_ 0 0 0 O00233 O00233 O00233 PSMD9 26S proteasome non-ATPase regulatory subunit 9 MULTI-MSMS 210214_Eclipse_Hela_QC 583.787841796875 2 583.788035 1165.56152 0.45855 0.0002677 -0.57949 -0.0003383 -0.12093 -7.06E-05 583.788027370749 37.12 0.6803 37.12 36.766 37.447 0 40 13 4 0 0 0 5.2347E-06 1 31468 128.27 106.03 1 24747000 2131 141 1966 1995 2496 2496 ANYMDNWK 8 Unmodified _ANYMDNWK_ 0 0 0 Q96EE3 Q96EE3 Q96EE3 SEH1L Nucleoporin SEH1 MULTI-MSMS 210214_Eclipse_Hela_QC 521.226318359375 2 521.226559 1040.43857 0.010444 5.4436E-06 0.17451 9.0958E-05 0.18495 9.6402E-05 521.226814664496 41.027 0.6465 41.027 40.711 41.357 0 26 12 3 0 0 0 0.056349 1 37018 39.324 36.184 1 6140600 2132 3009 1967 1996 2497 2497 ANYWWLR 7 Unmodified _ANYWWLR_ 0 0 0 P31939 P31939 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase MULTI-MSMS 210214_Eclipse_Hela_QC 504.75634765625 2 504.756144 1007.49774 0.60364 0.00030469 -0.75863 -0.00038292 -0.15498 -7.8229E-05 504.756258890516 72.483 2.0909 72.483 71.717 73.808 0 80 41 4 0 0 0 0.0094104 1 81288 81.1 52.891 1 8182800 2133 1148 1968 1997 2498 2498 APAALPALCDLLASAADPQIR 21 Unmodified _APAALPALCDLLASAADPQIR_ 0 0 0 Q8TEX9 Q8TEX9 Q8TEX9 IPO4 Importin-4 MULTI-MSMS 210214_Eclipse_Hela_QC 1068.07312011719 2 1067.56989 2133.12522 1.6745 0.0017876 -0.55672 -0.00059433 1.1177 0.0011933 1068.07081764626 108.33 0.3982 108.33 108.06 108.46 0 19 7 5 0 0 0 2.0552E-20 1 131106 141.46 134.74 1 22467000 2134 2813 1969 1998 2499 2499 APAEGVLTLR 10 Unmodified _APAEGVLTLR_ 0 0 0 Q9H6S3 Q9H6S3 Q9H6S3 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 513.80029296875 2 513.800749 1025.58694 0.43158 0.00022174 -0.20456 -0.0001051 0.22702 0.00011664 513.800642732921 49.262 0.39836 49.262 49.038 49.436 0 12 7 2 0 0 0 0.0027579 1 48891 66.299 42.775 1 4203900 2135 3487 1970 1999 2500 2500 APAEILNGK 9 Unmodified _APAEILNGK_ 0 0 0 P11586 P11586 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 456.761291503906 2 456.761092 911.507631 -0.18588 -8.4904E-05 0.38401 0.0001754 0.19813 9.0496E-05 456.761109021508 26.58 0.49782 26.58 26.358 26.856 0 24 9 4 0 0 0 9.905E-08 3 16478 161.6 125.8 1 32581000 2136 837 1971 2000 2501;2502;2503 2501 APAGQLPR 8 Unmodified _APAGQLPR_ 0 0 0 P25205 P25205 P25205 MCM3 DNA replication licensing factor MCM3 MULTI-MSMS 210214_Eclipse_Hela_QC 405.234771728516 2 405.235045 808.455536 -0.24054 -9.7477E-05 0.11861 4.8066E-05 -0.12193 -4.9411E-05 405.235045970757 20.923 0.54782 20.923 20.712 21.26 0 25 10 3 0 0 0 0.0030166 1 8353 94.163 39.638 1 20864000 2137 1040 1972 2001 2504 2504 APAHHPAAISTAK 13 Unmodified _APAHHPAAISTAK_ 0 0 0 Q5JTH9 Q5JTH9 Q5JTH9 RRP12 RRP12-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 424.567077636719 3 424.566683 1270.67822 -0.063293 -2.6872E-05 -2.1174 -0.00089896 -2.1807 -0.00092583 424.565419947986 16.166 0.35621 16.166 16.084 16.44 0 12 7 3 0 0 0 0.00050063 1 2639 61.11 43.301 1 18904000 2138 2329 1973 2002 2505 2505 APAMFNIR 8 Oxidation (M) _APAM(Oxidation (M))FNIR_ APAM(1)FNIR APAM(94)FNIR 0 1 0 P61247 P61247 P61247 RPS3A 40S ribosomal protein S3a MULTI-MSMS 210214_Eclipse_Hela_QC 468.241668701172 2 468.242012 934.469472 0.95647 0.00044786 -0.27257 -0.00012763 0.68389 0.00032023 468.241767728879 50.73 0.44732 50.73 50.479 50.926 0 20 8 3 0 0 0 0.0077581 1 50780 94.163 80.956 1 4779600 2139 1611 1974 2003 2506 2506 396 APAMFNIR 8 Unmodified _APAMFNIR_ 0 0 0 P61247 P61247 P61247 RPS3A 40S ribosomal protein S3a MULTI-MSMS 210214_Eclipse_Hela_QC 460.245269775391 2 460.244555 918.474557 0.86079 0.00039617 -0.01161 -5.3434E-06 0.84918 0.00039083 460.244541497576 50.702 1.1694 50.702 50.229 51.399 0 62 23 4 0 0 0 4.175E-14 1 51045 184.24 153.58 1 121860000 2140 1611 1974 2004 2507 2507 APAMQPAEIQFAQR 14 Unmodified _APAMQPAEIQFAQR_ 0 0 0 Q14684 Q14684 Q14684 RRP1B Ribosomal RNA processing protein 1 homolog B MULTI-MSMS 210214_Eclipse_Hela_QC 779.393493652344 2 779.39575 1556.77695 1.1401 0.00088857 -0.37692 -0.00029377 0.76315 0.0005948 779.394750556611 59.253 0.54644 59.253 58.955 59.501 0 26 10 4 0 0 0 0.00018987 1 62836 93.096 78.416 1 3490500 2141 2101 1975 2005 2508 2508 APAPEAEDEEVAR 13 Unmodified _APAPEAEDEEVAR_ 0 0 0 Q8NBN7 Q8NBN7 Q8NBN7 RDH13 Retinol dehydrogenase 13 MULTI-MSMS 210214_Eclipse_Hela_QC 692.322998046875 2 692.32297 1382.63139 0.67506 0.00046736 -0.16494 -0.00011419 0.51013 0.00035317 692.322769273013 25.96 0.39745 25.96 25.761 26.158 0 18 7 3 0 0 0 0.00075072 1 15646 64.73 50.612 1 7911900 2142 2732 1976 2006 2509 2509 APAQNPELTPGPAPAGPTPAPETNAPNHPSPAEYVEVLQELQR 43 Unmodified _APAQNPELTPGPAPAGPTPAPETNAPNHPSPAEYVEVLQELQR_ 0 0 0 P46379 P46379 P46379 BAG6 Large proline-rich protein BAG6 MULTI-MSMS 210214_Eclipse_Hela_QC 1486.08239746094 3 1485.07348 4452.19861 3.0267 0.0044949 -0.11082 -0.00016458 2.9159 0.0043303 1485.74189959725 102.61 0.74536 102.61 102.29 103.04 0 68 14 7 0 0 0 0.012873 2 123217 20.552 19.181 1 4646000 2143 1308 1977 2007 2510;2511 2511 APASVLPAATPR 12 Unmodified _APASVLPAATPR_ 0 0 0 P13861 P13861 P13861 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit MULTI-MSMS 210214_Eclipse_Hela_QC 575.832702636719 2 575.83258 1149.65061 0.30846 0.00017762 -1.1165 -0.00064291 -0.80804 -0.00046529 575.831913395553 40.802 0.796 40.802 40.362 41.158 0 44 15 4 0 0 0 9.145E-05 1 36602 95.523 79.379 1 22389000 2144 869 1978 2008 2512 2512 APAVQDLLTR 10 Unmodified _APAVQDLLTR_ 0 0 0 Q9NU22 Q9NU22 Q9NU22 MDN1 Midasin MULTI-MSMS 210214_Eclipse_Hela_QC 542.31201171875 2 542.31148 1082.60841 0.57637 0.00031257 -1.3563 -0.00073555 -0.77994 -0.00042297 542.311434001615 58.512 0.49748 58.512 58.259 58.756 0 21 9 3 0 0 0 0.0026659 1 61826 66.621 43.193 1 2608300 2145 3654 1979 2009 2513 2513 APDDLVAPVVK 11 Unmodified _APDDLVAPVVK_ 0 0 0 O43172 O43172 O43172 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 MULTI-MSMS 210214_Eclipse_Hela_QC 562.823425292969 2 562.321514 1122.62847 1.0027 0.00056385 -0.2798 -0.00015734 0.72292 0.00040652 562.321295757949 55.844 0.6471 55.844 55.471 56.118 0 29 12 3 0 0 0 0.00065177 1 57913 76.345 64.576 1 14459000 2146 287 1980 2010 2514 2514 APDEETLIALLAHAK 15 Unmodified _APDEETLIALLAHAK_ 0 0 0 Q9Y3E5 Q9Y3E5 Q9Y3E5 PTRH2 Peptidyl-tRNA hydrolase 2, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 531.62890625 3 531.294517 1590.86172 1.386 0.00073637 0.048974 2.602E-05 1.435 0.00076239 531.294577202328 97.731 0.8943 97.731 97.268 98.162 0 56 17 4 0 0 0 0.00033575 1 116275 47.201 35.931 1 9182600 2147 4068 1981 2011 2515 2515 APDELHYTYLDTFGR 15 Unmodified _APDELHYTYLDTFGR_ 0 0 0 P04843 P04843 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 600.289611816406 3 599.952931 1796.83696 0.96982 0.00058185 1.122 0.00067315 2.0918 0.001255 600.287924714118 72.322 1.095 72.322 71.965 73.06 0 76 21 5 0 0 0 0.0031583 1 81495 34.909 31.13 1 28217000 2148 671 1982 2012 2516 2516 APDELHYTYLDTFGRPVIVAYK 22 Unmodified _APDELHYTYLDTFGRPVIVAYK_ 0 0 1 P04843 P04843 P04843 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 643.335632324219 4 642.833783 2567.30603 1.1114 0.00071446 -0.15772 -0.00010139 0.95371 0.00061308 643.334208325122 84.905 1.3422 84.905 84.351 85.693 0 105 26 6 0 0 0 0.00015045 1 98447 53.201 48.849 1 53009000 2149 671 1983 2013 2517 2517 APDFLPLLNK 10 Unmodified _APDFLPLLNK_ 0 0 0 O75695 O75695 O75695 RP2 Protein XRP2 MULTI-MSMS 210214_Eclipse_Hela_QC 564.327087402344 2 564.326599 1126.63865 0.77042 0.00043477 0.51287 0.00028943 1.2833 0.0007242 564.326574370053 88.69 0.88448 88.69 88.279 89.163 0 51 17 4 0 0 0 0.0018163 1 103655 69.598 51.779 1 9733600 2150 478 1984 2014 2518 2518 APDFVFYAPR 10 Unmodified _APDFVFYAPR_ 0 0 0 P26038;P35241;P15311 P26038;P35241;P15311 P26038 MSN;RDX;EZR Moesin;Radixin;Ezrin MULTI-MSMS 210214_Eclipse_Hela_QC 591.801330566406 2 591.800749 1181.58694 0.97987 0.00057989 0.13829 8.1839E-05 1.1182 0.00066173 591.800794617455 76.005 2.4189 76.005 75.601 78.02 0 125 48 5 0 0 0 2.5884E-07 3 86804 141.93 125.39 1 159870000 2151 1054;1180;897 1985 2015 2519;2520;2521 2520 APDPGFQER 9 Unmodified _APDPGFQER_ 0 0 0 Q9UHL4 Q9UHL4 Q9UHL4 DPP7 Dipeptidyl peptidase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 508.789916992188 2 508.743431 1015.47231 0.5946 0.0003025 -0.99041 -0.00050387 -0.39581 -0.00020136 508.743123220197 30.643 1.2454 30.643 30.026 31.271 0 97 24 6 0 0 0 0.0067297 2 22153 60.788 34.447 1 1638200000 2152 3867 1986 2016 2522;2523 2522 APDVDVNIAGPDAALK 16 Unmodified _APDVDVNIAGPDAALK_ 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 210214_Eclipse_Hela_QC 783.413024902344 2 783.41212 1564.80969 1.2021 0.00094175 0.077295 6.0554E-05 1.2794 0.0010023 783.412032011412 70.352 0.79601 70.352 70.024 70.82 0 46 15 4 0 0 0 4.489E-23 2 78432 161.48 154.1 1 29291000 2153 1896 1987 2017 2524;2525 2524 APDVEGQGLDWSLK 14 Unmodified _APDVEGQGLDWSLK_ 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 210214_Eclipse_Hela_QC 757.878845214844 2 757.877913 1513.74127 0.63995 0.000485 0.41051 0.00031112 1.0505 0.00079612 757.878142361167 75.207 1.0467 75.207 74.654 75.701 0 29 20 2 0 0 0 3.0807E-07 1 85162 116.03 101.35 1 22937000 2154 1896 1988 2018 2526 2526 APDWVDAEECHR 12 Unmodified _APDWVDAEECHR_ 0 0 0 O14964 O14964 O14964 HGS Hepatocyte growth factor-regulated tyrosine kinase substrate MULTI-MSMS 210214_Eclipse_Hela_QC 495.545471191406 3 495.545619 1483.61503 -0.15152 -7.5084E-05 0.3317 0.00016437 0.18018 8.9288E-05 495.545806405557 36.085 0.63223 36.085 35.74 36.372 0 32 12 3 0 0 0 0.021308 1 29929 25.982 17.028 1 10146000 2155 223 1989 2019 2527 2527 APEAWDYGQGFVNEEMIR 18 Unmodified _APEAWDYGQGFVNEEMIR_ 0 0 0 P00387 P00387 P00387 CYB5R3 NADH-cytochrome b5 reductase 3;NADH-cytochrome b5 reductase 3 membrane-bound form;NADH-cytochrome b5 reductase 3 soluble form MULTI-MSMS 210214_Eclipse_Hela_QC 1056.98376464844 2 1056.4782 2110.94184 1.7499 0.0018488 0.51275 0.00054171 2.2627 0.0023905 1056.9800566678 93.408 0.84447 93.408 93.091 93.936 0 60 16 5 0 0 0 3.7439E-26 1 110277 162.93 153.39 1 19315000 2156 622 1990 2020 2528 2528 APEDFSQNWK 10 Unmodified _APEDFSQNWK_ 0 0 0 Q9GZR2 Q9GZR2 Q9GZR2 REXO4 RNA exonuclease 4 MULTI-MSMS 210214_Eclipse_Hela_QC 611.280212402344 2 611.280377 1220.5462 0.60535 0.00037004 -0.20683 -0.00012643 0.39852 0.00024361 611.280427495344 44.481 0.69586 44.481 44.19 44.886 0 17 13 2 0 0 0 0.0063389 1 41895 53.751 40.297 1 6963800 2157 3391 1991 2021 2529 2529 APEDVIQALEEK 12 Unmodified _APEDVIQALEEK_ 0 0 0 Q86W50 Q86W50 Q86W50 METTL16 Methyltransferase-like protein 16 MULTI-MSMS 210214_Eclipse_Hela_QC 671.3505859375 2 671.348457 1340.68236 1.5643 0.0010502 1.2107 0.0008128 2.775 0.001863 671.35023510117 77.453 0.59653 77.453 77.175 77.771 0 25 11 3 0 0 0 0.0013294 1 88396 63.073 48.4 1 4214900 2158 2589 1992 2022 2530 2530 APEEELPPLDPEEIR 15 Unmodified _APEEELPPLDPEEIR_ 0 0 0 Q8IY67 Q8IY67 Q8IY67 RAVER1 Ribonucleoprotein PTB-binding 1 MULTI-MSMS 210214_Eclipse_Hela_QC 867.936096191406 2 867.433249 1732.85195 0.67051 0.00058163 0.4745 0.0004116 1.145 0.00099323 867.934567555385 80.365 0.59502 80.365 80.21 80.805 0 16 11 2 0 0 0 0.0040773 1 92426 48.44 37.534 1 3991400 2159 2644 1993 2023 2531 2531 APEEPNIQVNPLGIPVNSK 19 Unmodified _APEEPNIQVNPLGIPVNSK_ 0 0 0 P43121 P43121 P43121 MCAM Cell surface glycoprotein MUC18 MULTI-MSMS 210214_Eclipse_Hela_QC 1009.04663085938 2 1008.54165 2015.06875 1.2672 0.001278 -0.10159 -0.00010245 1.1656 0.0011755 1009.04324532349 84.612 0.69667 84.612 84.251 84.948 0 41 13 4 0 0 0 0.00023648 1 98108 59.607 49.819 1 13706000 2160 1287 1994 2024 2532 2532 APEGQLPAFNEDGLR 15 Unmodified _APEGQLPAFNEDGLR_ 0 0 0 Q14691 Q14691 Q14691 GINS1 DNA replication complex GINS protein PSF1 MULTI-MSMS 210214_Eclipse_Hela_QC 807.359130859375 2 807.399544 1612.78453 1.3182 0.0010643 0.28024 0.00022626 1.5984 0.0012906 807.399889672971 67.91 0.59633 67.91 67.66 68.256 0 27 11 4 0 0 0 0.00042017 2 75121 82.171 75.318 1 5279000 2161 2103 1995 2025 2533;2534 2534 APEIIIGK 8 Unmodified _APEIIIGK_ 0 0 0 Q13523 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 420.763305664062 2 420.763104 839.511654 -0.042829 -1.8021E-05 3.3564 0.0014123 3.3136 0.0013942 420.763078198092 40.443 1.0445 40.443 39.965 41.009 0 46 20 4 0 0 0 0.037717 1 36111 46.426 19.947 1 6474500 2162 2003 1996 2026 2535 2535 APELLLGAK 9 Unmodified _APELLLGAK_ 0 0 0 Q9UQ88;P21127 Q9UQ88 Q9UQ88 CDK11A;CDK11B Cyclin-dependent kinase 11A;Cyclin-dependent kinase 11B MULTI-MSMS 210214_Eclipse_Hela_QC 456.281890869141 2 456.28166 910.548768 0.39047 0.00017816 -0.19365 -8.8358E-05 0.19682 8.9806E-05 456.281543258409 49.956 0.59412 49.956 49.635 50.229 0 20 11 2 0 0 0 0.026794 1 49806 45.68 16.342 1 5209500 2163 990 1997 2027 2536 2536 APEQEQAAPGPAAGGEAPK 19 Unmodified _APEQEQAAPGPAAGGEAPK_ 0 0 0 P80723 P80723 P80723 BASP1 Brain acid soluble protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 888.432678222656 2 888.431572 1774.84859 1.0845 0.00096351 -0.419 -0.00037225 0.66551 0.00059126 888.431129990783 24.49 0.69473 24.49 24.22 24.915 0 44 13 6 0 0 0 3.1579E-26 1 13369 193.97 159.79 1 345400000 2164 1759 1998 2028 2537 2537 APESLFLLEEMR 12 Unmodified _APESLFLLEEMR_ 0 0 0 Q12965 Q12965 Q12965 MYO1E Unconventional myosin-Ie MSMS 210214_Eclipse_Hela_QC 717.868408203125 2 717.868502 1433.72245 NaN NaN NaN NaN NaN NaN NaN 96.107 1 96.107 95.607 96.607 0 0 0 0 4.7691E-05 1 114200 125.75 91.786 1 2165 1929 1999 2029 2538 2538 APEVLPK 7 Unmodified _APEVLPK_ 0 0 0 P09669 P09669 P09669 COX6C Cytochrome c oxidase subunit 6C MULTI-MSMS 210214_Eclipse_Hela_QC 377.229064941406 2 377.228897 752.44324 -0.29844 -0.00011258 0.65373 0.00024661 0.35529 0.00013402 377.229089666992 25.586 0.54692 25.586 25.363 25.91 0 18 10 2 0 0 0 0.030805 1 15188 54.571 16.925 1 24424000 2166 783 2000 2030 2539 2539 APEVNLNAPDVDVHGPDWNLK 21 Unmodified _APEVNLNAPDVDVHGPDWNLK_ 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 210214_Eclipse_Hela_QC 767.716735839844 3 767.381713 2299.12331 0.4483 0.00034402 -0.22954 -0.00017615 0.21876 0.00016787 767.715870711064 80.383 0.7944 80.383 79.961 80.755 0 57 15 5 0 0 0 1.4116E-14 1 92335 127.5 118.79 1 95849000 2167 1896 2001 2031 2540 2540 APEVSQYIYQVYDSILK 17 Unmodified _APEVSQYIYQVYDSILK_ 0 0 0 P63010 P63010 P63010 AP2B1 AP-2 complex subunit beta MULTI-MSMS 210214_Eclipse_Hela_QC 1009.02301025391 2 1008.51986 2015.02516 1.4576 0.00147 0.85444 0.00086172 2.3121 0.0023318 1009.02161862719 108.03 0.44849 108.03 107.91 108.36 0 17 8 3 0 0 0 7.3936E-35 1 130758 172.57 164.85 1 31931000 2168 1704 2002 2032 2541 2541 APEYLHR 7 Unmodified _APEYLHR_ 0 0 0 Q9UN86 Q9UN86 Q9UN86 G3BP2 Ras GTPase-activating protein-binding protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 443.232452392578 2 443.232502 884.450451 0.17425 7.7235E-05 0.01165 5.1637E-06 0.1859 8.2398E-05 443.232447821164 19.543 0.34877 19.543 19.369 19.718 0 11 6 2 0 0 0 0.002703 1 6393 114.02 77.436 1 18254000 2169 3951 2003 2033 2542 2542 APFDLFENK 9 Unmodified _APFDLFENK_ 0 0 0 P08238;Q58FF7 P08238 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 MULTI-MSMS 210214_Eclipse_Hela_QC 541.287170410156 2 540.771657 1079.52876 0.85519 0.00046246 0.19729 0.00010669 1.0525 0.00056915 540.771720154205 73.423 1.345 73.423 72.961 74.306 0 81 26 5 0 0 0 2.2898E-22 3 82591 200.16 158.93 1 114730000 2170 745 2004 2034 2543;2544;2545 2544 APFDLFENKK 10 Unmodified _APFDLFENKK_ 0 0 1 P08238;Q58FF7 P08238 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 MULTI-MSMS 210214_Eclipse_Hela_QC 403.882965087891 3 403.548518 1207.62372 0.54627 0.00022045 0.091157 3.6786E-05 0.63743 0.00025723 403.54852750792 53.341 0.64814 53.341 53.042 53.69 0 34 12 3 0 0 0 0.045506 1 54482 24.254 15.04 1 8500200 2171 745 2005 2035 2546 2546 APFDLFENR 9 Unmodified _APFDLFENR_ 0 0 0 P07900 P07900 P07900 HSP90AA1 Heat shock protein HSP 90-alpha MULTI-MSMS 210214_Eclipse_Hela_QC 555.796203613281 2 554.774731 1107.53491 0.81261 0.00045081 0.027473 1.5241E-05 0.84008 0.00046606 554.774716020929 75.902 1.5729 75.902 75.452 77.025 0 90 31 6 0 0 0 0.00082699 3 86031 87.181 72.646 1 129300000 2172 730 2006 2036 2547;2548;2549 2548 APFDLFENRK 10 Unmodified _APFDLFENRK_ 0 0 1 P07900 P07900 P07900 HSP90AA1 Heat shock protein HSP 90-alpha MULTI-MSMS 210214_Eclipse_Hela_QC 412.884033203125 3 412.8839 1235.62987 0.75422 0.00031141 0.060156 2.4838E-05 0.81438 0.00033624 412.883904332355 55.643 1.0451 55.643 55.023 56.068 0 71 20 5 0 0 0 0.0027984 2 58096 61.353 29.345 1 20135000 2173 730 2007 2037 2550;2551 2551 APGAEEDDSELQR 13 Unmodified _APGAEEDDSELQR_ 0 0 0 Q53F19 Q53F19 Q53F19 C17orf85 Uncharacterized protein C17orf85 MSMS 210214_Eclipse_Hela_QC 708.816162109375 2 708.81551 1415.61647 NaN NaN NaN NaN NaN NaN NaN 24.585 1 24.585 24.085 25.085 0 0 0 0 1.2358E-05 1 13674 105.86 87.191 1 2174 2297 2008 2038 2552 2552 APGAGLGQDR 10 Unmodified _APGAGLGQDR_ 0 0 0 P50402 P50402 P50402 EMD Emerin MULTI-MSMS 210214_Eclipse_Hela_QC 471.243255615234 2 471.243598 940.472643 0.093272 4.3954E-05 -0.219 -0.0001032 -0.12573 -5.925E-05 471.243470541722 19.394 0.49787 19.394 19.021 19.518 0 22 9 3 0 0 0 3.128E-07 1 6234 140.14 114.4 1 17678000 2175 1412 2009 2039 2553 2553 APGAIGPYSQAVLVDR 16 Unmodified _APGAIGPYSQAVLVDR_ 0 0 0 P52758 P52758 P52758 HRSP12 Ribonuclease UK114 MULTI-MSMS 210214_Eclipse_Hela_QC 807.437377929688 2 807.435929 1612.85731 0.7858 0.00063448 0.86655 0.00069968 1.6523 0.0013342 807.436178420316 68.752 0.5263 68.752 68.455 68.981 0 17 10 2 0 0 0 0.0023463 1 75987 68.676 62.704 1 13573000 2176 1481 2010 2040 2554 2554 APGEQTVPALNLQNAFR 17 Unmodified _APGEQTVPALNLQNAFR_ 0 0 0 Q9Y5B9 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 MULTI-MSMS 210214_Eclipse_Hela_QC 913.982727050781 2 913.481399 1824.94825 1.1966 0.001093 -0.18178 -0.00016605 1.0148 0.00092698 913.481327396338 84.475 0.84591 84.475 84.201 85.047 0 45 16 4 0 0 0 9.6786E-08 1 98024 144.1 125.48 1 93844000 2177 4111 2011 2041 2555 2555 APGFAHLAGLDK 12 Unmodified _APGFAHLAGLDK_ 0 0 0 O75306 O75306 O75306 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial MSMS 210214_Eclipse_Hela_QC 399.552642822266 3 399.552262 1195.63496 NaN NaN NaN NaN NaN NaN NaN 48.057 1 48.057 47.557 48.557 0 0 0 0 0.023838 1 47090 32.439 22.13 1 2178 435 2012 2042 2556 2556 APGFAHLAGLDK 12 Unmodified _APGFAHLAGLDK_ 0 0 0 O75306 O75306 O75306 NDUFS2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial MULTI-SECPEP 210214_Eclipse_Hela_QC 599.27490234375 2 598.824755 1195.63496 0.71391 0.00042751 0.59483 0.0003562 1.3087 0.00078371 598.82504110107 48.061 0.49244 48.061 47.821 48.314 0 16 9 2 0 0 0 0.05736 1 47189 57.149 46.883 1 5353900 2179 435 2012 2042 2557 2557 APGFAQMLK 9 Unmodified _APGFAQMLK_ 0 0 0 P50990 P50990 P50990 CCT8 T-complex protein 1 subunit theta MULTI-MSMS 210214_Eclipse_Hela_QC 481.760589599609 2 481.760038 961.505523 0.84586 0.0004075 -0.40929 -0.00019718 0.43657 0.00021032 481.759781550921 54.242 1.2336 54.242 53.79 55.023 0 51 24 3 0 0 0 0.00018355 1 55647 113.1 73.145 1 58213000 2180 1428 2013 2043 2558 2558 APGFGGFGSSAVSGGSTAAMITETIIETDKPK 32 Unmodified _APGFGGFGSSAVSGGSTAAMITETIIETDKPK_ 0 0 1 P48444 P48444 P48444 ARCN1 Coatomer subunit delta MULTI-MSMS 210214_Eclipse_Hela_QC 1029.17956542969 3 1028.84465 3083.51213 1.1145 0.0011466 0.85046 0.00087499 1.9649 0.0020216 1029.17887136221 105.52 0.69784 105.52 105.28 105.97 0 37 13 4 0 0 0 1.2793E-56 1 127204 173.05 167.57 1 61062000 2181 1340 2014 2044 2559 2559 APGFLQPPPLR 11 Unmodified _APGFLQPPPLR_ 0 0 0 Q9H074 Q9H074 Q9H074 PAIP1 Polyadenylate-binding protein-interacting protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 596.845947265625 2 596.84549 1191.67643 1.1908 0.0007107 -0.086115 -5.1397E-05 1.1046 0.00065931 596.845334205703 70.62 0.99477 70.62 70.074 71.068 0 51 19 3 0 0 0 9.9321E-05 2 78511 98.523 98.523 1 10699000 2182 3402 2015 2045 2560;2561 2561 APGGFMSNR 9 Unmodified _APGGFMSNR_ 0 0 0 Q96KG9 Q96KG9 Q96KG9 SCYL1 N-terminal kinase-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 468.721038818359 2 468.721444 935.428335 -0.75442 -0.00035361 0.1407 6.595E-05 -0.61372 -0.00028766 468.721397221043 25.304 0.24861 25.304 25.164 25.412 0 7 4 2 0 0 0 0.023463 1 14816 47.198 31.044 1 2584100 2183 3087 2016 2046 2562 2562 APGGLSLHDYK 11 Unmodified _APGGLSLHDYK_ 0 0 0 P17275 P17275 P17275 JUNB Transcription factor jun-B MULTI-MSMS 210214_Eclipse_Hela_QC 579.301025390625 2 579.301113 1156.58767 0.86483 0.000501 -0.23357 -0.0001353 0.63127 0.00036569 579.300659726928 29.852 0.24858 29.852 29.678 29.926 0 7 4 2 0 0 0 0.016662 1 21181 45.368 18.984 1 3095000 2184 931 2017 2047 2563 2563 APGLGAFR 8 Unmodified _APGLGAFR_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 210214_Eclipse_Hela_QC 394.724151611328 2 394.724313 787.434072 -0.017502 -6.9086E-06 0.088447 3.4912E-05 0.070945 2.8004E-05 394.72428637394 37.608 1.1813 37.608 37.111 38.292 0 51 23 3 0 0 0 0.0023714 1 32021 103.29 77.177 1 51506000 2185 1752 2018 2048 2564 2564 APGLGLVLER 10 Unmodified _APGLGLVLER_ 0 0 0 Q9Y606 Q9Y606 Q9Y606 PUS1 tRNA pseudouridine synthase A, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 512.811218261719 2 512.811116 1023.60768 0.11077 5.6806E-05 -0.074928 -3.8424E-05 0.035845 1.8382E-05 512.811108690939 67.486 0.47112 67.486 67.189 67.66 0 22 9 3 0 0 0 0.0034025 1 74296 64.04 39.885 1 7514900 2186 4130 2019 2049 2565 2565 APGPGLAQGLPQLHSLVLR 19 Unmodified _APGPGLAQGLPQLHSLVLR_ 0 0 0 Q8N1G4 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 MULTI-MSMS 210214_Eclipse_Hela_QC 642.377380371094 3 642.042415 1923.10542 1.1085 0.00071171 0.30379 0.00019504 1.4123 0.00090675 642.376879028962 84.923 0.74611 84.923 84.599 85.346 0 47 14 4 0 0 0 0.034698 1 98539 21.803 18.309 1 18776000 2187 2671 2020 2050 2566 2566 APGQLALFSVSDK 13 Unmodified _APGQLALFSVSDK_ 0 0 0 P31939 P31939 P31939 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase MULTI-MSMS 210214_Eclipse_Hela_QC 666.861877441406 2 666.861534 1331.70852 0.8572 0.00057164 -0.75285 -0.00050205 0.10435 6.9589E-05 666.861394627454 73.834 0.89661 73.834 73.36 74.256 0 61 17 5 0 0 0 0.0045327 1 83159 64.64 64.64 1 27298000 2188 1148 2021 2051 2567 2567 APGQLECETAIAALNSCLR 19 Unmodified _APGQLECETAIAALNSCLR_ 0 0 0 Q9Y490 Q9Y490 Q9Y490 TLN1 Talin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 1038.00891113281 2 1037.50643 2072.99831 1.0041 0.0010418 -0.73649 -0.00076412 0.26762 0.00027766 1038.00765691684 88.761 0.59666 88.761 88.467 89.063 0 49 11 5 0 0 0 8.4655E-09 1 103894 112.15 98.19 1 15942000 2189 4084 2022 2052 2568 2568 APGSAGHYELPWVEK 15 Unmodified _APGSAGHYELPWVEK_ 0 0 0 P35250 P35250 P35250 RFC2 Replication factor C subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 547.941589355469 3 547.607095 1639.79946 0.72169 0.0003952 -0.24646 -0.00013496 0.47523 0.00026024 547.606885875229 58.919 0.64746 58.919 58.557 59.204 0 28 12 3 0 0 0 0.0041956 1 62248 28.549 22.141 1 8472200 2190 1183 2023 2053 2569 2569 APGSLVISAYAVCPDITATVTPDLK 25 Unmodified _APGSLVISAYAVCPDITATVTPDLK_ 0 0 0 O15067 O15067 O15067 PFAS Phosphoribosylformylglycinamidine synthase MULTI-MSMS 210214_Eclipse_Hela_QC 1280.67553710938 2 1280.17237 2558.33019 1.4476 0.0018532 -1.2503 -0.0016006 0.19734 0.00025263 1280.67250169061 106.24 0.24871 106.24 106.12 106.37 0 16 4 5 0 0 0 0.00048771 1 128251 49.463 37.548 1 23007000 2191 235 2024 2054 2570 2570 APGTNVAMASNQAVR 15 Unmodified _APGTNVAMASNQAVR_ 0 0 0 P49792 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 MULTI-MSMS 210214_Eclipse_Hela_QC 743.875610351562 2 743.875182 1485.73581 0.80868 0.00060156 -0.011555 -8.5953E-06 0.79713 0.00059296 743.87536208499 31.138 0.49796 31.138 30.923 31.421 0 21 9 3 0 0 0 3.4916E-05 1 23045 93.345 75.481 1 8948200 2192 1397 2025 2055 2571 2571 APHLAYLR 8 Unmodified _APHLAYLR_ 0 0 0 Q9BWD1 Q9BWD1 Q9BWD1 ACAT2 Acetyl-CoA acetyltransferase, cytosolic MSMS 210214_Eclipse_Hela_QC 470.7724609375 2 470.771794 939.529036 NaN NaN NaN NaN NaN NaN NaN 28.487 1 28.487 27.987 28.987 0 0 0 0 0.036523 1 19267 60.358 39.487 1 2193 3328 2026 2056 2572 2572 APIDTSDVEEK 11 Unmodified _APIDTSDVEEK_ 0 0 0 Q06265 Q06265 Q06265 EXOSC9 Exosome complex component RRP45 MULTI-MSMS 210214_Eclipse_Hela_QC 602.289916992188 2 602.290608 1202.56666 0.4018 0.000242 1.6676 0.0010044 2.0694 0.0012464 602.291341312577 29.28 0.58516 29.28 28.944 29.529 0 33 11 4 0 0 0 3.3117E-05 1 20359 106.2 81.061 1 9274100 2194 1865 2027 2057 2573 2573 APIFTSEQGEK 11 Unmodified _APIFTSEQGEK_ 0 0 0 P16333 P16333 P16333 NCK1 Cytoplasmic protein NCK1 MSMS 210214_Eclipse_Hela_QC 603.805236816406 2 603.803685 1205.59282 NaN NaN NaN NaN NaN NaN NaN 29.59 1 29.59 29.09 30.09 0 0 0 0 0.015679 1 20828 57.59 42.439 1 2195 917 2028 2058 2574 2574 APIIAVTR 8 Unmodified _APIIAVTR_ 0 0 0 P14618 P14618 P14618 PKM Pyruvate kinase PKM MULTI-MSMS 210214_Eclipse_Hela_QC 420.768890380859 2 420.76872 839.522887 -0.082236 -3.4602E-05 -0.56016 -0.0002357 -0.6424 -0.0002703 420.768589139223 36.449 1.2349 36.449 36.025 37.26 0 87 24 5 0 0 0 0.00013199 2 30266 143.02 108.31 1 975330000 2196 882 2029 2059 2575;2576 2575 APIICVLGHVDTGK 14 Unmodified _APIICVLGHVDTGK_ 0 0 0 O60841 O60841 O60841 EIF5B Eukaryotic translation initiation factor 5B MULTI-MSMS 210214_Eclipse_Hela_QC 493.937744140625 3 493.937788 1478.79153 0.53147 0.00026251 0.61436 0.00030346 1.1458 0.00056597 493.937668270052 61.172 1.3422 61.172 60.398 61.741 0 72 26 5 0 0 0 0.00022983 1 65335 63.29 58.111 1 15804000 2197 401 2030 2060 2577 2577 APIICVLGHVDTGK 14 Unmodified _APIICVLGHVDTGK_ 0 0 0 O60841 O60841 O60841 EIF5B Eukaryotic translation initiation factor 5B MULTI-MSMS 210214_Eclipse_Hela_QC 740.403686523438 2 740.403044 1478.79153 1.018 0.0007537 -0.33787 -0.00025016 0.68009 0.00050354 740.402827335922 61.128 0.5958 61.128 60.846 61.442 0 21 11 3 0 0 0 0.0030183 1 65499 51.252 41.299 1 2379700 2198 401 2030 2060 2578 2578 APILIATDVASR 12 Unmodified _APILIATDVASR_ 0 0 0 P17844;Q92841 P17844;Q92841 Q92841 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 210214_Eclipse_Hela_QC 614.360534667969 2 613.858795 1225.70304 0.046839 2.8753E-05 0.20455 0.00012556 0.25138 0.00015431 613.858922394773 62.343 0.98625 62.343 61.89 62.876 0 65 19 5 0 0 0 1.1907E-13 2 66942 150.35 130.56 1 140330000 2199 2912;941 2031 2061 2579;2580 2579 APIQDIWYHEDR 12 Unmodified _APIQDIWYHEDR_ 0 0 0 Q9Y3D9 Q9Y3D9 Q9Y3D9 MRPS23 28S ribosomal protein S23, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 515.593566894531 3 514.91604 1541.72629 0.3022 0.00015561 -0.61633 -0.00031736 -0.31414 -0.00016175 514.91603318255 56.293 1.0953 56.293 55.919 57.014 0 39 21 3 0 0 0 0.00071719 1 58554 61.375 50.765 1 9097600 2200 4066 2032 2062 2581 2581 APIQTYVLGANNQETVK 17 Unmodified _APIQTYVLGANNQETVK_ 0 0 0 Q69YN2 Q69YN2 Q69YN2 CWF19L1 CWF19-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 923.991516113281 2 923.48889 1844.96323 1.1265 0.0010403 0.43228 0.0003992 1.5588 0.0014395 923.99085285515 61.3 0.44707 61.3 60.995 61.442 0 19 8 3 0 0 0 0.0061236 2 65623 38.634 32.789 1 5493300 2201 2404 2033 2063 2582;2583 2582 APIQWEER 8 Unmodified _APIQWEER_ 0 0 0 P50213 P50213 P50213 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 515.263305664062 2 514.761623 1027.50869 0.2486 0.00012797 0.26352 0.00013565 0.51212 0.00026362 514.761669008352 36.808 1.0336 36.808 36.273 37.306 0 55 20 4 0 0 0 0.0017507 2 30983 108.46 88.674 1 35664000 2202 1408 2034 2064 2584;2585 2584 APIRPDIVNFVHTNLR 16 Unmodified _APIRPDIVNFVHTNLR_ 0 0 1 P36578 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 210214_Eclipse_Hela_QC 466.515991210938 4 466.265339 1861.03225 0.52969 0.00024698 -0.045379 -2.1159E-05 0.48431 0.00022582 466.516039454045 68.48 1.7177 68.48 68.207 69.924 0 115 34 6 0 0 0 5.7075E-05 3 75676 81.992 76.088 1 166790000 2203 1208 2035 2065 2586;2587;2588 2586 APIRPDIVNFVHTNLR 16 Unmodified _APIRPDIVNFVHTNLR_ 0 0 1 P36578 P36578 P36578 RPL4 60S ribosomal protein L4 MULTI-MSMS 210214_Eclipse_Hela_QC 621.685607910156 3 621.35136 1861.03225 0.5694 0.0003538 -0.49261 -0.00030609 0.076784 4.771E-05 621.350188957975 68.48 0.82183 68.48 68.256 69.078 0 41 16 4 0 0 0 0.03882 1 75785 33.666 28.371 1 12486000 2204 1208 2035 2065 2589 2589 APIVTVGVNNDPADVR 16 Unmodified _APIVTVGVNNDPADVR_ 0 0 0 Q9BPX3 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 MULTI-MSMS 210214_Eclipse_Hela_QC 818.934448242188 2 818.936293 1635.85803 0.99861 0.0008178 -1.2179 -0.00099742 -0.21933 -0.00017962 818.934701474059 60.047 0.84711 60.047 59.501 60.349 0 34 16 3 0 0 0 0.0077788 1 63901 39.006 19.763 1 8329000 2205 3209 2036 2066 2590 2590 APKPDGPGGGPGGSHMGGNYGDDR 24 Unmodified _APKPDGPGGGPGGSHMGGNYGDDR_ 0 0 1 P35637 P35637 P35637 FUS RNA-binding protein FUS MULTI-MSMS 210214_Eclipse_Hela_QC 752.331298828125 3 751.662774 2251.96649 0.73511 0.00055256 -0.25107 -0.00018872 0.48404 0.00036384 751.99697677578 20.988 0.64739 20.988 20.812 21.46 0 54 12 6 0 0 0 7.7813E-55 1 8457 194.21 189.6 1 157240000 2206 1195 2037 2067 2591 2591 APKPDGPGGGPGGSHMGGNYGDDR 24 Unmodified _APKPDGPGGGPGGSHMGGNYGDDR_ 0 0 1 P35637 P35637 P35637 FUS RNA-binding protein FUS MULTI-MSMS 210214_Eclipse_Hela_QC 563.999328613281 4 563.998899 2251.96649 0.35547 0.00020048 -0.33776 -0.00019049 0.017711 9.9888E-06 564.249550332353 20.987 0.59765 20.987 20.762 21.36 0 44 11 6 0 0 0 1.4916E-24 3 8508 142.42 140.74 1 61463000 2207 1195 2037 2067 2592;2593;2594 2594 APKPDGPGGGPGGSHMGGNYGDDR 24 Unmodified _APKPDGPGGGPGGSHMGGNYGDDR_ 0 0 1 P35637 P35637 P35637 FUS RNA-binding protein FUS MULTI-MSMS 210214_Eclipse_Hela_QC 1127.49328613281 2 1126.99052 2251.96649 0.37219 0.00041945 -0.13487 -0.000152 0.23731 0.00026745 1127.49205993725 20.986 0.49802 20.986 20.812 21.31 0 31 9 5 0 0 0 2.2985E-16 1 8525 149.73 146.78 1 20979000 2208 1195 2037 2067 2595 2595 APKPEDIDEEDDDVPDLVENFDEASK 26 Unmodified _APKPEDIDEEDDDVPDLVENFDEASK_ 0 0 1 Q96K17 Q96K17 Q96K17 BTF3L4 Transcription factor BTF3 homolog 4 MULTI-MSMS 210214_Eclipse_Hela_QC 978.10302734375 3 977.768244 2930.2829 1.0646 0.0010409 0.54631 0.00053416 1.6109 0.0015751 978.102932381526 88.69 0.93437 88.69 88.279 89.213 0 90 18 7 0 0 0 7.0803E-11 1 103736 96.338 95.376 1 99614000 2209 3082 2038 2068 2596 2596 APLATGEDDDDEVPDLVENFDEASK 25 Unmodified _APLATGEDDDDEVPDLVENFDEASK_ 0 0 0 P20290 P20290 P20290 BTF3 Transcription factor BTF3 MULTI-MSMS 210214_Eclipse_Hela_QC 1346.599609375 2 1346.09322 2690.1719 2.0591 0.0027717 0.3545 0.00047719 2.4136 0.0032489 1346.5950821977 100.53 1.1937 100.53 100.15 101.35 0 105 23 7 0 0 0 5.3033E-18 2 120132 125.5 124.64 1 82050000 2210 976 2039 2069 2597;2598 2597 APLATGEDDDDEVPDLVENFDEASK 25 Unmodified _APLATGEDDDDEVPDLVENFDEASK_ 0 0 0 P20290 P20290 P20290 BTF3 Transcription factor BTF3 MULTI-MSMS 210214_Eclipse_Hela_QC 897.733642578125 3 897.731242 2690.1719 1.3418 0.0012045 0.55717 0.00050019 1.8989 0.0017047 898.06592289784 100.63 0.59628 100.63 100.25 100.85 0 37 11 4 0 0 0 0.041834 1 120284 11.252 7.9168 1 4572200 2211 976 2039 2069 2599 2599 APLAVTSQVINCR 13 Unmodified _APLAVTSQVINCR_ 0 0 0 P42695 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 210214_Eclipse_Hela_QC 714.886474609375 2 714.885018 1427.75548 0.8105 0.00057941 0.20454 0.00014622 1.015 0.00072563 714.88498411368 54.627 0.39802 54.627 54.426 54.824 0 9 7 2 0 0 0 0.053115 1 56426 32.008 1.8417 1 3315500 2212 1276 2040 2070 2600 2600 APLDIPIPDPPPK 13 Unmodified _APLDIPIPDPPPK_ 0 0 0 Q9UL46 Q9UL46 Q9UL46 PSME2 Proteasome activator complex subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 685.389526367188 2 685.389928 1368.7653 0.45879 0.00031445 -0.79785 -0.00054684 -0.33906 -0.00023239 685.389263282467 80.383 1.3421 80.383 79.662 81.004 0 71 26 4 0 0 0 0.017737 1 92204 51.436 44.308 1 15872000 2213 3927 2041 2071 2601 2601 APLDIPIPDPPPKDDEMETDK 21 Unmodified _APLDIPIPDPPPKDDEMETDK_ 0 0 1 Q9UL46 Q9UL46 Q9UL46 PSME2 Proteasome activator complex subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 778.712646484375 3 778.378758 2332.11444 1.185 0.00092238 -0.24982 -0.00019445 0.93519 0.00072793 778.713014193217 77.083 1.3438 77.083 76.527 77.871 0 119 26 6 0 0 0 0.00029726 1 87437 55.206 47.494 1 50521000 2214 3927 2042 2072 2602 2602 APLDIPVPDPVK 12 Unmodified _APLDIPVPDPVK_ 0 0 0 Q06323 Q06323 Q06323 PSME1 Proteasome activator complex subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 630.864562988281 2 630.863546 1259.71254 1.2312 0.00077672 -0.019237 -1.2136E-05 1.212 0.00076458 630.863472247602 81.774 0.99393 81.774 81.252 82.246 0 71 19 5 0 0 0 0.00058998 2 93953 68.657 47.608 1 68932000 2215 1866 2043 2073 2603;2604 2603 APLEHELAGEPQLR 14 Unmodified _APLEHELAGEPQLR_ 0 0 0 O95833 O95833 O95833 CLIC3 Chloride intracellular channel protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 520.946594238281 3 520.610728 1558.81036 0.34571 0.00017998 1.3917 0.00072454 1.7374 0.00090452 520.611532047916 44.957 0.69719 44.957 44.587 45.284 0 25 13 2 0 0 0 0.0046282 1 42511 39.746 26.61 1 19361000 2216 602 2044 2074 2605 2605 APLEVAQEH 9 Unmodified _APLEVAQEH_ 0 0 0 O94903 O94903 O94903 PROSC Proline synthase co-transcribed bacterial homolog protein MULTI-MSMS 210214_Eclipse_Hela_QC 497.253875732422 2 497.253631 992.49271 -0.077811 -3.8692E-05 0.77874 0.00038723 0.70093 0.00034854 497.254015527203 26.532 0.34853 26.532 26.358 26.707 0 11 6 2 0 0 0 0.0021494 1 16506 77.318 66.903 1 6620600 2217 523 2045 2075 2606 2606 APLEVPQALGR 11 Unmodified _APLEVPQALGR_ 0 0 0 Q6UVK1 Q6UVK1 Q6UVK1 CSPG4 Chondroitin sulfate proteoglycan 4 MULTI-MSMS 210214_Eclipse_Hela_QC 575.832763671875 2 575.83258 1149.65061 1.1098 0.00063908 -0.42657 -0.00024563 0.68328 0.00039345 575.832365922308 57.835 0.54735 57.835 57.562 58.109 0 25 10 3 0 0 0 0.0079777 1 60788 51.066 36.393 1 9404300 2218 2476 2046 2076 2607 2607 APLNIPGTPVLEDFPQNDDEK 21 Unmodified _APLNIPGTPVLEDFPQNDDEK_ 0 0 0 Q15003 Q15003 Q15003 NCAPH Condensin complex subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 1155.56982421875 2 1155.06843 2308.12231 1.2341 0.0014255 -0.90158 -0.0010414 0.33257 0.00038414 1155.56860825243 97.107 0.44806 97.107 96.969 97.417 0 21 8 4 0 0 0 0.00011277 1 115579 86.467 74.675 1 6552100 2219 2126 2047 2077 2608 2608 APLNVQFNSPLPGDAVK 17 Unmodified _APLNVQFNSPLPGDAVK_ 0 0 0 O75369 O75369 O75369 FLNB Filamin-B MULTI-MSMS 210214_Eclipse_Hela_QC 883.977844238281 2 883.975419 1765.93628 1.5934 0.0014086 -0.84074 -0.0007432 0.75269 0.00066536 884.47607322199 80.926 0.94354 80.926 80.309 81.252 0 70 18 5 0 0 0 1.274E-66 1 93166 278.27 253.98 1 123370000 2220 445 2048 2078 2609 2609 APLNVTNTAGTSLPSVDLLQK 21 Unmodified _APLNVTNTAGTSLPSVDLLQK_ 0 0 0 Q9NPI6 Q9NPI6 Q9NPI6 DCP1A mRNA-decapping enzyme 1A MULTI-MSMS 210214_Eclipse_Hela_QC 1070.59313964844 2 1070.08643 2138.1583 0.84967 0.00090922 1.4646 0.0015673 2.3143 0.0024765 1070.58984801942 91.235 0.39767 91.235 91.052 91.449 0 24 7 4 0 0 0 0.0019082 1 107477 41.644 36.753 1 3572900 2221 3588 2049 2079 2610 2610 APLPDLYPFGTMR 13 Unmodified _APLPDLYPFGTMR_ 0 0 0 Q92841 Q92841 Q92841 DDX17 Probable ATP-dependent RNA helicase DDX17 MULTI-MSMS 210214_Eclipse_Hela_QC 739.378784179688 2 739.379037 1476.74352 0.83177 0.00061499 -0.027321 -2.0201E-05 0.80445 0.00059479 739.379097454575 95.936 1.5969 95.936 95.372 96.969 0 86 32 5 0 0 0 3.2559E-05 2 113784 98.943 65.714 1 31629000 2222 2912 2050 2080 2611;2612 2612 APLQGDHNHLFIR 13 Unmodified _APLQGDHNHLFIR_ 0 0 0 Q8WVC0 Q8WVC0 Q8WVC0 LEO1 RNA polymerase-associated protein LEO1 MULTI-MSMS 210214_Eclipse_Hela_QC 380.204498291016 4 380.20475 1516.78989 -0.22105 -8.4043E-05 0.12299 4.6762E-05 -0.098056 -3.7281E-05 380.204687270416 33.256 0.98424 33.256 32.932 33.916 0 25 19 2 0 0 0 0.040921 1 26045 19.74 6.3366 1 3582800 2223 2837 2051 2081 2613 2613 APLQQCAEDR 10 Unmodified _APLQQCAEDR_ 0 0 0 Q15003 Q15003 Q15003 NCAPH Condensin complex subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 594.779052734375 2 594.277312 1186.54007 0.22052 0.00013105 -0.28301 -0.00016818 -0.062483 -3.7132E-05 594.27708410635 19.988 0.54657 19.988 19.668 20.214 0 20 10 3 0 0 0 0.00066625 1 7076 83.647 71.411 1 7822800 2224 2126 2052 2082 2614 2614 APLVCLPVFVSR 12 Unmodified _APLVCLPVFVSR_ 0 0 0 Q9H0W9 Q9H0W9 Q9H0W9 C11orf54 Ester hydrolase C11orf54 MULTI-MSMS 210214_Eclipse_Hela_QC 679.386779785156 2 679.386665 1356.75878 1.2911 0.00087719 -0.60995 -0.00041439 0.68119 0.00046279 679.386209112653 96.566 0.89467 96.566 96.075 96.969 0 50 17 4 0 0 0 0.018511 1 114613 45.598 45.598 1 12789000 2225 3422 2053 2083 2615 2615 APLVLKD 7 Unmodified _APLVLKD_ 0 0 1 Q99497 Q99497 Q99497 PARK7 Protein deglycase DJ-1 MULTI-MSMS 210214_Eclipse_Hela_QC 378.236663818359 2 378.236722 754.45889 -0.3138 -0.00011869 0.51136 0.00019341 0.19755 7.4722E-05 378.236856983239 31.594 1.2387 31.594 30.923 32.162 0 48 24 3 0 0 0 0.038498 1 23498 73.637 17.546 1 112340000 2226 3163 2054 2084 2616 2616 APLYDLAAHEDK 12 Unmodified _APLYDLAAHEDK_ 0 0 0 Q9GZL7 Q9GZL7 Q9GZL7 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 210214_Eclipse_Hela_QC 448.226226806641 3 448.226103 1341.65648 -0.28514 -0.00012781 0.10947 4.9069E-05 -0.17567 -7.8739E-05 448.226155972442 41.283 0.89466 41.283 40.86 41.755 0 51 17 4 0 0 0 0.0019352 1 37320 52.265 43.536 1 19358000 2227 3386 2055 2085 2617 2617 APLYDLAAHEDK 12 Unmodified _APLYDLAAHEDK_ 0 0 0 Q9GZL7 Q9GZL7 Q9GZL7 WDR12 Ribosome biogenesis protein WDR12 MULTI-MSMS 210214_Eclipse_Hela_QC 671.835876464844 2 671.835517 1341.65648 0.21958 0.00014752 0.17964 0.00012069 0.39922 0.00026821 671.835720702927 41.255 0.44686 41.255 41.059 41.506 0 14 8 2 0 0 0 0.036966 1 37517 42.161 33.628 1 3797800 2228 3386 2055 2085 2618 2618 APMFSWPR 8 Unmodified _APMFSWPR_ 0 0 0 P31327 P31327 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 496.244812011719 2 496.244555 990.474557 0.29126 0.00014454 0.19144 9.5003E-05 0.48271 0.00023954 496.244678030644 68.728 1.6181 68.728 68.306 69.924 0 86 32 5 0 0 0 0.035996 1 75757 47.082 39.078 1 69882000 2229 1141 2056 2086 2619 2619 APMVNPTLGVHEADLLK 17 Unmodified _APMVNPTLGVHEADLLK_ 0 0 0 Q13423 Q13423 Q13423 NNT NAD(P) transhydrogenase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 602.325561523438 3 602.325711 1803.9553 0.9279 0.0005589 -0.34852 -0.00020992 0.57938 0.00034898 602.659873151016 71.243 0.9467 71.243 70.969 71.916 0 52 18 5 0 0 0 7.0518E-05 1 79571 61.265 57.645 1 36149000 2230 1982 2057 2087 2620 2620 APNDFNLR 8 Unmodified _APNDFNLR_ 0 0 0 P06737 P06737 P06737 PYGL Glycogen phosphorylase, liver form MULTI-MSMS 210214_Eclipse_Hela_QC 473.741027832031 2 473.740691 945.466829 0.24202 0.00011465 0.11534 5.4641E-05 0.35736 0.00016929 473.740717961011 34.419 0.97901 34.419 34.016 34.995 0 36 20 3 0 0 0 0.0033343 1 27625 89.046 60.624 1 19462000 2231 704 2058 2088 2621 2621 APNISMPDVDLNLK 14 Unmodified _APNISMPDVDLNLK_ 0 0 0 Q09666 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK MULTI-MSMS 210214_Eclipse_Hela_QC 764.400268554688 2 763.897791 1525.78103 0.83727 0.00063959 1.9892 0.0015195 2.8265 0.0021591 763.898035745731 86.621 1.4416 86.621 86.19 87.632 0 52 28 3 0 0 0 1.2207E-13 1 100914 136.96 123.53 1 25070000 2232 1896 2059 2089 2622 2622 APNTPASGANGDGSMSQTQSGSTVK 25 Oxidation (M) _APNTPASGANGDGSM(Oxidation (M))SQTQSGSTVK_ APNTPASGANGDGSM(1)SQTQSGSTVK APNTPASGANGDGSM(77)SQTQSGSTVK 0 1 0 CON__P15636 CON__P15636 CON__P15636 MULTI-MSMS 210214_Eclipse_Hela_QC 1184.03051757812 2 1183.52987 2365.0452 1.8107 0.002143 -0.089934 -0.00010644 1.7208 0.0020366 1184.03117457718 16.28 0.71463 16.28 16.191 16.906 0 216 53 5 0 0 0 2.0583E-06 1 2882 76.85 65.058 1 32618000 + 2233 65 2060 2090 2623 2623 27 APNTPASGANGDGSMSQTQSGSTVK 25 Oxidation (M) _APNTPASGANGDGSM(Oxidation (M))SQTQSGSTVK_ APNTPASGANGDGSM(1)SQTQSGSTVK APNTPASGANGDGSM(59)SQTQSGSTVK 0 1 0 CON__P15636 CON__P15636 CON__P15636 MULTI-MSMS 210214_Eclipse_Hela_QC 1184.03137207031 2 1183.52987 2365.0452 -0.13164 -0.0001558 -0.1836 -0.00021729 -0.31524 -0.00037309 1183.52988639334 25.204 0.64649 25.204 24.965 25.611 0 43 12 6 0 0 0 0.00025682 1 14540 58.98 49.192 1 25014000 + 2234 65 2060 2090 2624 2624 27 APNTPASGANGDGSMSQTQSGSTVK 25 Unmodified _APNTPASGANGDGSMSQTQSGSTVK_ 0 0 0 CON__P15636 CON__P15636 CON__P15636 MULTI-MSMS 210214_Eclipse_Hela_QC 1176.03479003906 2 1175.53242 2349.05028 -0.37342 -0.00043897 -0.44442 -0.00052242 -0.81783 -0.00096139 1176.03337562453 25.189 1.2431 25.189 24.915 26.158 0 99 24 7 0 0 0 2.3905E-155 1 14409 294.05 291.39 1 465330000 + 2235 65 2060 2091 2625 2625 APNTPDILEIEFK 13 Unmodified _APNTPDILEIEFK_ 0 0 0 P00966 P00966 P00966 ASS1 Argininosuccinate synthase MULTI-MSMS 210214_Eclipse_Hela_QC 744.394470214844 2 743.893032 1485.77151 1.2874 0.00095767 -0.19592 -0.00014574 1.0915 0.00081193 743.892909687832 90.878 1.7401 90.878 90.306 92.046 0 108 34 5 0 0 0 4.6119E-14 2 106696 149.38 113.87 1 297330000 2236 633 2061 2092 2626;2627 2626 APNTPDILEIEFKK 14 Unmodified _APNTPDILEIEFKK_ 0 0 1 P00966 P00966 P00966 ASS1 Argininosuccinate synthase MULTI-MSMS 210214_Eclipse_Hela_QC 538.963073730469 3 538.962768 1613.86647 0.86766 0.00046764 -0.21986 -0.00011849 0.64781 0.00034914 538.962755339581 71.932 0.9949 71.932 71.518 72.513 0 77 19 6 0 0 0 0.00020234 1 80332 54.598 34.491 1 89564000 2237 633 2062 2093 2628 2628 APNYSCVMTGSWDK 14 Unmodified _APNYSCVMTGSWDK_ 0 0 0 P78406 P78406 P78406 RAE1 mRNA export factor MULTI-MSMS 210214_Eclipse_Hela_QC 808.349304199219 2 808.347608 1614.68066 1.0105 0.00081687 -0.66757 -0.00053963 0.34298 0.00027724 808.347580909312 62.702 0.6459 62.702 62.429 63.075 0 39 12 5 0 0 0 1.3288E-06 1 67584 109.24 103.74 1 20769000 2238 1750 2063 2094 2629 2629 APPAPLAASEVTNSNSAER 19 Unmodified _APPAPLAASEVTNSNSAER_ 0 0 0 Q9Y2U8 Q9Y2U8 Q9Y2U8 LEMD3 Inner nuclear membrane protein Man1 MULTI-MSMS 210214_Eclipse_Hela_QC 941.970825195312 2 941.468686 1880.92282 1.017 0.00095744 -0.18849 -0.00017746 0.82848 0.00077998 942.47129353203 45.446 0.54712 45.446 45.185 45.732 0 26 10 3 0 0 0 2.3878E-05 1 43395 79.633 58.403 1 6288500 2239 4019 2064 2095 2630 2630 APPAVMAAVDQALK 14 Unmodified _APPAVMAAVDQALK_ 0 0 0 Q9NUI1 Q9NUI1 Q9NUI1 DECR2 Peroxisomal 2,4-dienoyl-CoA reductase MULTI-MSMS 210214_Eclipse_Hela_QC 691.379638671875 2 691.379037 1380.74352 0.98302 0.00067964 0.69347 0.00047945 1.6765 0.0011591 691.379703231949 83.131 0.79646 83.131 82.757 83.554 0 33 15 3 0 0 0 0.014173 1 96182 53.211 41.364 1 2999400 2240 3655 2065 2096 2631 2631 APPDGWELIEPTLDELDQK 19 Unmodified _APPDGWELIEPTLDELDQK_ 0 0 0 P41223 P41223 P41223 BUD31 Protein BUD31 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 1084.03698730469 2 1083.53369 2165.05283 1.1143 0.0012073 0.12336 0.00013366 1.2376 0.001341 1084.03535581348 107.33 0.44792 107.33 107.06 107.51 0 27 8 5 0 0 0 0.030176 1 129803 48.467 43.082 1 32471000 2241 1255 2066 2097 2632 2632 APPFHPPGPMPSVGSMPSAGPMPSAGPMPSAGPVPSAR 38 Unmodified _APPFHPPGPMPSVGSMPSAGPMPSAGPMPSAGPVPSAR_ 0 0 0 Q8IZL8 Q8IZL8 Q8IZL8 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1203.248046875 3 1202.57686 3604.70876 1.2086 0.0014534 -0.27922 -0.00033578 0.92935 0.0011176 1203.24515677865 91.005 0.64629 91.005 90.704 91.35 0 39 12 4 0 0 0 1.4562E-05 2 107114 44.347 42.685 1 7490700 2242 2660 2067 2098 2633;2634 2634 APPGAPGPGPGSGAPGSQEEEEEPGLVEGDPGDGAIEDPELEAIK 45 Unmodified _APPGAPGPGPGSGAPGSQEEEEEPGLVEGDPGDGAIEDPELEAIK_ 0 0 0 Q86U42 Q86U42 Q86U42 PABPN1 Polyadenylate-binding protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 1437.00573730469 3 1435.99797 4304.97208 2.509 0.0036029 0.67667 0.00097169 3.1857 0.0045746 1437.00166906487 94.696 0.49207 94.696 94.383 94.875 0 35 9 6 0 0 0 0.0067522 2 112177 24.413 23.164 1 4138000 2243 2574 2068 2099 2635;2636 2635 APPGGAEAGEPTTLLQR 17 Unmodified _APPGGAEAGEPTTLLQR_ 0 0 0 P48382 P48382 P48382 RFX5 DNA-binding protein RFX5 MULTI-MSMS 210214_Eclipse_Hela_QC 833.437377929688 2 832.933751 1663.85295 1.6302 0.0013579 -0.061339 -5.1091E-05 1.5689 0.0013068 833.434926505739 53.278 0.44905 53.278 53.042 53.491 0 18 8 3 0 0 0 0.043002 1 54571 30.331 15.13 1 2529800 2244 1339 2069 2100 2637 2637 APPILPPHLLQVILNK 16 Unmodified _APPILPPHLLQVILNK_ 0 0 0 Q9Y478 Q9Y478 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 MULTI-MSMS 210214_Eclipse_Hela_QC 588.370300292969 3 588.36958 1762.08691 1.2204 0.00071806 -0.28653 -0.00016858 0.9339 0.00054948 588.703702047769 105 0.34958 105 104.78 105.13 0 18 6 4 0 0 0 0.010547 1 126477 34.82 34.131 1 5500600 2245 4083 2070 2101 2638 2638 APPLVENEEAEPGR 14 Unmodified _APPLVENEEAEPGR_ 0 0 0 O14908 O14908 O14908 GIPC1 PDZ domain-containing protein GIPC1 MULTI-MSMS 210214_Eclipse_Hela_QC 754.373718261719 2 754.372995 1506.73144 0.6547 0.00049389 0.44603 0.00033647 1.1007 0.00083036 754.373348180791 38.128 0.49754 38.128 37.894 38.392 0 22 9 3 0 0 0 2.0373E-06 1 32930 104.52 97.932 1 4132300 2246 216 2071 2102 2639 2639 APPNATLEHFYLTSGK 16 Unmodified _APPNATLEHFYLTSGK_ 0 0 0 Q96G23 Q96G23 Q96G23 CERS2 Ceramide synthase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 582.633544921875 3 582.633421 1744.87843 0.59467 0.00034648 -0.0011528 -6.7167E-07 0.59352 0.0003458 582.633354111821 58.682 0.94571 58.682 58.308 59.254 0 61 18 5 0 0 0 0.001259 1 61883 36.637 30.057 1 42478000 2247 3037 2072 2103 2640 2640 APPNYAMK 8 Unmodified _APPNYAMK_ 0 0 0 Q92541 Q92541 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 446.223754882812 2 446.223288 890.432024 0.14358 6.4067E-05 0.040208 1.7942E-05 0.18378 8.2009E-05 446.223221103141 22.28 0.4965 22.28 22.007 22.504 0 13 9 2 0 0 0 0.053074 1 10424 40.573 20.726 1 4979600 2248 2880 2073 2104 2641 2641 APPPGLPAETIK 12 Unmodified _APPPGLPAETIK_ 0 0 0 P11802 P11802 P11802 CDK4 Cyclin-dependent kinase 4 MULTI-MSMS 210214_Eclipse_Hela_QC 595.843811035156 2 595.842613 1189.67067 1.1072 0.00065972 -0.10931 -6.5133E-05 0.9979 0.00059459 595.842438325149 47.08 0.99444 47.08 46.777 47.771 0 41 19 3 0 0 0 0.045616 1 45708 33.961 12.11 1 5352600 2249 840 2074 2105 2642 2642 APPPLPPVYSMETETPTAEDIQLLK 25 Unmodified _APPPLPPVYSMETETPTAEDIQLLK_ 0 0 0 Q14738 Q14738 Q14738 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform MULTI-MSMS 210214_Eclipse_Hela_QC 1369.70581054688 2 1369.20387 2736.39319 1.0402 0.0014242 -0.84882 -0.0011622 0.19137 0.00026202 1369.70427704083 106 0.24915 106 105.87 106.12 0 11 4 3 0 0 0 0.046245 1 127985 23.419 17.877 1 19127000 2250 2109 2075 2106 2643 2643 APPPSLTDCIGTVDSR 16 Unmodified _APPPSLTDCIGTVDSR_ 0 0 0 Q9NZZ3 Q9NZZ3 Q9NZZ3 CHMP5 Charged multivesicular body protein 5 MULTI-MSMS 210214_Eclipse_Hela_QC 843.413146972656 2 843.411794 1684.80903 0.7046 0.00059427 0.099824 8.4193E-05 0.80443 0.00067846 843.411960950814 61.54 1.0918 61.54 60.995 62.087 0 63 21 4 0 0 0 0.00035005 2 65680 64.55 51.57 1 11249000 2251 3775 2076 2107 2644;2645 2644 APPQTHLPSGASSGTGSASATHGGGSPPGTR 31 Unmodified _APPQTHLPSGASSGTGSASATHGGGSPPGTR_ 0 0 0 P46379 P46379 P46379 BAG6 Large proline-rich protein BAG6 MULTI-MSMS 210214_Eclipse_Hela_QC 929.4482421875 3 929.113125 2784.31755 0.57324 0.00053261 -0.71739 -0.00066653 -0.14414 -0.00013393 929.446377923069 24.132 0.56958 24.132 23.899 24.469 0 14 11 2 0 0 0 0.024631 1 13089 19.379 16.18 1 7143900 2252 1308 2077 2108 2646 2646 APPSVFAEVPQAQPVLVFK 19 Unmodified _APPSVFAEVPQAQPVLVFK_ 0 0 0 P17174 P17174 P17174 GOT1 Aspartate aminotransferase, cytoplasmic MULTI-MSMS 210214_Eclipse_Hela_QC 1012.56585693359 2 1012.5644 2023.11425 1.5503 0.0015697 0.14028 0.00014205 1.6905 0.0017118 1013.06589309859 104.5 0.54695 104.5 104.23 104.78 0 41 10 5 0 0 0 3.7963E-08 1 125648 101.89 96.504 1 28631000 2253 929 2078 2109 2647 2647 APPTACYAGAAPAPSQVK 18 Unmodified _APPTACYAGAAPAPSQVK_ 0 0 0 P17676 P17676 P17676 CEBPB CCAAT/enhancer-binding protein beta MULTI-MSMS 210214_Eclipse_Hela_QC 879.440795898438 2 878.937979 1755.8614 0.55674 0.00048934 0.28903 0.00025404 0.84577 0.00074338 878.938270786369 40.728 0.59724 40.728 40.412 41.009 0 36 11 4 0 0 0 5.7171E-08 1 36622 126.1 119.21 1 13725000 2254 937 2079 2110 2648 2648 APPVDDAEVDELVLQTK 17 Unmodified _APPVDDAEVDELVLQTK_ 0 0 0 Q9UIG0 Q9UIG0 Q9UIG0 BAZ1B Tyrosine-protein kinase BAZ1B MULTI-MSMS 210214_Eclipse_Hela_QC 920.473937988281 2 919.972738 1837.93092 0.94926 0.00087329 0.32622 0.00030011 1.2755 0.0011734 919.973052593665 86.47 0.9446 86.47 85.991 86.936 0 53 18 4 0 0 0 0.00010522 1 100662 78.692 72.589 1 13238000 2255 3886 2080 2111 2649 2649 APPWVPAMGFTLAPSLGCFVGSR 23 Unmodified _APPWVPAMGFTLAPSLGCFVGSR_ 0 0 0 P30536 P30536 P30536 TSPO Translocator protein MULTI-MSMS 210214_Eclipse_Hela_QC 1210.11108398438 2 1209.60849 2417.20243 0.81671 0.0009879 3.1452 0.0038045 3.9619 0.0047924 1210.61574166101 109.09 0.54705 109.09 108.7 109.25 0 31 10 5 0 0 0 0.035847 1 132353 27.969 22.986 1 10709000 2256 1129 2081 2112 2650 2650 APQAPLHSVVQQLHGK 16 Unmodified _APQAPLHSVVQQLHGK_ 0 0 0 Q15418 Q15418 Q15418 RPS6KA1 Ribosomal protein S6 kinase alpha-1 MULTI-MSMS 210214_Eclipse_Hela_QC 570.653747558594 3 570.653039 1708.93729 0.23838 0.00013603 -0.20822 -0.00011882 0.030162 1.7212E-05 570.652838376586 36.178 0.63944 36.178 35.832 36.471 0 28 12 3 0 0 0 0.0031827 1 30244 40.801 23.52 1 6165400 2257 2183 2082 2113 2651 2651 APQETYADIGGLDNQIQEIK 20 Unmodified _APQETYADIGGLDNQIQEIK_ 0 0 0 P62191 P62191 P62191 PSMC1 26S protease regulatory subunit 4 MULTI-MSMS 210214_Eclipse_Hela_QC 1102.0517578125 2 1102.0475 2202.08044 0.87695 0.00096644 0.13119 0.00014458 1.0081 0.001111 1102.54899656865 82.834 0.58548 82.834 82.57 83.156 0 48 12 5 0 0 0 8.9357E-07 1 95619 92.939 85.737 1 31221000 2258 1642 2083 2114 2652 2652 APQFQESVGSFR 12 Unmodified _APQFQESVGSFR_ 0 0 0 Q5VT52 Q5VT52 Q5VT52 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 676.83349609375 2 676.833308 1351.65206 0.84294 0.00057053 -0.31985 -0.00021648 0.52309 0.00035405 676.833060213352 52.357 0.64706 52.357 52.096 52.743 0 25 12 3 0 0 0 0.00042834 1 53212 71.349 56.198 1 3126000 2259 2377 2084 2115 2653 2653 APQGVHLICYSQGGLVCR 18 Unmodified _APQGVHLICYSQGGLVCR_ 0 0 0 Q9UMR5 Q9UMR5 Q9UMR5 PPT2 Lysosomal thioesterase PPT2 MULTI-MSMS 210214_Eclipse_Hela_QC 672.673034667969 3 672.336505 2013.98768 1.1963 0.00080432 -1.8451 -0.0012405 -0.64876 -0.00043618 672.335531415451 58.203 0.69686 58.203 57.81 58.507 0 53 13 6 0 0 0 0.00015578 1 61271 57.525 47.776 1 10657000 2260 3944 2085 2116 2654 2654 APQHTAVGFK 10 Unmodified _APQHTAVGFK_ 0 0 0 O43242 O43242 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 MULTI-MSMS 210214_Eclipse_Hela_QC 528.285400390625 2 528.285266 1054.55598 -0.17656 -9.3272E-05 -0.056551 -2.9875E-05 -0.23311 -0.00012315 528.285013711002 19.299 0.84602 19.299 19.12 19.966 0 26 16 4 0 0 0 3.1189E-07 1 6116 140.17 103.77 1 11289000 2261 291 2086 2117 2655 2655 APQLTSPELMALTR 14 Unmodified _APQLTSPELMALTR_ 0 0 0 CON__Q3SZ57 CON__Q3SZ57 CON__Q3SZ57 MULTI-MSMS 210214_Eclipse_Hela_QC 764.915710449219 2 764.413608 1526.81266 1.4034 0.0010728 -1.8399 -0.0014064 -0.43647 -0.00033364 764.411925530325 81.178 0.597 81.178 80.904 81.501 0 30 11 3 0 0 0 0.0018228 1 93357 52.788 41.688 1 26009000 + 2262 100 2087 2118 2656 2656 APQQQPPPQQPPPPQPPPQQPPPPPSYSPAR 31 Unmodified _APQQQPPPQQPPPPQPPPQQPPPPPSYSPAR_ 0 0 0 Q9BUJ2 Q9BUJ2 Q9BUJ2 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1110.9033203125 3 1110.23357 3327.67889 1.0504 0.0011662 0.1989 0.00022083 1.2493 0.001387 1110.90229145616 57.275 0.94549 57.275 56.716 57.661 0 60 18 5 0 0 0 0.010121 2 59862 27.905 26.303 1 5396000 2263 3289 2088 2119 2657;2658 2658 APQQWATFAR 10 Unmodified _APQQWATFAR_ 0 0 0 Q9BYD1 Q9BYD1 Q9BYD1 MRPL13 39S ribosomal protein L13, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 588.301452636719 2 588.301447 1174.58834 1.2417 0.00073047 0.15008 8.829E-05 1.3917 0.00081876 588.301036590712 50.61 0.49667 50.61 50.38 50.876 0 18 9 3 0 0 0 0.029481 1 50729 40.994 13.17 1 3230900 2264 3357 2089 2120 2659 2659 APQVLVLAPTR 11 Unmodified _APQVLVLAPTR_ 0 0 0 Q9NR30 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 582.858459472656 2 582.858598 1163.70264 1.2117 0.00070623 -0.072584 -4.2306E-05 1.1391 0.00066392 582.858585190923 60.506 0.79663 60.506 60.099 60.896 0 50 15 4 0 0 0 0.00074424 2 64366 73.841 60.464 1 66834000 2265 3612 2090 2121 2660;2661 2660 APQVVAEAAK 10 Unmodified _APQVVAEAAK_ 0 0 0 O60832 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 MULTI-MSMS 210214_Eclipse_Hela_QC 492.279388427734 2 492.279649 982.544745 0.42636 0.00020989 -0.020458 -1.0071E-05 0.40591 0.00019982 492.279651304329 23.008 0.7975 23.008 22.653 23.451 0 28 15 3 0 0 0 1.4458E-07 1 11356 145.72 117.55 1 24322000 2266 400 2091 2122 2662 2662 APSAEVEMTAYVILAHVTAQPAPNPEDLK 29 Unmodified _APSAEVEMTAYVILAHVTAQPAPNPEDLK_ 0 0 0 CON__ENSEMBL:ENSBTAP00000024146 CON__ENSEMBL:ENSBTAP00000024146 CON__ENSEMBL:ENSBTAP00000024146 MULTI-MSMS 210214_Eclipse_Hela_QC 1021.85693359375 3 1021.52162 3061.54304 1.7163 0.0017533 0.067411 6.8862E-05 1.7837 0.0018221 1021.85610000095 107.29 0.24902 107.29 107.16 107.41 0 20 4 6 0 0 0 1.0788E-11 2 129712 89.029 82.231 1 19225000 + 2267 38 2092 2123 2663;2664 2663 APSAGSDFAATSGTLTVTNLLEK 23 Unmodified _APSAGSDFAATSGTLTVTNLLEK_ 0 0 0 Q8NB90 Q8NB90 Q8NB90 SPATA5 Spermatogenesis-associated protein 5 MULTI-MSMS 210214_Eclipse_Hela_QC 1126.58020019531 2 1126.07625 2250.13796 0.98021 0.0011038 0.15558 0.0001752 1.1358 0.001279 1126.57778499108 96.379 0.44676 96.379 96.124 96.571 0 22 8 3 0 0 0 0.00061682 1 114555 49.31 41.399 1 2566200 2268 2723 2093 2124 2665 2665 APSDLYQIILK 11 Unmodified _APSDLYQIILK_ 0 0 0 P07384 P07384 P07384 CAPN1 Calpain-1 catalytic subunit MULTI-MSMS 210214_Eclipse_Hela_QC 630.865600585938 2 630.863546 1259.71254 0.6712 0.00042343 0.29899 0.00018862 0.97019 0.00061205 630.863720046757 89.585 0.79482 89.585 89.362 90.157 0 48 15 4 0 0 0 0.0026886 1 105084 60.899 45.651 1 28902000 2269 721 2094 2125 2666 2666 APSDSSLGTPSDGRPELR 18 Unmodified _APSDSSLGTPSDGRPELR_ 0 0 1 Q15642 Q15642 Q15642 TRIP10 Cdc42-interacting protein 4 MULTI-MSMS 210214_Eclipse_Hela_QC 614.971984863281 3 614.637783 1840.89152 0.36496 0.00022432 0.5097 0.00031328 0.87467 0.0005376 614.972156157663 34.749 0.5367 34.749 34.458 34.995 0 27 11 3 0 0 0 0.001438 1 28179 40.798 35.896 1 8547100 2270 2202 2095 2126 2667 2667 APSEEDSLSSVPISPYK 17 Unmodified _APSEEDSLSSVPISPYK_ 0 0 0 Q9Y676 Q9Y676 Q9Y676 MRPS18B 28S ribosomal protein S18b, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 903.444763183594 2 903.443814 1804.87307 1.3912 0.0012569 0.29539 0.00026687 1.6866 0.0015238 903.44412352774 68.03 0.5964 68.03 67.71 68.306 0 30 11 4 0 0 0 0.00037823 1 75076 79.492 76.067 1 9806300 2271 4137 2096 2127 2668 2668 APSENWAMEGGMDPESLLEGDDGK 24 Unmodified _APSENWAMEGGMDPESLLEGDDGK_ 0 0 0 P26358 P26358 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1268.5380859375 2 1268.03614 2534.05773 2.1837 0.002769 -0.12879 -0.00016331 2.0549 0.0026057 1268.53755660932 104.21 0.54697 104.21 103.88 104.43 0 34 10 4 0 0 0 8.196E-05 1 125288 61.641 59.215 1 3446700 2272 1056 2097 2128 2669 2669 APSIIFIDELDAIGTK 16 Unmodified _APSIIFIDELDAIGTK_ 0 0 0 P17980 P17980 P17980 PSMC3 26S protease regulatory subunit 6A MULTI-MSMS 210214_Eclipse_Hela_QC 851.968872070312 2 851.966728 1701.9189 2.0093 0.0017119 0.32088 0.00027338 2.3302 0.0019852 851.966979342814 106.78 0.39043 106.78 106.57 106.96 0 26 7 6 0 0 0 2.2593E-38 2 129050 192.15 185.91 1 109750000 2273 944 2098 2129 2670;2671 2671 APSPAPSSVPLGSEK 15 Unmodified _APSPAPSSVPLGSEK_ 0 0 0 O75179 O75179 O75179 ANKRD17 Ankyrin repeat domain-containing protein 17 MULTI-MSMS 210214_Eclipse_Hela_QC 712.876831054688 2 712.375006 1422.73546 0.071379 5.0848E-05 1.701 0.0012118 1.7724 0.0012626 712.877431300308 38.611 0.3933 38.611 38.392 38.785 0 14 7 3 0 0 0 0.036724 1 33808 33.057 12.187 1 3068900 2274 430 2099 2130 2672 2672 APSTPLLTVR 10 Unmodified _APSTPLLTVR_ 0 0 0 Q9BY44 Q9BY44 Q9BY44 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 527.816040039062 2 527.816399 1053.61824 0.63426 0.00033477 -0.19202 -0.00010135 0.44224 0.00023342 527.816311885712 50.041 0.74424 50.041 49.635 50.38 0 33 14 3 0 0 0 0.0068304 1 49735 53.317 31.789 1 11365000 2275 3353 2100 2131 2673 2673 APSVANVGSHCDLSLK 16 Unmodified _APSVANVGSHCDLSLK_ 0 0 0 P21333 P21333 P21333 FLNA Filamin-A MULTI-MSMS 210214_Eclipse_Hela_QC 552.278991699219 3 552.278761 1653.81445 0.42312 0.00023368 0.15915 8.7894E-05 0.58227 0.00032158 552.278969842077 42.691 1.0957 42.691 42.348 43.444 0 73 21 6 0 0 0 4.341E-08 1 39259 88.951 76.666 1 145170000 2276 995 2101 2132 2674 2674 APSVANVGSHCDLSLK 16 Unmodified _APSVANVGSHCDLSLK_ 0 0 0 P21333 P21333 P21333 FLNA Filamin-A MULTI-MSMS 210214_Eclipse_Hela_QC 828.416564941406 2 827.914504 1653.81445 1.0042 0.00083137 0.091044 7.5377E-05 1.0952 0.00090674 827.914625028505 42.669 0.39825 42.669 42.448 42.846 0 21 7 4 0 0 0 1.8994E-07 1 39443 109.84 100.66 1 6361800 2277 995 2101 2132 2675 2675 APSVATVGSICDLNLK 16 Unmodified _APSVATVGSICDLNLK_ 0 0 0 O75369 O75369 O75369 FLNB Filamin-B MULTI-MSMS 210214_Eclipse_Hela_QC 823.438232421875 2 822.934905 1643.85526 0.92493 0.00076116 -0.37704 -0.00031028 0.54789 0.00045088 822.934756565665 76.943 1.2942 76.943 76.527 77.821 0 84 25 6 0 0 0 1.4832E-07 1 87374 133.05 119.14 1 95787000 2278 445 2102 2133 2676 2676 APSVPAAEPEYPK 13 Unmodified _APSVPAAEPEYPK_ 0 0 0 P54819 P54819 P54819 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 678.346069335938 2 678.345717 1354.67688 0.78241 0.00053075 0.060694 4.1171E-05 0.84311 0.00057192 678.345750523005 42.664 0.79671 42.664 42.298 43.095 0 49 15 5 0 0 0 8.7978E-05 1 39215 91.855 64.112 1 60336000 2279 1521 2103 2134 2677 2677 APSYIEIFGR 10 Unmodified _APSYIEIFGR_ 0 0 0 Q5T4S7 Q5T4S7 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 MULTI-MSMS 210214_Eclipse_Hela_QC 576.806945800781 2 576.806031 1151.59751 1.2075 0.0006965 1.1061 0.00063799 2.3136 0.0013345 576.806654543128 77.319 0.59674 77.319 77.025 77.622 0 23 11 3 0 0 0 0.015825 1 88189 48.423 32.221 1 4677500 2280 2358 2104 2135 2678 2678 APSYLEISSMR 11 Unmodified _APSYLEISSMR_ 0 0 0 P78347 P78347 P78347 GTF2I General transcription factor II-I MULTI-MSMS 210214_Eclipse_Hela_QC 627.814270019531 2 627.313363 1252.61217 -0.3577 -0.00022439 0.4143 0.0002599 0.0566 3.5506E-05 627.313608852421 62.168 0.7879 62.168 61.641 62.429 0 37 15 3 0 0 0 2.3623E-06 1 66848 117.3 87.49 1 18409000 2281 1746 2105 2136 2679 2679 APTCSLDGALPLGAQIPAVHR 21 Unmodified _APTCSLDGALPLGAQIPAVHR_ 0 0 0 Q9Y613 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 716.049743652344 3 715.380879 2143.12081 1.4395 0.0010298 0.20598 0.00014736 1.6454 0.0011771 716.04905362857 79.339 0.54727 79.339 79.015 79.562 0 29 10 5 0 0 0 0.011786 2 90924 31.753 27.136 1 5044300 2282 4132 2106 2137 2680;2681 2680 APTIETVVLYTGETPSEQDQGK 22 Unmodified _APTIETVVLYTGETPSEQDQGK_ 0 0 0 Q9BYC8 Q9BYC8 Q9BYC8 MRPL32 39S ribosomal protein L32, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1182.58898925781 2 1182.08428 2362.154 2.2185 0.0026224 -0.24832 -0.00029353 1.9701 0.0023289 1182.08377675386 83.585 0.59692 83.585 83.256 83.853 0 35 11 4 0 0 0 4.1683E-05 1 96674 66.797 62.481 1 9509400 2283 3355 2107 2138 2682 2682 APVAGTCYQAEWDDYVPK 18 Unmodified _APVAGTCYQAEWDDYVPK_ 0 0 0 P30086 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide MULTI-MSMS 210214_Eclipse_Hela_QC 1035.46691894531 2 1035.4673 2068.92004 0.4115 0.00042609 -0.43838 -0.00045393 -0.026882 -2.7835E-05 1035.96844465364 80.235 1.5905 80.235 79.761 81.352 0 115 31 7 0 0 0 8.3639E-05 2 91876 75.479 70.4 1 240270000 2284 1119 2108 2139 2683;2684 2683 APVDFGYVGIDSILEQMR 18 Unmodified _APVDFGYVGIDSILEQMR_ 0 0 0 Q9UHD8 Q9UHD8 Q9UHD8 SEPT9 Septin-9 MULTI-MSMS 210214_Eclipse_Hela_QC 1005.50372314453 2 1005.50368 2008.99281 0.9449 0.0009501 -0.85061 -0.0008553 0.094288 9.4807E-05 1006.00438487904 108.83 0.24863 108.83 108.7 108.95 0 18 4 5 0 0 0 6.2881E-35 1 131805 223.36 207.6 1 39525000 2285 3863 2109 2140 2685 2685 APVEGIGQPEK 11 Unmodified _APVEGIGQPEK_ 0 0 0 Q8WW59 Q8WW59 Q8WW59 SPRYD4 SPRY domain-containing protein 4 MULTI-MSMS 210214_Eclipse_Hela_QC 562.801391601562 2 562.800946 1123.58734 0.03317 1.8668E-05 -0.29962 -0.00016862 -0.26645 -0.00014996 562.800798538558 26.11 0.44834 26.11 25.91 26.358 0 20 8 3 0 0 0 0.00020934 1 15831 91.636 76.874 1 10577000 2286 2847 2110 2141 2686 2686 APVEHVVADAGAFLR 15 Unmodified _APVEHVVADAGAFLR_ 0 0 0 Q9ULX3 Q9ULX3 Q9ULX3 NOB1 RNA-binding protein NOB1 MULTI-MSMS 210214_Eclipse_Hela_QC 517.94775390625 3 517.947452 1550.82053 0.78727 0.00040776 0.15771 8.1688E-05 0.94499 0.00048945 517.947429219912 67.959 0.49679 67.959 67.71 68.207 0 27 9 4 0 0 0 0.032872 1 75287 27.208 18.157 1 4440500 2287 3939 2111 2142 2687 2687 APVGSVVSVPSQSSASSDK 19 Unmodified _APVGSVVSVPSQSSASSDK_ 0 0 0 P52594 P52594 P52594 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 894.953979492188 2 894.952337 1787.89012 0.99882 0.0008939 -0.30239 -0.00027062 0.69644 0.00062328 895.453257564111 42.92 0.79695 42.92 42.597 43.394 0 39 15 4 0 0 0 4.4394E-05 1 39669 99.941 99.941 1 18856000 2288 1474 2112 2143 2688 2688 APVIDIGIANTGK 13 Unmodified _APVIDIGIANTGK_ 0 0 0 Q9Y4P3 Q9Y4P3 Q9Y4P3 TBL2 Transducin beta-like protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 634.864074707031 2 634.864077 1267.7136 0.39345 0.00024979 -0.2086 -0.00013243 0.18485 0.00011736 634.86391635289 66.176 1.6424 66.176 65.403 67.046 0 30 14 3 0 0 0 9.2164E-06 1 72656 101.95 91.431 1 9446300 2289 4091 2113 2144 2689 2689 APVIRPGGTLGLSEAADSDAHLFQDSTEPR 30 Unmodified _APVIRPGGTLGLSEAADSDAHLFQDSTEPR_ 0 0 1 Q9C0C2 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein MULTI-MSMS 210214_Eclipse_Hela_QC 777.892333984375 4 777.640265 3106.53196 1.3819 0.0010746 -0.244 -0.00018974 1.1379 0.00088489 777.89036823757 76.154 0.84632 76.154 75.83 76.676 0 59 16 6 0 0 0 2.0015E-08 1 86671 78.45 76.471 1 13345000 2290 3381 2114 2145 2690 2690 APVLFNK 7 Unmodified _APVLFNK_ 0 0 0 Q13423 Q13423 Q13423 NNT NAD(P) transhydrogenase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 394.736541748047 2 394.736889 787.459225 0.15921 6.2847E-05 -0.57325 -0.00022628 -0.41404 -0.00016344 394.736753661183 32.47 0.7703 32.47 32.211 32.982 0 23 15 3 0 0 0 0.02837 1 24839 56.89 28.252 1 8337200 2291 1982 2115 2146 2691 2691 APVLVALALIEGGMK 15 Unmodified _APVLVALALIEGGMK_ 0 0 0 Q93096 Q93096 Q93096 PTP4A1 Protein tyrosine phosphatase type IVA 1 MULTI-MSMS 210214_Eclipse_Hela_QC 741.443237304688 2 741.441637 1480.86872 0.76908 0.00057023 0.42156 0.00031256 1.1906 0.00088279 741.4429859931 108.78 0.44743 108.78 108.61 109.05 0 16 8 4 0 0 0 1.314E-15 1 131728 135.66 125.98 1 10863000 2292 2938 2116 2147 2692 2692 APVNTAELTDLLIQQNHIGSVIK 23 Unmodified _APVNTAELTDLLIQQNHIGSVIK_ 0 0 0 Q9P287 Q9P287 Q9P287 BCCIP BRCA2 and CDKN1A-interacting protein MULTI-MSMS 210214_Eclipse_Hela_QC 825.793273925781 3 825.458622 2473.35404 1.3773 0.0011369 -0.42172 -0.00034811 0.9556 0.00078881 825.792981744779 102.22 1.342 102.22 101.84 103.19 0 100 26 6 0 0 0 1.1387E-17 1 122410 103.31 100.63 1 40770000 2293 3799 2117 2148 2693 2693 APVPGTPDSLSSGSSR 16 Unmodified _APVPGTPDSLSSGSSR_ 0 0 0 Q9UJZ1 Q9UJZ1 Q9UJZ1 STOML2 Stomatin-like protein 2, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 758.377685546875 2 757.875901 1513.73725 0.36426 0.00027606 0.033534 2.5415E-05 0.39779 0.00030148 757.875926937673 38.516 0.69215 38.516 38.143 38.835 0 44 13 4 0 0 0 0.00013601 1 33270 77.593 71.87 1 34411000 2294 3900 2118 2149 2694 2694 APVPSTCSSTFPEELSPPSHQAK 23 Unmodified _APVPSTCSSTFPEELSPPSHQAK_ 0 0 0 Q14980 Q14980 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 819.060424804688 3 818.72504 2453.15329 1.0406 0.00085199 -0.05879 -4.8133E-05 0.98184 0.00080386 819.059438895108 54.885 0.84577 54.885 54.476 55.322 0 56 16 4 0 0 0 0.017616 1 56497 27.32 23.292 1 16178000 2295 2122 2119 2150 2695 2695 APVPTGEVYFADSFDR 16 Unmodified _APVPTGEVYFADSFDR_ 0 0 0 P27824 P27824 P27824 CANX Calnexin MULTI-MSMS 210214_Eclipse_Hela_QC 886.423889160156 2 885.920309 1769.82606 1.5895 0.0014081 0.017652 1.5638E-05 1.6071 0.0014238 885.920298799061 83.728 1.8409 83.728 83.306 85.147 0 97 36 4 0 0 0 3.5616E-07 3 96716 102.66 92.708 1 352330000 2296 1080 2120 2151 2696;2697;2698 2698 APVQPQQSPAAAPGGTDEK 19 Unmodified _APVQPQQSPAAAPGGTDEK_ 0 0 0 Q13200 Q13200 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 925.461120605469 2 924.957954 1847.90136 1.1313 0.0010464 -0.49235 -0.0004554 0.63893 0.00059098 924.958036438756 25.682 0.64617 25.682 25.462 26.108 0 35 12 5 0 0 0 3.114E-26 1 15204 152.16 138.74 1 32729000 2297 1957 2121 2152 2699 2699 APVTLLDAQSLAQSFFNR 18 Unmodified _APVTLLDAQSLAQSFFNR_ 0 0 0 P49593 P49593 P49593 PPM1F Protein phosphatase 1F MULTI-SECPEP 210214_Eclipse_Hela_QC 989.096069335938 2 989.523264 1977.03198 1.5131 0.0014973 0.98382 0.00097351 2.4969 0.0024708 990.025324163246 108.38 0.19909 108.38 108.26 108.46 0 9 3 4 0 0 0 3.4439E-07 1 131129 106.32 101.04 1 6190500 2298 1381 2122 2153 2700 2700 APWCYTTNSEVR 12 Unmodified _APWCYTTNSEVR_ 0 0 0 CON__P06868 CON__P06868 CON__P06868 MULTI-MSMS 210214_Eclipse_Hela_QC 742.336730957031 2 742.335358 1482.65616 0.91198 0.000677 -0.26778 -0.00019878 0.64421 0.00047822 742.335681655664 46.403 1.1443 46.403 45.981 47.125 0 78 22 7 0 0 0 1.0391E-08 1 44567 132.01 125.98 1 32664000 + 2299 58 2123 2154 2701 2701 APWELLELR 9 Unmodified _APWELLELR_ 0 0 0 P54577 P54577 P54577 YARS Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 564.284973144531 2 563.816399 1125.61824 1.1859 0.00066861 -0.25249 -0.00014236 0.93337 0.00052625 563.81621653346 93.91 1.0414 93.91 93.538 94.579 0 62 20 4 0 0 0 5.094E-06 2 111304 143.01 123.22 1 26851000 2300 1515 2124 2155 2702;2703 2703 APWIEQEGPEYWDR 14 Unmodified _APWIEQEGPEYWDR_ 0 0 0 P01889 P01889 P01889 HLA-B HLA class I histocompatibility antigen, B-7 alpha chain MULTI-MSMS 210214_Eclipse_Hela_QC 888.907165527344 2 888.404826 1774.7951 1.5874 0.0014103 -0.51369 -0.00045636 1.0737 0.00095392 888.906076878304 79.587 1.7413 79.587 78.617 80.358 0 85 34 6 0 0 0 1.7957E-06 2 91063 125.22 115.78 1 46904000 2301 638 2125 2156 2704;2705 2704 APWVEQEGPEYWDR 14 Unmodified _APWVEQEGPEYWDR_ 0 0 0 P10321 P10321 P10321 HLA-C HLA class I histocompatibility antigen, Cw-7 alpha chain MSMS 210214_Eclipse_Hela_QC 881.398986816406 2 881.397001 1760.77945 NaN NaN NaN NaN NaN NaN NaN 73.546 1 73.546 73.046 74.046 0 0 0 0 3.2723E-07 1 82889 116.23 106.28 1 2302 803 2126 2157 2706 2706 AQAAAPASVPAQAPK 15 Unmodified _AQAAAPASVPAQAPK_ 0 0 0 P47914 P47914 P47914 RPL29 60S ribosomal protein L29 MULTI-MSMS 210214_Eclipse_Hela_QC 689.334411621094 2 689.377883 1376.74121 0.58513 0.00040337 -0.32255 -0.00022236 0.26257 0.00018101 689.377746407097 27.876 0.88536 27.876 27.552 28.437 0 90 17 7 0 0 0 2.9854E-56 3 18350 227.14 188.12 1 367560000 2303 1332 2127 2158 2707;2708;2709 2708 AQAALAVNISAAR 13 Unmodified _AQAALAVNISAAR_ 0 0 0 P40227 P40227 P40227 CCT6A T-complex protein 1 subunit zeta MULTI-MSMS 210214_Eclipse_Hela_QC 628.360778808594 2 628.359493 1254.70443 1.0441 0.00065606 0.44133 0.00027732 1.4854 0.00093338 628.359988988171 50.451 1.3189 50.451 50.08 51.399 0 60 26 4 0 0 0 0.00019533 1 50189 79.693 71.65 1 27187000 2304 1239 2128 2159 2710 2710 AQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLR 39 Unmodified _AQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLR_ 0 0 0 P26599 P26599 P26599 PTBP1 Polypyrimidine tract-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1228.30712890625 3 1227.63308 3679.87741 3.0854 0.0037877 0.4852 0.00059565 3.5706 0.0043834 1228.30249782176 109.43 0.64829 109.43 109.25 109.9 0 53 12 7 0 0 0 1.7296E-128 1 132567 242.28 237.32 1 106160000 2305 1062 2129 2160 2711 2711 AQADLAYQLQVAK 13 Unmodified _AQADLAYQLQVAK_ 0 0 0 O75955 O75955 O75955 FLOT1 Flotillin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 709.885192871094 2 709.885541 1417.75653 0.92117 0.00065393 0.51307 0.00036422 1.4342 0.0010181 709.886194830358 58.758 0.8955 58.758 58.507 59.403 0 37 17 4 0 0 0 3.0702E-06 1 62051 112.71 90.718 1 12900000 2306 502 2130 2161 2712 2712 AQAEAQQPTFDALR 14 Unmodified _AQAEAQQPTFDALR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 773.889831542969 2 773.386436 1544.75832 1.4508 0.001122 -0.04491 -3.4733E-05 1.4059 0.0010873 773.88794216568 50.331 0.49803 50.331 50.08 50.578 0 24 9 3 0 0 0 8.944E-07 1 50255 112.13 93.814 1 8518500 2307 2158 2131 2162 2713 2713 AQAEAQQPTFDALRDELR 18 Unmodified _AQAEAQQPTFDALRDELR_ 0 0 1 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 687.011474609375 3 687.01162 2058.01303 0.21057 0.00014467 0.0019128 1.3141E-06 0.21249 0.00014598 687.34580188625 67.289 1.1114 67.289 66.996 68.107 0 61 22 5 0 0 0 7.9868E-12 1 74035 120.29 101.5 1 64262000 2308 2158 2132 2163 2714 2714 AQAELVGTADEATR 14 Unmodified _AQAELVGTADEATR_ 0 0 0 P30049 P30049 P30049 ATP5D ATP synthase subunit delta, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 716.359375 2 716.357345 1430.70014 0.57328 0.00041067 0.39972 0.00028634 0.97299 0.00069701 716.357606589835 35.001 0.82061 35.001 34.621 35.441 0 57 16 5 0 0 0 1.5612E-09 2 28258 153.95 67.048 1 129870000 2309 1115 2133 2164 2715;2716 2715 AQAEQQHNPAANPTMIR 17 Unmodified _AQAEQQHNPAANPTMIR_ 0 0 0 A5YKK6 A5YKK6 A5YKK6 CNOT1 CCR4-NOT transcription complex subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 626.297546386719 3 626.307602 1875.90098 0.3478 0.00021783 -0.016603 -1.0399E-05 0.3312 0.00020743 626.641955603346 25.487 0.19896 25.487 25.412 25.611 0 6 3 2 0 0 0 0.059147 1 14947 15.766 4.4952 1 3946100 2310 16 2134 2165 2717 2717 AQAEVEGLGK 10 Unmodified _AQAEVEGLGK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 501.266204833984 2 501.266739 1000.51892 0.045418 2.2767E-05 -4.1722 -0.0020914 -4.1267 -0.0020686 501.765295393589 24.529 0.7803 24.529 24.135 24.915 0 38 15 4 0 0 0 0.0012286 1 13763 76.679 7.5032 1 113750000 2311 2158 2135 2166 2718 2718 AQAGEGVRPSPMQLELR 17 Unmodified _AQAGEGVRPSPMQLELR_ 0 0 1 O00764 O00764 O00764 PDXK Pyridoxal kinase MULTI-MSMS 210214_Eclipse_Hela_QC 613.656677246094 3 613.656232 1837.94687 1.2567 0.00077119 -0.34168 -0.00020967 0.91503 0.00056152 613.656299738716 51.284 0.92041 51.284 50.827 51.747 0 60 18 6 0 0 0 2.4988E-05 1 51577 94.544 82.052 1 29253000 2312 181 2136 2167 2719 2719 AQALEDLAGFK 11 Unmodified _AQALEDLAGFK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 210214_Eclipse_Hela_QC 581.808837890625 2 581.808771 1161.60299 0.14264 8.2989E-05 -0.40461 -0.00023541 -0.26197 -0.00015242 581.808443100262 66.075 0.64687 66.075 65.751 66.398 0 40 12 4 0 0 0 0.00065226 1 72309 92.838 77.578 1 35267000 2313 1300 2137 2168 2720 2720 AQALEELTGFR 11 Unmodified _AQALEELTGFR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 210214_Eclipse_Hela_QC 617.8251953125 2 617.824952 1233.63535 0.37122 0.00022935 0.011568 7.1473E-06 0.38279 0.0002365 617.824879193253 69.521 0.69718 69.521 69.128 69.825 0 19 13 2 0 0 0 0.00046741 1 77242 81.338 63.518 1 8872000 2314 1300 2138 2169 2721 2721 AQASSIPVGSR 11 Unmodified _AQASSIPVGSR_ 0 0 0 Q99426 Q99426 Q99426 TBCB Tubulin-folding cofactor B MULTI-MSMS 210214_Eclipse_Hela_QC 537.291625976562 2 536.790912 1071.56727 0.75849 0.00040715 -1.2079 -0.00064839 -0.4494 -0.00024123 536.790628238466 23.737 0.54788 23.737 23.451 23.999 0 34 10 5 0 0 0 0.002509 2 12429 61.78 26.335 1 14309000 2315 3155 2139 2170 2722;2723 2723 AQAVLEEDHYGMEDVK 16 Unmodified _AQAVLEEDHYGMEDVK_ 0 0 0 P36776 P36776 P36776 LONP1 Lon protease homolog, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 611.949401855469 3 611.948969 1832.82508 0.76041 0.00046533 -0.27219 -0.00016657 0.48822 0.00029877 611.948969268146 47.103 0.59655 47.103 46.877 47.473 0 39 11 5 0 0 0 0.041981 1 45631 14.852 9.4234 1 37321000 2316 1210 2140 2171 2724 2724 AQAVSEEEEEEEGK 14 Unmodified _AQAVSEEEEEEEGK_ 0 0 0 Q9GZR7 Q9GZR7 Q9GZR7 DDX24 ATP-dependent RNA helicase DDX24 MULTI-MSMS 210214_Eclipse_Hela_QC 782.337646484375 2 782.336472 1562.65839 0.6419 0.00050218 0.71363 0.00055829 1.3555 0.0010605 782.337282038827 20.588 0.4982 20.588 20.214 20.712 0 14 9 3 0 0 0 0.010777 1 8041 41.283 41.283 1 3273600 2317 3392 2141 2172 2725 2725 AQAVTQPVPLANKPVPAQSTFPSK 24 Unmodified _AQAVTQPVPLANKPVPAQSTFPSK_ 0 0 1 P49750 P49750 P49750 YLPM1 YLP motif-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 826.124816894531 3 826.123463 2475.34856 0.89109 0.00073615 0.60959 0.0005036 1.5007 0.0012397 826.459199896862 56.415 0.7475 56.415 55.819 56.567 0 36 14 5 0 0 0 0.02771 1 58767 31.775 28.677 1 9967300 2318 1389 2142 2173 2726 2726 AQCETLSPDGLPEEQPQTTK 20 Unmodified _AQCETLSPDGLPEEQPQTTK_ 0 0 0 Q7Z6Z7 Q7Z6Z7 Q7Z6Z7 HUWE1 E3 ubiquitin-protein ligase HUWE1 MULTI-MSMS 210214_Eclipse_Hela_QC 1115.01843261719 2 1115.02062 2228.02669 1.2318 0.0013735 2.0012 0.0022314 3.2331 0.003605 1115.52421815219 53.261 0.64833 53.261 52.992 53.64 0 43 12 5 0 0 0 2.45E-05 1 54320 71.607 63.696 1 13069000 2319 2557 2143 2174 2727 2727 AQCPIVER 8 Unmodified _AQCPIVER_ 0 0 0 P46782 P46782 P46782 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 486.750274658203 2 486.750201 971.48585 0.33711 0.00016409 -0.505 -0.00024581 -0.1679 -8.1724E-05 486.749986978288 22.371 1.0945 22.371 22.007 23.102 0 68 21 5 0 0 0 5.9232E-05 2 10445 147.34 126.78 1 253350000 2320 1317 2144 2175 2728;2729 2729 AQCYMDTEQYEEAVR 15 Unmodified _AQCYMDTEQYEEAVR_ 0 0 0 Q99615 Q99615 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 MULTI-MSMS 210214_Eclipse_Hela_QC 947.392761230469 2 946.893108 1891.77166 1.4473 0.0013704 -1.3866 -0.001313 0.060692 5.7469E-05 947.393303730974 57.871 0.69686 57.871 57.412 58.109 0 42 13 4 0 0 0 1.6597E-10 1 60848 118.48 102.35 1 12124000 2321 3178 2145 2176 2730 2730 AQDEGLLSDVVPFK 14 Unmodified _AQDEGLLSDVVPFK_ 0 0 0 P55084 P55084 P55084 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase MULTI-MSMS 210214_Eclipse_Hela_QC 759.928771972656 2 759.395938 1516.77732 1.6622 0.0012623 0.072288 5.4895E-05 1.7345 0.0013172 759.39610002164 95.404 0.79196 95.404 95.025 95.816 0 66 15 6 0 0 0 0.00016479 2 113347 102.03 84.593 1 55071000 2322 1533 2146 2177 2731;2732 2732 AQDEIPALSVSR 12 Unmodified _AQDEIPALSVSR_ 0 0 0 P43686 P43686 P43686 PSMC4 26S protease regulatory subunit 6B MULTI-MSMS 210214_Eclipse_Hela_QC 643.341979980469 2 643.340966 1284.66738 1.1786 0.00075825 0.6423 0.00041322 1.8209 0.0011715 643.341114342103 56.934 0.74557 56.934 56.567 57.312 0 35 14 3 0 0 0 0.0056021 1 59429 64.374 26.818 1 10164000 2323 1294 2147 2178 2733 2733 AQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSR 33 Unmodified _AQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSR_ 0 0 1 P43686 P43686 P43686 PSMC4 26S protease regulatory subunit 6B MULTI-MSMS 210214_Eclipse_Hela_QC 1210.60363769531 3 1210.60384 3628.78969 0.34428 0.00041679 0.78657 0.00095223 1.1309 0.001369 1211.27344784939 106.25 0.44809 106.25 106.02 106.47 0 26 8 5 0 0 0 2.7871E-13 1 128290 87.206 82.89 1 95994000 2324 1294 2148 2179 2734 2734 AQDFHWLTR 9 Unmodified _AQDFHWLTR_ 0 0 0 Q9UJ83 Q9UJ83 Q9UJ83 HACL1 2-hydroxyacyl-CoA lyase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 391.864654541016 3 391.86484 1172.57269 0.47377 0.00018565 -0.425 -0.00016654 0.048773 1.9113E-05 391.864750222779 48.855 0.59129 48.855 48.596 49.187 0 19 11 2 0 0 0 0.034722 1 48146 26.673 20.013 1 2158200 2325 3893 2149 2180 2735 2735 AQDGSHPLSLQDLIEK 16 Unmodified _AQDGSHPLSLQDLIEK_ 0 0 0 O94979 O94979 O94979 SEC31A Protein transport protein Sec31A MULTI-MSMS 210214_Eclipse_Hela_QC 584.638610839844 3 584.303852 1749.88973 0.78355 0.00045783 -0.51342 -0.00029999 0.27013 0.00015784 584.303139864471 72.5 1.095 72.5 71.965 73.06 0 69 21 5 0 0 0 0.0001473 1 81419 65.716 54.025 1 26026000 2326 529 2150 2181 2736 2736 AQDIEAGDGTTSVVIIAGSLLDSCTK 26 Unmodified _AQDIEAGDGTTSVVIIAGSLLDSCTK_ 0 0 0 P50991 P50991 P50991 CCT4 T-complex protein 1 subunit delta MULTI-MSMS 210214_Eclipse_Hela_QC 1311.65710449219 2 1311.15236 2620.29018 2.0663 0.0027092 -0.015325 -2.0094E-05 2.051 0.0026891 1311.65396431102 107.83 0.29977 107.83 107.71 108.01 0 23 5 5 0 0 0 9.6725E-11 1 130478 130.77 126.38 1 49236000 2327 1429 2151 2182 2737 2737 AQDIQCGLQSR 11 Unmodified _AQDIQCGLQSR_ 0 0 0 Q8WVJ2 Q8WVJ2 Q8WVJ2 NUDCD2 NudC domain-containing protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 638.811279296875 2 638.309143 1274.60373 0.48549 0.00030989 0.24627 0.00015719 0.73176 0.00046709 638.309392522234 25.964 0.54673 25.964 25.611 26.158 0 16 10 2 0 0 0 2.447E-11 1 15574 147.95 105.99 1 17257000 2328 2838 2152 2183 2738 2738 AQDLPLK 7 Unmodified _AQDLPLK_ 0 0 0 Q9BSJ8 Q9BSJ8 Q9BSJ8 ESYT1 Extended synaptotagmin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 392.731781005859 2 392.731803 783.449054 -0.19629 -7.709E-05 2.4489 0.00096174 2.2526 0.00088465 392.731703443095 27.378 0.83525 27.378 27.105 27.94 0 33 16 3 0 0 0 0.024308 1 17684 60.76 5.9952 1 14682000 2329 3259 2153 2184 2739 2739 AQDLSNLENTVAALK 15 Unmodified _AQDLSNLENTVAALK_ 0 0 0 Q9NQ48 Q9NQ48 Q9NQ48 LZTFL1 Leucine zipper transcription factor-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 794.424560546875 2 793.922852 1585.83115 1.4605 0.0011595 -0.9947 -0.00078971 0.46583 0.00036983 794.423595137327 85.122 1.1928 85.122 84.55 85.743 0 50 23 4 0 0 0 0.00014143 1 99069 77.062 63.157 1 6821500 2330 3592 2154 2185 2740 2740 AQDPSEVLTMLTNETGFEISSSDATVK 27 Unmodified _AQDPSEVLTMLTNETGFEISSSDATVK_ 0 0 0 Q12905 Q12905 Q12905 ILF2 Interleukin enhancer-binding factor 2 MULTI-MSMS 210214_Eclipse_Hela_QC 1436.69128417969 2 1435.68423 2869.3539 2.5571 0.0036711 -0.34763 -0.00049909 2.2094 0.003172 1436.18584102064 108.43 0.59653 108.43 108.26 108.85 0 43 11 7 0 0 0 4.7936E-49 1 131238 228.76 222.73 1 124040000 2331 1921 2155 2186 2741 2741 AQDPSEVLTMLTNETGFEISSSDATVK 27 Unmodified _AQDPSEVLTMLTNETGFEISSSDATVK_ 0 0 0 Q12905 Q12905 Q12905 ILF2 Interleukin enhancer-binding factor 2 MULTI-MSMS 210214_Eclipse_Hela_QC 957.794677734375 3 957.458576 2869.3539 1.5362 0.0014708 0.39735 0.00038045 1.9335 0.0018513 957.793203736414 108.43 0.39804 108.43 108.16 108.56 0 28 7 7 0 0 0 1.5265E-05 1 131266 64.701 62.228 1 17978000 2332 1921 2155 2186 2742 2742 AQDSSLHMPER 11 Unmodified _AQDSSLHMPER_ 0 0 0 Q9BQG0 Q9BQG0 Q9BQG0 MYBBP1A Myb-binding protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 635.795043945312 2 635.795869 1269.57718 0.19626 0.00012478 1.9019 0.0012092 2.0981 0.001334 635.795289937281 23.989 0.56898 23.989 23.75 24.319 0 26 11 3 0 0 0 0.00048862 1 13027 80.763 63.667 1 10431000 2333 3227 2156 2187 2743 2743 AQDTQPSDATSAPGAEGLEPPAAR 24 Unmodified _AQDTQPSDATSAPGAEGLEPPAAR_ 0 0 0 Q8N884 Q8N884 Q8N884 MB21D1 Cyclic GMP-AMP synthase MULTI-MSMS 210214_Eclipse_Hela_QC 1169.55261230469 2 1169.0513 2336.08805 0.70008 0.00081842 -0.40976 -0.00047903 0.29031 0.00033939 1169.55200592727 51.968 0.6972 51.968 51.548 52.245 0 27 13 3 0 0 0 0.022139 1 52529 31.389 26.588 1 2017900 2334 2709 2157 2188 2744 2744 AQDVDATNPNYEIMCMIR 18 Unmodified _AQDVDATNPNYEIMCMIR_ 0 0 0 O00139 O00139 O00139 KIF2A Kinesin-like protein KIF2A MULTI-MSMS 210214_Eclipse_Hela_QC 1071.48254394531 2 1070.97665 2139.93875 0.78798 0.00084391 0.20664 0.00022131 0.99462 0.0010652 1071.47857835805 91.289 0.44748 91.289 91.002 91.449 0 24 8 4 0 0 0 0.00036134 1 107484 75.479 72.528 1 3465800 2335 126 2158 2189 2745 2745 AQDVLVQEMEVVK 13 Unmodified _AQDVLVQEMEVVK_ 0 0 0 Q99459 Q99459 Q99459 CDC5L Cell division cycle 5-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 744.392944335938 2 744.392341 1486.77013 0.63919 0.00047581 -0.42985 -0.00031998 0.20933 0.00015583 744.392267484187 75.035 0.54904 75.035 74.803 75.353 0 31 10 4 0 0 0 0.013867 1 85097 41.48 16.094 1 14836000 2336 3159 2159 2190 2746 2746 AQEAPGQAEPPAAAEVQGAGNENEPR 26 Unmodified _AQEAPGQAEPPAAAEVQGAGNENEPR_ 0 0 0 O14745 O14745 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 MULTI-MSMS 210214_Eclipse_Hela_QC 1295.10632324219 2 1294.60222 2587.18989 1.6863 0.002183 -0.17439 -0.00022576 1.5119 0.0019573 1295.10338700712 44.765 0.79568 44.765 44.24 45.036 0 48 15 5 0 0 0 3.214E-14 1 42271 130.39 130.39 1 17835000 2337 206 2160 2191 2747 2747 AQEAPGQAEPPAAAEVQGAGNENEPR 26 Unmodified _AQEAPGQAEPPAAAEVQGAGNENEPR_ 0 0 0 O14745 O14745 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 MULTI-MSMS 210214_Eclipse_Hela_QC 863.739990234375 3 863.403905 2587.18989 0.9224 0.0007964 0.41899 0.00036176 1.3414 0.0011582 863.403865465124 44.737 0.54732 44.737 44.438 44.986 0 27 10 4 0 0 0 0.00019527 1 42465 49.618 42.342 1 7170300 2338 206 2160 2191 2748 2748 AQEGGGSEVFQELK 14 Unmodified _AQEGGGSEVFQELK_ 0 0 0 Q8NCA5 Q8NCA5 Q8NCA5 FAM98A Protein FAM98A MULTI-MSMS 210214_Eclipse_Hela_QC 740.360168457031 2 739.85972 1477.70489 1.1186 0.00082758 -0.42976 -0.00031796 0.68881 0.00050962 739.859681429537 52.718 0.54786 52.718 52.344 52.892 0 18 10 2 0 0 0 1.4439E-09 1 53560 127.87 117.64 1 17667000 2339 2741 2161 2192 2749 2749 AQEIAMQNR 9 Unmodified _AQEIAMQNR_ 0 0 0 Q9HCC0 Q9HCC0 Q9HCC0 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 530.764526367188 2 530.76384 1059.51313 0.23917 0.00012694 0.85692 0.00045482 1.0961 0.00058176 530.764482487096 21.302 0.74769 21.302 20.961 21.709 0 24 11 4 0 0 0 0.0046964 1 9091 66.073 47.342 1 6596800 2340 3556 2162 2193 2750 2750 AQEIDGQALLLLK 13 Unmodified _AQEIDGQALLLLK_ 0 0 0 Q8IXK0;Q8NDX5 Q8IXK0;Q8NDX5 Q8NDX5 PHC2;PHC3 Polyhomeotic-like protein 2;Polyhomeotic-like protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 706.411926269531 2 706.411391 1410.80823 1.2136 0.00085731 0.36916 0.00026078 1.5828 0.0011181 706.411530457472 87.06 0.54651 87.06 86.737 87.284 0 27 10 3 0 0 0 0.00010163 1 101488 90.108 82.183 1 8897400 2341 2751;2638 2163 2194 2751 2751 AQEILSQLPIK 11 Unmodified _AQEILSQLPIK_ 0 0 0 P35754 P35754 P35754 GLRX Glutaredoxin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 620.369384765625 2 620.368995 1238.72344 0.87305 0.00054161 0.033433 2.0741E-05 0.90648 0.00056235 620.368956369428 72.239 0.79557 72.239 71.767 72.562 0 46 15 4 0 0 0 0.00064735 1 80695 76.465 62.695 1 21925000 2342 1198 2164 2195 2752 2752 AQEIQDESAVLWLDEIQGGIWQSNK 25 Unmodified _AQEIQDESAVLWLDEIQGGIWQSNK_ 0 0 0 P46940 P46940 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 MULTI-MSMS 210214_Eclipse_Hela_QC 1429.71081542969 2 1429.20378 2856.393 1.9752 0.002823 -0.034058 -4.8676E-05 1.9412 0.0027743 1429.70537110939 108.73 0.29823 108.73 108.61 108.9 0 20 5 5 0 0 0 1.3773E-68 1 131718 204.07 198.34 1 22226000 2343 1322 2165 2196 2753 2753 AQELDALDNSHPIEVSVGHPSEVDEIFDAISYSK 34 Unmodified _AQELDALDNSHPIEVSVGHPSEVDEIFDAISYSK_ 0 0 0 P55786;A6NEC2 P55786 P55786 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 929.202026367188 4 928.696971 3710.75878 1.8058 0.001677 -0.22829 -0.00021201 1.5775 0.001465 929.198331445836 105 0.69826 105 104.83 105.53 0 43 13 7 0 0 0 5.6619E-28 1 126505 118.33 112.08 1 83073000 2344 1544 2166 2197 2754 2754 AQELGHSQSALASAQR 16 Unmodified _AQELGHSQSALASAQR_ 0 0 0 Q14980 Q14980 Q14980 NUMA1 Nuclear mitotic apparatus protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 827.922058105469 2 827.418799 1652.82305 0.83646 0.0006921 -0.02766 -2.2887E-05 0.8088 0.00066921 827.92031675978 22.724 0.24917 22.724 22.553 22.803 0 15 4 4 0 0 0 0.00013302 1 11005 77.894 53.551 1 9748400 2345 2122 2167 2198 2755 2755 AQELSALLGCEVDADQVILSHSPMK 25 Unmodified _AQELSALLGCEVDADQVILSHSPMK_ 0 0 0 Q9BXW7 Q9BXW7 Q9BXW7 CECR5 Cat eye syndrome critical region protein 5 MULTI-MSMS 210214_Eclipse_Hela_QC 904.787902832031 3 904.45081 2710.3306 1.5504 0.0014023 0.3188 0.00028834 1.8692 0.0016906 904.78570408721 104.07 0.64639 104.07 103.73 104.38 0 40 12 4 0 0 0 0.018478 1 125147 25.359 21.827 1 11263000 2346 3347 2168 2199 2756 2756 AQENYEGSEEVSPPQTK 17 Unmodified _AQENYEGSEEVSPPQTK_ 0 0 0 Q93008 Q93008 Q93008 USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-X MULTI-MSMS 210214_Eclipse_Hela_QC 947.429992675781 2 946.929059 1891.84357 0.78692 0.00074516 -0.41524 -0.0003932 0.37168 0.00035196 947.429954145942 32.656 0.67049 32.656 32.361 33.032 0 33 13 3 0 0 0 0.0031108 1 25081 46.592 40.986 1 5113500 2347 2932 2169 2200 2757 2757 AQEPESGLSEETQVK 15 Unmodified _AQEPESGLSEETQVK_ 0 0 0 P78527 P78527 P78527 PRKDC DNA-dependent protein kinase catalytic subunit MULTI-MSMS 210214_Eclipse_Hela_QC 816.392272949219 2 816.391581 1630.76861 0.84947 0.0006935 0.18087 0.00014766 1.0303 0.00084116 816.391437069137 34.124 1.1836 34.124 33.477 34.661 0 88 24 5 0 0 0 1.0363E-15 2 27620 138.75 127.66 1 73163000 2348 1752 2170 2201 2758;2759 2759 AQEPLVDGCSGGGR 14 Unmodified _AQEPLVDGCSGGGR_ 0 0 0 Q7Z2K6 Q7Z2K6 Q7Z2K6 ERMP1 Endoplasmic reticulum metallopeptidase 1 MSMS 210214_Eclipse_Hela_QC 701.82275390625 2 701.822615 1401.63068 NaN NaN NaN NaN NaN NaN NaN 26.15 1 26.15 25.65 26.65 0 0 0 0 0.011652 1 15904 53.252 34.94 1 2349 2531 2171 2202 2760 2760 AQEQQQQMAELHSK 14 Unmodified _AQEQQQQMAELHSK_ 0 0 0 Q9P2E9 Q9P2E9 Q9P2E9 RRBP1 Ribosome-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 552.933166503906 3 552.598382 1654.77332 0.13057 7.2151E-05 1.2129 0.00067027 1.3435 0.00074242 552.598579798096 20.131 0.6464 20.131 19.718 20.364 0 23 12 3 0 0 0 0.001501 1 7395 37.657 24.253 1 5825900 2350 3802 2172 2203 2761 2761 AQESVGIYEVTHQFVK 16 Unmodified _AQESVGIYEVTHQFVK_ 0 0 0 Q9NWV4 Q9NWV4 Q9NWV4 C1orf123 UPF0587 protein C1orf123 MULTI-MSMS 210214_Eclipse_Hela_QC 612.317077636719 3 612.315981 1833.92611 0.44461 0.00027224 -0.73901 -0.00045251 -0.2944 -0.00018027 612.315121317618 69.501 0.84603 69.501 69.128 69.974 0 56 16 5 0 0 0 0.00022679 1 77110 66.246 58.655 1 21788000 2351 3708 2173 2204 2762 2762 AQETEAAPSQAPADEPEPESAAAQSQENQDTRPK 34 Unmodified _AQETEAAPSQAPADEPEPESAAAQSQENQDTRPK_ 0 0 1 Q9UNF1 Q9UNF1 Q9UNF1 MAGED2 Melanoma-associated antigen D2 MULTI-MSMS 210214_Eclipse_Hela_QC 1193.87646484375 3 1193.54197 3577.60407 0.8655 0.001033 0.1475 0.00017604 1.013 0.0012091 1193.87604636678 36.288 0.54613 36.288 36.074 36.621 0 32 10 4 0 0 0 0.038067 1 30438 22.197 20.724 1 8802400 2352 3954 2174 2205 2763 2763 AQETGHLVMDVR 12 Unmodified _AQETGHLVMDVR_ 0 0 0 Q8WWI1 Q8WWI1 Q8WWI1 LMO7 LIM domain only protein 7 MULTI-MSMS 210214_Eclipse_Hela_QC 678.843017578125 2 678.340443 1354.66633 0.81348 0.00055181 0.39358 0.00026698 1.2071 0.00081879 678.340539541607 31.803 0.44695 31.803 31.52 31.967 0 14 8 2 0 0 0 0.022463 1 24103 46.73 5.2814 1 4213900 2353 2850 2175 2206 2764 2764 AQETMDSLAMVEGVSSCQDLYR 22 Unmodified _AQETMDSLAMVEGVSSCQDLYR_ 0 0 0 Q86Y56 Q86Y56 Q86Y56 DNAAF5 Dynein assembly factor 5, axonemal MULTI-MSMS 210214_Eclipse_Hela_QC 1246.05590820312 2 1245.55091 2489.08726 2.4658 0.0030713 0.53525 0.00066668 3.001 0.003738 1246.0534876367 93.008 0.49747 93.008 92.743 93.24 0 24 9 4 0 0 0 0.0010102 1 109953 46.746 41.667 1 2919500 2354 2606 2176 2207 2765 2765 AQEVAELK 8 Unmodified _AQEVAELK_ 0 0 0 Q8IY81 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 210214_Eclipse_Hela_QC 444.245544433594 2 444.245275 886.475997 0.14623 6.496E-05 2.7297 0.0012127 2.876 0.0012776 444.245495701641 22.847 0.64773 22.847 22.653 23.301 0 26 12 3 0 0 0 0.0071785 1 11182 73.26 40.79 1 18194000 2355 2645 2177 2208 2766 2766 AQEVSEYLSQNPR 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AQEVSEYLSQNPR_ 1 0 0 Q9NXV6 Q9NXV6 Q9NXV6 CDKN2AIP CDKN2A-interacting protein MULTI-MSMS 210214_Eclipse_Hela_QC 781.875427246094 2 781.875901 1561.73725 0.93785 0.00073328 0.41453 0.00032411 1.3524 0.0010574 781.875548203364 88.321 0.63564 88.321 88.03 88.665 0 18 12 2 0 0 0 6.4038E-05 1 103407 85.813 67.501 1 5785600 2356 3731 2178 2209 2767 2767 AQEYDSSFPNWEFAR 15 Unmodified _AQEYDSSFPNWEFAR_ 0 0 0 Q99661 Q99661 Q99661 KIF2C Kinesin-like protein KIF2C MULTI-MSMS 210214_Eclipse_Hela_QC 923.906921386719 2 923.90519 1845.79583 1.2099 0.0011178 1.8522 0.0017113 3.0621 0.0028291 924.410284344107 83.866 0.69749 83.866 83.603 84.301 0 28 13 3 0 0 0 1.9481E-05 2 97103 97.214 87.261 1 3778500 2357 3184 2179 2210 2768;2769 2768 AQFAEATQR 9 Unmodified _AQFAEATQR_ 0 0 0 O94874 O94874 O94874 UFL1 E3 UFM1-protein ligase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 511.256225585938 2 511.256705 1020.49886 0.12181 6.2275E-05 -0.11641 -5.9515E-05 0.0053996 2.7606E-06 511.256477408547 20.887 0.59717 20.887 20.514 21.111 0 20 11 2 0 0 0 0.034707 1 8402 42.075 20.328 1 7933300 2358 520 2180 2211 2770 2770 AQFAQPEILIGTIPGAGGTQR 21 Unmodified _AQFAQPEILIGTIPGAGGTQR_ 0 0 0 P30084 P30084 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1062.8232421875 2 1063.07365 2124.13275 1.2618 0.0013414 0.35623 0.00037869 1.6181 0.0017201 1063.57540263659 94.701 0.98889 94.701 94.284 95.273 0 82 19 6 0 0 0 1.9928E-28 3 112519 157.2 143.61 1 90495000 2359 1117 2181 2212 2771;2772;2773 2772 AQFAQPEILIGTIPGAGGTQR 21 Unmodified _AQFAQPEILIGTIPGAGGTQR_ 0 0 0 P30084 P30084 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 709.388366699219 3 709.051527 2124.13275 1.2487 0.0008854 0.64042 0.00045409 1.8891 0.0013395 709.386722399619 94.683 0.74046 94.683 94.483 95.223 0 31 14 4 0 0 0 0.05394 1 112154 11.46 7.3534 1 2517300 2360 1117 2181 2212 2774 2774 AQFEGIVTDLIR 12 Unmodified _AQFEGIVTDLIR_ 0 0 0 P38646 P38646 P38646 HSPA9 Stress-70 protein, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 681.375427246094 2 681.374809 1360.73507 1.3007 0.00088628 -0.0017767 -1.2106E-06 1.2989 0.00088507 681.374887423734 95 1.4857 95 94.284 95.77 0 107 29 6 0 0 0 7.9458E-18 2 112757 173.24 136.68 1 184230000 2361 1228 2182 2213 2775;2776 2775 AQFEQLK 7 Unmodified _AQFEQLK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 432.736083984375 2 432.23471 862.454868 0.010049 4.3437E-06 -0.93489 -0.00040409 -0.92484 -0.00039975 432.235284606705 25.918 0.94553 25.918 25.661 26.607 0 39 18 4 0 0 0 0.0053838 1 15610 100.07 33.032 1 27387000 2362 2158 2183 2214 2777 2777 AQFFVEDASTASALK 15 Unmodified _AQFFVEDASTASALK_ 0 0 0 Q9UBU9 Q9UBU9 Q9UBU9 NXF1 Nuclear RNA export factor 1 MSMS 210214_Eclipse_Hela_QC 792.899658203125 2 792.898845 1583.78314 NaN NaN NaN NaN NaN NaN NaN 70.363 1 70.363 69.863 70.863 0 0 0 0 6.2252E-08 1 78446 106.49 91.52 1 2363 3832 2184 2215 2778 2778 AQFILQGDACVK 12 Unmodified _AQFILQGDACVK_ 0 0 0 CON__Q2UVX4 CON__Q2UVX4 CON__Q2UVX4 MULTI-MSMS 210214_Eclipse_Hela_QC 675.348449707031 2 675.347737 1348.68092 1.6413 0.0011085 0.15776 0.00010654 1.7991 0.001215 675.347821535229 55.468 1.3444 55.468 54.874 56.218 0 80 26 6 0 0 0 0.0035412 1 58192 52.79 39.753 1 30413000 + 2364 92 2185 2216 2779 2779 AQFLVEK 7 Unmodified _AQFLVEK_ 0 0 0 Q99623 Q99623 Q99623 PHB2 Prohibitin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 417.739562988281 2 417.739628 833.464704 0.15242 6.3674E-05 -0.37523 -0.00015675 -0.22281 -9.3077E-05 417.739494317659 31.446 0.79543 31.446 31.122 31.917 0 38 15 3 0 0 0 0.0021922 1 23489 116.54 49.549 1 68476000 2365 3180 2186 2217 2780 2780 AQFVPLPVSVSVEFAVAATDCIAK 24 Unmodified _AQFVPLPVSVSVEFAVAATDCIAK_ 0 0 0 CON__P12763 CON__P12763 CON__P12763 MULTI-MSMS 210214_Eclipse_Hela_QC 1260.66796875 2 1260.16435 2518.31415 2.5991 0.0032753 0.19959 0.00025151 2.7987 0.0035269 1260.66626959053 110.36 1.146 110.36 110.1 111.25 0 69 22 6 0 0 0 1.5935E-24 1 133850 145.1 140.63 1 44687000 + 2366 62 2187 2218 2781 2781 AQFVTCGQDK 10 Unmodified _AQFVTCGQDK_ 0 0 0 O95834 O95834 O95834 EML2 Echinoderm microtubule-associated protein-like 2 MULTI-MSMS 210214_Eclipse_Hela_QC 577.269653320312 2 577.268955 1152.52336 0.57129 0.00032979 1.145 0.00066097 1.7163 0.00099075 577.269515599594 22.554 0.54798 22.554 22.404 22.952 0 23 10 4 0 0 0 0.0053123 1 10776 66.621 61.312 1 5727600 2367 603 2188 2219 2782 2782 AQGETEVLK 9 Unmodified _AQGETEVLK_ 0 0 0 O95478 O95478 O95478 NSA2 Ribosome biogenesis protein NSA2 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 487.761474609375 2 487.761289 973.508025 0.25434 0.00012406 -0.7666 -0.00037392 -0.51227 -0.00024986 487.76133862237 22.076 0.49645 22.076 21.759 22.255 0 17 9 3 0 0 0 0.011198 1 10098 52.786 22.979 1 11769000 2368 575 2189 2220 2783 2783 AQGPAASAEEPKPVEAPAANSDQTVTVK 28 Unmodified _AQGPAASAEEPKPVEAPAANSDQTVTVK_ 0 0 1 P80723 P80723 P80723 BASP1 Brain acid soluble protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 922.13330078125 3 921.798032 2762.37227 0.84635 0.00078017 -0.61115 -0.00056335 0.23521 0.00021681 922.131619489551 42.373 1.3918 42.373 42.002 43.394 0 127 27 9 0 0 0 7.9631E-18 2 38768 117.03 110.08 1 587830000 2369 1759 2190 2221 2784;2785 2785 AQGPAASAEEPKPVEAPAANSDQTVTVKE 29 Unmodified _AQGPAASAEEPKPVEAPAANSDQTVTVKE_ 0 0 2 P80723 P80723 P80723 BASP1 Brain acid soluble protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 965.482849121094 3 964.81223 2891.41486 0.82627 0.00079719 -0.1699 -0.00016392 0.65637 0.00063327 965.146307349431 44.763 0.94512 44.763 44.438 45.384 0 83 18 7 0 0 0 3.3952E-07 1 42236 83.022 72.019 1 303390000 2370 1759 2191 2222 2786 2786 AQGPGAFGSHLSLPSPVELEQVR 23 Unmodified _AQGPGAFGSHLSLPSPVELEQVR_ 0 0 0 Q13671 Q13671 Q13671 RIN1 Ras and Rab interactor 1 MULTI-MSMS 210214_Eclipse_Hela_QC 792.749633789062 3 792.748396 2375.22336 0.91834 0.00072802 0.23469 0.00018605 1.153 0.00091407 793.082864338607 88.285 0.4865 88.285 88.08 88.566 0 24 9 3 0 0 0 0.0092082 3 103359 32.391 24.679 1 6033200 2371 2030 2192 2223 2787;2788;2789 2789 AQGPQQQPGSEGPSYAK 17 Unmodified _AQGPQQQPGSEGPSYAK_ 0 0 0 Q3ZCQ8 Q3ZCQ8 Q3ZCQ8 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 MULTI-MSMS 210214_Eclipse_Hela_QC 865.411560058594 2 865.41064 1728.80673 0.86695 0.00075027 0.24027 0.00020794 1.1072 0.00095821 865.410643143994 22.082 0.49647 22.082 21.908 22.404 0 24 9 4 0 0 0 9.2441E-18 1 10100 173.72 163.67 1 22261000 2372 2282 2193 2224 2790 2790 AQGSVAFDYR 10 Unmodified _AQGSVAFDYR_ 0 0 0 O15020 O15020 O15020 SPTBN2 Spectrin beta chain, non-erythrocytic 2 MSMS 210214_Eclipse_Hela_QC 557.271057128906 2 557.269813 1112.52507 NaN NaN NaN NaN NaN NaN NaN 39.058 1 39.058 38.558 39.558 0 0 0 0 0.040122 1 34330 48.423 23.529 1 2373 231 2194 2225 2791 2791 AQGWAPLK 8 Unmodified _AQGWAPLK_ 0 0 0 Q99829 Q99829 Q99829 CPNE1 Copine-1 MULTI-MSMS 210214_Eclipse_Hela_QC 435.744995117188 2 435.745245 869.475937 0.017291 7.5347E-06 0.43601 0.00018999 0.4533 0.00019752 435.745438324052 35.636 1.1298 35.636 34.895 36.025 0 46 22 3 0 0 0 0.03268 1 29189 48.346 33.326 1 19869000 2374 3199 2195 2226 2792 2792 AQGYSGLSVK 10 Unmodified _AQGYSGLSVK_ 0 0 0 CON__Q28194;P07996 CON__Q28194;P07996 CON__Q28194 THBS1 Thrombospondin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 505.269073486328 2 505.269281 1008.52401 0.0031297 1.5813E-06 0.56603 0.000286 0.56916 0.00028758 505.269508689955 28.689 0.50046 28.689 28.487 28.988 0 16 10 2 0 0 0 0.0015067 1 19473 73.233 46.096 1 13592000 + 2375 84;736 2196 2227 2793 2793 AQHEDQVEQYK 11 Unmodified _AQHEDQVEQYK_ 0 0 0 P02545 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 210214_Eclipse_Hela_QC 687.818237304688 2 687.817855 1373.62116 0.57802 0.00039757 0.14445 9.9353E-05 0.72246 0.00049692 687.817837849249 16.219 0.47811 16.219 16.146 16.624 0 48 16 5 0 0 0 1.5453E-10 1 2759 161.51 156.03 1 119590000 2376 640 2197 2228 2794 2794 AQHEDQVEQYKK 12 Unmodified _AQHEDQVEQYKK_ 0 0 1 P02545 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 210214_Eclipse_Hela_QC 501.580383300781 3 501.579317 1501.71612 0.17356 8.7054E-05 0.48002 0.00024077 0.65358 0.00032782 501.579259520777 16.166 0.25655 16.166 16.084 16.34 0 12 5 3 0 0 0 0.00043082 1 2628 67.019 57.176 1 36098000 2377 640 2198 2229 2795 2795 AQHEDQVEQYKK 12 Unmodified _AQHEDQVEQYKK_ 0 0 1 P02545 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MSMS 210214_Eclipse_Hela_QC 751.867126464844 2 751.865337 1501.71612 NaN NaN NaN NaN NaN NaN NaN 16.203 1 16.203 15.703 16.703 0 0 0 0 0.017443 1 2655 60.598 43.966 1 2378 640 2198 2229 2796 2796 AQHLADILSSK 11 Unmodified _AQHLADILSSK_ 0 0 0 Q9UHI6 Q9UHI6 Q9UHI6 DDX20 Probable ATP-dependent RNA helicase DDX20 MULTI-MSMS 210214_Eclipse_Hela_QC 394.887237548828 3 394.887422 1181.64044 0.0002037 8.044E-08 -0.25429 -0.00010042 -0.25409 -0.00010034 394.887322182987 38.118 0.69385 38.118 37.845 38.539 0 29 13 3 0 0 0 0.031266 1 32926 31.348 19.134 1 5706500 2379 3866 2199 2230 2797 2797 AQHPDYSFGELSR 13 Unmodified _AQHPDYSFGELSR_ 0 0 0 Q86U86 Q86U86 Q86U86 PBRM1 Protein polybromo-1 MULTI-MSMS 210214_Eclipse_Hela_QC 503.237884521484 3 502.903912 1505.68991 0.38413 0.00019318 0.061498 3.0928E-05 0.44563 0.00022411 502.903979192778 43.36 0.64687 43.36 43.095 43.742 0 30 12 4 0 0 0 0.057243 1 40359 21.041 16.823 1 4478600 2380 2576 2200 2231 2798 2798 AQHQLGEFK 9 Unmodified _AQHQLGEFK_ 0 0 0 Q8N1F7 Q8N1F7 Q8N1F7 NUP93 Nuclear pore complex protein Nup93 MULTI-MSMS 210214_Eclipse_Hela_QC 529.27490234375 2 529.274898 1056.53524 0.12252 6.4845E-05 2.0111 0.0010644 2.1336 0.0011293 529.274938536877 20.906 0.59768 20.906 20.613 21.21 0 27 11 5 0 0 0 0.00074053 1 8437 90.709 61.333 1 18970000 2381 2669 2201 2232 2799 2799 AQHSENDLEEVGK 13 Unmodified _AQHSENDLEEVGK_ 0 0 0 Q9H583 Q9H583 Q9H583 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 486.229919433594 3 485.895193 1454.66375 0.38822 0.00018863 2.0363 0.00098944 2.4245 0.0011781 485.895214015965 21.435 0.5481 21.435 21.26 21.808 0 14 10 2 0 0 0 0.0038248 1 9128 30.805 24.107 1 6664300 2382 3476 2202 2233 2800 2800 AQHTLPQDPAIVQSSLGSASASPFQPHVPYSPFR 34 Unmodified _AQHTLPQDPAIVQSSLGSASASPFQPHVPYSPFR_ 0 0 0 Q9BX40 Q9BX40 Q9BX40 LSM14B Protein LSM14 homolog B MULTI-MSMS 210214_Eclipse_Hela_QC 905.459716796875 4 905.208846 3616.80628 1.5089 0.0013659 0.37338 0.00033799 1.8823 0.0017039 905.4603034224 89.832 0.74529 89.832 89.561 90.306 0 48 14 5 0 0 0 0.044272 1 105406 12.862 11.137 1 7860400 2383 3337 2203 2234 2801 2801 AQHVFQHAVPQEGK 14 Unmodified _AQHVFQHAVPQEGK_ 0 0 0 Q13867 Q13867 Q13867 BLMH Bleomycin hydrolase MULTI-MSMS 210214_Eclipse_Hela_QC 525.939208984375 3 525.939068 1574.79537 -0.11172 -5.8758E-05 0.4297 0.00022599 0.31798 0.00016724 525.939190672141 21.153 0.24923 21.153 20.961 21.21 0 9 4 3 0 0 0 0.019208 1 8767 27.734 25.074 1 4090500 2384 2037 2204 2235 2802 2802 AQIADLPAGSSGNILVELDEAQK 23 Unmodified _AQIADLPAGSSGNILVELDEAQK_ 0 0 0 O14981 O14981 O14981 BTAF1 TATA-binding protein-associated factor 172 MULTI-MSMS 210214_Eclipse_Hela_QC 1170.61596679688 2 1170.10809 2338.20162 1.8989 0.0022219 0.37845 0.00044283 2.2774 0.0026648 1170.60970618514 100.38 0.4967 100.38 100.05 100.55 0 25 9 4 0 0 0 0.020373 1 120009 32.275 24.905 1 2296200 2385 230 2205 2236 2803 2803 AQIAGYLYGVSPPDNPQVK 19 Unmodified _AQIAGYLYGVSPPDNPQVK_ 0 0 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 210214_Eclipse_Hela_QC 1009.16577148438 2 1009.0231 2016.03164 1.5144 0.0015281 0.040114 4.0476E-05 1.5545 0.0015685 1009.52445692157 77.298 0.79605 77.298 76.925 77.721 0 51 15 4 0 0 0 0.00070264 2 87814 51.774 44.23 1 22887000 2386 2450 2206 2237 2804;2805 2804 AQIAIDIK 8 Unmodified _AQIAIDIK_ 0 0 0 P42285 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 MULTI-MSMS 210214_Eclipse_Hela_QC 436.266448974609 2 436.26601 870.517468 0.60823 0.00026535 -0.41833 -0.0001825 0.1899 8.2848E-05 436.265867762805 46.19 0.59715 46.19 45.931 46.528 0 17 11 2 0 0 0 0.012313 1 44373 63.565 24.773 1 6322800 2387 1270 2207 2238 2806 2806 AQIDPVLLK 9 Unmodified _AQIDPVLLK_ 0 0 0 Q96T23 Q96T23 Q96T23 RSF1 Remodeling and spacing factor 1 MULTI-MSMS 210214_Eclipse_Hela_QC 498.80810546875 2 498.808042 995.601532 0.42041 0.00020971 -0.12266 -6.1183E-05 0.29776 0.00014852 498.807989764025 69.785 0.49751 69.785 69.526 70.024 0 14 9 2 0 0 0 0.0081187 1 77686 57.177 21.822 1 3054700 2388 3146 2208 2239 2807 2807 AQIFANTVDNAR 12 Unmodified _AQIFANTVDNAR_ 0 0 0 P05783 P05783 P05783 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 210214_Eclipse_Hela_QC 660.339233398438 2 660.338758 1318.66296 0.48051 0.0003173 -0.62954 -0.00041571 -0.14903 -9.841E-05 660.338520963818 41.474 1.4882 41.474 40.959 42.448 0 139 29 8 0 0 0 9.226E-14 3 38262 153.97 125.96 1 822730000 2389 692 2209 2240 2808;2809;2810 2809 AQIHALEGGEVK 12 Unmodified _AQIHALEGGEVK_ 0 0 0 P18858 P18858 P18858 LIG1 DNA ligase 1 MSMS 210214_Eclipse_Hela_QC 626.339416503906 2 626.338227 1250.6619 NaN NaN NaN NaN NaN NaN NaN 24.583 1 24.583 24.083 25.083 0 0 0 0 0.016671 1 13671 53.211 23.795 1 2390 960 2210 2241 2811 2811 AQIHDLVLVGGSTR 14 Unmodified _AQIHDLVLVGGSTR_ 0 0 0 P0DMV9;P0DMV8 P0DMV9 P0DMV9 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A MULTI-MSMS 210214_Eclipse_Hela_QC 733.411499023438 2 733.409714 1464.80488 0.9909 0.00072673 0.046918 3.441E-05 1.0378 0.00076114 733.409783290169 49.473 0.59417 49.473 49.237 49.831 0 38 11 4 0 0 0 1.4414E-09 1 49095 146.5 128.64 1 21044000 2391 792 2211 2242 2812 2812 AQIHEQNPSVEVVYYNK 17 Unmodified _AQIHEQNPSVEVVYYNK_ 0 0 0 Q9BWM7 Q9BWM7 Q9BWM7 SFXN3 Sideroflexin-3 MULTI-MSMS 210214_Eclipse_Hela_QC 673.672973632812 3 673.337445 2016.9905 0.83606 0.00056295 0.19374 0.00013046 1.0298 0.0006934 673.67163373168 44.811 0.64738 44.811 44.537 45.185 0 37 12 5 0 0 0 9.0896E-05 2 42434 69.111 59.453 1 34939000 2392 3333 2212 2243 2813;2814 2814 AQILEGLGIGPGEGSEEELHSASQR 25 Unmodified _AQILEGLGIGPGEGSEEELHSASQR_ 0 0 0 CON__Q9N2I2 CON__Q9N2I2 CON__Q9N2I2 MULTI-MSMS 210214_Eclipse_Hela_QC 855.425109863281 3 855.424418 2563.25142 1.3664 0.0011689 -0.48882 -0.00041815 0.87762 0.00075074 855.758728580545 72.787 0.89668 72.787 72.363 73.26 0 48 17 4 0 0 0 5.5671E-05 1 81638 56.72 53.879 1 17317000 + 2393 113 2213 2244 2815 2815 AQILGGANTPYEK 13 Unmodified _AQILGGANTPYEK_ 0 0 0 Q9NPD8 Q9NPD8 Q9NPD8 UBE2T Ubiquitin-conjugating enzyme E2 T MSMS 210214_Eclipse_Hela_QC 681.357666015625 2 681.356616 1360.69868 NaN NaN NaN NaN NaN NaN NaN 40.856 1 40.856 40.356 41.356 0 0 0 0 0.0022416 1 36888 69.979 50.708 1 2394 3584 2214 2245 2816 2816 AQILPIR 7 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AQILPIR_ 1 0 0 Q00610 Q00610 Q00610 CLTC Clathrin heavy chain 1 MULTI-SECPEP 210214_Eclipse_Hela_QC 851.754577636719 1 852.530164 851.522887 0.88255 0.0007524 0.39311 0.00033513 1.2757 0.0010875 852.530435327433 86.414 0.94449 86.414 86.091 87.035 0 52 18 4 0 0 0 0.022906 1 100865 77.748 25.065 1 62710000 2395 1802 2215 2246 2817 2817 AQILVADTWSVLEGK 15 Unmodified _AQILVADTWSVLEGK_ 0 0 0 Q5T6V5 Q5T6V5 Q5T6V5 C9orf64 UPF0553 protein C9orf64 MULTI-MSMS 210214_Eclipse_Hela_QC 815.446899414062 2 815.445963 1628.87737 1.4122 0.0011515 0.4017 0.00032756 1.8139 0.0014791 815.446291878921 98.774 0.59689 98.774 98.511 99.108 0 29 11 4 0 0 0 0.00074788 1 117915 57.019 21.605 1 3383400 2396 2362 2216 2247 2818 2818 AQIWDTAGQER 11 Unmodified _AQIWDTAGQER_ 0 0 0 Q15907;P62491 Q15907 Q15907 RAB11B;RAB11A Ras-related protein Rab-11B;Ras-related protein Rab-11A MULTI-MSMS 210214_Eclipse_Hela_QC 637.809814453125 2 637.809833 1273.60511 0.23959 0.00015281 0.1758 0.00011213 0.41539 0.00026494 637.809968912329 41.063 0.84525 41.063 40.76 41.606 0 52 16 4 0 0 0 1.4801E-14 1 37007 166.07 154.7 1 60232000 2397 2220 2217 2248 2819 2819 AQLADSFHLQQFFR 14 Unmodified _AQLADSFHLQQFFR_ 0 0 0 Q13813 Q13813 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 210214_Eclipse_Hela_QC 570.293273925781 3 569.958239 1706.85289 0.78398 0.00044684 -0.016478 -9.392E-06 0.7675 0.00043744 569.958205173059 87.209 0.74551 87.209 86.886 87.632 0 54 14 5 0 0 0 7.5381E-05 1 101694 60.401 52.224 1 22168000 2398 2034 2218 2249 2820 2820 AQLDEWK 7 Unmodified _AQLDEWK_ 0 0 0 P49756 P49756 P49756 RBM25 RNA-binding protein 25 MULTI-MSMS 210214_Eclipse_Hela_QC 445.224365234375 2 445.224342 888.434132 0.094564 4.2102E-05 -0.39116 -0.00017416 -0.2966 -0.00013205 445.224241607577 32.635 0.81949 32.635 32.411 33.231 0 22 16 2 0 0 0 0.045529 1 25255 49.358 28.499 1 12532000 2399 1391 2219 2250 2821 2821 AQLDQTGQHLFCVCGTR 17 Unmodified _AQLDQTGQHLFCVCGTR_ 0 0 0 Q12788 Q12788 Q12788 TBL3 Transducin beta-like protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 664.647766113281 3 664.312248 1989.91491 0.74322 0.00049373 -0.15075 -0.00010015 0.59246 0.00039358 664.646814003322 54.738 0.59691 54.738 54.426 55.023 0 30 11 4 0 0 0 0.0027189 1 56438 39.244 37.473 1 10535000 2400 1908 2220 2251 2822 2822 AQLDYVDLYLIHSPMSLK 18 Unmodified _AQLDYVDLYLIHSPMSLK_ 0 0 0 P42330 P42330 P42330 AKR1C3 Aldo-keto reductase family 1 member C3 MULTI-MSMS 210214_Eclipse_Hela_QC 703.0390625 3 702.702848 2105.08671 1.4832 0.0010422 -0.45398 -0.00031901 1.0292 0.00072323 703.037199609148 103.26 0.54681 103.26 102.99 103.53 0 28 10 3 0 0 0 0.0014538 1 124121 32.55 29.406 1 3623100 2401 1271 2221 2252 2823 2823 AQLDYVDLYLIHSPMSLKPGEELSPTDENGK 31 Unmodified _AQLDYVDLYLIHSPMSLKPGEELSPTDENGK_ 0 0 1 P42330 P42330 P42330 AKR1C3 Aldo-keto reductase family 1 member C3 MULTI-MSMS 210214_Eclipse_Hela_QC 866.18408203125 4 865.680164 3458.69155 2.1549 0.0018655 0.50356 0.00043592 2.6585 0.0023014 865.931298114413 100.3 1.2432 100.3 99.954 101.2 0 75 24 5 0 0 0 0.053732 1 119789 15.434 13.599 1 22959000 2402 1271 2222 2253 2824 2824 AQLELEVSK 9 Unmodified _AQLELEVSK_ 0 0 0 Q14764 Q14764 Q14764 MVP Major vault protein MULTI-MSMS 210214_Eclipse_Hela_QC 508.784362792969 2 508.784764 1015.55498 0.080755 4.1087E-05 -0.15721 -7.9984E-05 -0.076452 -3.8898E-05 508.784600074573 40.93 0.54705 40.93 40.611 41.158 0 21 10 3 0 0 0 0.034453 1 37014 42.19 16.454 1 5281600 2403 2111 2223 2254 2825 2825 AQLENHEPEEEEEEEMETEEK 21 Unmodified _AQLENHEPEEEEEEEMETEEK_ 0 0 0 Q8N7H5 Q8N7H5 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 864.022766113281 3 863.353665 2587.03917 0.83171 0.00071806 0.37133 0.00032059 1.203 0.0010386 863.688058480864 40.132 0.69623 40.132 39.865 40.562 0 47 13 5 0 0 0 0.00013671 1 35824 53.201 45.84 1 13150000 2404 2707 2224 2255 2826 2826 AQLEPLQQHLQDSQQEISSMQMK 23 Unmodified _AQLEPLQQHLQDSQQEISSMQMK_ 0 0 0 P42566 P42566 P42566 EPS15 Epidermal growth factor receptor substrate 15 MULTI-MSMS 210214_Eclipse_Hela_QC 900.441772460938 3 899.770543 2696.2898 0.99768 0.00089768 0.58072 0.00052252 1.5784 0.0014202 900.439790978162 71.478 0.54817 71.478 71.268 71.816 0 29 10 4 0 0 0 0.057186 1 79994 13.057 10.256 1 4345500 2405 1273 2225 2256 2827 2827 AQLEPVASPAK 11 Unmodified _AQLEPVASPAK_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 555.8115234375 2 555.811313 1109.60807 0.23969 0.00013322 -0.49832 -0.00027697 -0.25863 -0.00014375 555.811190950419 28.015 0.94748 28.015 27.747 28.695 0 49 19 4 0 0 0 0.00010691 1 18476 98.048 74.729 1 33241000 2406 2158 2226 2257 2828 2828 AQLFALTGVQPAR 13 Unmodified _AQLFALTGVQPAR_ 0 0 0 P54578 P54578 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 MULTI-MSMS 210214_Eclipse_Hela_QC 686.393981933594 2 686.390793 1370.76703 1.0119 0.00069455 0.24182 0.00016599 1.2537 0.00086053 686.390961181123 73.686 1.0453 73.686 73.36 74.405 0 56 20 4 0 0 0 2.3495E-19 1 83089 163.38 145.16 1 34348000 2407 1516 2227 2258 2829 2829 AQLGEDIRR 9 Unmodified _AQLGEDIRR_ 0 0 1 Q92734 Q92734 Q92734 TFG Protein TFG MULTI-MSMS 210214_Eclipse_Hela_QC 529.291442871094 2 529.291079 1056.56761 0.15822 8.3746E-05 0.69281 0.0003667 0.85104 0.00045045 529.291376019948 21.335 0.34875 21.335 21.111 21.46 0 12 6 3 0 0 0 0.023874 1 8998 57.281 29.107 1 4054900 2408 2903 2228 2259 2830 2830 AQLGGPEAAK 10 Unmodified _AQLGGPEAAK_ 0 0 0 P04792 P04792 P04792 HSPB1 Heat shock protein beta-1 MULTI-MSMS 210214_Eclipse_Hela_QC 471.777740478516 2 471.256174 940.497795 0.27385 0.00012905 -0.19067 -8.9856E-05 0.083174 3.9196E-05 471.256066777801 19.045 0.54728 19.045 18.821 19.369 0 24 10 3 0 0 0 0.0029958 2 5688 65.465 47.557 1 35615000 2409 669 2229 2260 2831;2832 2832 AQLGLGHSYSR 11 Unmodified _AQLGLGHSYSR_ 0 0 0 O00567 O00567 O00567 NOP56 Nucleolar protein 56 MULTI-MSMS 210214_Eclipse_Hela_QC 397.210174560547 3 396.875516 1187.60472 -0.031999 -1.2699E-05 -0.84768 -0.00033642 -0.87968 -0.00034912 396.875433456709 24.288 0.38368 24.288 24.135 24.518 0 28 7 6 0 0 0 0.00012483 1 13251 70.685 63.666 1 22617000 2410 174 2230 2261 2833 2833 AQLGLGHSYSR 11 Unmodified _AQLGLGHSYSR_ 0 0 0 O00567 O00567 O00567 NOP56 Nucleolar protein 56 MSMS 210214_Eclipse_Hela_QC 594.809814453125 2 594.809636 1187.60472 NaN NaN NaN NaN NaN NaN NaN 24.304 1 24.304 23.804 24.804 0 0 0 0 0.00019801 1 13266 128.27 83.188 1 2411 174 2230 2261 2834 2834 AQLGVQAFADALLIIPK 17 Unmodified _AQLGVQAFADALLIIPK_ 0 0 0 P40227 P40227 P40227 CCT6A T-complex protein 1 subunit zeta MULTI-MSMS 210214_Eclipse_Hela_QC 884.524841308594 2 884.522005 1767.02946 1.4392 0.001273 -0.53758 -0.00047551 0.90159 0.00079748 884.521558598019 109.08 0.59745 109.08 108.95 109.55 0 28 11 5 0 0 0 8.597E-35 1 132155 170.95 157.14 1 62921000 2412 1239 2231 2262 2835 2835 AQLLQPTLEINPR 13 Unmodified _AQLLQPTLEINPR_ 0 0 0 Q12931 Q12931 Q12931 TRAP1 Heat shock protein 75 kDa, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 746.929321289062 2 746.92774 1491.84093 1.3337 0.0009962 0.36755 0.00027453 1.7013 0.0012707 746.928053499284 73.683 0.79874 73.683 73.36 74.158 0 53 15 5 0 0 0 7.1033E-06 1 82870 130.98 91.36 1 80486000 2413 1924 2232 2263 2836 2836 AQLLVVGSPGPVPR 14 Unmodified _AQLLVVGSPGPVPR_ 0 0 0 P32004 P32004 P32004 L1CAM Neural cell adhesion molecule L1 MULTI-MSMS 210214_Eclipse_Hela_QC 695.415344238281 2 695.414269 1388.81398 1.1055 0.00076877 0.15739 0.00010945 1.2629 0.00087822 695.414386205897 67.734 0.69469 67.734 67.363 68.058 0 37 13 4 0 0 0 2.9629E-05 1 74574 114.83 96.522 1 22719000 2414 1155 2233 2264 2837 2837 AQLMADFQAGR 11 Unmodified _AQLMADFQAGR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 604.297485351562 2 604.298047 1206.58154 0.59907 0.00036202 -1.0235 -0.00061847 -0.42438 -0.00025645 604.297998401852 52.021 0.99594 52.021 51.647 52.643 0 36 19 3 0 0 0 0.00064735 1 52570 76.465 61.798 1 19593000 2415 2158 2234 2265 2838 2838 AQLNIGNVLPVGTMPEGTIVCCLEEK 26 Oxidation (M) _AQLNIGNVLPVGTM(Oxidation (M))PEGTIVCCLEEK_ AQLNIGNVLPVGTM(1)PEGTIVCCLEEK AQLNIGNVLPVGTM(65)PEGTIVCCLEEK 0 1 0 P62917 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 210214_Eclipse_Hela_QC 1430.71508789062 2 1429.70847 2857.40239 2.5829 0.0036928 -0.44371 -0.00063438 2.1392 0.0030584 1430.71062470653 105.8 0.24937 105.8 105.67 105.92 0 17 4 5 0 0 0 9.4159E-05 1 127707 65.467 61.296 1 18595000 2416 1697 2235 2266 2839 2839 430 AQLNIGNVLPVGTMPEGTIVCCLEEK 26 Unmodified _AQLNIGNVLPVGTMPEGTIVCCLEEK_ 0 0 0 P62917 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 210214_Eclipse_Hela_QC 948.819519042969 3 948.1431 2841.40747 1.5908 0.0015083 0.67967 0.00064443 2.2705 0.0021527 948.478226301487 106.89 0.49377 106.89 106.67 107.16 0 36 9 5 0 0 0 1.321E-14 1 129088 106.45 103.8 1 80114000 2417 1697 2235 2267 2840 2840 AQLNIGNVLPVGTMPEGTIVCCLEEK 26 Unmodified _AQLNIGNVLPVGTMPEGTIVCCLEEK_ 0 0 0 P62917 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 210214_Eclipse_Hela_QC 1422.71728515625 2 1421.71101 2841.40747 2.7192 0.0038659 -0.30753 -0.00043722 2.4116 0.0034287 1422.2127337014 106.92 0.49755 106.92 106.76 107.26 0 40 9 8 0 0 0 6.3731E-27 1 129137 205.95 201.91 1 201000000 2418 1697 2235 2267 2841 2841 AQLNIGNVLPVGTMPEGTIVCCLEEKPGDR 30 Unmodified _AQLNIGNVLPVGTMPEGTIVCCLEEKPGDR_ 0 0 1 P62917 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 210214_Eclipse_Hela_QC 1090.21203613281 3 1089.87719 3266.60975 1.1882 0.001295 -1.4006 -0.0015265 -0.21242 -0.00023151 1090.87864903813 105.25 0.49849 105.25 105.03 105.53 0 27 9 5 0 0 0 4.4169E-39 1 126870 151.95 146.17 1 95991000 2419 1697 2236 2268 2842 2842 AQLQQVEAALSGNGENEDLLK 21 Unmodified _AQLQQVEAALSGNGENEDLLK_ 0 0 0 O75940 O75940 O75940 SMNDC1 Survival of motor neuron-related-splicing factor 30 MULTI-MSMS 210214_Eclipse_Hela_QC 1114.56530761719 2 1114.06368 2226.1128 0.77823 0.000867 -0.095988 -0.00010694 0.68224 0.00076006 1114.5649258151 88.702 0.49581 88.702 88.418 88.914 0 23 9 3 0 0 0 0.00013779 1 103898 61.212 53.488 1 8238000 2420 500 2237 2269 2843 2843 AQLSDYSDIVTTLDLAPPTK 20 Unmodified _AQLSDYSDIVTTLDLAPPTK_ 0 0 0 O60216 O60216 O60216 RAD21 Double-strand-break repair protein rad21 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 1075.05895996094 2 1074.55717 2147.09978 0.28522 0.00030648 -0.88133 -0.00094704 -0.59611 -0.00064055 1075.05926515787 105.93 0.3489 105.93 105.77 106.12 0 25 6 7 0 0 0 1.2567E-05 1 127889 79.004 66.443 1 51951000 2421 351 2238 2270 2844 2844 AQLSQYFDAVK 11 Unmodified _AQLSQYFDAVK_ 0 0 0 Q9Y2W2 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 MULTI-MSMS 210214_Eclipse_Hela_QC 635.327026367188 2 635.327328 1268.6401 -0.090053 -5.7213E-05 0.17116 0.00010874 0.081108 5.153E-05 635.327117993279 67.155 0.66457 67.155 66.797 67.461 0 29 13 3 0 0 0 0.0003514 2 73791 99.815 78.913 1 16123000 2422 4022 2239 2271 2845;2846 2846 AQLSTILEEEK 11 Unmodified _AQLSTILEEEK_ 0 0 0 Q05397 Q05397 Q05397 PTK2 Focal adhesion kinase 1 MSMS 210214_Eclipse_Hela_QC 630.839111328125 2 630.837725 1259.6609 NaN NaN NaN NaN NaN NaN NaN 57.068 1 57.068 56.568 57.568 0 0 0 0 0.024568 1 59800 51.445 39.732 1 2423 1855 2240 2272 2847 2847 AQLSVVDPDSAPGEIEYEVQR 21 Unmodified _AQLSVVDPDSAPGEIEYEVQR_ 0 0 0 Q6UVK1 Q6UVK1 Q6UVK1 CSPG4 Chondroitin sulfate proteoglycan 4 MULTI-MSMS 210214_Eclipse_Hela_QC 1151.56384277344 2 1151.56351 2301.11247 0.97463 0.0011223 -0.10388 -0.00011963 0.87075 0.0010027 1152.06478288196 84.012 0.44794 84.012 83.753 84.201 0 28 8 4 0 0 0 4.0932E-07 1 97407 94.728 85.678 1 5755400 2424 2476 2241 2273 2848 2848 AQLYIDCEK 9 Unmodified _AQLYIDCEK_ 0 0 0 CON__Q28194;P07996 CON__Q28194;P07996 CON__Q28194 THBS1 Thrombospondin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 570.274597167969 2 570.273706 1138.53286 0.3908 0.00022286 0.27064 0.00015434 0.66143 0.0003772 570.274069900811 35.087 0.49246 35.087 34.75 35.243 0 20 9 3 0 0 0 0.0078177 1 28613 57.96 46.795 1 8042700 + 2425 84;736 2242 2274 2849 2849 AQMVQEDLEK 10 Unmodified _AQMVQEDLEK_ 0 0 0 P26038 P26038 P26038 MSN Moesin MULTI-MSMS 210214_Eclipse_Hela_QC 595.78955078125 2 595.789721 1189.56489 0.74271 0.0004425 -0.20383 -0.00012144 0.53888 0.00032106 595.789732277749 30.4 0.847 30.4 30.076 30.923 0 46 16 4 0 0 0 4.0345E-07 1 21851 137.13 113.56 1 214300000 2426 1054 2243 2275 2850 2850 AQMVQEDLEK 10 Oxidation (M) _AQM(Oxidation (M))VQEDLEK_ AQM(1)VQEDLEK AQM(130)VQEDLEK 0 1 0 P26038 P26038 P26038 MSN Moesin MULTI-MSMS 210214_Eclipse_Hela_QC 603.78759765625 2 603.787178 1205.5598 0.57872 0.00034942 -0.14084 -8.5034E-05 0.43789 0.00026439 603.787056223869 30.41 0.5976 30.41 30.076 30.673 0 27 11 3 0 0 0 1.3273E-05 1 21928 128.36 106.23 1 13637000 2427 1054 2243 2276 2851 2851 266 AQNDLIWNIK 10 Unmodified _AQNDLIWNIK_ 0 0 0 P09874 P09874 P09874 PARP1 Poly [ADP-ribose] polymerase 1 MSMS 210214_Eclipse_Hela_QC 607.830322265625 2 607.830037 1213.64552 NaN NaN NaN NaN NaN NaN NaN 69.011 1 69.011 68.511 69.511 0 0 0 0 0.0027191 1 76544 103.8 79.028 1 2428 784 2244 2277 2852 2852 AQNLNPMVDVK 11 Unmodified _AQNLNPMVDVK_ 0 0 0 Q9UBE0 Q9UBE0 Q9UBE0 SAE1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 615.322875976562 2 614.821355 1227.62816 0.47101 0.00028959 -0.49917 -0.0003069 -0.028162 -1.7314E-05 614.82108633302 46.967 1.1441 46.967 46.18 47.324 0 51 22 3 0 0 0 0.00088399 1 45760 70.056 53.517 1 29327000 2429 3815 2245 2278 2853 2853 AQNTWGCGNSLR 12 Unmodified _AQNTWGCGNSLR_ 0 0 0 P02545 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 210214_Eclipse_Hela_QC 682.312438964844 2 682.312217 1362.60988 0.59246 0.00040424 -0.14589 -9.954E-05 0.44657 0.0003047 682.312271660884 30.349 1.146 30.349 29.976 31.122 0 62 22 4 0 0 0 7.8741E-31 1 21781 199.67 189.44 1 113070000 2430 640 2246 2279 2854 2854 AQPAQPADEPAEK 13 Unmodified _AQPAQPADEPAEK_ 0 0 0 P25786 P25786 P25786 PSMA1 Proteasome subunit alpha type-1 MULTI-MSMS 210214_Eclipse_Hela_QC 676.328369140625 2 676.328056 1350.64156 0.75264 0.00050903 -0.32091 -0.00021704 0.43173 0.00029199 676.327791559026 16.216 0.56603 16.216 16.146 16.712 0 48 27 3 0 0 0 3.5591E-06 1 2781 111.86 104.91 1 63432000 2431 1048 2247 2280 2855 2855 AQPGAAPGIYQQSAEASSSQGTAANSQSYTIMSPAVLK 38 Unmodified _AQPGAAPGIYQQSAEASSSQGTAANSQSYTIMSPAVLK_ 0 0 0 P98175 P98175 P98175 RBM10 RNA-binding protein 10 MULTI-MSMS 210214_Eclipse_Hela_QC 1257.28283691406 3 1256.61089 3766.81083 2.1158 0.0026587 0.19653 0.00024697 2.3123 0.0029056 1257.27995541167 85.659 0.44675 85.659 85.445 85.891 0 33 8 5 0 0 0 0.046564 1 99762 12.41 12.024 1 4060600 2432 1789 2248 2281 2856 2856 AQPGTLNLNNEVVK 14 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AQPGTLNLNNEVVK_ 1 0 0 Q8NEF9 Q8NEF9 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 770.413513183594 2 769.912287 1537.81002 1.261 0.00097086 -0.26587 -0.0002047 0.99513 0.00076617 769.912758078787 76.154 0.6472 76.154 75.93 76.577 0 26 12 3 0 0 0 9.7309E-05 1 86552 70.977 51.706 1 3804700 2433 2757 2249 2282 2857 2857 AQPLEDLAGFTELSETSGHTQESLTAGK 28 Unmodified _AQPLEDLAGFTELSETSGHTQESLTAGK_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 210214_Eclipse_Hela_QC 973.478515625 3 973.140235 2916.39888 1.1823 0.0011506 0.091272 8.882E-05 1.2736 0.0012394 973.474722361108 90.117 0.64549 90.117 89.809 90.455 0 55 12 6 0 0 0 0.056981 1 105815 11.65 9.3672 1 12901000 2434 1300 2250 2283 2858 2858 AQPLSLEELLAK 12 Unmodified _AQPLSLEELLAK_ 0 0 0 Q9BUQ8 Q9BUQ8 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 MULTI-MSMS 210214_Eclipse_Hela_QC 656.383178710938 2 656.37956 1310.74457 1.0121 0.00066434 0.34106 0.00022387 1.3532 0.0008882 656.379741645238 92.021 0.69687 92.021 91.748 92.444 0 25 13 2 0 0 0 0.051711 1 108434 33.039 14.259 1 20005000 2435 3296 2251 2284 2859 2859 AQPPDYTFPSGSGAHFPQVPGGAVR 25 Unmodified _AQPPDYTFPSGSGAHFPQVPGGAVR_ 0 0 0 Q9BTU6 Q9BTU6 Q9BTU6 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha MULTI-MSMS 210214_Eclipse_Hela_QC 847.418395996094 3 847.415417 2539.22442 1.1229 0.00095155 1.2558 0.0010642 2.3787 0.0020157 847.413962303126 73.328 0.7473 73.328 72.911 73.658 0 61 14 7 0 0 0 0.030839 1 82521 19.538 15.875 1 9751600 2436 3277 2252 2285 2860 2860 AQPPEAGPQGLHDLGR 16 Unmodified _AQPPEAGPQGLHDLGR_ 0 0 0 A0FGR8 A0FGR8 A0FGR8 ESYT2 Extended synaptotagmin-2 MSMS 210214_Eclipse_Hela_QC 548.281616210938 3 548.281382 1641.82232 NaN NaN NaN NaN NaN NaN NaN 37 1 37 36.5 37.5 0 0 0 0 0.017581 1 31404 43.532 36.161 1 2437 6 2253 2286 2861 2861 AQPPPDVEGDDCLPAYR 17 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AQPPPDVEGDDCLPAYR_ 1 0 0 Q9NUI1 Q9NUI1 Q9NUI1 DECR2 Peroxisomal 2,4-dienoyl-CoA reductase MULTI-MSMS 210214_Eclipse_Hela_QC 971.937683105469 2 971.435997 1940.85744 0.30583 0.00029709 0.85071 0.00082641 1.1565 0.0011235 971.938649051225 80.314 0.54597 80.314 80.06 80.606 0 20 10 3 0 0 0 0.0022795 1 92385 42.095 36.602 1 2898200 2438 3655 2254 2287 2862 2862 AQPSASLGVGYR 12 Unmodified _AQPSASLGVGYR_ 0 0 0 Q96PK6 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 MULTI-MSMS 210214_Eclipse_Hela_QC 603.317016601562 2 603.317294 1204.62004 0.30683 0.00018512 0.029362 1.7714E-05 0.33619 0.00020283 603.317314082167 37.945 0.79568 37.945 37.596 38.392 0 42 15 4 0 0 0 0.00040462 1 32725 72.848 45.023 1 39026000 2439 3111 2255 2288 2863 2863 AQPSVSLGAAYR 12 Unmodified _AQPSVSLGAAYR_ 0 0 0 Q96PK6 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 MULTI-MSMS 210214_Eclipse_Hela_QC 610.325134277344 2 610.325119 1218.63569 0.70953 0.00043304 0.25684 0.00015676 0.96637 0.0005898 610.325285318463 43.756 0.99568 43.756 43.294 44.29 0 54 19 4 0 0 0 0.004178 2 41399 52.278 42.497 1 43216000 2440 3111 2256 2289 2864;2865 2865 AQPSVSLGAPYR 12 Unmodified _AQPSVSLGAPYR_ 0 0 0 Q96PK6 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 MULTI-MSMS 210214_Eclipse_Hela_QC 623.333862304688 2 623.332944 1244.65134 0.67442 0.00042039 0.34382 0.00021432 1.0182 0.0006347 623.333157551869 46.3 0.84617 46.3 45.931 46.777 0 51 16 5 0 0 0 4.0914E-06 1 44414 114.84 76.548 1 46356000 2441 3111 2257 2290 2866 2866 AQPTTLVLPPQYVDDVISR 19 Unmodified _AQPTTLVLPPQYVDDVISR_ 0 0 0 Q6P2C8 Q6P2C8 Q6P2C8 MED27 Mediator of RNA polymerase II transcription subunit 27 MULTI-MSMS 210214_Eclipse_Hela_QC 1056.85095214844 2 1056.57041 2111.12627 1.9182 0.0020267 -0.040635 -4.2934E-05 1.8775 0.0019837 1057.07186032703 101.41 0.69657 101.41 101.1 101.79 0 32 13 3 0 0 0 0.057255 1 121735 25.718 20.224 1 2542300 2442 2448 2258 2291 2867 2867 AQPVQVAEGSEPDGFWEALGGK 22 Unmodified _AQPVQVAEGSEPDGFWEALGGK_ 0 0 0 P06396 P06396 P06396 GSN Gelsolin MULTI-MSMS 210214_Eclipse_Hela_QC 1137.05163574219 2 1136.54766 2271.08078 1.2634 0.0014359 0.75154 0.00085416 2.015 0.0022901 1137.04974739772 95.509 0.69268 95.509 95.124 95.816 0 52 13 6 0 0 0 7.8965E-05 1 113230 63.709 58.907 1 13105000 2443 696 2259 2292 2868 2868 AQPVQVAEGSEPDSFWEALGGK 22 Unmodified _AQPVQVAEGSEPDSFWEALGGK_ 0 0 0 CON__Q3SX14 CON__Q3SX14 CON__Q3SX14 MULTI-MSMS 210214_Eclipse_Hela_QC 1152.05615234375 2 1151.55295 2301.09134 1.7892 0.0020604 0.14683 0.00016908 1.936 0.0022295 1152.05471739912 97.841 0.79485 97.841 97.517 98.311 0 66 15 6 0 0 0 1.9838E-06 1 116478 81.619 76.62 1 32223000 + 2444 98 2260 2293 2869 2869 AQQALSELHTVEK 13 Unmodified _AQQALSELHTVEK_ 0 0 0 Q5T4S7 Q5T4S7 Q5T4S7 UBR4 E3 ubiquitin-protein ligase UBR4 MULTI-MSMS 210214_Eclipse_Hela_QC 485.593597412109 3 485.259696 1452.75726 0.32216 0.00015633 -0.28424 -0.00013793 0.037916 1.8399E-05 485.25960541324 30.881 0.54835 30.881 30.623 31.172 0 25 10 3 0 0 0 0.00056468 1 22624 59.607 45.928 1 9778600 2445 2358 2261 2294 2870 2870 AQQATPGGAAPTIFSR 16 Unmodified _AQQATPGGAAPTIFSR_ 0 0 0 Q9BX68 Q9BX68 Q9BX68 HINT2 Histidine triad nucleotide-binding protein 2, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 786.910217285156 2 786.910079 1571.8056 0.85778 0.000675 0.19036 0.0001498 1.0481 0.00082479 786.910272907608 52.386 0.64707 52.386 52.046 52.693 0 36 12 4 0 0 0 2.9621E-07 1 53024 105.25 70.531 1 16607000 2446 3338 2262 2295 2871 2871 AQQEDALAQQAFEEAR 16 Unmodified _AQQEDALAQQAFEEAR_ 0 0 0 Q13951 Q13951 Q13951 CBFB Core-binding factor subunit beta MULTI-MSMS 210214_Eclipse_Hela_QC 903.429321289062 2 902.926654 1803.83875 1.0341 0.00093371 0.10302 9.3017E-05 1.1371 0.0010267 903.428244051546 63.593 0.74662 63.593 63.075 63.822 0 44 14 5 0 0 0 2.8695E-07 1 68791 105.65 105.65 1 18249000 2447 2042 2263 2296 2872 2872 AQQEFAAGVFSNPAVR 16 Unmodified _AQQEFAAGVFSNPAVR_ 0 0 0 O14828 O14828 O14828 SCAMP3 Secretory carrier-associated membrane protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 846.428955078125 2 846.428636 1690.84272 1.3363 0.0011311 -0.17611 -0.00014906 1.1602 0.00098205 846.427692140524 69.346 1.095 69.346 69.078 70.173 0 48 21 4 0 0 0 2.9096E-11 1 76879 127.37 95.942 1 24076000 2448 212 2264 2297 2873 2873 AQQEQELAADAFK 13 Unmodified _AQQEQELAADAFK_ 0 0 0 P14314 P14314 P14314 PRKCSH Glucosidase 2 subunit beta MULTI-MSMS 210214_Eclipse_Hela_QC 725.356323242188 2 724.854438 1447.69432 0.98762 0.00071588 0.096083 6.9646E-05 1.0837 0.00078552 724.854459006726 49.262 0.94283 49.262 48.888 49.831 0 68 18 6 0 0 0 4.6874E-19 2 48539 160.36 126.63 1 190770000 2449 876 2265 2298 2874;2875 2874 AQQGIVFLDEVDK 13 Unmodified _AQQGIVFLDEVDK_ 0 0 0 O76031 O76031 O76031 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 731.884948730469 2 731.382831 1460.75111 1.2062 0.0008822 -0.48076 -0.00035162 0.72544 0.00053057 731.382847073606 77.881 0.5979 77.881 77.572 78.17 0 35 11 4 0 0 0 0.00015894 1 88814 83.397 53.142 1 9204900 2450 507 2266 2299 2876 2876 AQQLAEVEVK 10 Unmodified _AQQLAEVEVK_ 0 0 0 Q14764 Q14764 Q14764 MVP Major vault protein MULTI-MSMS 210214_Eclipse_Hela_QC 557.808898925781 2 557.808771 1113.60299 0.21607 0.00012052 -0.61203 -0.0003414 -0.39597 -0.00022087 557.808790468751 32.862 0.47115 32.862 32.66 33.131 0 20 9 3 0 0 0 0.00012388 2 25508 106.6 71.775 1 7790100 2451 2111 2267 2300 2877;2878 2878 AQQLSITSK 9 Unmodified _AQQLSITSK_ 0 0 0 Q86UP2 Q86UP2 Q86UP2 KTN1 Kinectin MULTI-MSMS 210214_Eclipse_Hela_QC 488.277038574219 2 488.277106 974.53966 0.21462 0.0001048 -0.18266 -8.9187E-05 0.031968 1.5609E-05 488.277160389764 24.522 0.5461 24.522 24.319 24.865 0 18 10 3 0 0 0 0.0091732 1 13560 54.436 26.7 1 10921000 2452 2581 2268 2301 2879 2879 AQQMHTGPVLDVCWSDDGSK 20 Unmodified _AQQMHTGPVLDVCWSDDGSK_ 0 0 0 P78406 P78406 P78406 RAE1 mRNA export factor MULTI-MSMS 210214_Eclipse_Hela_QC 744.667297363281 3 744.333377 2229.9783 0.60006 0.00044664 0.050483 3.7576E-05 0.65054 0.00048422 744.667862711408 61.675 0.54762 61.675 61.392 61.94 0 44 10 5 0 0 0 8.5123E-06 2 66109 75.358 75.216 1 20805000 2453 1750 2269 2302 2880;2881 2880 AQQSLELIQSK 11 Unmodified _AQQSLELIQSK_ 0 0 0 Q86UP2 Q86UP2 Q86UP2 KTN1 Kinectin MULTI-MSMS 210214_Eclipse_Hela_QC 622.846496582031 2 622.845884 1243.67722 0.47172 0.00029381 0.33533 0.00020886 0.80706 0.00050267 622.84607705005 42.694 0.69747 42.694 42.398 43.095 0 36 13 3 0 0 0 0.00032145 1 39347 85.29 58.597 1 17794000 2454 2581 2270 2303 2882 2882 AQQVAVQEQEIAR 13 Unmodified _AQQVAVQEQEIAR_ 0 0 0 O75955 O75955 O75955 FLOT1 Flotillin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 735.389526367188 2 735.388979 1468.76341 0.68976 0.00050725 -0.52064 -0.00038288 0.16912 0.00012437 735.389027679844 33.136 0.7359 33.136 32.79 33.526 0 43 14 5 0 0 0 0.00022118 1 25735 77.062 48.858 1 21447000 2455 502 2271 2304 2883 2883 AQQVSQGLDVLTAK 14 Unmodified _AQQVSQGLDVLTAK_ 0 0 0 P18206 P18206 P18206 VCL Vinculin MULTI-MSMS 210214_Eclipse_Hela_QC 729.904602050781 2 729.401555 1456.78856 1.4891 0.0010861 -0.66996 -0.00048867 0.8191 0.00059746 729.4015886485 56.922 1.0448 56.922 56.517 57.562 0 79 20 5 0 0 0 3.4496E-07 1 59397 143.24 115.23 1 49082000 2456 952 2272 2305 2884 2884 AQSINITELNLPQLEMLK 18 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AQSINITELNLPQLEMLK_ 1 0 0 Q99471 Q99471 Q99471 PFDN5 Prefoldin subunit 5 MULTI-MSMS 210214_Eclipse_Hela_QC 1049.5673828125 2 1049.06665 2096.11874 1.1278 0.0011831 -0.52501 -0.00055077 0.60278 0.00063235 1049.56748168993 110.77 0.39799 110.77 110.65 111.05 0 19 7 3 0 0 0 1.6746E-18 1 134526 170.52 154.76 1 48003000 2457 3162 2273 2306 2885 2885 AQSLVISPPAPSPR 14 Unmodified _AQSLVISPPAPSPR_ 0 0 0 P46013 P46013 P46013 MKI67 Antigen KI-67 MULTI-MSMS 210214_Eclipse_Hela_QC 710.402587890625 2 710.401358 1418.78816 1.2773 0.00090741 0.49534 0.00035189 1.7727 0.0012593 710.401517277537 57.215 0.79627 57.215 56.716 57.512 0 43 15 4 0 0 0 0.00012395 1 59710 80.979 65.719 1 6369600 2458 1300 2274 2307 2886 2886 AQSSQDAVSSMNLFDLGGQYLR 22 Unmodified _AQSSQDAVSSMNLFDLGGQYLR_ 0 0 0 Q9UHX1 Q9UHX1 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 MULTI-MSMS 210214_Eclipse_Hela_QC 1194.06884765625 2 1194.06844 2386.12232 0.78103 0.0009326 -0.003609 -4.3094E-06 0.77742 0.00092829 1194.06812662351 106.18 0.39805 106.18 105.97 106.37 0 34 7 8 0 0 0 2.4687E-29 1 128236 162.37 148.69 1 96150000 2459 3875 2275 2308 2887 2887 AQTAHIVLEDGTK 13 Unmodified _AQTAHIVLEDGTK_ 0 0 0 P31327 P31327 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 461.580688476562 3 461.580658 1381.72014 -0.099189 -4.5784E-05 0.35607 0.00016436 0.25689 0.00011857 461.580839446174 26.464 0.69721 26.464 26.258 26.955 0 42 13 5 0 0 0 2.1047E-05 1 16253 97.273 85.954 1 119230000 2460 1141 2276 2309 2888 2888 AQTAHIVLEDGTK 13 Unmodified _AQTAHIVLEDGTK_ 0 0 0 P31327 P31327 P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial MSMS 210214_Eclipse_Hela_QC 691.867797851562 2 691.867348 1381.72014 NaN NaN NaN NaN NaN NaN NaN 26.399 1 26.399 25.899 26.899 0 0 0 0 5.0103E-41 1 16263 235.31 189.63 1 2461 1141 2276 2309 2889 2889 AQTEGINISEEALNHLGEIGTK 22 Unmodified _AQTEGINISEEALNHLGEIGTK_ 0 0 0 Q9Y265 Q9Y265 Q9Y265 RUVBL1 RuvB-like 1 MULTI-MSMS 210214_Eclipse_Hela_QC 775.394104003906 3 775.395799 2323.16557 1.4651 0.001136 0.23214 0.00018 1.6973 0.001316 775.730128157019 83.23 1.2324 83.23 82.521 83.753 0 95 25 7 0 0 0 1.2795E-10 1 96096 110.38 106.35 1 95583000 2462 3991 2277 2310 2890 2890 AQTEWNTGTWR 11 Unmodified _AQTEWNTGTWR_ 0 0 0 Q969E2 Q969E2 Q969E2 SCAMP4 Secretory carrier-associated membrane protein 4 MULTI-MSMS 210214_Eclipse_Hela_QC 675.316528320312 2 675.315283 1348.61601 1.1888 0.00080281 -0.30101 -0.00020328 0.88778 0.00059953 675.315206994549 47.1 0.94505 47.1 46.727 47.672 0 37 18 3 0 0 0 2.4612E-07 1 45653 120.12 89.865 1 16338000 2463 2940 2278 2311 2891 2891 AQTLPTSVVTITSESSPGK 19 Unmodified _AQTLPTSVVTITSESSPGK_ 0 0 0 Q01082 Q01082 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 210214_Eclipse_Hela_QC 952.506774902344 2 952.00457 1901.99459 0.5665 0.00053931 -0.25269 -0.00024056 0.31381 0.00029875 952.004290850588 69.002 0.62369 69.002 68.704 69.327 0 40 12 4 0 0 0 3.3205E-06 2 76400 93.494 88.215 1 21621000 2464 1809 2279 2312 2892;2893 2892 AQTLPTSVVTITSESSPGKR 20 Unmodified _AQTLPTSVVTITSESSPGKR_ 0 0 1 Q01082 Q01082 Q01082 SPTBN1 Spectrin beta chain, non-erythrocytic 1 MULTI-MSMS 210214_Eclipse_Hela_QC 687.039428710938 3 687.039176 2058.0957 1.2788 0.00087862 0.39371 0.00027049 1.6726 0.0011491 687.039143744226 56.734 0.44749 56.734 56.517 56.964 0 24 8 4 0 0 0 0.038007 1 59431 21.616 17.177 1 4389300 2465 1809 2280 2313 2894 2894 AQTYELQESNVQLK 14 Unmodified _AQTYELQESNVQLK_ 0 0 0 Q9P0V9 Q9P0V9 Q9P0V9 SEPT10 Septin-10 MULTI-MSMS 210214_Eclipse_Hela_QC 826.423706054688 2 825.920309 1649.82606 1.4769 0.0012198 0.026835 2.2163E-05 1.5038 0.001242 825.92022242823 51.547 0.49745 51.547 51.299 51.797 0 28 9 4 0 0 0 0.00054734 1 51896 77.64 60.204 1 8348400 2466 3791 2281 2314 2895 2895 AQVADVVVSR 10 Unmodified _AQVADVVVSR_ 0 0 0 P49327 P49327 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase MULTI-MSMS 210214_Eclipse_Hela_QC 522.296203613281 2 522.29583 1042.57711 0.040106 2.0947E-05 -0.52543 -0.00027443 -0.48532 -0.00025348 522.295787947851 34.551 0.48574 34.551 34.265 34.75 0 23 10 3 0 0 0 0.0036778 1 27775 63.076 32.002 1 14523000 2467 1365 2282 2315 2896 2896 AQVAMSTLPVEDEESSESR 19 Acetyl (Protein N-term) _(Acetyl (Protein N-term))AQVAMSTLPVEDEESSESR_ 1 0 0 P78347 P78347 P78347 GTF2I General transcription factor II-I MULTI-MSMS 210214_Eclipse_Hela_QC 1054.4814453125 2 1053.97842 2105.94229 1.1413 0.0012029 0.9693 0.0010216 2.1106 0.0022245 1054.48095873216 91.325 0.59666 91.325 91.052 91.648 0 20 11 2 0 0 0 2.8909E-13 1 107538 127.76 122.27 1 7995200 2468 1746 2283 2316 2897 2897 AQVARPGGDTIFGK 14 Unmodified _AQVARPGGDTIFGK_ 0 0 1 P49773 P49773 P49773 HINT1 Histidine triad nucleotide-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 472.924468994141 3 472.924647 1415.75211 -0.0049804 -2.3554E-06 0.19436 9.1916E-05 0.18938 8.9561E-05 472.924741214251 33.844 0.9341 33.844 33.477 34.411 0 50 18 4 0 0 0 0.00039768 1 26765 51.643 43.86 1 47051000 2469 1395 2284 2317 2898 2898 AQVARPGGDTIFGK 14 Unmodified _AQVARPGGDTIFGK_ 0 0 1 P49773 P49773 P49773 HINT1 Histidine triad nucleotide-binding protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 708.883239746094 2 708.883333 1415.75211 0.59421 0.00042122 0.063905 4.5302E-05 0.65811 0.00046652 708.883368606069 33.787 0.49016 33.787 33.576 34.066 0 29 9 4 0 0 0 0.00086209 1 26798 91.937 72.176 1 6940400 2470 1395 2284 2317 2899 2899 AQVDSSFLSLYDSHVAK 17 Unmodified _AQVDSSFLSLYDSHVAK_ 0 0 0 Q8N2F6 Q8N2F6 Q8N2F6 ARMC10 Armadillo repeat-containing protein 10 MULTI-MSMS 210214_Eclipse_Hela_QC 622.980041503906 3 622.979257 1865.91594 0.51591 0.0003214 0.22818 0.00014215 0.74409 0.00046355 623.31370874337 74.055 0.64772 74.055 73.609 74.256 0 23 12 2 0 0 0 0.04235 1 83594 20.954 16.711 1 3981600 2471 2673 2285 2318 2900 2900 AQVEEFLAQHGSEYQSVK 18 Unmodified _AQVEEFLAQHGSEYQSVK_ 0 0 0 Q02809 Q02809 Q02809 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 684 3 684.000721 2048.98033 0.87333 0.00059736 -0.098568 -6.7421E-05 0.77476 0.00052994 684.33494369465 56.496 1.692 56.496 56.118 57.81 0 86 33 5 0 0 0 0.00012135 1 58887 61.648 57.807 1 34406000 2472 1832 2286 2319 2901 2901 AQVEIVTDGEEPAEMIQVLGPK 22 Unmodified _AQVEIVTDGEEPAEMIQVLGPK_ 0 0 0 P40121 P40121 P40121 CAPG Macrophage-capping protein MULTI-MSMS 210214_Eclipse_Hela_QC 1178.23034667969 2 1177.10142 2352.18828 1.1971 0.0014091 -0.17254 -0.00020309 1.0246 0.001206 1177.60283591816 103.91 1.2438 103.91 103.58 104.83 0 83 24 6 0 0 0 1.0113E-20 2 124858 134.88 128 1 48873000 2473 1236 2287 2320 2902;2903 2903 AQVEQELTTLR 11 Unmodified _AQVEQELTTLR_ 0 0 0 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 644.349304199219 2 644.348791 1286.68303 1.3025 0.00083924 0.3224 0.00020774 1.6249 0.001047 644.348985847045 51.131 0.62177 51.131 50.926 51.548 0 37 12 4 0 0 0 2.801E-07 1 51309 118.18 78.176 1 22635000 2474 2158 2288 2321 2904 2904 AQVFSCPACR 10 Unmodified _AQVFSCPACR_ 0 0 0 Q96T88;Q96PU4 Q96T88 Q96T88 UHRF1;UHRF2 E3 ubiquitin-protein ligase UHRF1;E3 ubiquitin-protein ligase UHRF2 MULTI-MSMS 210214_Eclipse_Hela_QC 598.271606445312 2 598.270975 1194.5274 0.60756 0.00036349 0.37973 0.00022718 0.98729 0.00059067 598.271153999703 28.747 0.41854 28.747 28.525 28.944 0 14 8 2 0 0 0 0.0048464 1 19618 58.981 51.041 1 9299300 2475 3150 2289 2322 2905 2905 AQVIYTR 7 Unmodified _AQVIYTR_ 0 0 0 P62851 P62851 P62851 RPS25 40S ribosomal protein S25 MULTI-MSMS 210214_Eclipse_Hela_QC 425.742889404297 2 425.742702 849.470852 0.16862 7.1787E-05 1.3651 0.00058117 1.5337 0.00065296 425.743103621681 23.426 0.4985 23.426 23.351 23.849 0 12 9 2 0 0 0 0.0070489 1 12081 86.472 58.05 1 10418000 2476 1683 2290 2323 2906 2906 AQVLPPLR 8 Unmodified _AQVLPPLR_ 0 0 0 Q9NPQ8 Q9NPQ8 Q9NPQ8 RIC8A Synembryn-A MULTI-MSMS 210214_Eclipse_Hela_QC 447.281829833984 2 447.281995 892.549437 0.12266 5.4863E-05 -0.054451 -2.4355E-05 0.068207 3.0508E-05 447.281925969921 45.587 0.49722 45.587 45.284 45.781 0 15 9 2 0 0 0 0.010017 1 43626 66.993 34.523 1 3647400 2477 3590 2291 2324 2907 2907 AQVMEVK 7 Unmodified _AQVMEVK_ 0 0 0 O60841 O60841 O60841 EIF5B Eukaryotic translation initiation factor 5B MULTI-MSMS 210214_Eclipse_Hela_QC 402.717681884766 2 402.717839 803.421125 -0.15497 -6.2411E-05 0.26749 0.00010772 0.11251 4.5311E-05 402.717932541156 21.684 0.64681 21.684 21.509 22.156 0 23 12 2 0 0 0 0.013754 1 9519 72.138 12.498 1 13738000 2478 401 2292 2325 2908 2908 AQVPGPLTPEMEAR 14 Unmodified _AQVPGPLTPEMEAR_ 0 0 0 Q9H8Y5 Q9H8Y5 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 748.384216308594 2 748.382308 1494.75006 1.2754 0.00095451 1.1565 0.00086554 2.432 0.00182 748.383395876621 58.151 0.79618 58.151 57.711 58.507 0 31 15 3 0 0 0 0.041961 1 61478 32.946 26.563 1 3454100 2479 3510 2293 2326 2909 2909 AQVQEFCDYGTK 12 Unmodified _AQVQEFCDYGTK_ 0 0 0 Q86U44 Q86U44 Q86U44 METTL3 N6-adenosine-methyltransferase 70 kDa subunit MULTI-MSMS 210214_Eclipse_Hela_QC 723.323059082031 2 723.321916 1444.62928 0.37763 0.00027315 -0.011008 -7.9625E-06 0.36662 0.00026519 723.32176333555 39.486 0.55099 39.486 39.265 39.816 0 22 11 3 0 0 0 0.00026187 1 34929 81.865 77.566 1 6123800 2480 2575 2294 2327 2910 2910 AQVQLQLFK 9 Unmodified _AQVQLQLFK_ 0 0 0 Q14683 Q14683 Q14683 SMC1A Structural maintenance of chromosomes protein 1A MSMS 210214_Eclipse_Hela_QC 537.819396972656 2 537.818941 1073.62333 NaN NaN NaN NaN NaN NaN NaN 64.563 1 64.563 64.063 65.063 0 0 0 0 0.039615 1 70328 53.166 34.384 1 2481 2100 2295 2328 2911 2911 AQVSLLIR 8 Unmodified _AQVSLLIR_ 0 0 0 Q99623 Q99623 Q99623 PHB2 Prohibitin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 450.287322998047 2 450.287277 898.560001 0.39178 0.00017641 0.11234 5.0584E-05 0.50412 0.000227 450.287277737587 52.542 0.74707 52.542 52.195 52.942 0 34 14 3 0 0 0 0.018933 1 53273 53.679 25.573 1 16209000 2482 3180 2296 2329 2912 2912 AQVTSLLGELQESQSR 16 Unmodified _AQVTSLLGELQESQSR_ 0 0 0 Q9Y6K9 Q9Y6K9 Q9Y6K9 IKBKG NF-kappa-B essential modulator MULTI-MSMS 210214_Eclipse_Hela_QC 873.4560546875 2 873.455047 1744.89554 1.3999 0.0012228 0.41716 0.00036437 1.8171 0.0015872 873.957150911929 80.884 0.69556 80.884 80.507 81.203 0 31 13 4 0 0 0 3.5616E-07 1 93051 102.66 87.785 1 5764300 2483 4159 2297 2330 2913 2913 AQVVSNLK 8 Unmodified _AQVVSNLK_ 0 0 0 Q9Y490 Q9Y490 Q9Y490 TLN1 Talin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 429.755676269531 2 429.75581 857.497067 -0.046656 -2.0051E-05 -0.18932 -8.136E-05 -0.23597 -0.00010141 429.755770039291 22.068 0.24857 22.068 21.908 22.156 0 8 4 2 0 0 0 0.0053804 1 10045 79.451 41.129 1 14910000 2484 4084 2298 2331 2914 2914 AQWANPFDPSK 11 Unmodified _AQWANPFDPSK_ 0 0 0 CON__Q9TT36;P05543 CON__Q9TT36 CON__Q9TT36 SERPINA7 Thyroxine-binding globulin MULTI-MSMS 210214_Eclipse_Hela_QC 630.804382324219 2 630.80402 1259.59349 1.2565 0.00079261 -0.22144 -0.00013968 1.0351 0.00065293 630.804001223781 65.662 0.89552 65.662 65.304 66.199 0 47 17 4 0 0 0 0.00016664 1 71629 94.309 81.218 1 20605000 + 2485 115 2299 2332 2915 2915 AQYDELAR 8 Unmodified _AQYDELAR_ 0 0 0 P05783 P05783 P05783 KRT18 Keratin, type I cytoskeletal 18 MULTI-MSMS 210214_Eclipse_Hela_QC 483.238159179688 2 483.237981 964.461409 0.24535 0.00011856 -0.61694 -0.00029813 -0.37158 -0.00017956 483.237623723387 27.871 1.0344 27.871 27.403 28.437 0 75 20 5 0 0 0 0.032115 1 18812 48.561 6.9089 1 391040000 2486 692 2300 2333 2916 2916 AQYEDIANR 9 Unmodified _AQYEDIANR_ 0 0 0 CON__P05787;P05787 CON__P05787 CON__P05787 KRT8 Keratin, type II cytoskeletal 8 MULTI-MSMS 210214_Eclipse_Hela_QC 540.25927734375 2 540.259445 1078.50434 -0.092328 -4.9881E-05 -0.66562 -0.00035961 -0.75795 -0.00040949 540.25912129021 26.183 1.096 26.183 25.959 27.055 0 51 21 4 0 0 0 5.4427E-11 1 15885 177.78 158.97 1 950970000 + 2487 57 2301 2334 2917 2917 AQYEEMAK 8 Unmodified _AQYEEMAK_ 0 0 0 CON__P08729;CON__Q3KNV1;P08729 CON__P08729;CON__Q3KNV1 CON__P08729 KRT7 Keratin, type II cytoskeletal 7 MULTI-MSMS 210214_Eclipse_Hela_QC 485.221069335938 2 485.220943 968.427332 0.042679 2.0709E-05 -0.3767 -0.00018278 -0.33403 -0.00016208 485.220766448013 21.185 0.89694 21.185 20.911 21.808 0 42 17 5 0 0 0 0.00045785 1 8723 125.25 96.724 1 245800000 + 2488 60;93 2302 2335 2918 2918 AQYEQTLAELHR 12 Unmodified _AQYEQTLAELHR_ 0 0 0 Q9UKS6 Q9UKS6 Q9UKS6 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 486.916473388672 3 486.91604 1457.72629 0.62535 0.00030449 -0.084301 -4.1048E-05 0.54105 0.00026344 486.916022359251 43.636 0.79704 43.636 43.244 44.041 0 47 15 4 0 0 0 0.00014835 1 40623 63.091 47.335 1 41005000 2489 3916 2303 2336 2919 2919 AQYPIADLVK 10 Unmodified _AQYPIADLVK_ 0 0 0 Q13423 Q13423 Q13423 NNT NAD(P) transhydrogenase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 559.31640625 2 559.316232 1116.61791 1.3162 0.00073617 -0.033599 -1.8792E-05 1.2826 0.00071737 559.316114305096 65.629 0.64738 65.629 65.203 65.851 0 38 12 4 0 0 0 0.027282 1 71524 42.19 30.422 1 16583000 2490 1982 2304 2337 2920 2920 AQYVLAK 7 Unmodified _AQYVLAK_ 0 0 0 Q9NXG2 Q9NXG2 Q9NXG2 THUMPD1 THUMP domain-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 396.734008789062 2 396.734346 791.454139 -0.59606 -0.00023648 -0.16366 -6.4931E-05 -0.75972 -0.00030141 396.734234836137 24.877 0.39758 24.877 24.717 25.114 0 12 7 2 0 0 0 0.021979 1 14098 62.978 18.447 1 7261100 2491 3728 2305 2338 2921 2921 AQYYLPDGSTIEIGPSR 17 Unmodified _AQYYLPDGSTIEIGPSR_ 0 0 0 P61163 P61163 P61163 ACTR1A Alpha-centractin MULTI-MSMS 210214_Eclipse_Hela_QC 934.467834472656 2 933.965248 1865.91594 1.6824 0.0015713 -0.025752 -2.4051E-05 1.6566 0.0015472 934.466685177594 89.212 1.0443 89.212 88.765 89.809 0 68 20 5 0 0 0 1.0184E-11 2 104499 136.99 122.11 1 32243000 2492 1606 2306 2339 2922;2923 2922 ARDDLITDLLNEAK 14 Unmodified _ARDDLITDLLNEAK_ 0 0 1 P36543 P36543 P36543 ATP6V1E1 V-type proton ATPase subunit E 1 MULTI-MSMS 210214_Eclipse_Hela_QC 529.953002929688 3 529.61766 1585.83115 1.0882 0.00057632 -0.17927 -9.4945E-05 0.9089 0.00048137 529.617497912756 93.805 0.69625 93.805 93.438 94.135 0 34 13 4 0 0 0 0.00021176 1 110878 63.709 57.411 1 3777400 2493 1206 2307 2340 2924 2924 ARDDLITDLLNEAK 14 Unmodified _ARDDLITDLLNEAK_ 0 0 1 P36543 P36543 P36543 ATP6V1E1 V-type proton ATPase subunit E 1 MULTI-SECPEP 210214_Eclipse_Hela_QC 793.957641601562 2 793.922852 1585.83115 1.8551 0.0014728 0.27023 0.00021454 2.1253 0.0016873 793.922947569203 93.823 0.79572 93.823 93.438 94.234 0 49 15 5 0 0 0 0.038054 1 111050 63.662 46.495 1 8102900 2494 1206 2307 2340 2925 2925 ARENPSEEAQNLVEFTDEEGYGR 23 Unmodified _ARENPSEEAQNLVEFTDEEGYGR_ 0 0 1 Q12874 Q12874 Q12874 SF3A3 Splicing factor 3A subunit 3 MULTI-MSMS 210214_Eclipse_Hela_QC 881.06640625 3 880.731799 2639.17357 1.1071 0.00097504 0.12468 0.00010981 1.2318 0.0010849 881.066332660385 73.19 0.797 73.19 72.861 73.658 0 51 15 5 0 0 0 8.9567E-10 1 82327 98.121 94.318 1 13845000 2495 1917 2308 2341 2926 2926 ARFEELCSDLFR 12 Unmodified _ARFEELCSDLFR_ 0 0 1 P0DMV9;P0DMV8;P17066;P48741 P0DMV9;P17066 P0DMV9 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 210214_Eclipse_Hela_QC 514.917175292969 3 514.917164 1541.72966 0.51847 0.00026697 -0.3583 -0.0001845 0.16017 8.2472E-05 514.917100084344 69.799 1.144 69.799 69.477 70.621 0 60 22 5 0 0 0 0.0021992 1 77484 60.628 51.807 1 31387000 2496 792;926 2309 2342 2927 2927 ARFEELCSDLFR 12 Unmodified _ARFEELCSDLFR_ 0 0 1 P0DMV9;P0DMV8;P17066;P48741 P0DMV9;P17066 P0DMV9 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 MULTI-MSMS 210214_Eclipse_Hela_QC 771.873046875 2 771.872108 1541.72966 1.163 0.0008977 -0.2138 -0.00016503 0.94921 0.00073267 771.872220421059 69.793 0.74644 69.793 69.477 70.223 0 40 14 4 0 0 0 0.0029191 1 77541 101.93 85.675 1 19920000 2497 792;926 2309 2342 2928 2928 ARFEELNADLFR 12 Unmodified _ARFEELNADLFR_ 0 0 1 P11142;P54652 P11142 P11142 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 494.2568359375 3 494.256285 1479.74703 0.83052 0.00041049 0.10205 5.0438E-05 0.93256 0.00046093 494.256386915943 67.948 1.1926 67.948 67.561 68.753 0 77 23 5 0 0 0 0.00012321 2 74720 95.417 80.386 1 68617000 2498 819 2310 2343 2929;2930 2929 ARFEELNADLFR 12 Unmodified _ARFEELNADLFR_ 0 0 1 P11142;P54652 P11142 P11142 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 MULTI-MSMS 210214_Eclipse_Hela_QC 740.881774902344 2 740.88079 1479.74703 1.3167 0.00097549 0.033693 2.4963E-05 1.3504 0.0010005 740.881022534335 67.932 1.0436 67.932 67.561 68.604 0 71 20 6 0 0 0 0.0002818 1 74789 117.23 117.23 1 40435000 2499 819 2310 2343 2931 2931 ARFEEVLSK 9 Unmodified _ARFEEVLSK_ 0 0 1 Q96TA1 Q96TA1 Q96TA1 FAM129B Niban-like protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 539.798461914062 2 539.798206 1077.58186 0.65692 0.00035461 -0.099981 -5.3969E-05 0.55694 0.00030064 539.798081679633 28.85 0.5768 28.85 28.604 29.181 0 19 11 2 0 0 0 0.011617 1 19676 91.584 20.083 1 17354000 2500 3151 2311 2344 2932 2932 ARHEVLLISAEQDK 14 Unmodified _ARHEVLLISAEQDK_ 0 0 1 Q00341 Q00341 Q00341 HDLBP Vigilin MULTI-MSMS 210214_Eclipse_Hela_QC 536.96240234375 3 536.96165 1607.86312 0.28395 0.00015247 0.05031 2.7014E-05 0.33426 0.00017949 536.961669809493 29.573 0.49695 29.573 29.231 29.728 0 15 9 2 0 0 0 0.019942 1 20696 37.177 31.803 1 5412300 2501 1796 2312 2345 2933 2933 ARLEIEPEWAYGK 13 Unmodified _ARLEIEPEWAYGK_ 0 0 1 Q00688 Q00688 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 MULTI-MSMS 210214_Eclipse_Hela_QC 521.606079101562 3 521.271824 1560.79364 -0.018034 -9.4005E-06 0.063266 3.2979E-05 0.045232 2.3578E-05 521.27186889817 61.607 0.69661 61.607 61.293 61.989 0 39 13 4 0 0 0 0.0012767 1 66087 49.298 43.022 1 12933000 2502 1805 2313 2346 2934 2934 ARLEIEPEWAYGK 13 Unmodified _ARLEIEPEWAYGK_ 0 0 1 Q00688 Q00688 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 MULTI-MSMS 210214_Eclipse_Hela_QC 781.906433105469 2 781.404098 1560.79364 0.67716 0.00052913 1.1749 0.00091806 1.852 0.0014472 781.40457763697 61.609 0.6945 61.609 61.392 62.087 0 28 13 3 0 0 0 0.0016372 2 66101 90.146 73.514 1 14602000 2503 1805 2313 2346 2935;2936 2935 ARPAEVGGMQLR 12 Unmodified _ARPAEVGGMQLR_ 0 0 1 P33316 P33316 P33316 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 428.899353027344 3 428.899556 1283.67684 -0.49282 -0.00021137 0.087174 3.7389E-05 -0.40565 -0.00017398 428.899649075731 27.379 0.59267 27.379 27.154 27.747 0 34 11 5 0 0 0 6.5574E-08 1 17615 107.18 90.523 1 33926000 2504 1165 2314 2347 2937 2937 ARPAEVGGMQLR 12 Unmodified _ARPAEVGGMQLR_ 0 0 1 P33316 P33316 P33316 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial MSMS 210214_Eclipse_Hela_QC 642.845458984375 2 642.845696 1283.67684 NaN NaN NaN NaN NaN NaN NaN 27.341 1 27.341 26.841 27.841 0 0 0 0 0.00068105 1 17619 125.74 93.976 1 2505 1165 2314 2347 2938 2938 ARPFPDGLAEDIDK 14 Unmodified _ARPFPDGLAEDIDK_ 0 0 1 P13639 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 210214_Eclipse_Hela_QC 515.263488769531 3 515.263217 1542.76782 0.39557 0.00020382 -0.0020033 -1.0322E-06 0.39356 0.00020279 515.26332135614 58.571 1.7409 58.571 57.86 59.601 0 141 34 6 0 0 0 6.6213E-07 3 61520 89.911 75.724 1 181510000 2506 861 2315 2348 2939;2940;2941 2940 ARPFPDGLAEDIDK 14 Unmodified _ARPFPDGLAEDIDK_ 0 0 1 P13639 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 210214_Eclipse_Hela_QC 772.896545410156 2 772.391187 1542.76782 1.0316 0.00079679 -0.012547 -9.6909E-06 1.019 0.0007871 772.391265194101 58.585 1.1453 58.585 58.109 59.254 0 78 22 5 0 0 0 0.00078637 2 61494 92.856 55.16 1 65509000 2507 861 2315 2348 2942;2943 2942 ARPFPDGLAEDIDKGEVSAR 20 Unmodified _ARPFPDGLAEDIDKGEVSAR_ 0 0 2 P13639 P13639 P13639 EEF2 Elongation factor 2 MULTI-MSMS 210214_Eclipse_Hela_QC 536.775634765625 4 536.524913 2142.07055 1.3193 0.00070783 -0.11114 -5.9627E-05 1.2081 0.0006482 536.775595214979 60.614 0.89562 60.614 60.149 61.045 0 62 17 5 0 0 0 0.017347 1 64550 32.706 23.542 1 6913100 2508 861 2316 2349 2944 2944 ARQEELYSELQAR 13 Unmodified _ARQEELYSELQAR_ 0 0 1 Q15149 Q15149 Q15149 PLEC Plectin MULTI-MSMS 210214_Eclipse_Hela_QC 531.940185546875 3 531.605754 1591.79543 0.22839 0.00012142 0.038445 2.0438E-05 0.26684 0.00014185 531.605959256198 40.588 0.84608 40.588 40.213 41.059 0 49 16 4 0 0 0 0.017643 1 36316 31.914 20.44 1 16178000 2509 2158 2317 2350 2945 2945 ASAAFSSVGSVITK 14 Unmodified _ASAAFSSVGSVITK_ 0 0 0 P55327 P55327 P55327 TPD52 Tumor protein D52 MULTI-MSMS 210214_Eclipse_Hela_QC 662.860229492188 2 662.858992 1323.70343 1.0083 0.00066837 -0.020772 -1.3769E-05 0.98754 0.0006546 662.85899761435 57.327 0.89578 57.327 56.915 57.81 0 51 17 4 0 0 0 8.2702E-10 1 60118 130.56 95.021 1 28944000 2510 1541 2318 2351 2946 2946 ASACGAPGPGGALGSQAPSWYHR 23 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASACGAPGPGGALGSQAPSWYHR_ 1 0 0 O15357 O15357 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 MULTI-MSMS 210214_Eclipse_Hela_QC 1149.53210449219 2 1149.02945 2296.04435 1.3756 0.0015806 -0.080292 -9.2258E-05 1.2953 0.0014883 1149.53085594925 71.987 0.49709 71.987 71.816 72.314 0 20 9 3 0 0 0 0.00025049 1 80680 50.155 42.785 1 2808200 2511 265 2319 2352 2947 2947 ASACSTYAPETMMFLDK 17 Unmodified _ASACSTYAPETMMFLDK_ 0 0 0 Q14432 Q14432 Q14432 PDE3A cGMP-inhibited 3,5-cyclic phosphodiesterase A MULTI-MSMS 210214_Eclipse_Hela_QC 962.421997070312 2 961.92028 1921.82601 0.7564 0.00072759 -0.15611 -0.00015017 0.60029 0.00057743 962.421642836103 84.161 0.5974 84.161 83.853 84.45 0 27 11 4 0 0 0 0.0050718 1 97576 53.967 48.473 1 4869000 2512 2085 2320 2353 2948 2948 ASADLMSYCEEHAR 14 Unmodified _ASADLMSYCEEHAR_ 0 0 0 Q9UBI6 Q9UBI6 Q9UBI6 GNG12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 MULTI-MSMS 210214_Eclipse_Hela_QC 547.567077636719 3 547.232823 1638.67664 0.25817 0.00014128 -0.41127 -0.00022506 -0.1531 -8.378E-05 547.232996837487 36.652 0.59013 36.652 36.322 36.912 0 37 11 5 0 0 0 0.0005396 1 30714 42.568 37.767 1 25032000 2513 3818 2321 2354 2949 2949 ASAEGPLLGPEAAPSGEGAGSK 22 Unmodified _ASAEGPLLGPEAAPSGEGAGSK_ 0 0 0 Q9BRJ6 Q9BRJ6 Q9BRJ6 C7orf50 Uncharacterized protein C7orf50 MULTI-MSMS 210214_Eclipse_Hela_QC 977.484313964844 2 976.981626 1951.9487 1.2247 0.0011965 -0.022048 -2.154E-05 1.2027 0.001175 977.483226791962 50.406 0.59752 50.406 50.08 50.677 0 36 11 4 0 0 0 6.7304E-05 1 50311 64.675 53.769 1 10566000 2514 3237 2322 2355 2950 2950 ASAELALGENSEVLK 15 Unmodified _ASAELALGENSEVLK_ 0 0 0 P00505 P00505 P00505 GOT2 Aspartate aminotransferase, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 765.90478515625 2 765.904128 1529.7937 0.5202 0.00039842 0.01769 1.3549E-05 0.53789 0.00041197 765.904265870063 61.772 1.186 61.772 61.492 62.678 0 67 23 6 0 0 0 6.4452E-11 1 66223 128.08 107.25 1 106490000 2515 628 2323 2356 2951 2951 ASAELIEEEVAK 12 Unmodified _ASAELIEEEVAK_ 0 0 0 P12081 P12081 P12081 HARS Histidine--tRNA ligase, cytoplasmic MULTI-SECPEP 210214_Eclipse_Hela_QC 644.867126464844 2 644.835182 1287.65581 1.2557 0.0008097 1.2005 0.00077411 2.4562 0.0015838 644.835992808096 54.034 0.84433 54.034 53.441 54.285 0 31 16 2 0 0 0 4.3313E-09 1 55470 148.56 118.89 1 27471000 2516 844 2324 2357 2952 2952 ASAETPAEEQELLTQVCGDVLSTCEHR 27 Unmodified _ASAETPAEEQELLTQVCGDVLSTCEHR_ 0 0 0 P42695 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 210214_Eclipse_Hela_QC 1011.46783447266 3 1010.79749 3029.37063 1.7298 0.0017485 -0.19678 -0.0001989 1.533 0.0015496 1011.46565493678 92.966 0.59682 92.966 92.693 93.29 0 39 11 5 0 0 0 4.5449E-05 2 109802 54.658 52.294 1 5872600 2517 1276 2325 2358 2953;2954 2954 ASAETVDPASLWEY 14 Unmodified _ASAETVDPASLWEY_ 0 0 0 Q16658 Q16658 Q16658 FSCN1 Fascin MULTI-MSMS 210214_Eclipse_Hela_QC 769.855163574219 2 769.854103 1537.69365 0.83104 0.00063978 0.21139 0.00016274 1.0424 0.00080251 769.854147424695 105.95 0.39874 105.95 105.77 106.17 0 18 6 4 0 0 0 6.8097E-05 1 127782 89.047 79.615 1 20525000 2518 2243 2326 2359 2955 2955 ASAFALQEQPVVNAVIDDTTK 21 Unmodified _ASAFALQEQPVVNAVIDDTTK_ 0 0 0 P36957 P36957 P36957 DLST Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1109.5751953125 2 1109.07352 2216.13248 1.2477 0.0013838 0.23554 0.00026124 1.4832 0.001645 1109.57528378496 98.736 0.74651 98.736 98.311 99.058 0 66 14 7 0 0 0 0.00016068 1 117575 59.607 54.43 1 33877000 2519 1216 2327 2360 2956 2956 ASAFNSWFENAEEDLTDPVR 20 Unmodified _ASAFNSWFENAEEDLTDPVR_ 0 0 0 Q13813 Q13813 Q13813 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1150.0234375 2 1149.5191 2297.02366 1.8465 0.0021226 -0.38403 -0.00044145 1.4625 0.0016812 1150.02006084486 106.84 0.49759 106.84 106.71 107.21 0 24 9 5 0 0 0 1.747E-38 1 129066 179.41 174.24 1 32780000 2520 2034 2328 2361 2957 2957 ASAGHAVSIAQDDAGADDWETDPDFVNDVSEK 32 Unmodified _ASAGHAVSIAQDDAGADDWETDPDFVNDVSEK_ 0 0 0 Q14247 Q14247 Q14247 CTTN Src substrate cortactin MULTI-MSMS 210214_Eclipse_Hela_QC 1112.16027832031 3 1111.48691 3331.4389 0.75796 0.00084246 0.33088 0.00036777 1.0888 0.0012102 1111.82156115706 79.683 0.79673 79.683 79.363 80.16 0 74 15 7 0 0 0 1.3551E-09 1 91202 78.311 78.311 1 65329000 2521 2075 2329 2362 2958 2958 ASAGHVAVSSPTPETGPLQR 20 Unmodified _ASAGHVAVSSPTPETGPLQR_ 0 0 0 P42695 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 MULTI-MSMS 210214_Eclipse_Hela_QC 655.00732421875 3 654.672827 1960.99665 0.28057 0.00018368 1.0507 0.00068789 1.3313 0.00087157 654.673539251759 36.517 0.49522 36.517 36.223 36.718 0 21 9 3 0 0 0 0.0013081 2 30721 21.27 11.171 1 5502600 2522 1276 2330 2363 2959;2960 2960 ASAGPQPLLVQSCK 14 Unmodified _ASAGPQPLLVQSCK_ 0 0 0 Q9Y490 Q9Y490 Q9Y490 TLN1 Talin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 728.8876953125 2 728.384851 1454.75515 1.0237 0.00074566 0.018521 1.3491E-05 1.0422 0.00075915 728.384960163121 41.839 0.59315 41.839 41.556 42.149 0 33 11 4 0 0 0 0.0061035 1 38182 47.288 37.93 1 13560000 2523 4084 2331 2364 2961 2961 ASAGSYISALR 11 Unmodified _ASAGSYISALR_ 0 0 0 P28062 P28062 P28062 PSMB8 Proteasome subunit beta type-8 MULTI-MSMS 210214_Eclipse_Hela_QC 548.294189453125 2 548.293288 1094.57202 0.74488 0.00040841 0.65433 0.00035877 1.3992 0.00076718 548.293680709755 49.616 0.54413 49.616 49.337 49.881 0 26 10 3 0 0 0 0.002547 1 49306 61.593 49.309 1 12974000 2524 1081 2332 2365 2962 2962 ASALEQFVNSVR 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASALEQFVNSVR_ 1 0 0 Q9UNS2 Q9UNS2 Q9UNS2 COPS3 COP9 signalosome complex subunit 3 MULTI-MSMS 210214_Eclipse_Hela_QC 681.85498046875 2 681.854241 1361.69393 1.0319 0.00070359 -0.95607 -0.0006519 0.075811 5.1692E-05 681.853481198805 109.58 0.54881 109.58 109.4 109.95 0 23 10 3 0 0 0 1.8411E-41 1 132800 229.53 205.31 1 25592000 2525 3964 2333 2366 2963 2963 ASALQDMMR 9 Unmodified _ASALQDMMR_ 0 0 0 O43592 O43592 O43592 XPOT Exportin-T MULTI-MSMS 210214_Eclipse_Hela_QC 511.741638183594 2 511.741519 1021.46849 0.30825 0.00015774 -0.43761 -0.00022394 -0.12936 -6.6198E-05 511.741437104566 46.547 0.64663 46.547 46.18 46.827 0 30 12 3 0 0 0 9.1542E-06 1 44768 136.8 111.9 1 17026000 2526 314 2334 2367 2964 2964 ASANMDLMR 9 Unmodified _ASANMDLMR_ 0 0 0 P28838 P28838 P28838 LAP3 Cytosol aminopeptidase MULTI-MSMS 210214_Eclipse_Hela_QC 504.734130859375 2 504.733694 1007.45284 0.18407 9.2907E-05 0.040418 2.04E-05 0.22449 0.00011331 504.733714796159 35.02 0.59211 35.02 34.75 35.343 0 19 11 2 0 0 0 0.00037372 1 28590 105.57 63.093 1 9438000 2527 1094 2335 2368 2965 2965 ASAPESGLLSK 11 Unmodified _ASAPESGLLSK_ 0 0 0 Q96CN7 Q96CN7 Q96CN7 ISOC1 Isochorismatase domain-containing protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 530.287475585938 2 530.287671 1058.56079 0.27843 0.00014765 0.53095 0.00028156 0.80938 0.00042921 530.287487120765 31.43 0.64664 31.43 31.122 31.769 0 26 12 3 0 0 0 0.00027568 1 23425 87.485 59.856 1 13303000 2528 2990 2336 2369 2966 2966 ASAPSPNAQVACDHCLK 17 Unmodified _ASAPSPNAQVACDHCLK_ 0 0 0 Q14258 Q14258 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 MULTI-MSMS 210214_Eclipse_Hela_QC 609.616394042969 3 609.282177 1824.8247 0.062215 3.7907E-05 0.0575 3.5034E-05 0.11972 7.2941E-05 609.616617356895 26.406 0.39868 26.406 26.208 26.607 0 26 7 5 0 0 0 2.4843E-05 1 16257 71.601 65.941 1 21908000 2529 2078 2337 2370 2967 2967 ASAPSPNAQVACDHCLK 17 Unmodified _ASAPSPNAQVACDHCLK_ 0 0 0 Q14258 Q14258 Q14258 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 MULTI-MSMS 210214_Eclipse_Hela_QC 913.921875 2 913.419627 1824.8247 0.65379 0.00059718 0.024613 2.2482E-05 0.6784 0.00061967 913.921229425136 26.374 0.34866 26.374 26.208 26.557 0 14 6 3 0 0 0 0.00024375 1 16297 66.498 63.275 1 6772600 2530 2078 2337 2370 2968 2968 ASAQQENSSTCIGSAIK 17 Unmodified _ASAQQENSSTCIGSAIK_ 0 0 0 Q9NXV6 Q9NXV6 Q9NXV6 CDKN2AIP CDKN2A-interacting protein MULTI-MSMS 210214_Eclipse_Hela_QC 876.919738769531 2 876.415065 1750.81558 1.2002 0.0010519 -0.17755 -0.00015561 1.0226 0.00089625 876.415068412452 30.713 0.4492 30.713 30.424 30.873 0 25 8 4 0 0 0 0.00011229 1 22367 77.912 66.593 1 8499200 2531 3731 2338 2371 2969 2969 ASASGSGAQVGGPISSGSSASSVTVTR 27 Unmodified _ASASGSGAQVGGPISSGSSASSVTVTR_ 0 0 0 P02545 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 210214_Eclipse_Hela_QC 1183.08386230469 2 1183.08313 2364.15171 1.2277 0.0014525 -0.45325 -0.00053623 0.77447 0.00091626 1183.58409394549 45.913 0.79634 45.913 45.582 46.379 0 67 15 6 0 0 0 1.2179E-108 1 43896 236.02 223.66 1 80938000 2532 640 2339 2372 2970 2970 ASASGSGAQVGGPISSGSSASSVTVTR 27 Unmodified _ASASGSGAQVGGPISSGSSASSVTVTR_ 0 0 0 P02545 P02545 P02545 LMNA Prelamin-A/C;Lamin-A/C MULTI-MSMS 210214_Eclipse_Hela_QC 789.392395019531 3 789.057846 2364.15171 1.1367 0.00089696 -0.10307 -8.1328E-05 1.0337 0.00081563 789.057934997012 45.95 0.49809 45.95 45.682 46.18 0 26 9 4 0 0 0 0.024361 1 44085 8.3148 5.5528 1 7032300 2533 640 2339 2372 2971 2971 ASASYHISNLLEK 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASASYHISNLLEK_ 1 0 0 Q86VP6 Q86VP6 Q86VP6 CAND1 Cullin-associated NEDD8-dissociated protein 1 MULTI-MSMS 210214_Eclipse_Hela_QC 737.881164550781 2 737.880456 1473.74636 1.1842 0.00087379 1.5291 0.0011283 2.7133 0.0020021 737.882627799977 71.23 0.89706 71.23 70.82 71.717 0 66 17 5 0 0 0 4.6264E-48 1 79619 229.54 167.89 1 50803000 2534 2587 2340 2373 2972 2972 ASAVSELSPR 10 Unmodified _ASAVSELSPR_ 0 0 0 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 509.270812988281 2 508.772188 1015.52982 0.19603 9.9736E-05 -1.3604 -0.00069212 -1.1643 -0.00059239 508.772025454792 29.57 1.6384 29.57 28.487 30.125 0 59 33 3 0 0 0 0.00014702 2 20518 104.2 76.897 1 17095000 2535 4021 2341 2374 2973;2974 2974 ASAVSPANLPAVLLQPR 17 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASAVSPANLPAVLLQPR_ 1 0 0 P51610 P51610 P51610 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 MULTI-MSMS 210214_Eclipse_Hela_QC 873.499145507812 2 873.499061 1744.98357 1.1048 0.00096501 -0.61056 -0.00053332 0.49421 0.00043169 873.498752725696 109.23 0.2987 109.23 109.1 109.4 0 13 5 3 0 0 0 3.6418E-35 2 132406 172.17 156.31 1 32551000 2536 1447 2342 2375 2975;2976 2976 ASAYEALEK 9 Unmodified _ASAYEALEK_ 0 0 0 Q15785 Q15785 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 MSMS 210214_Eclipse_Hela_QC 491.248504638672 2 491.248015 980.481476 NaN NaN NaN NaN NaN NaN NaN 28.929 1 28.929 28.429 29.429 0 0 0 0 0.0071755 1 19880 88.177 54.004 1 2537 2214 2343 2376 2977 2977 ASAYVFASPGCK 12 Unmodified _ASAYVFASPGCK_ 0 0 0 O95861 O95861 O95861 BPNT1 3(2),5-bisphosphate nucleotidase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 629.299926757812 2 629.300255 1256.58596 0.45319 0.00028519 -2.4021 -0.0015116 -1.9489 -0.0012264 629.298055061485 42.493 0.94603 42.493 42.149 43.095 0 46 18 4 0 0 0 2.631E-05 1 39128 101.38 88.591 1 11880000 2538 604 2344 2377 2978 2978 ASDAFHFFQSGQAK 14 Unmodified _ASDAFHFFQSGQAK_ 0 0 0 O75153 O75153 O75153 CLUH Clustered mitochondria protein homolog MULTI-MSMS 210214_Eclipse_Hela_QC 514.245178222656 3 514.244157 1539.71064 0.35371 0.00018189 1.1078 0.0005697 1.4616 0.0007516 514.244805636123 52.917 0.89747 52.917 52.494 53.391 0 24 17 2 0 0 0 0.0059435 1 54045 31.58 20.475 1 10797000 2539 427 2345 2378 2979 2979 ASDPGLPAEEPK 12 Unmodified _ASDPGLPAEEPK_ 0 0 0 P27708 P27708 P27708 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase MULTI-MSMS 210214_Eclipse_Hela_QC 605.800842285156 2 605.801143 1209.58773 0.42379 0.00025673 0.63784 0.0003864 1.0616 0.00064314 605.801420456122 31.106 0.89728 31.106 30.524 31.421 0 45 17 4 0 0 0 0.0024597 1 22861 54.539 43.732 1 19359000 2540 1077 2346 2379 2980 2980 ASEAGEVPFNHEILR 15 Unmodified _ASEAGEVPFNHEILR_ 0 0 0 Q7L5N1 Q7L5N1 Q7L5N1 COPS6 COP9 signalosome complex subunit 6 MULTI-MSMS 210214_Eclipse_Hela_QC 556.949157714844 3 556.949521 1667.82673 0.45448 0.00025312 -0.77805 -0.00043333 -0.32357 -0.00018021 556.948752009808 52.849 0.6978 52.849 52.444 53.142 0 39 12 4 0 0 0 0.00027536 3 53832 60.549 54.112 1 15862000 2541 2523 2347 2380 2981;2982;2983 2983 ASEAHCHYVVVK 12 Unmodified _ASEAHCHYVVVK_ 0 0 0 Q15067 Q15067 Q15067 ACOX1 Peroxisomal acyl-coenzyme A oxidase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 700.3447265625 2 700.342986 1398.67142 1.4885 0.0010425 0.56503 0.00039572 2.0536 0.0014382 700.343348651796 18.946 0.29868 18.946 18.772 19.07 0 10 5 2 0 0 0 0.02261 1 5604 37.476 20.936 1 3500300 2542 2150 2348 2381 2984 2984 ASEAQPPVAR 10 Unmodified _ASEAQPPVAR_ 0 0 0 Q13428 Q13428 Q13428 TCOF1 Treacle protein MULTI-MSMS 210214_Eclipse_Hela_QC 513.272277832031 2 513.272355 1024.53016 -0.11544 -5.925E-05 0.30923 0.00015872 0.1938 9.947E-05 513.27232811063 19.263 0.54752 19.263 18.921 19.469 0 16 10 2 0 0 0 0.0014242 1 6092 74.255 61.213 1 5842100 2543 1986 2349 2382 2985 2985 ASEAVEDTFR 10 Unmodified _ASEAVEDTFR_ 0 0 0 Q6UVK1 Q6UVK1 Q6UVK1 CSPG4 Chondroitin sulfate proteoglycan 4 MULTI-SECPEP 210214_Eclipse_Hela_QC 562.239990234375 2 562.76456 1123.51457 0.32547 0.00018316 -0.45654 -0.00025692 -0.13107 -7.3761E-05 562.764548697622 32.861 0.8697 32.861 32.261 33.131 0 30 17 2 0 0 0 0.041805 1 25660 71.451 56.3 1 6721800 2544 2476 2350 2383 2986 2986 ASEIMVDDEELAQHPATTEDIR 22 Unmodified _ASEIMVDDEELAQHPATTEDIR_ 0 0 0 Q8IY81 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 MULTI-MSMS 210214_Eclipse_Hela_QC 824.053771972656 3 824.051592 2469.13295 1.1308 0.00093183 0.17826 0.0001469 1.3091 0.0010787 824.385989255191 63.488 0.99519 63.488 62.926 63.921 0 58 19 5 0 0 0 2.4664E-10 1 68715 103.26 95.425 1 27793000 2545 2645 2351 2384 2987 2987 ASELHLLETPLVVK 14 Unmodified _ASELHLLETPLVVK_ 0 0 0 Q8WYP5 Q8WYP5 Q8WYP5 AHCTF1 Protein ELYS MULTI-MSMS 210214_Eclipse_Hela_QC 516.971740722656 3 516.971374 1547.89229 0.68214 0.00035265 0.21833 0.00011287 0.90047 0.00046552 516.971444568497 75.91 0.42834 75.91 75.701 76.129 0 26 8 4 0 0 0 0.0065394 1 86119 37.366 30.68 1 4859400 2546 2868 2352 2385 2988 2988 ASELNPESIYSVFK 14 Unmodified _ASELNPESIYSVFK_ 0 0 0 Q6PGP7 Q6PGP7 Q6PGP7 TTC37 Tetratricopeptide repeat protein 37 MULTI-MSMS 210214_Eclipse_Hela_QC 792.4013671875 2 792.401221 1582.78789 1.3322 0.0010557 -1.1712 -0.00092805 0.16104 0.00012761 792.902040308877 94.562 0.59146 94.562 94.284 94.875 0 31 11 4 0 0 0 0.036026 1 112211 33.89 23.659 1 4966600 2547 2459 2353 2386 2989 2989 ASENAIVWK 9 Unmodified _ASENAIVWK_ 0 0 0 Q96CW1 Q96CW1 Q96CW1 AP2M1 AP-2 complex subunit mu MSMS 210214_Eclipse_Hela_QC 509.271514892578 2 509.271824 1016.5291 NaN NaN NaN NaN NaN NaN NaN 39.164 1 39.164 38.664 39.664 0 0 0 0 0.0075287 1 34476 121.09 85.735 1 2548 2994 2354 2387 2990 2990 ASEQIYGTPSSSPYECLR 18 Unmodified _ASEQIYGTPSSSPYECLR_ 0 0 0 Q14203 Q14203 Q14203 DCTN1 Dynactin subunit 1 MULTI-MSMS 210214_Eclipse_Hela_QC 1022.96966552734 2 1022.96766 2043.92077 1.4553 0.0014887 -0.52512 -0.00053718 0.93015 0.00095151 1023.46840038234 61.17 0.49639 61.17 60.896 61.392 0 34 9 5 0 0 0 0.00020865 1 65489 64.65 63.063 1 9812800 2549 2069 2355 2388 2991 2991 ASESISLK 8 Unmodified _ASESISLK_ 0 0 0 Q8WWI1 Q8WWI1 Q8WWI1 LMO7 LIM domain only protein 7 MULTI-MSMS 210214_Eclipse_Hela_QC 417.731750488281 2 417.732 833.449448 -0.29206 -0.000122 0.078218 3.2674E-05 -0.21384 -8.9327E-05 417.731806224874 25.437 0.54755 25.437 25.263 25.811 0 17 10 3 0 0 0 0.035996 1 14989 47.082 16.578 1 8872400 2550 2850 2356 2389 2992 2992 ASESSKPWPDATYGTGSASR 20 Unmodified _ASESSKPWPDATYGTGSASR_ 0 0 1 Q9Y2W1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 MULTI-MSMS 210214_Eclipse_Hela_QC 685.987243652344 3 685.65198 2053.93411 0.40075 0.00027478 0.05363 3.6772E-05 0.45438 0.00031155 685.986453426983 36.218 0.79315 36.218 35.925 36.718 0 49 15 4 0 0 0 2.7353E-05 1 30117 74.047 70.554 1 23516000 2551 4021 2357 2390 2993 2993 ASEVEEILDGNDEK 14 Unmodified _ASEVEEILDGNDEK_ 0 0 0 Q12824 Q12824 Q12824 SMARCB1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 MULTI-MSMS 210214_Eclipse_Hela_QC 774.35693359375 2 774.357207 1546.69986 0.60214 0.00046627 -0.037664 -2.9166E-05 0.56447 0.0004371 774.357163013027 64.391 0.58524 64.391 64.22 64.805 0 26 12 3 0 0 0 0.00055955 1 70178 64.199 53.841 1 7680600 2552 1914 2358 2391 2994 2994 ASEVFCWGQNK 11 Unmodified _ASEVFCWGQNK_ 0 0 0 Q5GLZ8 Q5GLZ8 Q5GLZ8 HERC4 Probable E3 ubiquitin-protein ligase HERC4 MULTI-MSMS 210214_Eclipse_Hela_QC 663.301635742188 2 663.300787 1324.58702 0.89625 0.00059449 0.58685 0.00038926 1.4831 0.00098374 663.301277173846 52.582 0.49796 52.582 52.295 52.793 0 15 9 2 0 0 0 0.0086779 1 53460 50.607 39.117 1 1738300 2553 2318 2359 2392 2995 2995 ASEVFLQR 8 Unmodified _ASEVFLQR_ 0 0 0 Q9H0A0 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 210214_Eclipse_Hela_QC 475.2587890625 2 475.258717 948.50288 0.0045128 2.1447E-06 0.13484 6.4084E-05 0.13935 6.6229E-05 475.258734467798 35.07 0.64176 35.07 34.75 35.392 0 21 12 2 0 0 0 0.0071601 1 28524 73.324 49.137 1 11351000 2554 3406 2360 2393 2996 2996 ASEVMGPVEAAPEYR 15 Unmodified _ASEVMGPVEAAPEYR_ 0 0 0 Q8WWY3 Q8WWY3 Q8WWY3 PRPF31 U4/U6 small nuclear ribonucleoprotein Prp31 MULTI-MSMS 210214_Eclipse_Hela_QC 803.382629394531 2 803.382505 1604.75046 1.0017 0.00080477 0.12961 0.00010412 1.1313 0.00090889 803.382444930501 54.808 0.54755 54.808 54.526 55.073 0 27 10 3 0 0 0 4.5814E-05 1 56558 90.614 84.51 1 10551000 2555 2855 2361 2394 2997 2997 ASEWVQQVSGLMDGK 15 Unmodified _ASEWVQQVSGLMDGK_ 0 0 0 P49588 P49588 P49588 AARS Alanine--tRNA ligase, cytoplasmic MULTI-MSMS 210214_Eclipse_Hela_QC 817.896850585938 2 817.89578 1633.77701 0.9441 0.00077218 -0.63134 -0.00051637 0.31276 0.00025581 817.895476616745 86.651 1.4416 86.651 85.941 87.383 0 91 27 5 0 0 0 1.2415E-38 2 101187 197.43 179.17 1 72135000 2556 1377 2362 2395 2998;2999 2999 ASFASASAEVGK 12 Unmodified _ASFASASAEVGK_ 0 0 0 O43159 O43159 O43159 RRP8 Ribosomal RNA-processing protein 8 MULTI-MSMS 210214_Eclipse_Hela_QC 562.782897949219 2 562.782753 1123.55095 0.58047 0.00032668 -0.043651 -2.4566E-05 0.53682 0.00030211 562.782495739116 29.72 0.54663 29.72 29.479 30.026 0 20 10 3 0 0 0 0.0014357 1 21018 62.271 45.031 1 5194500 2557 285 2363 2396 3000 3000 ASFENNCEIGCFAK 14 Unmodified _ASFENNCEIGCFAK_ 0 0 0 P56537 P56537 P56537 EIF6 Eukaryotic translation initiation factor 6 MULTI-MSMS 210214_Eclipse_Hela_QC 823.850463867188 2 823.850515 1645.68648 1.9269 0.0015875 -0.11506 -9.4788E-05 1.8119 0.0014927 823.850734285042 55.448 0.79582 55.448 55.173 55.969 0 67 15 7 0 0 0 3.2244E-09 1 57333 120.09 109.86 1 75157000 2558 1557 2364 2397 3001 3001 ASFIPPLEK 9 Unmodified _ASFIPPLEK_ 0 0 0 CON__Q95121 CON__Q95121 CON__Q95121 MULTI-MSMS 210214_Eclipse_Hela_QC 501.288269042969 2 501.286943 1000.55933 0.41804 0.00020956 0.33347 0.00016716 0.75151 0.00037672 501.287060406243 59.825 0.99535 59.825 59.353 60.349 0 53 19 4 0 0 0 0.046467 1 63415 37.191 28.419 1 45284000 + 2559 110 2365 2398 3002 3002 ASFITPVPGGVGPMTVAMLMQSTVESAK 28 Unmodified _ASFITPVPGGVGPMTVAMLMQSTVESAK_ 0 0 0 P11586 P11586 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 1404.72326660156 2 1403.71302 2805.41149 2.7658 0.0038824 -1.6666 -0.0023395 1.0992 0.0015429 1404.21204150633 110.25 0.34882 110.25 110.1 110.45 0 34 6 7 0 0 0 1.5953E-17 1 133725 145.48 137.77 1 42424000 2560 837 2366 2399 3003 3003 ASFITPVPGGVGPMTVAMLMQSTVESAK 28 Unmodified _ASFITPVPGGVGPMTVAMLMQSTVESAK_ 0 0 0 P11586 P11586 P11586 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed MULTI-MSMS 210214_Eclipse_Hela_QC 936.478820800781 3 936.144441 2805.41149 1.7019 0.0015932 -1.1848 -0.0011092 0.5171 0.00048408 936.477863140934 110.23 0.34882 110.23 110.1 110.45 0 23 6 6 0 0 0 2.0225E-05 1 133783 60.104 53.943 1 5857600 2561 837 2366 2399 3004 3004 ASFNHFDK 8 Unmodified _ASFNHFDK_ 0 0 0 O43707 O43707 O43707 ACTN4 Alpha-actinin-4 MULTI-MSMS 210214_Eclipse_Hela_QC 483.227325439453 2 483.227417 964.44028 0.21829 0.00010548 0.16267 7.8609E-05 0.38096 0.00018409 483.227387553135 20.737 0.74686 20.737 20.414 21.161 0 40 14 4 0 0 0 0.00030333 1 8091 133.05 88.441 1 81219000 2562 329 2367 2400 3005 3005 ASFPQGPIGGANR 13 Unmodified _ASFPQGPIGGANR_ 0 0 0 O75608 O75608 O75608 LYPLA1 Acyl-protein thioesterase 1 MULTI-MSMS 210214_Eclipse_Hela_QC 636.328796386719 2 636.328193 1270.64183 0.29567 0.00018814 0.31877 0.00020284 0.61444 0.00039099 636.328442314346 41.382 0.99422 41.382 40.91 41.904 0 45 19 3 0 0 0 0.00024224 2 37453 74.92 68.329 1 40941000 2563 470 2368 2401 3006;3007 3006 ASFSVLGDILGSAMR 15 Unmodified _ASFSVLGDILGSAMR_ 0 0 0 CON__ENSEMBL:ENSBTAP00000024146 CON__ENSEMBL:ENSBTAP00000024146 CON__ENSEMBL:ENSBTAP00000024146 MULTI-MSMS 210214_Eclipse_Hela_QC 762.399047851562 2 762.397958 1522.78136 1.3534 0.0010318 -0.18506 -0.00014109 1.1683 0.00089074 762.39785585069 107.48 0.29814 107.48 107.31 107.61 0 18 5 5 0 0 0 8.1622E-38 2 129934 190.53 172.67 1 54918000 + 2564 38 2369 2402 3008;3009 3009 ASFVDEHTVCGVAK 14 Unmodified _ASFVDEHTVCGVAK_ 0 0 0 Q9NNW7 Q9NNW7 Q9NNW7 TXNRD2 Thioredoxin reductase 2, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 507.244750976562 3 507.245169 1518.71368 -0.023339 -1.1839E-05 -0.47087 -0.00023885 -0.49421 -0.00025069 507.579484443016 38.737 0.49353 38.737 38.491 38.984 0 27 9 4 0 0 0 0.011966 1 33860 27.938 24.622 1 9859400 2565 3572 2370 2403 3010 3010 ASFVDEHTVCGVAK 14 Unmodified _ASFVDEHTVCGVAK_ 0 0 0 Q9NNW7 Q9NNW7 Q9NNW7 TXNRD2 Thioredoxin reductase 2, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 760.364807128906 2 760.364115 1518.71368 0.51853 0.00039427 0.74286 0.00056485 1.2614 0.00095912 760.364762092333 38.734 0.4478 38.734 38.586 39.034 0 13 8 2 0 0 0 0.048901 1 33891 31.843 24.714 1 3474900 2566 3572 2370 2403 3011 3011 ASFVTEVLAHSGR 13 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASFVTEVLAHSGR_ 1 0 0 O43264 O43264 O43264 ZW10 Centromere/kinetochore protein zw10 homolog MULTI-MSMS 210214_Eclipse_Hela_QC 708.36767578125 2 708.367515 1414.72048 1.2249 0.00086768 -0.53802 -0.00038111 0.68689 0.00048657 708.367134126573 105.22 0.44862 105.22 104.98 105.43 0 14 8 2 0 0 0 2.301E-14 1 126810 149.33 131.47 1 13987000 2567 294 2371 2404 3012 3012 ASGANYSFHK 10 Unmodified _ASGANYSFHK_ 0 0 0 Q9UJU6 Q9UJU6 Q9UJU6 DBNL Drebrin-like protein MULTI-MSMS 210214_Eclipse_Hela_QC 541.256774902344 2 541.256705 1080.49886 -0.032108 -1.7379E-05 -0.099237 -5.3713E-05 -0.13135 -7.1092E-05 541.256569210955 19.27 0.59731 19.27 19.07 19.668 0 30 11 4 0 0 0 0.00034263 1 6039 93.267 79.343 1 10149000 2568 3896 2372 2405 3013 3013 ASGDLIPWTVSEQFQDPDFGGLSGGR 26 Unmodified _ASGDLIPWTVSEQFQDPDFGGLSGGR_ 0 0 0 Q9H0A0 Q9H0A0 Q9H0A0 NAT10 N-acetyltransferase 10 MULTI-MSMS 210214_Eclipse_Hela_QC 1369.15270996094 2 1368.64864 2735.28272 1.9056 0.0026081 0.27731 0.00037954 2.1829 0.0029876 1369.15029415706 107.43 0.24837 107.43 107.31 107.56 0 17 4 5 0 0 0 2.2232E-14 1 129933 109.04 104.87 1 30083000 2569 3406 2373 2406 3014 3014 ASGEMASAQYITAALR 16 Unmodified _ASGEMASAQYITAALR_ 0 0 0 P54578 P54578 P54578 USP14 Ubiquitin carboxyl-terminal hydrolase 14 MULTI-MSMS 210214_Eclipse_Hela_QC 820.910034179688 2 820.409054 1638.80356 1.4607 0.0011984 -0.2951 -0.0002421 1.1656 0.0009563 820.408968383653 77.298 0.69629 77.298 76.925 77.622 0 47 13 4 0 0 0 6.0373E-09 2 87858 117.79 103.89 1 46335000 2570 1516 2374 2407 3015;3016 3015 ASGFEESMK 9 Unmodified _ASGFEESMK_ 0 0 0 Q6P2Q9 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 MULTI-MSMS 210214_Eclipse_Hela_QC 493.217956542969 2 493.2184 984.422247 -0.9004 -0.00044409 0.56145 0.00027692 -0.33896 -0.00016718 493.218668429768 25.236 0.44741 25.236 25.015 25.462 0 16 8 3 0 0 0 0.00073172 1 14575 91.069 40.942 1 17552000 2571 2450 2375 2408 3017 3017 ASGGLPQFGDEYDFYR 16 Unmodified _ASGGLPQFGDEYDFYR_ 0 0 0 Q01780 Q01780 Q01780 EXOSC10 Exosome component 10 MULTI-MSMS 210214_Eclipse_Hela_QC 911.409362792969 2 911.407566 1820.80058 1.2019 0.0010955 -0.089692 -8.1746E-05 1.1122 0.0010137 911.407280486409 86.799 0.64572 86.799 86.489 87.134 0 39 12 4 0 0 0 0.0022825 1 101160 50.207 43.975 1 10762000 2572 1820 2376 2409 3018 3018 ASGGTSEFITGK 12 Unmodified _ASGGTSEFITGK_ 0 0 0 O00534 O00534 O00534 VWA5A von Willebrand factor A domain-containing protein 5A MULTI-MSMS 210214_Eclipse_Hela_QC 578.2900390625 2 577.788035 1153.56152 0.43233 0.00024979 1.6023 0.0009258 2.0346 0.0011756 578.290812766459 30.212 0.64664 30.212 29.877 30.524 0 30 12 3 0 0 0 0.00040462 2 21647 72.848 58.845 1 7678300 2573 169 2377 2410 3019;3020 3019 ASGNYATVISHNPETK 16 Unmodified _ASGNYATVISHNPETK_ 0 0 0 P62917 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 210214_Eclipse_Hela_QC 845.417053222656 2 844.915558 1687.81656 0.83307 0.00070387 -0.10458 -8.8361E-05 0.72849 0.00061551 844.915528136094 29.305 1.082 29.305 28.894 29.976 0 70 21 6 0 0 0 8.5248E-69 2 20282 245.18 225.92 1 131590000 2574 1697 2378 2411 3021;3022 3022 ASGNYATVISHNPETK 16 Unmodified _ASGNYATVISHNPETK_ 0 0 0 P62917 P62917 P62917 RPL8 60S ribosomal protein L8 MULTI-MSMS 210214_Eclipse_Hela_QC 563.2763671875 3 563.612797 1687.81656 0.37376 0.00021066 -0.013996 -7.8881E-06 0.35977 0.00020277 563.612969232902 29.305 1.1317 29.305 28.844 29.976 0 76 22 6 0 0 0 1.032E-56 3 20533 174.39 161.84 1 422470000 2575 1697 2378 2411 3023;3024;3025 3024 ASGPGLNTTGVPASLPVEFTIDAK 24 Unmodified _ASGPGLNTTGVPASLPVEFTIDAK_ 0 0 0 P21333 P21333 P21333 FLNA Filamin-A MULTI-MSMS 210214_Eclipse_Hela_QC 1172.11999511719 2 1171.61555 2341.21654 1.2239 0.001434 -0.09633 -0.00011286 1.1276 0.0013211 1172.11677879512 103.41 1.0944 103.41 102.94 104.03 0 77 21 5 0 0 0 0.00078733 1 123917 67.416 62.702 1 127070000 2576 995 2379 2412 3026 3026 ASGPPVSELITK 12 Unmodified _ASGPPVSELITK_ 0 0 0 P16403;P10412;P16402 P16403 P16403 HIST1H1C;HIST1H1E;HIST1H1D Histone H1.2;Histone H1.4;Histone H1.3 MULTI-MSMS 210214_Eclipse_Hela_QC 599.837219238281 2 599.837528 1197.6605 0.86931 0.00052145 -0.87536 -0.00052507 -0.006048 -3.6278E-06 599.837329851354 52.784 3.3756 52.784 52.145 55.521 0 198 67 6 0 0 0 6.3738E-09 3 54109 132.85 102.29 1 2012300000 2577 919 2380 2413 3027;3028;3029 3028 ASGQAFELILSPR 13 Unmodified _ASGQAFELILSPR_ 0 0 0 P16949 P16949 P16949 STMN1 Stathmin MULTI-MSMS 210214_Eclipse_Hela_QC 694.882629394531 2 694.880259 1387.74596 0.85526 0.0005943 0.17082 0.0001187 1.0261 0.000713 694.880464903015 82.881 1.1829 82.881 82.57 83.753 0 84 24 5 0 0 0 4.9684E-06 3 95616 109.39 98.865 1 111090000 2578 923 2381 2414 3030;3031;3032 3030 ASGVAVSDGVIK 12 Acetyl (Protein N-term) _(Acetyl (Protein N-term))ASGVAVSDGVIK_ 1 0 0 P23528 P23528 P23528 CFL1 Cofilin-1 MULTI-MSMS 210214_Eclipse_Hela_QC 572.811950683594 2 572.814053 1143.61355 0.65578 0.00037564 -0.22964 -0.00013154 0.42614 0.0002441 572.813792688726 65.825 0.99535 65.825 65.552 66.548 0 67 19 5 0 0 0 7.2133E-05 1 71854 90.05 63.782 1 117480000 2579 1027 2382 2415 3033 3033 ASHNNTQIQVVSASNEPLAFASCGTEGFR 29 Unmodified _ASHNNTQIQVVSASNEPLAFASCGTEGFR_ 0 0 0 P82912 P82912 P82912 MRPS11 28S ribosomal protein S11, mitochondrial MULTI-MSMS 210214_Eclipse_Hela_QC 1032.48986816406 3 1031.48786 3091.44176 1.1249 0.0011603 -0.10949 -0.00011293 1.0154 0.0010474 1031.82200864378 78.145 0.59782 78.145 77.92 78.518 0 36 11 4 0 0 0 1.1112E-07 1 89302 71.085 68.406 1 15372000 2580 1766 2383 2416 3034 3034 ASHTAPQVLFSHR 13 Unmodified _ASHTAPQVLFSHR_ 0 0 0 O15144 O15144 O15144 ARPC2 Actin-related protein 2/3 complex subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 484.256225585938 3 484.256508 1449.7477 0.17706 8.5744E-05 0.052206 2.5281E-05 0.22927 0.00011102 484.256403055243 25.487 0.64664 25.487 25.263 25.91 0 36 12 5 0 0 0 7.0415E-14 1 14978 147.26 138.23 1 55613000 2581 243 2384 2417 3035 3035 ASHTAPQVLFSHR 13 Unmodified _ASHTAPQVLFSHR_ 0 0 0 O15144 O15144 O15144 ARPC2 Actin-related protein 2/3 complex subunit 2 MULTI-MSMS 210214_Eclipse_Hela_QC 725.880920410156 2 725.881124 1449.7477 0.64139 0.00046557 0.20534 0.00014905 0.84672 0.00061462 726.382783579697 25.493 0.2987 25.493 25.313 25.611 0 13 5 3 0 0 0 5.7744E-09 1 15004 145.46 137.9 1 13671000 2582 243 2384 2417 3036 3036 ASHTLLPSHR 10 Unmodified _ASHTLLPSHR_ 0 0 0 Q9UKV3 Q9UKV3 Q9UKV3 ACIN1 Apoptotic chromatin condensation inducer in the nucleus MULTI-MSMS 210214_Eclipse_Hela_QC 560.309936523438 2 559.806897 1117.59924 0.88003 0.00049264 -0.89314 -0.00049999 -0.013114 -7.3415E-06 559.806363124615 18.797 0.881 18.797 18.289 19.17 0 64 20 5 0 0 0 2.2632E-07 1 4919 143.01 72.091 1 98607000 2583 3917 2385 2418 3037 3037 ASIHEAWTDGK 11 Unmodified _ASIHEAWTDGK_ 0 0 0 P12814;O43707 P12814;O43707 O43707 ACTN1;ACTN4 Alpha-actinin-1;Alpha-actinin-4 MULTI-MSMS 210214_Eclipse_Hela_QC 405.531127929688 3 405.531527 1213.57275 -0.65521 -0.00026571 0.40895 0.00016584 -0.24627 -9.9869E-05 405.531651831309 24.99 0.59709 24.99 24.766 25.363 0 26 11 4 0 0 0 1.1673E-05 1 14225 85.729 58.44 1 56839000 2584 329;853 2386 2419 3038 3038 ASIHEAWTDGK 11 Unmodified _ASIHEAWTDGK_ 0 0 0 P12814;O43707 P12814;O43707 O43707 ACTN1;ACTN4 Alpha-actinin-1;Alpha-actinin-4 MSMS 210214_Eclipse_Hela_QC 607.793395996094 2 607.793652 1213.57275 NaN NaN NaN NaN NaN NaN NaN 24.958 1 24.958 24.458 25.458 0 0 0 0 1.5267E-26 1 14207 195.36 152.06 1 2585 329;853 2386 2419 3039 3039 ASILNTWISLK 11 Unmodified _ASILNTWISLK_ 0 0 0 P22234 P22234 P22234 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase MULTI-MSMS 210214_Eclipse_Hela_QC 623.364196777344 2 623.363713 1244.71287 1.4655 0.00091356 -0.11435 -7.128E-05 1.3512 0.00084228 623.363627415076 94.287 0.98945 94.287 93.787 94.776 0 57 19 4 0 0 0 0.01508 1 111349 46.406 38.761 1 32670000 2586 1007 2387 2420 3040 3040 ASINMLR 7 Unmodified _ASINMLR_ 0 0 0 P18124 P18124 P18124 RPL7 60S ribosomal protein L7 MULTI-MSMS 210214_Eclipse_Hela_QC 402.723449707031 2 402.723455 803.432358 -0.10759 -4.3331E-05 0.19227 7.7432E-05 0.084677 3.4101E-05 402.723543029841 33.3 1.2333 33.3 32.982 34.215 0 72 24 5 0 0 0 0.0031766 1 25927 111.69 27.329 1 154840000 2587 951 2388 2421 3041 3041 ASIPFSVVGSNQLIEAK 17 Unmodified _ASIPFSVVGSNQLIEAK_ 0 0 0 Q15019 Q15019 Q15019 SEPT2 Septin-2 MULTI-MSMS 210214_Eclipse_Hela_QC 880.986694335938 2 880.483076 1758.9516 1.2144 0.0010693 0.25822 0.00022736 1.4726 0.0012966 880.984842753021 89.289 0.69606 89.289 88.964 89.66 0